View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10489_low_28 (Length: 233)
Name: NF10489_low_28
Description: NF10489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10489_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 11 - 211
Target Start/End: Original strand, 43537021 - 43537218
Alignment:
| Q |
11 |
gaggagcagagaatccagtaaaggaaaatgagagtcccaaacttgaagctctactaagagcagcaccactattaacctcatgatccaaatcaaccttcaa |
110 |
Q |
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| T |
43537021 |
gaggaacagagaatccagtaaaggaaaatgagagtcccaaacttgaagctctactaagagcagcaccactattaacctcat---ccaaatcaaccttcaa |
43537117 |
T |
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| Q |
111 |
agaagtctggacactcctcgccttccttatgtgtgtatttcttccaccgggggatgccctccttgattttcttgtaagactcccactaccaccgtccgcc |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
43537118 |
agaagtctggacactcctcgccttccttatgtgtgtatttcttccaccgggggatgccctccttgattttctagtaagactcccactaccaccgtccgcc |
43537217 |
T |
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