View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10489_high_17 (Length: 246)
Name: NF10489_high_17
Description: NF10489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10489_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 49 - 230
Target Start/End: Complemental strand, 45361657 - 45361476
Alignment:
| Q |
49 |
tgtatgtatgtaatgagcagaatacaaatactatttttaagcattgaactctccaaagggaagtttttatttctttggagaaagagaggtgttactgtta |
148 |
Q |
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| T |
45361657 |
tgtatgtatgtaatgagcagaatacaaatactatttttaagctttgaactctccaaagggaagtttttatttctttggagaaagagaggtgttactgtta |
45361558 |
T |
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| Q |
149 |
ttatctgataacttactttaggttgaatggaatttttcagtctgtcagtaaaaggcatagaaaaagcattttttaaacaaca |
230 |
Q |
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| T |
45361557 |
ttatctgataacttactttaggttgaatggaattttccagtctgtcaataaaaggcatagaaaaagcattttgtaaacaaca |
45361476 |
T |
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