View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10489_low_30 (Length: 211)

Name: NF10489_low_30
Description: NF10489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10489_low_30
NF10489_low_30
[»] chr8 (28 HSPs)
chr8 (29-156)||(5033164-5033291)
chr8 (30-156)||(35440978-35441104)
chr8 (29-156)||(33841599-33841726)
chr8 (22-156)||(10086760-10086894)
chr8 (29-156)||(45191135-45191262)
chr8 (49-156)||(8243416-8243523)
chr8 (49-160)||(34229640-34229751)
chr8 (29-156)||(5667100-5667227)
chr8 (23-156)||(43844473-43844604)
chr8 (23-131)||(39850983-39851091)
chr8 (29-156)||(8796425-8796552)
chr8 (25-131)||(6296633-6296739)
chr8 (49-160)||(4958599-4958708)
chr8 (49-107)||(34541831-34541889)
chr8 (97-156)||(5033237-5033296)
chr8 (49-96)||(35031642-35031689)
chr8 (29-83)||(5033169-5033223)
chr8 (110-156)||(5667186-5667232)
chr8 (29-83)||(43844545-43844599)
chr8 (29-82)||(5667105-5667158)
chr8 (110-155)||(10086846-10086891)
chr8 (89-156)||(2581828-2581895)
chr8 (97-156)||(33841594-33841653)
chr8 (97-156)||(35440972-35441031)
chr8 (29-83)||(8243464-8243518)
chr8 (29-83)||(33841667-33841721)
chr8 (29-83)||(35441045-35441099)
chr8 (38-107)||(31159903-31159972)
[»] chr1 (45 HSPs)
chr1 (29-156)||(48993925-48994052)
chr1 (23-156)||(29179599-29179732)
chr1 (49-160)||(9157309-9157420)
chr1 (29-156)||(32540756-32540883)
chr1 (25-156)||(17127568-17127699)
chr1 (29-156)||(5995372-5995499)
chr1 (29-133)||(33219599-33219703)
chr1 (49-156)||(37155049-37155156)
chr1 (69-166)||(36290455-36290552)
chr1 (49-160)||(4608995-4609106)
chr1 (59-156)||(1091582-1091679)
chr1 (75-163)||(44706838-44706926)
chr1 (29-107)||(15220863-15220941)
chr1 (29-131)||(29371396-29371498)
chr1 (50-152)||(45728294-45728396)
chr1 (47-133)||(46333972-46334058)
chr1 (29-131)||(49444921-49445021)
chr1 (49-102)||(1819517-1819570)
chr1 (83-156)||(21630045-21630118)
chr1 (49-156)||(48498418-48498525)
chr1 (49-131)||(5694918-5694999)
chr1 (49-131)||(8337879-8337961)
chr1 (88-168)||(28395628-28395708)
chr1 (49-116)||(741530-741597)
chr1 (49-131)||(34062237-34062319)
chr1 (49-127)||(47303427-47303505)
chr1 (49-131)||(48604975-48605057)
chr1 (97-156)||(48993920-48993979)
chr1 (29-83)||(9157318-9157372)
chr1 (33-83)||(21630054-21630104)
chr1 (29-83)||(45728295-45728349)
chr1 (29-83)||(48993993-48994047)
chr1 (49-156)||(19711208-19711313)
chr1 (49-101)||(28928807-28928859)
chr1 (97-160)||(17127563-17127626)
chr1 (97-160)||(29371444-29371507)
chr1 (97-156)||(49444916-49444975)
chr1 (25-83)||(17127640-17127698)
chr1 (97-155)||(29179601-29179659)
chr1 (29-83)||(29179673-29179727)
chr1 (111-156)||(5995459-5995504)
chr1 (111-156)||(46932000-46932045)
chr1 (111-156)||(46932072-46932116)
chr1 (112-168)||(15220902-15220958)
chr1 (29-73)||(36290493-36290537)
[»] chr4 (40 HSPs)
chr4 (29-163)||(23444277-23444411)
chr4 (30-156)||(51265448-51265574)
chr4 (29-142)||(47661859-47661972)
chr4 (29-156)||(35682169-35682296)
chr4 (29-156)||(6271705-6271832)
chr4 (29-107)||(42375062-42375140)
chr4 (33-166)||(47762601-47762734)
chr4 (49-156)||(26186044-26186149)
chr4 (35-101)||(25818387-25818453)
chr4 (29-131)||(53954638-53954740)
chr4 (69-156)||(30861822-30861909)
chr4 (47-101)||(28693949-28694003)
chr4 (29-155)||(44379934-44380060)
chr4 (49-131)||(55090024-55090106)
chr4 (59-131)||(40789207-40789279)
chr4 (109-156)||(2325068-2325115)
chr4 (97-168)||(47661918-47661989)
chr4 (49-107)||(47404613-47404671)
chr4 (49-107)||(50384133-50384191)
chr4 (49-101)||(31430489-31430541)
chr4 (49-101)||(52028607-52028659)
chr4 (97-157)||(53954686-53954746)
chr4 (97-168)||(23444260-23444331)
chr4 (23-73)||(5048886-5048936)
chr4 (29-83)||(26186090-26186144)
chr4 (100-162)||(44380009-44380071)
chr4 (97-157)||(35682242-35682302)
chr4 (125-160)||(25617980-25618015)
chr4 (97-156)||(42375086-42375145)
chr4 (58-101)||(45591447-45591490)
chr4 (94-156)||(3862619-3862681)
chr4 (29-83)||(3862622-3862676)
chr4 (94-156)||(3871376-3871438)
chr4 (29-83)||(3871379-3871433)
chr4 (29-83)||(23444345-23444399)
chr4 (110-156)||(30709989-30710035)
chr4 (29-83)||(51265453-51265507)
chr4 (49-98)||(24006098-24006147)
chr4 (131-168)||(54716349-54716386)
chr4 (49-141)||(31532717-31532809)
[»] chr7 (27 HSPs)
chr7 (29-156)||(11016872-11016999)
chr7 (29-156)||(38975808-38975935)
chr7 (49-156)||(41018256-41018363)
chr7 (40-153)||(15027548-15027661)
chr7 (33-156)||(4290548-4290671)
chr7 (29-131)||(42628323-42628425)
chr7 (79-156)||(45231908-45231985)
chr7 (32-96)||(48000705-48000769)
chr7 (29-101)||(48000795-48000867)
chr7 (49-156)||(34854723-34854830)
chr7 (75-162)||(30217508-30217594)
chr7 (49-131)||(4649348-4649432)
chr7 (59-156)||(27028831-27028928)
chr7 (38-96)||(6225542-6225600)
chr7 (61-131)||(10419486-10419556)
chr7 (110-156)||(11016958-11017004)
chr7 (75-141)||(22764754-22764820)
chr7 (59-131)||(7671949-7672021)
chr7 (29-68)||(34854786-34854825)
chr7 (29-68)||(41018319-41018358)
chr7 (49-92)||(41084208-41084251)
chr7 (97-156)||(42628371-42628430)
chr7 (29-83)||(11016877-11016931)
chr7 (49-131)||(29053342-29053424)
chr7 (29-83)||(38975813-38975867)
chr7 (111-153)||(48000827-48000869)
chr7 (111-156)||(38975895-38975940)
[»] chr5 (35 HSPs)
chr5 (25-156)||(291100-291231)
chr5 (29-160)||(12913802-12913933)
chr5 (29-156)||(19655161-19655288)
chr5 (29-131)||(16971172-16971274)
chr5 (30-131)||(3899867-3899968)
chr5 (29-142)||(29699384-29699497)
chr5 (29-107)||(2953242-2953320)
chr5 (49-151)||(16439146-16439248)
chr5 (29-102)||(2093945-2094018)
chr5 (30-131)||(26662427-26662529)
chr5 (30-131)||(26934022-26934124)
chr5 (29-131)||(28818945-28819047)
chr5 (25-155)||(30117832-30117962)
chr5 (49-160)||(3180088-3180198)
chr5 (49-131)||(16802472-16802554)
chr5 (31-78)||(32485630-32485677)
chr5 (29-78)||(13312272-13312321)
chr5 (75-156)||(19598335-19598416)
chr5 (23-83)||(16439140-16439200)
chr5 (97-156)||(16971220-16971279)
chr5 (110-156)||(13312267-13312313)
chr5 (29-83)||(19598340-19598394)
chr5 (59-133)||(38134411-38134485)
chr5 (29-121)||(2356312-2356401)
chr5 (69-166)||(39031199-39031296)
chr5 (23-72)||(39031238-39031287)
chr5 (23-107)||(228402-228486)
chr5 (97-156)||(2953266-2953325)
chr5 (97-156)||(3899915-3899974)
chr5 (35-86)||(7009401-7009452)
chr5 (17-82)||(291092-291158)
chr5 (110-163)||(12913892-12913945)
chr5 (35-83)||(17849221-17849269)
chr5 (112-156)||(22083001-22083045)
chr5 (165-197)||(39777089-39777121)
[»] chr3 (25 HSPs)
chr3 (29-156)||(30734410-30734537)
chr3 (49-160)||(33689175-33689286)
chr3 (35-156)||(47492061-47492182)
chr3 (23-156)||(51046075-51046208)
chr3 (29-156)||(41752967-41753094)
chr3 (49-163)||(43139737-43139851)
chr3 (29-155)||(50524706-50524832)
chr3 (53-160)||(55223231-55223338)
chr3 (29-131)||(1801454-1801556)
chr3 (49-142)||(50549992-50550085)
chr3 (29-92)||(45103117-45103180)
chr3 (97-160)||(30734401-30734464)
chr3 (49-131)||(30476502-30476584)
chr3 (29-155)||(30580764-30580890)
chr3 (49-131)||(47677283-47677365)
chr3 (53-121)||(29031746-29031814)
chr3 (35-107)||(30904296-30904368)
chr3 (47-153)||(18321657-18321763)
chr3 (29-83)||(33689184-33689238)
chr3 (79-131)||(39385746-39385798)
chr3 (17-83)||(50549970-50550037)
chr3 (111-156)||(1801449-1801494)
chr3 (29-73)||(18321659-18321703)
chr3 (23-83)||(30580832-30580892)
chr3 (132-160)||(47677263-47677291)
[»] scaffold0586 (1 HSPs)
scaffold0586 (29-160)||(7055-7185)
[»] chr2 (26 HSPs)
chr2 (29-156)||(16514427-16514554)
chr2 (29-156)||(29508698-29508826)
chr2 (29-121)||(14229361-14229453)
chr2 (29-131)||(38933615-38933717)
chr2 (29-140)||(6721970-6722081)
chr2 (29-131)||(6217232-6217334)
chr2 (29-122)||(14470600-14470693)
chr2 (46-141)||(8534164-8534259)
chr2 (29-160)||(24115919-24116050)
chr2 (97-160)||(14470591-14470654)
chr2 (49-142)||(15011297-15011390)
chr2 (47-131)||(2893991-2894075)
chr2 (29-101)||(14892318-14892390)
chr2 (29-101)||(37961764-37961836)
chr2 (113-160)||(45213892-45213939)
chr2 (49-131)||(2828612-2828694)
chr2 (100-168)||(14892339-14892407)
chr2 (31-131)||(29925580-29925680)
chr2 (24-84)||(33018620-33018680)
chr2 (49-148)||(37762029-37762128)
chr2 (29-67)||(45213892-45213930)
chr2 (35-83)||(6721965-6722013)
chr2 (97-156)||(16514500-16514559)
chr2 (113-156)||(29508693-29508736)
chr2 (111-156)||(6217227-6217272)
chr2 (75-156)||(9173035-9173116)
[»] scaffold0016 (2 HSPs)
scaffold0016 (29-131)||(49711-49813)
scaffold0016 (97-156)||(49706-49765)
[»] chr6 (14 HSPs)
chr6 (29-131)||(24618609-24618711)
chr6 (29-160)||(17750902-17751032)
chr6 (29-107)||(12343152-12343230)
chr6 (49-163)||(551193-551307)
chr6 (29-107)||(13043509-13043587)
chr6 (62-156)||(24587464-24587558)
chr6 (49-131)||(10521877-10521959)
chr6 (29-83)||(24587469-24587523)
chr6 (49-98)||(2315332-2315381)
chr6 (74-131)||(31654333-31654390)
chr6 (97-160)||(17750978-17751041)
chr6 (29-84)||(24975760-24975815)
chr6 (110-156)||(24618604-24618650)
chr6 (25-85)||(7384492-7384552)
[»] scaffold0180 (2 HSPs)
scaffold0180 (29-101)||(19130-19202)
scaffold0180 (97-162)||(19119-19184)
[»] scaffold0161 (1 HSPs)
scaffold0161 (29-156)||(27228-27355)
[»] scaffold1033 (1 HSPs)
scaffold1033 (50-107)||(2265-2322)
