View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10486_high_3 (Length: 527)

Name: NF10486_high_3
Description: NF10486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10486_high_3
NF10486_high_3
[»] chr1 (14 HSPs)
chr1 (16-515)||(1675238-1675738)
chr1 (58-120)||(27910246-27910308)
chr1 (57-120)||(25264857-25264920)
chr1 (58-120)||(20033791-20033853)
chr1 (60-116)||(17443247-17443303)
chr1 (57-105)||(34104262-34104310)
chr1 (57-211)||(52974409-52974561)
chr1 (60-109)||(10063677-10063726)
chr1 (200-313)||(13220850-13220962)
chr1 (59-104)||(25425696-25425741)
chr1 (66-110)||(8746845-8746889)
chr1 (70-116)||(16114133-16114179)
chr1 (173-254)||(36758754-36758835)
chr1 (75-139)||(10827984-10828048)
[»] chr4 (33 HSPs)
chr4 (86-380)||(17380405-17380698)
chr4 (60-118)||(9264016-9264074)
chr4 (60-120)||(10087833-10087893)
chr4 (69-120)||(1832589-1832640)
chr4 (60-118)||(5529336-5529394)
chr4 (57-139)||(12587917-12587998)
chr4 (61-111)||(19547737-19547787)
chr4 (58-120)||(20316834-20316896)
chr4 (69-118)||(11520151-11520200)
chr4 (60-120)||(8139840-8139900)
chr4 (60-120)||(15049198-15049258)
chr4 (60-120)||(15105166-15105226)
chr4 (69-311)||(20314609-20314844)
chr4 (66-110)||(28572466-28572510)
chr4 (65-234)||(19084445-19084612)
chr4 (58-120)||(7613096-7613158)
chr4 (60-110)||(12216154-12216204)
chr4 (59-109)||(18746354-18746404)
chr4 (57-120)||(17661334-17661396)
chr4 (60-111)||(23975193-23975244)
chr4 (66-120)||(18448089-18448142)
chr4 (67-116)||(12838830-12838878)
chr4 (68-108)||(23083020-23083060)
chr4 (61-116)||(4214570-4214625)
chr4 (59-110)||(44810911-44810962)
chr4 (166-228)||(10107731-10107793)
chr4 (60-114)||(10782918-10782972)
chr4 (61-118)||(29245068-29245125)
chr4 (71-111)||(9053348-9053388)
chr4 (166-210)||(11520055-11520099)
chr4 (82-110)||(13209173-13209201)
chr4 (60-120)||(13588221-13588281)
chr4 (167-223)||(18447985-18448041)
[»] scaffold0340 (1 HSPs)
scaffold0340 (57-307)||(16326-16574)
[»] chr3 (12 HSPs)
chr3 (60-209)||(21018928-21019077)
chr3 (57-120)||(51119154-51119217)
chr3 (60-116)||(20886193-20886249)
chr3 (57-116)||(20338947-20339006)
chr3 (61-105)||(23055270-23055314)
chr3 (165-295)||(25780839-25780968)
chr3 (66-110)||(27820152-27820196)
chr3 (59-110)||(10950577-10950628)
chr3 (60-116)||(820529-820584)
chr3 (60-120)||(18473661-18473721)
chr3 (57-133)||(32466070-32466146)
chr3 (117-209)||(52517492-52517584)
[»] chr5 (19 HSPs)
chr5 (66-284)||(18044027-18044242)
chr5 (58-193)||(23013653-23013788)
chr5 (58-223)||(23032067-23032231)
chr5 (60-120)||(13692972-13693031)
chr5 (60-119)||(25921213-25921272)
chr5 (66-120)||(20533159-20533213)
chr5 (57-111)||(32416498-32416552)
chr5 (60-116)||(19762275-19762331)
chr5 (60-110)||(24188279-24188329)
chr5 (70-116)||(26252854-26252900)
chr5 (60-110)||(26253884-26253934)
chr5 (60-117)||(28254214-28254272)
chr5 (57-236)||(20103463-20103641)
chr5 (57-108)||(17336940-17336991)
chr5 (60-110)||(18227035-18227083)
chr5 (66-120)||(111696-111750)
chr5 (73-126)||(26270604-26270657)
chr5 (60-111)||(24261405-24261457)
chr5 (57-120)||(28279410-28279474)
[»] chr2 (21 HSPs)
chr2 (57-120)||(12556804-12556867)
chr2 (60-120)||(8502149-8502209)
chr2 (60-118)||(26292105-26292163)
chr2 (60-118)||(26652338-26652396)
chr2 (58-120)||(34368718-34368780)
chr2 (58-110)||(25937959-25938011)
chr2 (58-120)||(30682870-30682932)
chr2 (57-120)||(31427145-31427208)
chr2 (57-120)||(31433485-31433548)
chr2 (57-119)||(8446187-8446249)
chr2 (59-189)||(27870652-27870782)
chr2 (66-118)||(17181310-17181362)
chr2 (59-108)||(13517050-13517099)
chr2 (66-119)||(18923076-18923129)
chr2 (162-250)||(32620598-32620686)
chr2 (80-120)||(41789739-41789779)
chr2 (59-110)||(7707285-7707336)
chr2 (166-209)||(45620829-45620872)
chr2 (57-133)||(41669556-41669632)
chr2 (60-96)||(20175208-20175244)
chr2 (57-124)||(27748218-27748285)
[»] chr6 (16 HSPs)
chr6 (57-206)||(26297424-26297571)
chr6 (58-117)||(26214522-26214581)
chr6 (181-250)||(24654446-24654515)
chr6 (60-120)||(10821577-10821637)
chr6 (59-120)||(9387025-9387086)
chr6 (83-126)||(14273077-14273120)
chr6 (60-111)||(14726520-14726571)
chr6 (73-120)||(32759422-32759469)
chr6 (66-197)||(34479499-34479630)
chr6 (60-120)||(14882314-14882374)
chr6 (57-104)||(15550376-15550424)
chr6 (57-123)||(22537585-22537651)
chr6 (74-111)||(3357545-3357582)
chr6 (60-120)||(10504550-10504610)
chr6 (57-111)||(20559871-20559925)
chr6 (160-228)||(28583409-28583477)
[»] chr8 (15 HSPs)
chr8 (59-120)||(28318325-28318386)
chr8 (56-120)||(17973129-17973193)
chr8 (80-211)||(24851467-24851598)
chr8 (57-120)||(26009022-26009085)
chr8 (57-109)||(25597098-25597150)
chr8 (73-120)||(18829541-18829588)
chr8 (66-111)||(15059172-15059217)
chr8 (60-120)||(24114898-24114958)
chr8 (160-256)||(27305261-27305357)
chr8 (59-108)||(33109936-33109985)
chr8 (66-110)||(12565663-12565707)
chr8 (72-121)||(26614393-26614442)
chr8 (191-256)||(28311035-28311100)
chr8 (166-214)||(24519564-24519612)
chr8 (151-211)||(33110015-33110075)
[»] chr7 (31 HSPs)
chr7 (16-120)||(23007935-23008040)
chr7 (57-228)||(8158353-8158524)
chr7 (58-120)||(10991618-10991680)
chr7 (57-126)||(1279880-1279949)
chr7 (57-110)||(9891195-9891248)
chr7 (57-109)||(2454719-2454771)
chr7 (59-119)||(24751895-24751955)
chr7 (266-317)||(16224525-16224576)
chr7 (57-126)||(16224713-16224782)
chr7 (59-108)||(1732025-1732074)
chr7 (57-117)||(26133866-26133924)
chr7 (58-118)||(2505201-2505261)
chr7 (60-116)||(9863406-9863462)
chr7 (70-118)||(9917544-9917592)
chr7 (70-118)||(9925456-9925504)
chr7 (67-107)||(10414748-10414788)
chr7 (60-116)||(18467689-18467745)
chr7 (60-120)||(21884272-21884332)
chr7 (56-122)||(1728532-1728597)
chr7 (66-120)||(8038420-8038474)
chr7 (60-109)||(10938636-10938685)
chr7 (60-105)||(18448966-18449011)
chr7 (60-116)||(5221690-5221746)
chr7 (70-110)||(13708520-13708560)
chr7 (72-116)||(22468363-22468407)
chr7 (60-111)||(5484992-5485043)
chr7 (59-110)||(23803812-23803863)
chr7 (70-111)||(141160-141201)
chr7 (60-105)||(21911607-21911652)
chr7 (60-111)||(7398662-7398714)
chr7 (60-120)||(9721954-9722014)
[»] scaffold0085 (1 HSPs)
scaffold0085 (67-111)||(23394-23438)
[»] scaffold0086 (2 HSPs)
scaffold0086 (60-111)||(8768-8819)
scaffold0086 (66-111)||(13529-13574)
[»] scaffold0136 (1 HSPs)
scaffold0136 (60-111)||(14515-14566)
[»] scaffold0394 (1 HSPs)
scaffold0394 (60-120)||(10745-10806)
[»] scaffold0019 (1 HSPs)
scaffold0019 (71-111)||(27509-27549)


Alignment Details
Target: chr1 (Bit Score: 453; Significance: 0; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 16 - 515
Target Start/End: Complemental strand, 1675738 - 1675238
Alignment:
Q  16 aatccaacaagtaaaacggagatttgtcttagaaccctacggggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatag 115  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1675738 aatccaacaagtaaaatggagattcgtcttagaaccctacggggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatag 1675639  T
Q  116 agactaaggttaatgagaaagacttttccctcgaggcttctaacgtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggat 215  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1675638 agactaaggttgatgagaaagacttttccctcgaggcttctaacgtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggat 1675539  T
Q  216 ttgtatttgtaggttgattcccatgtaggttt-gggttgaaatactgagccttttttctcaaacctgcaggagaaaaacaacaaaaagttgttttttcct 314  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1675538 ttgtatttataggttgattcccatgtaggttttgggttgaaatactgagccttttttctcaaacctgcaggagaaaaacaacaaaaagttgttttttcct 1675439  T
