View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10486_high_8 (Length: 320)
Name: NF10486_high_8
Description: NF10486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10486_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 19 - 307
Target Start/End: Complemental strand, 48092354 - 48092056
Alignment:
| Q |
19 |
gattgatactactaaccaattatttatataatttgaccgtgaaataaatcaaatcaaat----------aatggatcacatgcaatgaaaaagagagtaa |
108 |
Q |
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| T |
48092354 |
gattgatactactaaccaattatttatataatttgaccgtgaaataaatcaaatcaaatcaaatcaaataatggatcacatgctatgaaaaagagagtaa |
48092255 |
T |
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| Q |
109 |
tttaccctcaaaatcttcttatattcagatattatatatctgacataatccggtaaattgtattggcgtgatcttgcagagaatggcactaagtaatagt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48092254 |
tttaccctcaaaatcttcttatattcagatattatatatctgacataatccggtaaattgtattggcgtgatcttgcagagaatggcactaagtaatagt |
48092155 |
T |
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| Q |
209 |
tattcacaaaatcatttcctccaagagtgatgagtactaatgctccattcactaagctctgagtttgttcaggtccaataagaccactcactctctgct |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48092154 |
tattcacaaaatcatttcctccaagagtgatgagtactaatgctccattcactaagctctgagtttgttcaggtccaataagaccactcactctctgct |
48092056 |
T |
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