[»] scaffold1029 (1 HSPs)
scaffold1029 (50-107)||(2265-2322)
[»] scaffold0536 (1 HSPs)
scaffold0536 (38-142)||(4909-5010)
[»] scaffold0047 (1 HSPs)
scaffold0047 (49-131)||(63785-63867)
[»] scaffold0481 (1 HSPs)
scaffold0481 (53-101)||(2919-2967)


Alignment Details
Target: chr8 (Bit Score: 84; Significance: 4e-40; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 5033291 - 5033164
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||   |||||| |||||||||||    
T  5033291 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatg 5033192  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||||||||| |||||||||||||    
T  5033191 tcaccaatgtcacccaactctatgtcac 5033164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 35440978 - 35441104
Alignment:
Q  30 tagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgt 129  Q
    |||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| ||||||    
T  35440978 tagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgt 35441077  T
Q  130 catcaatgtcaccaaactctatgtcac 156  Q
    || |||||||||| |||||||||||||    
T  35441078 caccaatgtcacccaactctatgtcac 35441104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 33841599 - 33841726
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||||||||| |||||||| | |||| |||||||||||||||||||||||||||| ||||   |||| | |||||||||||    
T  33841599 atagagttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattctgattggtcaatg 33841698  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||||||||| |||||||||||||    
T  33841699 tcaccaatgtcacccaactctatgtcac 33841726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 10086894 - 10086760
Alignment:
Q  22 tgatgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattg 121  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||| |||| ||| |||||||||||||||||||||||  |||   ||||||| ||||    
T  10086894 tgatgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattg 10086795  T
Q  122 gtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
      ||||||||  ||||||||| || ||||||||||    
T  10086794 accaatgtcactaatgtcacccaattctatgtcac 10086760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 45191135 - 45191262
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||||||| ||| |||| |||||||||| |||||||||  ||| |||||| ||||||||||||||||||||  |||| |||||| | |||||||||||    
T  45191135 atagagttggatgatattggtgacattgattaatcacaatgccacaatgcttatgaaagagagagaaacacaaacattgtaacattttgattggtcaatg 45191234  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||| ||| | |||||||||||||    
T  45191235 tcaccaatatcatccaactctatgtcac 45191262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 8243416 - 8243523
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||   |||||| ||||  ||| |||| |||||||||| |||||    
T  8243416 tgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaacgtcaccaatgtcacccaactc 8243515  T
Q  149 tatgtcac 156  Q
    ||||||||    
T  8243516 tatgtcac 8243523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 34229751 - 34229640
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||   ||||||| ||||    ||||||  ||||||||| |||||    
T  34229751 tgacattggtcaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattctgacattgtgattgactcatgtcactaatgtcacccaactc 34229652  T
Q  149 tatgtcacacaa 160  Q
    ||||||||||||    
T  34229651 tatgtcacacaa 34229640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 5667227 - 5667100
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||||| | |||||||| ||||||||  |||| ||||| |||  |||||||||||||||||||||| ||||| ||||  ||||||| ||||  |||||    
T  5667227 atagagtttgatgacattggtgacattggccaattacaatgtcataatgcttgtgaaagagagagaaatacaagcattgtgacattgtgattgaccaatg 5667128  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||||||| | |||||||||||||    
T  5667127 tcaccaatgtcatccaactctatgtcac 5667100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 43844473 - 43844604
Alignment:
Q  23 gatgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattgg 122  Q
    ||||| |||||||||||||| |||||||| |||| | ||||| ||| |||  ||||||||||  |||||||||||||||| ||||  ||||||| ||||     
T  43844473 gatgacatagagttgggtgatattgatgatattggttaatcataatgtcaggatgcttgtga--gagagagaaacacaagcattgtgacattgtgattga 43844570  T
Q  123 tcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    ||||| ||| |||||||| | |||||||||||||    
T  43844571 tcaatatcaccaatgtcatccaactctatgtcac 43844604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 39851091 - 39850983
Alignment:
Q  23 gatgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattgg 122  Q
    ||||| ||| ||||| ||||||||| ||||||||| |||||||||||| |  |||||||||||||||||||||||||||  ||||   |||||| |||||    
T  39851091 gatgacataaagttgagtgacattggtgacattgaccaatcacaatattataatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattgg 39850992  T
Q  123 tcaatgtca 131  Q
     ||||||||    
T  39850991 ccaatgtca 39850983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 8796552 - 8796425
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||| | ||||| |||| ||||||||| |||||| ||| |||| |||||||||||||| ||||||||||||| ||||  ||||||| ||||  ||||     
T  8796552 atagagctaggtgatattggtgacattgaccaatcaaaatgtcacaatgcttgtgaaagatagagaaacacaagcattgtgacattgtgattgaccaata 8796453  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    |||  ||| ||||| |||||||||||||    
T  8796452 tcacaaatatcacctaactctatgtcac 8796425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 6296739 - 6296633
Alignment:
Q  25 tgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtc 124  Q
    |||||||||||||| |||||||  |||||||  ||||| | ||| |||| || ||||||||||||||||||||||||| |||   ||||||| |||||||    
T  6296739 tgatatagagttggatgacattagtgacattagtcaattataatgtcacaatacttgtgaaagagagagaaacacaagcattatgacattgtgattggtc 6296640  T
Q  125 aatgtca 131  Q
    |||||||    
T  6296639 aatgtca 6296633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 4958708 - 4958599
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    ||||||||| |||||||||  |||| || ||||||||||||||||||||||||  |||   ||||||| ||||| ||||||||||||| ||| |||| ||    
T  4958708 tgacattgaccaatcacaag-tcacaatacttgtgaaagagagagaaacacaaacattatgacattgtgattggccaatgtcatcaatatca-caaattc 4958611  T
Q  149 tatgtcacacaa 160  Q
    ||||||||||||    
T  4958610 tatgtcacacaa 4958599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 34541831 - 34541889
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  34541831 tgacattggccaatcataatatcacaatgcttgtgaaagagagagaaacacaagcattg 34541889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 5033237 - 5033296
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| |||||||||||||    
T  5033237 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 5033296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 35031642 - 35031689
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaa 96  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||    
T  35031642 tgacattgatcaatcacaatgtcgcaatgcttgtgaaagagagagaaa 35031689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 5033169 - 5033223
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| ||||||||| ||||||||||  ||| |||||||||    
T  5033169 atagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtg 5033223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 5667186 - 5667232
Alignment:
Q  110 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  5667186 acattgtaattggccaatgtcaccaatgtcatcaaactctatgtcac 5667232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 43844599 - 43844545
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    |||||||||| |||||||| ||| |||||||||||||||| |||| |||||||||    
T  43844599 atagagttggatgacattggtgatattgatcaatcacaatgtcacaatgcttgtg 43844545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 5667105 - 5667158
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgt 82  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||| ||||||||    
T  5667105 atagagttggatgacattggtgacattggtcaatcacaatgtcacaatgcttgt 5667158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 10086846 - 10086891
Alignment:
Q  110 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtca 155  Q
    ||||||| |||||||||||||| |||||||||| ||||||||||||    
T  10086846 acattgtgattggtcaatgtcaccaatgtcacccaactctatgtca 10086891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 2581895 - 2581828
Alignment:
Q  89 gagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||||||||||| ||||   |||||| ||||| |||||||| |||||||||| || ||||||||||    
T  2581895 gagagaaacacaagcattgtggcattgtgattggccaatgtcaacaatgtcacccaattctatgtcac 2581828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 33841653 - 33841594
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||  ||| ||| |||||||||||||| |||||||||| |||||||||||||    
T  33841653 cacaagcattgtgacaatgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 33841594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 35441031 - 35440972
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| ||||||| |||||    
T  35441031 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctaagtcac 35440972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 8243518 - 8243464