Q  315 agatgggatgcgccatgcgcatggattaacactcggggcgtgccagtgcattttctacacacctgggacacgcaacatcttacctgaggcgccccccaca 414  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1675438 agatgggatgcgccctgcgcatggattaacactcggggtgtgccagtgcattttctacacacctgggacacgcaacatcttacctgaggcgtcccccaca 1675339  T
Q  415 gtccatcagtgcgttttcgcccttttcttcgtcattagagcgttttttccatgaaaccgatcttggaatttgaaatcgagtttctcctctctataacgtc 514  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  1675338 gtccatcagtgtgttttcgcccttttcttcgtcattagagcgttttttccatgaaaccggtcttggaatttgaaatcgagtttctcctctctgtaacgtc 1675239  T
Q  515 t 515  Q
    |    
T  1675238 t 1675238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 27910246 - 27910308
Alignment:
Q  58 ggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  27910246 ggtttagttactcatggtaactaaagacaaattacaaaagaaataaaacataccttagagact 27910308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 25264857 - 25264920
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||||| ||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||    
T  25264857 gggtttagttactcatggtaactaaagataatttacaaaagaaataaaacataccttagagact 25264920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 20033853 - 20033791
Alignment:
Q  58 ggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||| ||||||||    
T  20033853 ggtttagttactcatggtaactaaaaacaaattacataagaaataaaacataccctagagact 20033791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 17443247 - 17443303
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    ||||| ||| |||||| || |||||||||||||||||||||||||||||||| ||||    
T  17443247 tttagttacccatggtgactaaagacaaattacaaaagaaataaaacataccctaga 17443303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 34104262 - 34104310
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaa 105  Q
    |||||||| || |||||||||| ||||||||||||||||||||||||||    
T  34104262 gggtttagttattcatggtaactaaagacaaattacaaaagaaataaaa 34104310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 211
Target Start/End: Complemental strand, 52974561 - 52974409
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccc-tcgaggcttc 155  Q
    ||||||||||| |||| ||| | |||||||||||||||||  |||  |||||||| || ||||||||||| | |||  |||||  |||| |||| |||||    
T  52974561 gggtttagctattcatcgtagctaaagacaaattacaaaaagaattgaacataccctaaagactaaggttgaggagtgagactcctcccttcga-gcttc 52974463  T
Q  156 taacgtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaa 211  Q
    || ||| || |||||| || |||| ||||||||| |  ||||||||||||||||||    
T  52974462 tagcgtgtgccttcctcttaaaccgcttcgttctga--gagaatttgtgaatgaaa 52974409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 10063726 - 10063677
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacata 109  Q
    ||||| || |||||||||| |||||||||||||||||||||||| |||||    
T  10063726 tttagttattcatggtaactaaagacaaattacaaaagaaataagacata 10063677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 200 - 313
Target Start/End: Complemental strand, 13220962 - 13220850
Alignment:
Q  200 ttgtgaatgaaaggatttgtatttgtaggttgattcccatgtaggtttgggttgaaatactgagccttttttctcaaacctgcaggagaaaaacaacaaa 299  Q
    |||||||||| |||| || ||||| ||||||||||  || || |||||||||||||| ||| ||  ||||| ||||||||   ||||||||||||| | |    
T  13220962 ttgtgaatgagaggagttttatttataggttgattttcaagtgggtttgggttgaaaaact-aggttttttcctcaaacccttaggagaaaaacaatata 13220864  T
Q  300 aagttgttttttcc 313  Q
    |||||||| |||||    
T  13220863 aagttgttatttcc 13220850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 25425696 - 25425741
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaa 104  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||||    
T  25425696 gtttagttactcattgtaaccaaagacaaattacaaaagaaataaa 25425741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 8746889 - 8746845
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||    
T  8746889 tactcatggtaatcaaagataaattacaaaagaaataaaacatac 8746845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 16114133 - 16114179
Alignment:
Q  70 catggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    ||||||||| ||| ||||||||||||||||||||| |||||| ||||    
T  16114133 catggtaactaaaaacaaattacaaaagaaataaagcataccctaga 16114179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 36758835 - 36758754
Alignment:
Q  173 ttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtaggttgattcccatgtaggtttgggttga 254  Q
    ||||||| |||| |||| |||||||||||||||||||| |   |||||||| ||| |||||| ||| || ||| ||||||||    
T  36758835 ttgaaccgcttcattctgaatgagaatttgtgaatgaaggctcttgtatttatagattgatttccaagtgggtatgggttga 36758754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 10827984 - 10828048
Alignment:
Q  75 taacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagact 139  Q
    |||| |||||||||||| |||| |||| |||||| || ||||||||||| || | ||||||||||    
T  10827984 taactaaagacaaattataaaataaatcaaacatgccctagagactaagattgaggagaaagact 10828048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 1e-39; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 86 - 380
Target Start/End: Original strand, 17380405 - 17380698
Alignment:
Q  86 aaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccctcgaggcttctaacgtttgtcttccttttgaaccacttcg 185  Q
    |||||||||||||| ||||||||||| |||||||||||||| | |||| |||||  |||| || | ||||||    |||  ||||| ||||||| |||||    
T  17380405 aaattacaaaagaattaaaacataccctagagactaaggttgaggagagagactcctcccacgtg-cttctagaacttgcattcctcttgaaccgcttcg 17380503  T
Q  186 ttctaaatgagaatttgtgaatgaaaggatttgtatttgtaggttgattcccatgtaggtttgggttgaaatactgagccttttttctcaaacctgcagg 285  Q
    |||||||||||||||||||||||| |||| |||||||| |||| | ||| ||| ||  ||||||| ||||| ||| || |||||   |||||||||||||    
T  17380504 ttctaaatgagaatttgtgaatgagaggagttgtatttataggcttattaccaagtgagtttgggctgaaaaact-agacttttccatcaaacctgcagg 17380602  T
Q  286 agaaaaacaacaaaaagttgttttttcctaga-tgggatgcgccatgcgcatggattaacactcggggcgtgccagtgcattttctacacacctgg 380  Q
    |||||||||||||||||||||||| |  | || ||  |||||||   ||| |||||||||||  |||  ||||||||||||||||| |||||||||    
T  17380603 agaaaaacaacaaaaagttgttttcttttcgattgacatgcgcctcccgcgtggattaacacctgggatgtgccagtgcattttctgcacacctgg 17380698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 9264074 - 9264016
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagaga 118  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9264074 tttagttactcatggtaactaaagacaaattacaaaagaaataaaacataccatagaga 9264016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 10087833 - 10087893
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10087833 tttagttacttatggtaactaaagacaaattacaaaagaaataaaacataccatagagact 10087893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 1832640 - 1832589
Alignment:
Q  69 tcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  1832640 tcatggtaactaaagacaaattacaaaagaaataaaacataccctagagact 1832589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 5529336 - 5529394
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagaga 118  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  5529336 tttagttactcatggtaactaaagacaaattaaaaaagaaataaaacataccctagaga 5529394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 12587917 - 12587998
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagact 139  Q
    ||||||| ||| |||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||| | |||| |||||    
T  12587917 gggtttaactattcatggtaactaaagacaaattac-aaagaaataaaacatatcatggagactaaggttgaggagagagact 12587998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 19547787 - 19547737
Alignment:
Q  61 ttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  19547787 ttagttactcatggtaactaaagacaaattacaaaagaaataaaacatacc 19547737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 20316896 - 20316834
Alignment:
Q  58 ggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||    
