View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10489_low_18 (Length: 271)
Name: NF10489_low_18
Description: NF10489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10489_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 263
Target Start/End: Complemental strand, 34140223 - 34139978
Alignment:
| Q |
18 |
aaaagtgttaatttccttggaagaatcttagtattaatttctgcaactccatggcctccttaatgcttagtggtgctgaaaatacaaagcttattaatag |
117 |
Q |
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| T |
34140223 |
aaaagtgttaatttccttggaagagtcttagtattaatttctgcaactccatggcctccttaatgcttagtggtgctgaaaatacaaagcttattaatag |
34140124 |
T |
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| Q |
118 |
catagttccatctggattaggttctgtgagtcttaactttcacaacaagtgtttcttcagaaataatgtagtttcatatggcaacaaatacggtgcaaga |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34140123 |
catagttccatctggattaggttctgtgagtcttaactttcacaagaagtgtttcttcagaaataatgtagtttcatatggcaacaaatacggtgcaaga |
34140024 |
T |
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| Q |
218 |
aacttgacaccgcgatgcagcatctcacccgcaaggccttcttctc |
263 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
34140023 |
aacttgacaccgcgatgcagcatctcatccgcaaggccttcttctc |
34139978 |
T |
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