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| |||| ||| |||||||||||  ||| |||||||||    
T  8243518 atagagttgggtgacattggtgacgttggtcaatcacaatgccacaatgcttgtg 8243464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 33841721 - 33841667
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| ||||||||| |||||| |||  ||| |||||||||    
T  33841721 atagagttgggtgacattggtgacattgaccaatcagaatgccacaatgcttgtg 33841667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 35441099 - 35441045
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| ||||||||  ||||||||||  ||| |||||||||    
T  35441099 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 35441045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 31159972 - 31159903
Alignment:
Q  38 ggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    ||||| |||| |||||||   |||||| ||| |||| |||||||||||||||||||||||| || |||||    
T  31159972 ggtgatattggtgacattcgccaatcataatgtcacaatgcttgtgaaagagagagaaacaaaaatattg 31159903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 4e-40; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 48993925 - 48994052
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||   |||||| |||||||||||    
T  48993925 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatg 48994024  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||||||||| |||||||||||||    
T  48994025 tcaccaatgtcacccaactctatgtcac 48994052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 29179599 - 29179732
Alignment:
Q  23 gatgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattgg 122  Q
    ||||| ||||||||||||||||||| ||||| ||| |||||||||| |||| |||||||||||||||||||||||||||| ||||   |||||| |||||    
T  29179599 gatgacatagagttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgg 29179698  T
Q  123 tcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
     |||||||| |||||||||| |||||||||||||    
T  29179699 ccaatgtcaccaatgtcacccaactctatgtcac 29179732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 9157420 - 9157309
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||  ||||||| |||||||||||| | |||||||||| |||||    
T  9157420 tgacattgatcaatcacaatatcacaatgcttgagaaagagagagaaacacaagcattgtgacattgtgattggtcaatgttaccaatgtcacccaactc 9157321  T
Q  149 tatgtcacacaa 160  Q
    ||||||||||||    
T  9157320 tatgtcacacaa 9157309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 32540756 - 32540883
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| || |||||  |||||||||| |||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  32540756 atagagttgggtgacattggtggcattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtaacattgtgattggtcaatg 32540855  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||||||| | || ||||||||||    
T  32540856 tcaccaatgtcatccaattctatgtcac 32540883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 17127568 - 17127699
Alignment:
Q  25 tgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtc 124  Q
    |||||||||||| |||||||||  ||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||  ||||| | |||||||    
T  17127568 tgatatagagttaggtgacattagtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattttgattggtc 17127667  T
Q  125 aatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||||  ||||||||| |||||||| ||||    
T  17127668 aatgtcactaatgtcacctaactctatatcac 17127699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 5995499 - 5995372
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||||||| |||||||| ||||||||| ||||||||||  ||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||    
T  5995499 atagagttggatgacattggtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 5995400  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    | | |||||||| |||||||||||||||    
T  5995399 ttaccaatgtcatcaaactctatgtcac 5995372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 33219703 - 33219599
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||||||| |||||||| |||||||||||||||||||| |||  |||||||||||||||||| ||||||||| |||| |||||||| |||| ||||||    
T  33219703 atagagttggatgacattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagaaaaacacaagcattgtaacattgtgattgatcaatg 33219604  T
Q  129 tcatc 133  Q
    |||||    
T  33219603 tcatc 33219599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 37155156 - 37155049
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    ||||||||  |||||||||| |||| || ||||||||||||||||||||||||| ||||  ||||||| ||||| |||||||| ||||||||||||||||    
T  37155156 tgacattggccaatcacaatgtcacaatacttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcaccaatgtcaccaaactc 37155057  T
Q  149 tatgtcac 156  Q
    ||||||||    
T  37155056 tatgtcac 37155049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 36290455 - 36290552
Alignment:
Q  69 atcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatacta 166  Q
    ||||| ||||||||||||||||||||||||||| |||||  ||||||| ||||||||||| || |||||||||| ||||||||||||| ||| |||||    
T  36290455 atcacaatgcttgtgaaagagagagaaacacaaatattgtgacattgtgattggtcaatgccaccaatgtcacccaactctatgtcacccaagtacta 36290552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 4609106 - 4608995
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||||||||  ||||  ||||||| || ||||||||||| | |||||||| |||||    
T  4609106 tgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgatgggtcaatgtcaccgatgtcacccaactc 4609007  T
Q  149 tatgtcacacaa 160  Q
     || ||||||||    
T  4609006 catatcacacaa 4608995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 1091582 - 1091679
Alignment:
Q  59 caatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||||||| |||| |||||||||||||||||||||||||||  ||||  ||||||| ||||||||| |||| |||| ||||| |||||||||||||    
T  1091582 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggtcaaagtcaccaatatcacccaactctatgtcac 1091679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 44706838 - 44706926
Alignment:
Q  75 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaata 163  Q
    |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  44706838 atgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaaata 44706926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 15220941 - 15220863
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    ||||||||||||||||||| ||| ||||  |||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  15220941 atagagttgggtgacattggtgatattggccaatcacaatctcacaatgcttgtgaaagagagagaaacacaagcattg 15220863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 29371498 - 29371396
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||| | |||||||||| ||| ||||| |||||||||| |||| |||||||||||||||||||||||||||  ||||  ||||||| ||||| |||||    
T  29371498 atagagctaggtgacattggtgatattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatg 29371399  T
Q  129 tca 131  Q
    |||    
T  29371398 tca 29371396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 45728396 - 45728294
Alignment:
Q  50 gacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactct 149  Q
    ||||||| ||||||||||| |||  |||||||||||||||||||||||||||| ||||  | ||||| |||||||||| ||| |||| ||||| ||||||    
T  45728396 gacattggtcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatatcaccaatatcacccaactct 45728297  T
Q  150 atg 152  Q
    |||    
T  45728296 atg 45728294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 46333972 - 46334058
Alignment:
Q  47 gatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatc 133  Q
    ||||||||||  |||||||||| |||| |||||||||||||||||| ||||||||| ||||  ||||||| ||||||||||||||||    
T  46333972 gatgacattggccaatcacaatgtcacaatgcttgtgaaagagagaaaaacacaagcattgtgacattgtgattggtcaatgtcatc 46334058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 49444921 - 49445021
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| |||||| ||||||||||||| | || |||||||||  ||||||||||||||||| ||||   |||||| ||||| |||||    
T  49444921 atagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtg--agagagagaaacacaagcattgtggcattgtgattggccaatg 49445018  T
Q  129 tca 131  Q
    |||    
T  49445019 tca 49445021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 1819517 - 1819570
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaag 102  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  1819517 tgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaag 1819570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 21630118 - 21630045
Alignment:
Q  83 gaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||||||||||||||||| ||||  ||||||| |||||||||||||| |||||||||| |||| ||||||||    
T  21630118 gaaagagagagaaacacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactttatgtcac 21630045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 48498525 - 48498418
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||||||||||  ||||    ||| | ||||  ||||||||  ||||||||| |||||    
T  48498525 tgacattgaccaatcacaatgttaccatgcttgtgaaagagagagaaacacaaacattgtggtattatgattgaccaatgtcacaaatgtcacccaactc 48498426  T
Q  149 tatgtcac 156  Q
    ||||||||    
T  48498425 tatgtcac 48498418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 5694918 - 5694999