T  20316896 ggtttagttactcatggtaactaaagaaaaattacaaaagaaataaaagataccctagagact 20316834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 11520200 - 11520151
Alignment:
Q  69 tcatggtaacaaaagacaaattacaaaagaaataaaacataccatagaga 118  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  11520200 tcatggtaactaaagacaaattacaaaagaaataaaacataccttagaga 11520151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 8139840 - 8139900
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| |||||||| |||  |||||||||||||||||||||||||||||||| ||||||||    
T  8139840 tttagttactcatgataattaaagacaaattacaaaagaaataaaacataccctagagact 8139900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 15049258 - 15049198
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||||    
T  15049258 tttagttactcatggtaactaaagataaattacaaaagaaataaagcataccttagagact 15049198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 15105166 - 15105226
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||||    
T  15105166 tttagttactcatggtaactaaagataaattacaaaagaaataaagcataccttagagact 15105226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 311
Target Start/End: Complemental strand, 20314844 - 20314609
Alignment:
Q  69 tcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccctcgaggcttctaacgtttgtctt 168  Q
    ||||| |||| ||||||||||||||||||||||||||| |||| || | ||||||||||| |||  ||||  | || | || ||| |||||| ||   ||    
T  20314844 tcatgttaactaaagacaaattacaaaagaaataaaacctaccctaaatactaaggttaaggag--agac--tcccattgatgctcctaacgctttcttt 20314749  T
Q  169 ccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtaggttgattcccatgtaggtttgggttgaaatactgagccttt 268  Q
     || ||||||||||| ||||| ||| |  | |||||||||| ||||||||||||| |||||||| | ||  || |||||||| ||||| |||||| ||||    
T  20314748 actcttgaaccactttgttctgaataaataattgtgaatgagaggatttgtatttataggttgaattcctagtgggtttgggctgaaa-actgag-cttt 20314651  T
Q  269 tttctcaaacctgcaggagaaaaacaacaaaaagttgtttttt 311  Q
    || | ||||| || ||  | |||||||||||||||| ||||||    
T  20314650 ttccccaaacatgtagctg-aaaacaacaaaaagttatttttt 20314609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 28572466 - 28572510
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  28572466 tactcatggtaactaaagacaaattacaaaagaaataaaacatac 28572510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 234
Target Start/End: Complemental strand, 19084612 - 19084445
Alignment:
Q  65 ctactcatggtaacaaaagacaaa-ttacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccctcgaggcttctaacgttt 163  Q
    ||||||||| |||| ||||||||| ||||||||||| ||||||||||| ||||| |||||||||| |||  |||||  ||||| || |||  || || ||    
T  19084612 ctactcatgctaactaaagacaaaattacaaaagaa-taaaacataccctagaggctaaggttaaggag--agactcctcccttgatgctcttagcgctt 19084516  T
Q  164 gtcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtaggttgatt 234  Q
    | | |||||||||||| | ||||||| |||||| | |||||||||| || | | |||||| |||| |||||    
T  19084515 gccctccttttgaaccgcctcgttctgaatgagcaattgtgaatgagagaaatcgtatttataggctgatt 19084445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 7613096 - 7613158
Alignment:
Q  58 ggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||||| ||||||||||||| ||| | |||||||||| ||||||||||||||| ||||||||    
T  7613096 ggtttagttactcatggtaactaaatataaattacaaatgaaataaaacataccctagagact 7613158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 12216204 - 12216154
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  12216204 tttagttactcatggtaactaaagacgaattacaaaagaaataaaacatac 12216154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 18746404 - 18746354
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacata 109  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  18746404 gtttagttactcatggtaactaaagacaaattacagaagaaataaaacata 18746354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 17661334 - 17661396
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||||| |||||||| |||| |||||||||| ||||||||||||||||||||  ||||||||    
T  17661334 gggtttagttactcatg-taactaaagacaaatgacaaaagaaataaaacatacactagagact 17661396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 23975193 - 23975244
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    ||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  23975193 tttagttacacatggcaactaaagacaaattacaaaagaaataaaacatacc 23975244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 18448142 - 18448089
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||| ||||||||    
T  18448142 tactcatggtaactaaagacaaataacaaaagaaataaaa-ataccctagagact 18448089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 12838878 - 12838830
Alignment:
Q  67 actcatggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  12838878 actcatggtaactaaagacaaattac-aaagaaataaaacataccctaga 12838830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 23083020 - 23083060
Alignment:
Q  68 ctcatggtaacaaaagacaaattacaaaagaaataaaacat 108  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  23083020 ctcatggtaactaaaaacaaattacaaaagaaataaaacat 23083060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 4214625 - 4214570
Alignment:
Q  61 ttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    |||| ||||||||| ||| ||| | |||||||||||||||||||||||||| ||||    
T  4214625 ttagttactcatgggaactaaatataaattacaaaagaaataaaacataccctaga 4214570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 44810911 - 44810962
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    |||||| |||||||||||||| |||||| |||||||||||| ||||| ||||    
T  44810911 gtttagttactcatggtaacataagacatattacaaaagaagtaaaatatac 44810962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 10107731 - 10107793
Alignment:
Q  166 cttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtagg 228  Q
    |||||| ||||||||||||||| | |||||||| |||||||||| |||  |||||||| ||||    
T  10107731 cttcctattgaaccacttcgttatgaatgagaaattgtgaatgagaggtgttgtatttatagg 10107793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 10782918 - 10782972
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccata 114  Q
    ||||| || |||| ||||| ||||| ||||||||||| |||||||||||||||||    
T  10782918 tttagttaatcatagtaactaaagaaaaattacaaaataaataaaacataccata 10782972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 29245125 - 29245068
Alignment:
Q  61 ttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagaga 118  Q
    |||| ||||||||||||| ||| | ||||||||||||||| | ||||||| |||||||    
T  29245125 ttagttactcatggtaactaaatataaattacaaaagaaacataacatactatagaga 29245068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 9053348 - 9053388
Alignment:
Q  71 atggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    |||||||| ||||| ||||||||||||| ||||||||||||    
T  9053348 atggtaactaaagataaattacaaaagacataaaacatacc 9053388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 11520099 - 11520055
Alignment:
Q  166 cttccttttgaaccacttcgttctaaatgagaatttgtgaatgaa 210  Q
    |||||| ||||||||||||||| | |||||||| |||||||||||    
T  11520099 cttcctcttgaaccacttcgttatgaatgagaaattgtgaatgaa 11520055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 13209201 - 13209173
Alignment:
Q  82 agacaaattacaaaagaaataaaacatac 110  Q
    |||||||||||||||||||||||||||||    
T  13209201 agacaaattacaaaagaaataaaacatac 13209173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 13588221 - 13588281
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| ||||||||||||| ||||| ||| ||||||  |||||||| ||||| ||||||||    
T  13588221 tttagttactcatggtaactaaagataaagtacaaagtaaataaaatataccctagagact 13588281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 18448041 - 18447985
Alignment:
Q  167 ttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtattt 223  Q
