View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10488_high_17 (Length: 279)
Name: NF10488_high_17
Description: NF10488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10488_high_17 |
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Alignment Details
Target: chr4 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 13 - 266
Target Start/End: Complemental strand, 8058568 - 8058315
Alignment:
| Q |
13 |
acatacattatttagatttgttctaactcacttattttctacatatatggttgttttcctatatagtaaaaaagcttagcctaatctttgggtaattatt |
112 |
Q |
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| T |
8058568 |
acatacattatttagatttgttctaactcacttattttctacatatatggttgttttcctatatagtaaaaaagcttagcctaatctttgggtaattatt |
8058469 |
T |
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| Q |
113 |
ttgcagttcaatgaacacaaaaaatggtgataaaaagttcagtgatctatcatcacaaaagctcttggatactgggttcaaatttaagtacagcgtcaat |
212 |
Q |
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| T |
8058468 |
ttgcagttcaatgaacacaaaaaatggtgataaaaagttcagtgatctatcatcaaaaaagctcttggatactgggttcaaatttaagtacagcgtcaat |
8058369 |
T |
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| Q |
213 |
gatatgtatgatggagctatacaatgctgtaaagagaagggcattctttagttc |
266 |
Q |
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| T |
8058368 |
gatatgtatgatggagctatacaatgctgtaaagagaagggcattctttagttc |
8058315 |
T |
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