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    |||||||| ||||||||||||| |  ||||||||||||||||||||||||||| |||||  ||||||||||||  ||||||||    
T  5694918 tgacattggtcaatcacaatattaa-atgcttgtgaaagagagagaaacacaaatattgtgacattgtaattgaccaatgtca 5694999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 8337879 - 8337961
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    |||||||| ||||||||||| |||| ||| |||||||||||||||||||||||  ||||   |||||| ||||||||||||||    
T  8337879 tgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtggcattgtgattggtcaatgtca 8337961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 28395708 - 28395628
Alignment:
Q  88 agagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatactacc 168  Q
    ||||||||||||||| ||||  ||||||| |||||||||||||| |||||||||  |||||||||| || ||||| |||||    
T  28395708 agagagaaacacaagcattgtgacattgtgattggtcaatgtcaccaatgtcactcaactctatgttacccaaatgctacc 28395628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 741530 - 741597
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgt 116  Q
    ||||||||  |||||||||| |||| |||||||||||||||||||||||||||| ||||  |||||||    
T  741530 tgacattgcccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgt 741597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 34062319 - 34062237
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    ||||||||| |||||||||| |||| ||| |||||||||||||||||||| ||| ||||   |||||| ||||| ||||||||    
T  34062319 tgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacataagcattgtggcattgtgattggccaatgtca 34062237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 47303505 - 47303427
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaat 127  Q
    |||||||| ||||||||||| |||| ||| |||||||||||||||||||||||  |||   ||||||| ||||||||||    
T  47303505 tgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattggtcaat 47303427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 48604975 - 48605057
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    |||||||| ||||||||||| |||| ||  ||||||||||||||||||| |||| ||||  ||||| ||||||| ||||||||    
T  48604975 tgacattggtcaatcacaatgtcacaatatttgtgaaagagagagaaacgcaagcattgtgacattataattggccaatgtca 48605057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 48993979 - 48993920
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| |||||||||||||    
T  48993979 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 48993920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 9157318 - 9157372
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| | ||||||| |||||||||| |||| |||||||||    
T  9157318 atagagttgggtgacattggtaacattgaccaatcacaatgtcacaatgcttgtg 9157372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 21630054 - 21630104
Alignment:
Q  33 agttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||| ||||||||| |||||||||| |||| |||||||||    
T  21630054 agttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 21630104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 45728295 - 45728349
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    |||||||||||||| |||| ||| ||||| ||||||||||||||| |||||||||    
T  45728295 atagagttgggtgatattggtgatattgaccaatcacaatatcacaatgcttgtg 45728349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 48994047 - 48993993
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| ||||||||| ||||||||||  ||| |||||||||    
T  48994047 atagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtg 48993993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 19711208 - 19711313
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    ||||||||| |||||||||| | || |||| ||||||||||  ||||||| ||| ||||  ||||||||||  | |||||| | |||||||||||||||     
T  19711208 tgacattgaccaatcacaatgttacaatgcatgtgaaagag--agaaacataagaattgtgacattgtaatcagccaatgttaccaatgtcaccaaactt 19711305  T
Q  149 tatgtcac 156  Q
    ||| ||||    
T  19711306 tatatcac 19711313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 28928807 - 28928859
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaa 101  Q
    ||||||||  |||||||||| ||||  ||||||||||||||||||||||||||    
T  28928807 tgacattggccaatcacaatgtcacagtgcttgtgaaagagagagaaacacaa 28928859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 17127626 - 17127563
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 160  Q
    |||||| ||||  ||||||| ||||||||||||||  ||||||||| |||||||| ||||||||    
T  17127626 cacaagcattgtgacattgtgattggtcaatgtcactaatgtcacctaactctatatcacacaa 17127563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 29371444 - 29371507
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 160  Q
    |||||| ||||  ||||||| |||||||||| ||| |||||||||| | |||||||||||||||    
T  29371444 cacaagcattgtgacattgtgattggtcaatatcaccaatgtcacctagctctatgtcacacaa 29371507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 49444975 - 49444916
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| |||| |||||||| |||| || |||||| |||||||||| |||||||||||||    
T  49444975 cacaagcattgtaacattgtgattgatcgatgtcaccaatgtcacccaactctatgtcac 49444916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 17127698 - 17127640
Alignment:
Q  25 tgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    |||||||||||| |||||||||  ||||||||| |||||| ||| |||| |||||||||    
T  17127698 tgatatagagttaggtgacattagtgacattgaccaatcaaaatgtcacaatgcttgtg 17127640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 29179659 - 29179601
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtca 155  Q
    |||||| ||||  ||||||| |||||||| ||||| |||||||||| ||||||||||||    
T  29179659 cacaagcattgtgacattgtgattggtcagtgtcaccaatgtcacccaactctatgtca 29179601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 29179727 - 29179673
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| ||||||||  ||||||||||  ||| |||||||||    
T  29179727 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 29179673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 5995459 - 5995504
Alignment:
Q  111 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| |||||||||||||| |||||||| | |||||||||||||    
T  5995459 cattgtgattggtcaatgtcaccaatgtcatccaactctatgtcac 5995504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 46932045 - 46932000
Alignment:
Q  111 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  46932045 cattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 46932000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 46932072 - 46932116
Alignment:
Q  111 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||    
T  46932072 cattgtgattggtcaatgtcaccaatgtcacc-aactctatgtcac 46932116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 15220902 - 15220958
Alignment:
Q  112 attgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatactacc 168  Q
    ||||| ||||| |||| ||| |||||||||| ||||||||||||| ||||| |||||    
T  15220902 attgtgattggccaatatcaccaatgtcacccaactctatgtcacccaaatgctacc 15220958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 36290537 - 36290493
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcac 73  Q
    ||||||||||||||||||| || |||||| |||||||||| ||||    
T  36290537 atagagttgggtgacattggtggcattgaccaatcacaatgtcac 36290493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 23444277 - 23444411
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||    
T  23444277 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 23444376  T
Q  129 tcatcaatgtcaccaaactctatgtcacacaaata 163  Q
    ||| |||||||||| ||||||||||||| ||||||    
T  23444377 tcaccaatgtcacccaactctatgtcacccaaata 23444411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 51265574 - 51265448
Alignment:
Q  30 tagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgt 129  Q
    |||||||||||||||||| ||||||||| |||||| ||| |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| ||||||    
T  51265574 tagagttgggtgacattggtgacattgaccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgt 51265475  T
Q  130 catcaatgtcaccaaactctatgtcac 156  Q
    || |||||||||| |||||||||||||    
T  51265474 caccaatgtcacccaactctatgtcac 51265448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 47661972 - 47661859
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||    
T  47661972 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 47661873  T
Q  129 tcatcaatgtcacc 142  Q
    ||| ||||||||||    
T  47661872 tcaccaatgtcacc 47661859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 35682296 - 35682169
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||||| |||||||||| ||||||||| | |||||||| |||| |||||||||||||| |||||||||||||||||   ||||||| ||||| |||||    
T  35682296 atagagttaggtgacattggtgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatg 35682197  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||| ||||| |||||||||||||    
T  35682196 tcaccaatatcacctaactctatgtcac 35682169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 6271832 - 6271705
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||| |||| |||| ||||||||  |||||||||| |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||    
T  6271832 atagagttgagtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 6271733  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||| ||||| |||||||||||||    
