View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10485_low_15 (Length: 217)
Name: NF10485_low_15
Description: NF10485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10485_low_15 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 48 - 203
Target Start/End: Original strand, 10381470 - 10381625
Alignment:
| Q |
48 |
acgaacaatgtctggtacttctgtttcattgtaaaactccttcaaacaaattgagcattgttccattgaacaagcggtatctgcattgtcctccactttg |
147 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10381470 |
acgaacaatggctggtacttctgtttcattgtaaaactccttcaaacaaattgagcattgttccattgaacaagcggtatctgcattgtcgtccactttg |
10381569 |
T |
|
| Q |
148 |
atcttctccaacgaattcataacattcgttacatcatgaaccgtaacattcatctc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10381570 |
atcttctccaacgaattcataacattcgttacatcatgaaccgtaacactcatctc |
10381625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University