    ||||| |||||||||||| |||| |||||||| || ||||||||||| || ||||||    
T  18448041 ttcctcttgaaccacttcattctgaatgagaaattatgaatgaaaggtttggtattt 18447985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 57 - 307
Target Start/End: Original strand, 16326 - 16574
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccctcgaggcttct 156  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||| || || |||| |||||| || | |||| ||||   ||| | || ||| ||    
T  16326 gggtttagttactcatgctaactaaagacaaattacaaaagaaataaaaaattccctagaaactaagtttgaggagagagacaactcctttgaagctcct 16425  T
Q  157 aacgtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtaggttgattcccatgtaggtttgggttgaaa 256  Q
    | |  ||||||||||| |||| |||||| |  | ||||||||||| ||| ||| |||| |||||||| |||| ||||| ||| || |||||||| ||||     
T  16426 agcacttgtcttccttctgaaacacttcatattgaatgagaatttatgactgagaggagttgtatttataggctgatttccaagtgggtttgggctgaa- 16524  T
Q  257 tactgagccttttttctcaaacctgcaggagaaaaacaacaaaaagttgtt 307  Q
     | | || |||||| |||||||| |||||||||| |||  ||||| |||||    
T  16525 -aattaggctttttcctcaaacccgcaggagaaagacagtaaaaaattgtt 16574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 9e-22; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 60 - 209
Target Start/End: Complemental strand, 21019077 - 21018928
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccctcgaggcttctaac 159  Q
    ||||| ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||| ||  | |  ||| ||| | |||||| || ||| ||||     
T  21019077 tttagttactcatggtaaccaaagacaaattacaaaagatataaaacataccctagagacttagagtgagtagagagattcttcccttgaagctcctaat 21018978  T
Q  160 gtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatga 209  Q
    | ||| |||||| ||||||| | |||||||||||| |||||| |||||||    
T  21018977 gcttgccttcctcttgaaccgcatcgttctaaatgggaatttatgaatga 21018928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 51119217 - 51119154
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  51119217 gggtttagttactcatggtaactaaagacaaattacaaaagaaataaaacataccctagagact 51119154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 20886193 - 20886249
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  20886193 tttagttactcatggtaactaaagacaaattacaaaagaaataaaacataccctaga 20886249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 20339006 - 20338947
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    |||||||| ||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  20339006 gggtttagttactcatggtaaccaaaggcaaattacaaaataaataaaacataccataga 20338947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 23055314 - 23055270
Alignment:
Q  61 ttagctactcatggtaacaaaagacaaattacaaaagaaataaaa 105  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||    
T  23055314 ttagttactcatggtaactaaagacaaattacaaaagaaataaaa 23055270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 295
Target Start/End: Complemental strand, 25780968 - 25780839
Alignment:
Q  165 tcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtaggttgattcccatgtaggtttgggttgaaatactgagc 264  Q
    ||||||| ||||||| ||||| ||| |||||    || |||||||||||| |||||||| || ||||||| | | ||  ||||||||||||| ||||||     
T  25780968 tcttcctcttgaaccgcttcgctctcaatgaatgattatgaatgaaaggagttgtatttataagttgatttcaaagtgagtttgggttgaaaaactgag- 25780870  T
Q  265 cttttttctcaaacctgcaggagaaaaacaa 295  Q
    || ||| |||||||| ||| |||||||||||    
T  25780869 ctctttcctcaaacccgcaagagaaaaacaa 25780839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 27820196 - 27820152
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||||    
T  27820196 tactcgtggtaactaaagacaaattgcaaaagaaataaaacatac 27820152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 10950577 - 10950628
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    |||||| |||| ||| |||| |||||||||||| ||||||||||||||||||    
T  10950577 gtttagttacttatgttaactaaagacaaattataaaagaaataaaacatac 10950628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 820584 - 820529
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    ||||| ||| ||||||||| ||| ||||||||||||||||| |||||||||| ||||    
T  820584 tttagttacccatggtaaccaaacacaaattacaaaagaaa-aaaacataccctaga 820529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 18473721 - 18473661
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| ||||||||||||| |  || |||||| |||| |||||||||||||| ||||||||    
T  18473721 tttagttactcatggtaactattgagaaattataaaataaataaaacataccctagagact 18473661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 32466146 - 32466070
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgaga 133  Q
    |||||||| || |||||| ||| ||||| |||  ||||||||||||||||||||  |||| || |||||||| ||||    
T  32466146 gggtttagttattcatggcaactaaagaaaaaccacaaaagaaataaaacatactctagaaacaaaggttaaggaga 32466070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 52517584 - 52517492
Alignment:
Q  117 gactaaggttaatgagaaagacttttccctcgaggcttctaacgtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatga 209  Q
    |||||||||| | || | |||||| ||||| || ||||||| |  ||| |||||| ||||||| |||| |||| ||||||||||||| |||||    
T  52517584 gactaaggttgaagaaagagacttctcccttgaagcttctagccattgccttcctcttgaaccgcttcattcttaatgagaatttgttaatga 52517492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 284
Target Start/End: Original strand, 18044027 - 18044242
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccctcgaggcttctaacgtttgt 165  Q
    ||||||||| ||| ||| |||||||| ||||||||||||||||||  ||||||| |||||||  | || |||||  ||||| || |||  ||||| |||     
T  18044027 tactcatggcaaccaaatacaaattaaaaaagaaataaaacatactctagagacaaaggtta--gggatagactcctcccttgatgctcataacgcttgc 18044124  T
Q  166 cttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtaggttgattcccatgtaggtttgggttgaaatactgagcc 265  Q
    |||||| ||||| | ||||||||| ||| | || |||||||||  ||||||||||||| |||| | ||| ||| || |||||||| ||||| |||| | |    
T  18044125 cttcctcttgaatcgcttcgttctgaataacaacttgtgaatgggaggatttgtatttataggctaatttccaagtgggtttgggctgaaaaactg-gtc 18044223  T
Q  266 ttttttctcaaacctgcag 284  Q
    ||||||||| ||| |||||    
T  18044224 ttttttctccaacatgcag 18044242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 23013788 - 23013653
Alignment:
Q  58 ggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccctcgaggcttcta 157  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | || | | |||| |||||| | | | || ||| |||    
T  23013788 ggtttagttactcatggtaactaaagacaaattacaaaagaaataaaacataccctagagaccatggatgaggagagagacttcttctttgaagctccta 23013689  T
Q  158 acgtttgtcttccttttgaaccacttcgttctaaat 193  Q
        |||||||||| ||||||| |||||||||||||    
T  23013688 gtacttgtcttcctcttgaacctcttcgttctaaat 23013653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 58 - 223
Target Start/End: Original strand, 23032067 - 23032231
Alignment:
Q  58 ggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccctcgaggcttcta 157  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||||||| |||||| | ||||||||| | | |||| | |||  | ||||||  || |||    
T  23032067 ggtttagttactcatcgtaactaaagacaaattacaaaagaaataaaatatacca-atagactaaggatgaggagagatactccttcctcgaaactccta 23032165  T
Q  158 acgtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtattt 223  Q
      |||||||||| | |||||||  || ||| | ||||||||||||||||||| |||| || |||||    
T  23032166 gtgtttgtcttcttcttgaaccgttttgttttgaatgagaatttgtgaatgagaggagttatattt 23032231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 13692972 - 13693031
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  13692972 tttagttactcatggtaactaaagacaaattacaaaagaaataaaacatacc-tagagact 13693031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 25921272 - 25921213