T  6271732 tcaccaatatcacccaactctatgtcac 6271705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 42375140 - 42375062
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  42375140 atagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 42375062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 47762734 - 47762601
Alignment:
Q  33 agttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcat 132  Q
    |||||| ||| |||| |||||||| |||| || ||| |||| |||||||||||||||||||||||| ||  |||| |||||||| ||||||||||||||     
T  47762734 agttggatgatattggtgacattggtcaaccataatgtcacaatgcttgtgaaagagagagaaacataaacattgtaacattgtgattggtcaatgtcac 47762635  T
Q  133 caatgtcaccaaactctatgtcacacaaatacta 166  Q
     ||| ||||  | ||||||||||| |||||||||    
T  47762634 aaatatcactcagctctatgtcacccaaatacta 47762601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 26186044 - 26186149
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    |||||||| ||||||||||| |||| |||||||||||||||  ||||||||||| ||||  | ||||| ||||| ||||||||||||||| ||| |||||    
T  26186044 tgacattggtcaatcacaatgtcacaatgcttgtgaaagag--agaaacacaagcattgtgaaattgtgattggccaatgtcatcaatgttacccaactc 26186141  T
Q  149 tatgtcac 156  Q
    ||||||||    
T  26186142 tatgtcac 26186149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 25818387 - 25818453
Alignment:
Q  35 ttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaa 101  Q
    |||||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||||||||||||    
T  25818387 ttgggtgacattgatgacattggtcaatcacaatgtcacaatgattgtgaaagagagagaaacacaa 25818453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 53954740 - 53954638
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||||||||  |||| ||||| |||| ||||||||||||||| ||||||||| || ||||  ||||||| ||||| |||||    
T  53954740 atagagttgggtgacattggtgacattgtccaattacaatgtcacaatgcttgtgaaagagtgagaaacactagcattgtgacattgtgattggccaatg 53954641  T
Q  129 tca 131  Q
    |||    
T  53954640 tca 53954638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 30861822 - 30861909
Alignment:
Q  69 atcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    ||||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||| ||| | |||||||||||||    
T  30861822 atcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatatcatccaactctatgtcac 30861909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 28693949 - 28694003
Alignment:
Q  47 gatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaa 101  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  28693949 gatgacattgaccaatcacaatatcacaatgtttgtgaaagagagagaaacacaa 28694003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 44380060 - 44379934
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||| ||||||||| ||| ||||| |||||||||| | || || ||| | ||| |||||||||| |||| ||||  ||||| ||||||| |||||    
T  44380060 atagagttgagtgacattggtgatattgaccaatcacaatgttacaatacttataaaatagagagaaacgcaagcattgtgacattataattggccaatg 44379961  T
Q  129 tcatcaatgtcaccaaactctatgtca 155  Q
    ||  |||||||||  ||||||||||||    
T  44379960 tcgccaatgtcactcaactctatgtca 44379934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 55090024 - 55090106
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||| ||||||| ||||  ||||||| ||||  ||||||||    
T  55090024 tgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagagacacaagcattgtgacattgtgattgaccaatgtca 55090106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 40789279 - 40789207
Alignment:
Q  59 caatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    |||||||||| |||| |||||||||||||||||||||||||||  ||||  ||||||| ||||| ||||||||    
T  40789279 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtca 40789207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 2325068 - 2325115
Alignment:
Q  109 aacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  2325068 aacattgtgatttgtcaatgtcatcaatgtcaccaaactctatgtcac 2325115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 47661918 - 47661989
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatactacc 168  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| ||||||||||||| ||||| |||||    
T  47661918 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaaatgctacc 47661989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 47404613 - 47404671
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  47404613 tgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacccaagcattg 47404671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 50384133 - 50384191
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    ||||||||  |||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  50384133 tgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 50384191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 31430489 - 31430541
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaa 101  Q
    ||||||||| |||||||||| |||| |||||| ||||||||||||||||||||    
T  31430489 tgacattgaccaatcacaatgtcacaatgcttatgaaagagagagaaacacaa 31430541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 52028659 - 52028607
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaa 101  Q
    ||||||||  |||||||||| |||| |||||||||||||||||||||||||||    
T  52028659 tgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 52028607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 53954686 - 53954746
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcaca 157  Q
    |||||| ||||  ||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  53954686 cacaagcattgtgacattgtaattggacaatgtcaccaatgtcacccaactctatgtcaca 53954746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 23444331 - 23444260
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatactacc 168  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| |||||||||| || ||||| |||||    
T  23444331 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgttacccaaatgctacc 23444260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 5048936 - 5048886
Alignment:
Q  23 gatgatatagagttgggtgacattgatgacattgatcaatcacaatatcac 73  Q
    ||||| |||||||||||||||||||||||||||| ||||||| ||| ||||    
T  5048936 gatgacatagagttgggtgacattgatgacattggtcaatcataatgtcac 5048886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 26186144 - 26186090
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    |||||||||||| |||||||||||||||  |||||||||| |||| |||||||||    
T  26186144 atagagttgggtaacattgatgacattggccaatcacaatttcacaatgcttgtg 26186090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 44380009 - 44380071
Alignment:
Q  100 aagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaat 162  Q
    |||||||| |||||||| |||||||||| ||| |||||||||  ||||||||||||| |||||    
T  44380009 aagtattgtaacattgtgattggtcaatatcaccaatgtcactcaactctatgtcacccaaat 44380071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 35682242 - 35682302
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcaca 157  Q
    |||||| ||||  ||||||| || ||||||||||| |||||||||| ||||||||||||||    
T  35682242 cacaagcattgtgacattgtgatcggtcaatgtcaccaatgtcacctaactctatgtcaca 35682302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 25618015 - 25617980
Alignment:
Q  125 aatgtcatcaatgtcaccaaactctatgtcacacaa 160  Q
    |||||||||||||||||| |||||||||||||||||    
T  25618015 aatgtcatcaatgtcacccaactctatgtcacacaa 25617980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 42375086 - 42375145
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||  ||||||| |||| ||||||||| |||||||||| |||||||||||||    
T  42375086 cacaagcattgtgacattgtgattgatcaatgtcaccaatgtcacccaactctatgtcac 42375145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 45591447 - 45591490
Alignment:
Q  58 tcaatcacaatatcaccatgcttgtgaaagagagagaaacacaa 101  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||    
T  45591447 tcaatcataatgtcacaatgcttgtgaaagagagagaaacacaa 45591490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 3862619 - 3862681
Alignment:
Q  94 aaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    ||||||||| ||||   |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  3862619 aaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 3862681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 3862676 - 3862622
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| ||||||||  ||||||||||  ||| |||||||||    
T  3862676 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 3862622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 3871376 - 3871438
Alignment:
Q  94 aaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    ||||||||| ||||   |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  3871376 aaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 3871438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 3871433 - 3871379
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| ||||||||  ||||||||||  ||| |||||||||    
T  3871433 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 3871379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 23444399 - 23444345
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| ||||||||  ||||||||||  ||| |||||||||    
T  23444399 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 23444345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 30709989 - 30710035
Alignment:
Q  110 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    ||||||| ||||| |||||||| |||||||||| |||||||||||||    
T  30709989 acattgtgattggccaatgtcaccaatgtcacctaactctatgtcac 30710035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 51265453 - 51265507
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| ||||||||  ||||||||||  ||| |||||||||    
T  51265453 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 51265507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 24006098 - 24006147
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaaca 98  Q
    ||||||||  ||||||||||  ||| ||||||||||||||||||||||||    
T  24006098 tgacattggccaatcacaatgacacaatgcttgtgaaagagagagaaaca 24006147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 54716386 - 54716349
Alignment:
Q  131 atcaatgtcaccaaactctatgtcacacaaatactacc 168  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  54716386 atcaatgtcacccaactctatgtcactcaaatactacc 54716349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 31532717 - 31532809
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcac 141  Q
    |||||||| ||||||||||| |||| ||   ||| ||||||||||||| ||||  ||||  || |||| |||||||||||||| | |||||||    
T  31532717 tgacattgttcaatcacaatgtcacaatatatgtaaaagagagagaaatacaaacattgtgacgttgtgattggtcaatgtcacctatgtcac 31532809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 11016999 - 11016872
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||| ||| |||||||||||||||||||||||| ||||   |||||| ||||| |||||    
T  11016999 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 11016900  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||||||||| |||||||||||||    
T  11016899 tcaccaatgtcacccaactctatgtcac 11016872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 38975935 - 38975808
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||||| |||||||||| |||||||||||||| | |||  ||| |||||||||||||||||||||||||||| ||||   |||||| ||||  |||||    
T  38975935 atagagttaggtgacattggtgacattgatcaattataatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatg 38975836  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    | | |||||||||| |||||||||||||    
T  38975835 ttaccaatgtcacccaactctatgtcac 38975808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 41018256 - 41018363
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    ||||||||  |||||||||| || | |||||||||||||||||||||||| ||| ||||   |||||| |||||||||||||| |||||||||| |||||    
T  41018256 tgacattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactc 41018355  T
Q  149 tatgtcac 156  Q
    ||||||||    
T  41018356 tatgtcac 41018363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 15027661 - 15027548
Alignment:
Q  40 tgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtc 139  Q
    |||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||  ||||    ||||| |||||||||||||| |||||||    
T  15027661 tgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggtattgtgattggtcaatgtcaccaatgtc 15027562  T
Q  140 accaaactctatgt 153  Q
    |   ||||||||||    
T  15027561 aaacaactctatgt 15027548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 4290671 - 4290548
Alignment:
Q  33 agttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcat 132  Q
    ||||||||||||||| ||||||||  |||||||||| |||| || |||||||||||||||||||||| || ||||   |||||| ||||  |||| |||     
T  4290671 agttgggtgacattggtgacattggccaatcacaatgtcacaattcttgtgaaagagagagaaacacgagcattgtggcattgtgattgaccaatatcac 4290572  T
Q  133 caatgtcaccaaactctatgtcac 156  Q
    |||| ||||| |||||||||||||    
T  4290571 caatatcacccaactctatgtcac 4290548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 42628425 - 42628323
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||| ||||  |||||||||| || | |||||||||||||||||||||||| ||| ||||   |||||| |||||||||||    
T  42628425 atagagttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatg 42628326  T
Q  129 tca 131  Q
    |||    
T  42628325 tca 42628323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 45231908 - 45231985
Alignment:
Q  79 ttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||||||||||||||||| ||| |||| |||||||| ||||| |||||||| |||||||||| |||||||||||||    
T  45231908 ttgtgaaagagagagaaacaaaagcattgtaacattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 45231985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 48000705 - 48000769
Alignment:
Q  32 gagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaa 96  Q
    |||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  48000705 gagttgggtgacattggtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaa 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 48000867 - 48000795
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaa 101  Q
    ||||||||||||||||||| ||||||||| ||||||||||  ||| |||  ||||||||||||||||||||||    
T  48000867 atagagttgggtgacattggtgacattgaccaatcacaatgccacaatgtctgtgaaagagagagaaacacaa 48000795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 34854723 - 34854830
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    ||||||||  ||||||||||  ||| |||||||||||||||| ||||||||||  ||||   |||||| ||||  |||||||| |||||||||| |||||    
T  34854723 tgacattggccaatcacaatgccacaatgcttgtgaaagagatagaaacacaaacattgtggcattgtgattgaccaatgtcaccaatgtcacccaactc 34854822  T
Q  149 tatgtcac 156  Q
    ||||||||    
T  34854823 tatgtcac 34854830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 30217508 - 30217594
Alignment:
Q  75 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaat 162  Q
    |||||||||||||||||||||||| ||  |||   | ||||| |||||  |||||||||||||||| |||||||||||||||||||||    
T  30217508 atgcttgtgaaagagagagaaacataaacattttgatattgtgattggcgaatgtcatcaatgtca-caaactctatgtcacacaaat 30217594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 4649432 - 4649348
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagaga--gagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    |||||||| ||||||||||| |||| ||||||||||||||||  |||||||||||| |||| | |||||| ||||  ||||||||    
T  4649432 tgacattggtcaatcacaatgtcacgatgcttgtgaaagagagagagaaacacaagcattgtagcattgtgattgaccaatgtca 4649348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 27028831 - 27028928
Alignment:
Q  59 caatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||||||| |||| |||||| ||||||||||||||||||||  ||||  ||||||| ||||  |||||||| |||  ||||| || ||||||||||    
T  27028831 caatcacaatgtcacaatgcttctgaaagagagagaaacacaaacattgtgacattgtgattgaccaatgtcaccaacatcacccaagtctatgtcac 27028928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 6225542 - 6225600
Alignment:
Q  38 ggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaa 96  Q
    |||||||||||||||||| |||||||||||| ||||  | ||| |||||||||||||||    
T  6225542 ggtgacattgatgacattaatcaatcacaatgtcacggtccttatgaaagagagagaaa 6225600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 10419556 - 10419486
Alignment:
Q  61 atcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    |||||||| |||| |  |||||||||||||||||||||||||||||| |||||| | ||||  ||||||||    
T  10419556 atcacaatgtcacaaaacttgtgaaagagagagaaacacaagtattgtaacattatgattgaccaatgtca 10419486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 11016958 - 11017004
Alignment:
Q  110 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    ||||||| |||||||||||||| |||||||||| |||||||||||||    
T  11016958 acattgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 11017004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 22764754 - 22764820
Alignment:
Q  75 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcac 141  Q
    |||||||||||||||||||||||||||  ||||  ||||||| ||||| |||| ||| |||||||||    
T  22764754 atgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatatcaccaatgtcac 22764820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 7671949 - 7672021
Alignment:
Q  59 caatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    ||||||||||  ||| |||||||||||||||||||||||||||  ||||   |||||| ||||| ||||||||    
T  7671949 caatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtca 7672021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 34854825 - 34854786
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaat 68  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  34854825 atagagttgggtgacattggtgacattggtcaatcacaat 34854786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 41018358 - 41018319
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaat 68  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  41018358 atagagttgggtgacattggtgacattgaccaatcacaat 41018319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 41084208 - 41084251
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagaga 92  Q
    |||||||||||||||| |||||||| || |||||||||||||||    
T  41084208 tgacattgatcaatcataatatcacaatccttgtgaaagagaga 41084251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 42628371 - 42628430
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||| ||||||| ||||| |||| ||| |||||||||| |||||||||||||    