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagac 119  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  25921272 tttagttactcatggtaactaaagacaaattacaaaagtaataagacataccatagagac 25921213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 20533213 - 20533159
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  20533213 tactcatggtaacaaaagacaaattacaaaagaaataaaatatatcctagagact 20533159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 32416552 - 32416498
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    |||||||||||||||| ||||| ||||||||||||||||||| | ||||||||||    
T  32416552 gggtttagctactcatagtaactaaagacaaattacaaaagagaaaaaacatacc 32416498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 19762331 - 19762275
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    ||||| ||| ||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  19762331 tttagttacccatggtaactaaaaacaaattacaaaagaaataaaacataccctaga 19762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 24188279 - 24188329
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    ||||| ||| ||||||||| ||| |||||||||||||||||||||||||||    
T  24188279 tttagttacccatggtaactaaaaacaaattacaaaagaaataaaacatac 24188329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 26252854 - 26252900
Alignment:
Q  70 catggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||    
T  26252854 catggtaattaaagacaaattacaaaagaaataaaacataccctaga 26252900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 26253934 - 26253884
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||| ||||    
T  26253934 tttagttactcatggtaacaatagacaaaatacaaaagaaataaaatatac 26253884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 28254214 - 28254272
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaat-aaaacataccatagag 117  Q
    ||||| ||||||||||||| ||||| |||||||||||||||| |||||||| |||||||    
T  28254214 tttagttactcatggtaactaaagataaattacaaaagaaataaaaacatatcatagag 28254272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 236
Target Start/End: Complemental strand, 20103641 - 20103463
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatga-gaaagacttttccctcgaggcttc 155  Q
    |||||||| ||||||||||||| ||| | |||||||||||  ||||||||||||  ||||||| ||  ||  ||| || |||||  ||||| || ||| |    
T  20103641 gggtttagttactcatggtaactaaaaaaaaattacaaaatcaataaaacatactctagagacaaaactt--tgaggagagactcctcccttgatgctcc 20103544  T
Q  156 taacgtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtaggttgattcc 236  Q
    ||  || || |||||| ||||||| ||| ||| | ||||||| ||||||||||| || | |||||||| ||||||| ||||    
T  20103543 tagtgtctgccttcctcttgaaccgctttgttttgaatgagattttgtgaatgagagaagttgtatttataggttgtttcc 20103463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 17336991 - 17336940
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacat 108  Q
    |||||||| || ||| |||||| ||| |||||||||||||||||||||||||    
T  17336991 gggtttagttattcaaggtaactaaaaacaaattacaaaagaaataaaacat 17336940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 18227035 - 18227083
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    ||||||||||||||||||| ||||| ||||||||||  |||||||||||||    
T  18227035 tttagctactcatggtaactaaagataaattacaaa--aaataaaacatac 18227083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 111750 - 111696
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||| |||||||  ||| |||||||||||||||||||||||||||  ||||||||    
T  111750 tacttatggtaattaaacacaaattacaaaagaaataaaacatacactagagact 111696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 26270604 - 26270657
Alignment:
Q  73 ggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggtt 126  Q
    |||||| ||||||||||||||||| ||||||||||| |  ||||||| ||||||    
T  26270604 ggtaaccaaagacaaattacaaaataaataaaacattctctagagaccaaggtt 26270657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 24261405 - 24261457
Alignment:
Q  60 tttagctactcatggtaac-aaaagacaaattacaaaagaaataaaacatacc 111  Q
    ||||| ||||||||||||| |||| | ||||||||||||||||||||| ||||    
T  24261405 tttagttactcatggtaactaaaaaataaattacaaaagaaataaaacttacc 24261457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 28279410 - 28279474
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaatt-acaaaagaaataaaacataccatagagact 120  Q
    |||||||| |||| |||||||| ||||||||||| | |||| | |||||||||||| ||||||||    
T  28279410 gggtttagatactaatggtaactaaagacaaattcaaaaaatatataaaacataccctagagact 28279474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 12556867 - 12556804
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  12556867 gggtttagttactcatggtaactaaagacaaattacaaaagaaataaaacataccctagagact 12556804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 8502209 - 8502149
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  8502209 tttagctacccatggtaactaaagacaaattacaaaagaaataaaacataccctagagact 8502149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 26292105 - 26292163
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagaga 118  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  26292105 tttagttactcatggtaactaaagacaaattacaaaagaaataaaacataccctagaga 26292163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 26652396 - 26652338
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagaga 118  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  26652396 tttagttactcatggtaactaaagacaaattacaaaagaaataaaacataccctagaga 26652338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 34368718 - 34368780
Alignment:
Q  58 ggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  34368718 ggtttagttactcatggtaactaaaaacaaattacaaaagaaataaaacataccctagagact 34368780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 25937959 - 25938011
Alignment:
Q  58 ggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  25937959 ggtttagttactcatggtaactaaagacaaattacaaaagaaataaaacatac 25938011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 30682932 - 30682870
Alignment:
Q  58 ggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||||| ||||||||||||| ||||||||||||||| |||||||||||| ||| ||||||||    
T  30682932 ggtttagttactcatggtaactaaagacaaattacaatagaaataaaacacaccctagagact 30682870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 31427145 - 31427208
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||||| ||||||| ||||| ||||||||||||||||| |||||||||||||  ||||||||    
T  31427145 gggtttagttactcatagtaactaaagacaaattacaaaataaataaaacatactctagagact 31427208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 31433485 - 31433548
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||||| ||  ||||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  31433485 gggtttagttatccatggtaactaaagacaaattacaaaagaaataaaacatactctagagact 31433548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 8446249 - 8446187
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagac 119  Q
    |||||||| | ||||||||||| ||| |||||||||||||||||| ||||||||| |||||||    
T  8446249 gggtttagttgctcatggtaactaaacacaaattacaaaagaaattaaacataccctagagac 8446187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 189
Target Start/End: Original strand, 27870652 - 27870782
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccctcgaggcttctaa 158  Q
    |||||| |||| |||||||| |||||||||||||| ||||||||||| ||||| |||||||| ||  | | ||||||||||  || || || |||  ||     
T  27870652 gtttagttactaatggtaaccaaagacaaattacataagaaataaaatataccctagagacttagagtgaggagaaagactcctcacttgaagctcttag 27870751  T
Q  159 cgtttgtcttccttttgaaccacttcgttct 189  Q
     ||||| |||||| || ||||||||||||||    
T  27870752 tgtttgccttcctcttaaaccacttcgttct 27870782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 17181310 - 17181362
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagaga 118  Q