T  42628371 cacaagcattgggacattgtgattggccaatatcaccaatgtcacccaactctatgtcac 42628430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 11016877 - 11016931
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| ||||||||  ||||||||||  ||| |||||||||    
T  11016877 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 11016931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 29053342 - 29053424
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    ||||||||  ||||||||||  | | |||||||||||||||||||||||||||  ||||   |||||| ||||| ||||||||    
T  29053342 tgacattggccaatcacaatgcctcaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtca 29053424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 38975813 - 38975867
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||| | |||||| |||||||||||  ||| |||||||||    
T  38975813 atagagttgggtgacattggtaacattggtcaatcacaatgccacaatgcttgtg 38975867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 48000827 - 48000869
Alignment:
Q  111 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgt 153  Q
    |||||| |||||||||||||| |||||||||| ||||||||||    
T  48000827 cattgtgattggtcaatgtcaccaatgtcacccaactctatgt 48000869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 38975895 - 38975940
Alignment:
Q  111 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||| |||||| ||||||||| |||||||||| |||||||||||||    
T  38975895 cattataattgatcaatgtcaccaatgtcacctaactctatgtcac 38975940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 156
Target Start/End: Complemental strand, 291231 - 291100
Alignment:
Q  25 tgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtc 124  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||| ||||| ||||| ||||   |||||| ||||| |    
T  291231 tgatatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagaaagaaatacaagcattgtggcattgtgattggcc 291132  T
Q  125 aatgtcatcaatgtcaccaaactctatgtcac 156  Q
    ||||||| |||||||||| |||||||||||||    
T  291131 aatgtcaccaatgtcacccaactctatgtcac 291100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 12913933 - 12913802
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||| |||| ||||||||||| |||  |||||||||||||||||||| ||||||| ||||  ||||||| ||||| |||||    
T  12913933 atagagttgggtgacattggtgatattggtcaatcacaatgtcataatgcttgtgaaagagagagatacacaagaattgtgacattgtgattggccaatg 12913834  T
Q  129 tcatcaatgtcaccaaactctatgtcacacaa 160  Q
    ||| |||||||||  |||| ||||||||||||    
T  12913833 tcaccaatgtcactcaactatatgtcacacaa 12913802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 19655288 - 19655161
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||| ||||||||| ||||||||  |||||||||| |||| |||||||||||||||||||||||||||  ||||   |||||| ||||| |||||    
T  19655288 atagagttgagtgacattggtgacattgtccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatg 19655189  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||||||||| |||||||||||||    
T  19655188 tcaccaatgtcacccaactctatgtcac 19655161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 16971274 - 16971172
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||    
T  16971274 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 16971175  T
Q  129 tca 131  Q
    |||    
T  16971174 tca 16971172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 3899968 - 3899867
Alignment:
Q  30 tagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgt 129  Q
    |||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| ||||||    
T  3899968 tagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgt 3899869  T
Q  130 ca 131  Q
    ||    
T  3899868 ca 3899867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 29699497 - 29699384
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||||||||||| |||| ||||||||  |||||||||| |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||    
T  29699497 atagagttgggtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 29699398  T
Q  129 tcatcaatgtcacc 142  Q
    ||| ||||||||||    
T  29699397 tcaccaatgtcacc 29699384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 2953320 - 2953242
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    ||||||||||||||||||| ||||||||  |||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  2953320 atagagttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 2953242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 16439248 - 16439146
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||  ||||||| ||||  |||||||| |||| | ||| |||||    
T  16439248 tgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcaccaatattacccaactc 16439149  T
Q  149 tat 151  Q
    |||    
T  16439148 tat 16439146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 2093945 - 2094018
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaag 102  Q
    |||||||||||||| |||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  2093945 atagagttgggtgatattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagagaaacacaag 2094018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 26662529 - 26662427
Alignment:
Q  30 tagagttgggtgacattgatgacattgatcaa-tcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||| |||| |||||||| |||| ||||||| |||| || ||||||||| ||||||||||||||| | || |||||||| |||||||||||    
T  26662529 tagagttgggtgatattggtgacattggtcaaatcacaatgtcacaatacttgtgaaaaagagagaaacacaagcaatgtaacattgtgattggtcaatg 26662430  T
Q  129 tca 131  Q
    |||    
T  26662429 tca 26662427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 26934124 - 26934022
Alignment:
Q  30 tagagttgggtgacattgatgacattgatcaa-tcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||| |||| |||||||| |||| ||||||| |||| || ||||||||| ||||||||||||||| | || |||||||| |||||||||||    
T  26934124 tagagttgggtgatattggtgacattggtcaaatcacaatgtcacaatacttgtgaaaaagagagaaacacaagcaatgtaacattgtgattggtcaatg 26934025  T
Q  129 tca 131  Q
    |||    
T  26934024 tca 26934022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 28819047 - 28818945
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||| |||| |||| |||||||| ||||||| ||| |||| |||||||||||||||||||||| ||||||||||  ||||||| ||||  |||||    
T  28819047 atagagttgagtgatattggtgacattggtcaatcataatgtcacaatgcttgtgaaagagagagaaatacaagtattgtgacattgtgattgaccaatg 28818948  T
Q  129 tca 131  Q
    |||    
T  28818947 tca 28818945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 30117832 - 30117962
Alignment:
Q  25 tgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtc 124  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||| |||| ||| || ||||| ||||||||||||||| ||||   |||| | ||||  |    
T  30117832 tgatatagagttgggtgacattggtgatattgaccaatcacaatgtcacaatgtttatgaaaaagagagaaacacaagcattgtggcattatgattgacc 30117931  T
Q  125 aatgtcatcaatgtcaccaaactctatgtca 155  Q
    ||| ||| |||||||| | ||||||||||||    
T  30117932 aatatcaccaatgtcatccaactctatgtca 30117962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 160
Target Start/End: Original strand, 3180088 - 3180198
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    |||||||||||||||| ||| |||| ||| |||||||||||||||||||||||| ||||   |||||| ||||  |||||||| |||||| ||| |||||    
T  3180088 tgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgtcaccaatgttacc-aactc 3180186  T
Q  149 tatgtcacacaa 160  Q
    ||||| ||||||    
T  3180187 tatgtgacacaa 3180198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 16802554 - 16802472
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    ||||||||| |||||| ||| |||| |||||||| |||||||||||||||||| |||||  ||||||| ||||| ||||||||    
T  16802554 tgacattgaccaatcagaatgtcacaatgcttgtaaaagagagagaaacacaaatattgttacattgtgattggccaatgtca 16802472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 32485677 - 32485630
Alignment:
Q  31 agagttgggtgacattgatgacattgatcaatcacaatatcaccatgc 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  32485677 agagttgggtgacattggtgacattgatcaatcacaatatcacaatgc 32485630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 13312272 - 13312321
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgc 78  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  13312272 atagagttaggtgacattgatgacattgatcaatcacaatgtcacaatgc 13312321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 19598416 - 19598335
Alignment:
Q  75 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||||||||||||||||||||||||| ||||    ||||| ||||  |||||||| |||||| ||| |||||||||||||    
T  19598416 atgcttgtgaaagagagagaaacacaagcattgtggtattgtgattgaccaatgtcaccaatgttacccaactctatgtcac 19598335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 16439140 - 16439200
Alignment:
Q  23 gatgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    |||||||||||||||||| | |||| |||||||| ||||||||||| |||| |||||||||    
T  16439140 gatgatatagagttgggtaatattggtgacattggtcaatcacaatgtcacaatgcttgtg 16439200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 16971220 - 16971279
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| |||||||||||||    
T  16971220 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 16971279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 13312313 - 13312267
Alignment:
Q  110 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    ||||||| |||| |||||||||||||||||||| |||||||||||||    