    ||||||||||||| |||||||||||| |||||||||| |||||||| ||||||    
T  17181310 tactcatggtaactaaagacaaattataaaagaaatataacataccctagaga 17181362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 13517099 - 13517050
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacat 108  Q
    |||||| ||||||||||||| ||||| |||||| ||||||||||||||||    
T  13517099 gtttagttactcatggtaactaaagataaattaaaaaagaaataaaacat 13517050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 18923076 - 18923129
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagac 119  Q
    ||||||||  ||| |||||||||||| |||||||||||||||| ||||||||||    
T  18923076 tactcatgaaaactaaagacaaattataaaagaaataaaacatgccatagagac 18923129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 32620598 - 32620686
Alignment:
Q  162 ttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtaggttgattcccatgtaggtttggg 250  Q
    |||||||||| ||||||  |||| |||| |||||| |||||||||| | | || |||||||| |||| |||||  ||||||||||||||    
T  32620598 ttgtcttcctcttgaactgcttcattctgaatgagtatttgtgaataagaagagttgtatttataggatgatttgcatgtaggtttggg 32620686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 41789779 - 41789739
Alignment:
Q  80 aaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  41789779 aaagacaaattacaaaagaaataaaacatactctagagact 41789739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 7707285 - 7707336
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    |||||| ||||||||||||||||||| | | |||||||||||||||| ||||    
T  7707285 gtttagttactcatggtaacaaaagatataatacaaaagaaataaaatatac 7707336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 45620872 - 45620829
Alignment:
Q  166 cttccttttgaaccacttcgttctaaatgagaatttgtgaatga 209  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||    
T  45620872 cttcctcttgaaccacttcgttctgaatgagaaattgtgaatga 45620829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 41669632 - 41669556
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaa-ttacaaaagaaataaaacataccatagagactaaggttaatgaga 133  Q
    |||||||| ||||||||||||| ||| | ||| ||| ||||||| |||| ||||||||| ||||||||||||| ||||    
T  41669632 gggtttagttactcatggtaactaaaaataaaattataaaagaa-taaatcataccatatagactaaggttaaggaga 41669556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 20175208 - 20175244
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaa 96  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  20175208 tttagctacacatggtaactaaagacaaattacaaaa 20175244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 27748285 - 27748218
Alignment:
Q  57 gggtttagctactcatggtaacaaaagac-aaattacaaaagaaataaaacataccatagagactaagg 124  Q
    |||||||| ||||||||||||| |||||| |||||| ||||| | ||||||||| |||||| |||||||    
T  27748285 gggtttagttactcatggtaactaaagacaaaattataaaag-agtaaaacatatcatagacactaagg 27748218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 26297424 - 26297571
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccctcgaggcttct 156  Q
    ||||| || ||||||||||||| ||||| |||||||||||||||||||||||||  ||||||| |||||| |||||  |||||  | ||| || ||| ||    
T  26297424 gggttgagttactcatggtaaccaaagataaattacaaaagaaataaaacatactctagagacaaaggttgatgag--agactccttccttgatgctcct 26297521  T
Q  157 aacgtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaa 206  Q
    | || ||| |||  |||||||||| |||||| | ||||||||||||||||    
T  26297522 agcgcttgcctttattttgaaccatttcgttatgaatgagaatttgtgaa 26297571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 26214581 - 26214522
Alignment:
Q  58 ggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagag 117  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  26214581 ggtttagttactcatggtaacaaaagacaaattacaaaagaaataaaatataccctagag 26214522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 24654515 - 24654446
Alignment:
Q  181 cttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtaggttgattcccatgtaggtttggg 250  Q
    ||||||||||||||||||||||||||||| |||| |||||||| |||||||||| ||| || ||||||||    
T  24654515 cttcgttctaaatgagaatttgtgaatgagaggagttgtatttataggttgattgccaagtgggtttggg 24654446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 10821577 - 10821637
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  10821577 tttagttactcttggtaactaaagacaaattacaaaagaaataaaacataccctagagact 10821637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 9387025 - 9387086
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||| ||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||    
T  9387025 gtttagttactcattgtaactaaagacatattacaaaagaaataaaacataccctagagact 9387086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 14273077 - 14273120
Alignment:
Q  83 gacaaattacaaaagaaataaaacataccatagagactaaggtt 126  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  14273077 gacaaattacaaaataaataaaacataccatagagactaaggtt 14273120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 14726520 - 14726571
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  14726520 tttagttactcatggtaactaaaaacaaattacaaaagaaataaaacatacc 14726571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 32759422 - 32759469
Alignment:
Q  73 ggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  32759422 ggtaactaaagacaaattacaaaagaaataaaacataccttagagact 32759469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 34479499 - 34479630
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccctcgaggcttctaacgtttgt 165  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||  |||| ||| ||  | | |||| |||||  ||||| || ||| |||  | ||||    
T  34479499 tactcatggtaactaaagacaaattacaaaagaaataaagcatacgctagaaacttagagtgaggagagagactcctcccttgaagctcctagtgcttgt 34479598  T
Q  166 cttccttttgaaccacttcgttctaaatgaga 197  Q
    | |||| |||||||||||| || |||||||||    
T  34479599 catcctcttgaaccacttcattttaaatgaga 34479630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 14882314 - 14882374
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| |||| |||||||| |||||||||||  ||||||||||||||||||| ||||||||    
T  14882314 tttagttactgatggtaactaaagacaaattctaaaagaaataaaacataccctagagact 14882374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 15550376 - 15550424
Alignment:
Q  57 gggtttagctactcatggtaacaaaagac-aaattacaaaagaaataaa 104  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  15550376 gggtttagctacttatggtaacaaaagacaaaattacaaaagaaataaa 15550424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 22537651 - 22537585
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaag 123  Q
    |||||||| |||||||| |||  ||| |||||||||||||||||||| ||||||| || ||||||||    
T  22537651 gggtttagttactcatgttaatgaaaaacaaattacaaaagaaataatacataccctatagactaag 22537585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 3357545 - 3357582
Alignment:
Q  74 gtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  3357545 gtaactaaagacaaattacaaaagaaataaaacatacc 3357582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 10504550 - 10504610
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| ||| ||||| ||| ||||| |||||||||||||||||||||||||  ||||||||    
T  10504550 tttagttacacatggcaactaaagataaattacaaaagaaataaaacatactctagagact 10504610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 20559925 - 20559871
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    |||||| |||||||||   ||| ||||||||||||| ||||||||||||||||||    
T  20559925 gggtttggctactcatcaaaactaaagacaaattactaaagaaataaaacatacc 20559871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 28583477 - 28583409
Alignment:
Q  160 gtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtagg 228  Q
    ||||| |||||| ||||||||||||||||| |||||||| || ||||| |||  ||| |||||| ||||    
T  28583477 gtttgccttcctattgaaccacttcgttctgaatgagaaattatgaattaaaatattggtatttatagg 28583409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 28318325 - 28318386
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  28318325 gtttagttactcatggtaactaaagacaaattacaaaagaagtaaaacataccatagagact 28318386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 17973129 - 17973193
Alignment:
Q  56 ggggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| || |||||    
T  17973129 ggggtttagcttctcatggtaactaaagaaaaattacaaaagaaataaaacataccctaaagact 17973193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 80 - 211
Target Start/End: Complemental strand, 24851598 - 24851467
Alignment:
Q  80 aaagacaaattacaaaagaaataaaacataccatagagactaaggttaatgagaaagacttttccctcgaggcttctaacgtttgtcttccttttgaacc 179  Q
    ||||| |||||||||||||||||||||||||| | |||||| ||| ||| |||| | |||    ||| || |||||||  ||||| |||||| |||||||    
T  24851598 aaagaaaaattacaaaagaaataaaacataccctggagactcagggtaaggagagaaactccctccttgaagcttctagtgtttgccttcctcttgaacc 24851499  T
Q  180 acttcgttctaaatgagaatttgtgaatgaaa 211  Q
     ||||||||||||| |||| || |||||||||    
T  24851498 gcttcgttctaaattagaaattatgaatgaaa 24851467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 26009022 - 26009085
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||||| ||||||||  ||| |||||||||||||||||||||||||||||||| ||||||||    
T  26009022 gggtttagttactcatgtcaactaaagacaaattacaaaagaaataaaacataccctagagact 26009085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 25597150 - 25597098
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacata 109  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  25597150 gggtttagttactcatggtaactaaagaaaaattacaaaagaaataaaacata 25597098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 18829541 - 18829588
Alignment:
Q  73 ggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  18829541 ggtaacaaaagataaattacaaaagaaataaaacataccgtagagact 18829588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 15059217 - 15059172
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  15059217 tactcatggtaactaaagacaaattacaagagaaataaaacatacc 15059172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 24114958 - 24114898
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| |||||||| |||| ||||||||||||||||||| |||||||||||| || |||||    
T  24114958 tttagttactcatgataactaaagacaaattacaaaagacataaaacataccctatagact 24114898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 27305261 - 27305357
Alignment:
Q  160 gtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtaggttgattcccatgtaggtttgggttgaaa 256  Q
    ||||| |||||| |||||| | || ||||| ||||||||||||||||||| || | |||||||| |||| ||||| ||| ||  |||||||||||||    
T  27305261 gtttgccttcctcttgaactaatttgttctgaatgagaatttgtgaatgagagaagttgtatttataggctgatttccaagtgagtttgggttgaaa 27305357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 33109936 - 33109985
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacat 108  Q
    |||||||||||||||  ||| |||||| ||||||||||||||||||||||    
T  33109936 gtttagctactcatgacaactaaagaccaattacaaaagaaataaaacat 33109985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 12565663 - 12565707
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||    
T  12565663 tactcatgataactaaaaacaaattacaaaagaaataaaacatac 12565707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 26614442 - 26614393
Alignment:
Q  72 tggtaacaaaagacaaattacaaaagaaataaaacataccatagagacta 121  Q
    ||||||| |||| ||||||| ||| ||||||||||||||| |||||||||    
T  26614442 tggtaactaaagtcaaattaaaaatgaaataaaacataccctagagacta 26614393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 28311035 - 28311100
Alignment:
Q  191 aatgagaatttgtgaatgaaaggatttgtatttgtaggttgattcccatgtaggtttgggttgaaa 256  Q
    ||||||||||| |||||||||||| |||||||  |||| ||||| |||| | | ||||||||||||    
T  28311035 aatgagaatttatgaatgaaaggaattgtattcctaggctgatttccatttggatttgggttgaaa 28311100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 24519612 - 24519564
Alignment:
Q  166 cttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaagga 214  Q
    |||||| ||||||||||||||||| |||||||| || ||||||| ||||    
T  24519612 cttcctcttgaaccacttcgttctgaatgagaaattatgaatgagagga 24519564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 33110015 - 33110075
Alignment:
Q  151 gcttctaacgtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaa 211  Q
    ||||||||  |||| |||||| ||||||||||||| |||||||  |||||||| |||||||    
T  33110015 gcttctaagatttgccttcctcttgaaccacttcgctctaaataggaatttgtcaatgaaa 33110075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 23007935 - 23008040
Alignment:
Q  16 aatccaacaagtaaaacggagatttgtcttagaaccctacggggttt-agctactcatggtaacaaaagacaaattacaaaagaaataaaacataccata 114  Q
    |||||||||| |||||  ||| ||  |||||||||||||   ||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  23007935 aatccaacaaataaaatagaggttcatcttagaaccctaataggttttagttactcatggtaactaaagacaaattacaaaagaaataaaacatacccta 23008034  T
Q  115 gagact 120  Q
    ||||||    
T  23008035 gagact 23008040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 228
Target Start/End: Original strand, 8158353 - 8158524
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagaga-ctaaggttaatgagaaagacttttccctcgaggcttc 155  Q
    |||||||| ||||||||||||| |||||| | ||||||||||| ||||||||||| ||||||  ||| ||  | ||||||||||| ||||| || ||| |    
T  8158353 gggtttagttactcatggtaaccaaagacgatttacaaaagaattaaaacataccctagagatttaaagtgta-gagaaagacttctcccttgaagctcc 8158451  T
Q  156 taacgtttgtcttccttttgaaccacttcgttctaaatgagaatttgtgaatgaaaggatttgtatttgtagg 228  Q
    ||  ||||| |||||| |||||||||||| || | ||||| || || ||||||| ||||  ||||||| ||||    
T  8158452 tagtgtttgccttcctcttgaaccacttcattatgaatgaaaaattatgaatgagaggagatgtatttatagg 8158524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 10991680 - 10991618
Alignment:
Q  58 ggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||||| ||||||||||| | |||||||||||||||||||||||||||||||| ||| ||||    
T  10991680 ggtttagttactcatggtacctaaagacaaattacaaaagaaataaaacataccctagcgact 10991618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 1279880 - 1279949
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaaggtt 126  Q
    |||||| ||||||||||||||| ||||| |||||||||||||||||||| ||||  || |||||||||||    
T  1279880 gggttttgctactcatggtaactaaagaaaaattacaaaagaaataaaagatacactatagactaaggtt 1279949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 9891195 - 9891248
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||    
T  9891195 gggtttagttactcatggtaactaaagacaaattacaaaagaaataaaatatac 9891248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 2454719 - 2454771
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacata 109  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  2454719 gggtttagctactcatggtaaataaagacatattacaaaagaaataaaacata 2454771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 24751955 - 24751895
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagac 119  Q
    |||||| ||||||||||||| ||| | |||||||||||||||||||||||||| |||||||    
T  24751955 gtttagttactcatggtaactaaaaaaaaattacaaaagaaataaaacataccctagagac 24751895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 317
Target Start/End: Complemental strand, 16224576 - 16224525
Alignment:
Q  266 ttttttctcaaacctgcaggagaaaaacaacaaaaagttgttttttcctaga 317  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||||||    
T  16224576 ttttttctcaaacctacaggagaaaaacaacaaaaagttgttagttcctaga 16224525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 16224782 - 16224713
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaa-ttacaaaagaaataaaacataccatagagactaaggtt 126  Q
    |||||||| ||||||| ||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  16224782 gggtttagttactcatagtaactaaagaaaaaattacaaaagaa-taaaacataccatagagactaaggtt 16224713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 1732025 - 1732074
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacat 108  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||||||    
T  1732025 gtttagttactcatgataactaaagacaaattacaaaagaaataaaacat 1732074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 26133924 - 26133866
Alignment:
Q  57 gggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagag 117  Q
    |||||||| ||||||||||||| |  ||||||||||||||||||||||||||||| |||||    
T  26133924 gggtttagttactcatggtaacta--gacaaattacaaaagaaataaaacataccctagag 26133866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 2505201 - 2505261
Alignment:
Q  58 ggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagaga 118  Q
    ||||||| ||||| |  |||| |||||||||||| ||||||||||||||||||||||||||    
T  2505201 ggtttagttactcgtaataactaaagacaaattaaaaaagaaataaaacataccatagaga 2505261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 9863462 - 9863406
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    ||||| || |||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  9863462 tttagttaatcatggtaactaaagacaaattacaaaagaaaaaaaacatacaataga 9863406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 9917544 - 9917592
Alignment:
Q  70 catggtaacaaaagacaaattacaaaagaaataaaacataccatagaga 118  Q
    ||||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  9917544 catggtaactaaagacaaattacaaaaaaaataaaacataccctagaga 9917592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 9925456 - 9925504
Alignment:
Q  70 catggtaacaaaagacaaattacaaaagaaataaaacataccatagaga 118  Q
    ||||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  9925456 catggtaactaaagacaaattacaaaaaaaataaaacataccctagaga 9925504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 10414788 - 10414748
Alignment:
Q  67 actcatggtaacaaaagacaaattacaaaagaaataaaaca 107  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  10414788 actcatggtaactaaagacaaattacaaaagaaataaaaca 10414748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 18467689 - 18467745
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    ||||| ||||||||||||  ||| |||||||||||||||||||||||||||| ||||    
T  18467689 tttagttactcatggtaagtaaaaacaaattacaaaagaaataaaacataccctaga 18467745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 21884332 - 21884272
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| ||||||||||||| ||||||||||||||||||||| |||| ||||| || |||||    
T  21884332 tttagttactcatggtaactaaagacaaattacaaaagaaacaaaaaataccctatagact 21884272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 1728532 - 1728597
Alignment:
Q  56 ggggtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagactaa 122  Q
    ||||||||| |||||||| |||| ||| ||||||||||||||||||||| |||||| || |||||||    
T  1728532 ggggtttagttactcatgataactaaa-acaaattacaaaagaaataaagcataccttaaagactaa 1728597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 8038420 - 8038474
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||| || |||||    
T  8038420 tactcatggtaactaaagacaaattacaaaagaaatataacacaccctaaagact 8038474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 10938636 - 10938685
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacata 109  Q
    ||||| |||| | |||||| ||||||||||||||||||||||||||||||    
T  10938636 tttagttacttagggtaactaaagacaaattacaaaagaaataaaacata 10938685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 18448966 - 18449011
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaa 105  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  18448966 tttagttacacatggtaactaaagacaaattacaaaagaaataaaa 18449011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 5221746 - 5221690
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||| ||| |||| ||||    
T  5221746 tttagttacccatggtaacaaaaaacaaattacaaaagaaatagaacgtaccctaga 5221690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 13708520 - 13708560
Alignment:
Q  70 catggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  13708520 catggtaactaaagacaaattacaaaagaaatcaaacatac 13708560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 22468363 - 22468407
Alignment:
Q  72 tggtaacaaaagacaaattacaaaagaaataaaacataccataga 116  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||    
T  22468363 tggtaactaaaaacaaattacaaaagaaataaaacataccttaga 22468407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 5484992 - 5485043
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    ||||| ||| |||| |||| ||| ||||||||||||||||||||||||||||    
T  5484992 tttagttacccatgataactaaaaacaaattacaaaagaaataaaacatacc 5485043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 23803812 - 23803863
Alignment:
Q  59 gtttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatac 110  Q
    |||||| |||||||| ||||||||||||   |||||||||||||||||||||    
T  23803812 gtttagttactcatgataacaaaagacatgatacaaaagaaataaaacatac 23803863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 141160 - 141201
Alignment:
Q  70 catggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    ||||||||||||| || |||||||||||||||||||| ||||    
T  141160 catggtaacaaaaaactaattacaaaagaaataaaacttacc 141201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 21911652 - 21911607
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaa 105  Q
    ||||| || |||||||||| ||||| ||||||||||||||||||||    
T  21911652 tttagttattcatggtaactaaagaaaaattacaaaagaaataaaa 21911607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 7398662 - 7398714
Alignment:
Q  60 tttagctactcatggtaacaaaag-acaaattacaaaagaaataaaacatacc 111  Q
    ||||| ||||||||||||| |||| || |||||||||||||||||||| ||||    
T  7398662 tttagttactcatggtaactaaagcactaattacaaaagaaataaaacttacc 7398714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 9721954 - 9722014
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacataccatagagact 120  Q
    ||||| ||||||||||||| ||||| ||| ||||||  |||||||| ||||| ||||||||    
T  9721954 tttagttactcatggtaactaaagataaagtacaaagtaaataaaatataccctagagact 9722014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 23394 - 23438
Alignment:
Q  67 actcatggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  23394 actcatggtaactaaagacaaattacaaaagaaataaaacatacc 23438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 8768 - 8819
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  8768 tttagttactcatgataactaaagacaaattacaaaagaaataaaacatacc 8819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 13574 - 13529
Alignment:
Q  66 tactcatggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    |||| |||||||| |||||||||| | |||||||||||||||||||    
T  13574 tacttatggtaactaaagacaaataataaaagaaataaaacatacc 13529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 14566 - 14515
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
    ||||| ||||||||||||| ||||||||||||| | ||||||||||||||||    
T  14566 tttagttactcatggtaactaaagacaaattacgatagaaataaaacatacc 14515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 10806 - 10745
Alignment:
Q  60 tttagctactcatggtaacaaaagacaaattacaaaagaaataaaa-cataccatagagact 120  Q
    ||||| ||||||||||||| |||||||||||  ||||||||||||| |||||| ||||||||    
T  10806 tttagttactcatggtaactaaagacaaattgaaaaagaaataaaagcataccttagagact 10745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 27509 - 27549
Alignment:
Q  71 atggtaacaaaagacaaattacaaaagaaataaaacatacc 111  Q
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T  27509 atggtaattaaagacaaattactaaagaaataaaacatacc 27549  T

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