T  13312313 acattgtgattgatcaatgtcatcaatgtcacctaactctatgtcac 13312267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 19598340 - 19598394
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    |||||||||||| |||||| |||||||| |||||||||||| ||| |||||||||    
T  19598340 atagagttgggtaacattggtgacattggtcaatcacaataccacaatgcttgtg 19598394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 38134411 - 38134485
Alignment:
Q  59 caatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatc 133  Q
    |||||||||| |||| ||||| |||||||||| ||||||||||| ||||  ||||||| ||||| |||| |||||    
T  38134411 caatcacaatgtcacaatgctagtgaaagagaaagaaacacaagcattgtgacattgtgattggccaatatcatc 38134485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 2356401 - 2356312
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattg 121  Q
    |||||||||| |||||||| ||||||||  |||||||| | |||| |||||| |||||||||||  |||||||| |||  |||||||||||||    
T  2356401 atagagttggatgacattggtgacattggccaatcaca-tgtcacaatgcttatgaaagagaga--aacacaagcattataacattgtaattg 2356312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 39031199 - 39031296
Alignment:
Q  69 atcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatacta 166  Q
    ||||| |||||||||||||| ||||||| |||| ||||   | ||||| |||| ||| ||||| ||||||||||  |||||||||||  |||||||||    
T  39031199 atcacaatgcttgtgaaagaaagagaaatacaaatattatgatattgtgattgatcagtgtcaccaatgtcaccccactctatgtcatccaaatacta 39031296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 39031287 - 39031238
Alignment:
Q  23 gatgatatagagttgggtgacattgatgacattgatcaatcacaatatca 72  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||||||||||    
T  39031287 gatgacatagagtggggtgacattggtgacactgatcaatcacaatatca 39031238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 228486 - 228402
Alignment:
Q  23 gatgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    ||||| ||| |||||||| | |||||||| |||  ||||||||||| |||  |||||||| ||||||||| |||||||| |||||    
T  228486 gatgacataaagttgggtaatattgatgagatttgtcaatcacaatgtcaaaatgcttgtaaaagagagaaaaacacaaatattg 228402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 2953266 - 2953325
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||  ||||||| ||||| |||||||| |||||||||| |||||||||||||    
T  2953266 cacaagcattgtgacattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 2953325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 3899915 - 3899974
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| ||||||| |||||    
T  3899915 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctaagtcac 3899974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 7009452 - 7009401
Alignment:
Q  35 ttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaa 86  Q
    |||| |||||||| ||| |||| |||||||||||||||| ||||||||||||    
T  7009452 ttggatgacattggtgatattggtcaatcacaatatcacaatgcttgtgaaa 7009401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 291092 - 291158
Alignment:
Q  17 atacttga-tgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgt 82  Q
    |||||||| ||| ||||||||||||||||||| ||||||||  ||||||||||  ||| ||||||||    
T  291092 atacttgagtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgt 291158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 12913892 - 12913945
Alignment:
Q  110 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaata 163  Q
    ||||||| ||||  |||| ||| |||||||||| ||||||||||||||||||||    
T  12913892 acattgtgattgaccaatatcaccaatgtcacccaactctatgtcacacaaata 12913945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 17849269 - 17849221
Alignment:
Q  35 ttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    |||||||| |||| |||||||| |||||||||||||| | |||||||||    
T  17849269 ttgggtgatattggtgacattggtcaatcacaatatcgcaatgcttgtg 17849221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 22083045 - 22083001
Alignment:
Q  112 attgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    ||||| ||||||||||||||| ||||||||  |||||||||||||    
T  22083045 attgtgattggtcaatgtcattaatgtcacacaactctatgtcac 22083001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 39777089 - 39777121
Alignment:
Q  165 tacctactattgtttgtctccttaattcttcat 197  Q
    |||||| ||||||||||||||||||||||||||    
T  39777089 tacctaatattgtttgtctccttaattcttcat 39777121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 30734410 - 30734537
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||||| |||||||||||||||||||| | |||||||| |||| |||||||||||||| |||||||||||||||||   ||||||| ||||| |||||    
T  30734410 atagagtttggtgacattgatgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatg 30734509  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||||||||| |||||||||||||    
T  30734510 tcaccaatgtcacctaactctatgtcac 30734537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 33689286 - 33689175
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    ||||||||  |||||||||| |||| |||||||||||||||||||||||||||| ||||  ||||||| ||||  |||| |||||||||||||| |||||    
T  33689286 tgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatatcatcaatgtcacccaactc 33689187  T
Q  149 tatgtcacacaa 160  Q
    ||||||||||||    
T  33689186 tatgtcacacaa 33689175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 47492061 - 47492182
Alignment:
Q  35 ttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatca 134  Q
    ||||||||||||| ||||||||  |||||||||| |||| |||||||||||| ||||||||||||||| ||||  ||||||| ||||| |||| | | ||    
T  47492061 ttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaaaagagagaaacacaagcattgtgacattgtgattggccaatatgacca 47492160  T
Q  135 atgtcaccaaactctatgtcac 156  Q
    |||||||| |||||||||||||    
T  47492161 atgtcacccaactctatgtcac 47492182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 51046075 - 51046208
Alignment:
Q  23 gatgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattgg 122  Q
    ||||| |||||||||| ||| |||| |||||||||||||||| ||| |||| ||| |||||||||||||||||||||||| |||    |||||| |||||    
T  51046075 gatgacatagagttggatgatattggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattatggcattgtgattgg 51046174  T
Q  123 tcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
     |||||||| |||||||| | |||||||||||||    
T  51046175 ccaatgtcaccaatgtcatccaactctatgtcac 51046208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 41753094 - 41752967
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||| ||||||||| ||||||||  ||||||||||  ||| |||||||||||||||| ||||||||||  ||||   |||||| ||||| |||||    
T  41753094 atagagttgagtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagaaagaaacacaaacattgtggcattgtgattggccaatg 41752995  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||||||||| |||||||||||||    
T  41752994 tcaccaatgtcacccaactctatgtcac 41752967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 43139737 - 43139851
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    |||||| | ||||||||||| |||  |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||||||||| |||||    
T  43139737 tgacatcggtcaatcacaatgtcagaatgcttgtgaaagagagagaaacacaagcattgtggcattgttattggccaatgtcaccaatgtcacccaactc 43139836  T
Q  149 tatgtcacacaaata 163  Q
    |||||||| ||||||    
T  43139837 tatgtcacccaaata 43139851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 50524832 - 50524706
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||| ||||||||| ||| |||  ||||||||||| | || |||||||||||||||||||||||||||  ||||  ||||| | |||||||||||    
T  50524832 atagagttgagtgacattggtgatattagtcaatcacaatgttacgatgcttgtgaaagagagagaaacacaaacattgtgacattatgattggtcaatg 50524733  T
Q  129 tcatcaatgtcaccaaactctatgtca 155  Q
    |||||| | ||||  ||||||||||||    
T  50524732 tcatcattatcactcaactctatgtca 50524706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 55223338 - 55223231
Alignment:
Q  53 attgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatg 152  Q
    |||| ||||||| ||| |||| |||||||||||||||||||||||| |||||||  || ||||| ||||  |||| ||| |||||||||| |||||||||    
T  55223338 attggtcaatcataatgtcacaatgcttgtgaaagagagagaaacataagtattctaatattgtgattgaccaatatcaccaatgtcacctaactctatg 55223239  T
Q  153 tcacacaa 160  Q
    ||||||||    
T  55223238 tcacacaa 55223231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 1801454 - 1801556
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||||||||  ||||||||||  ||| |||||||||||||||||||||||||||  ||||   |||||| ||||| |||||    
T  1801454 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatg 1801553  T
Q  129 tca 131  Q
    |||    
T  1801554 tca 1801556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 50550085 - 50549992
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcacc 142  Q
    |||||||||||||||| ||| |||  ||| |||||||||||||||||||||||| |||| || ||||| |||||||||||||| |||| |||||    
T  50550085 tgacattgatcaatcataatgtcataatgtttgtgaaagagagagaaacacaagcattgtaatattgtgattggtcaatgtcaccaatatcacc 50549992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 45103117 - 45103180
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagaga 92  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||||||||    
T  45103117 atagagttgggtgacattggtgatattgatcaatcacaatgtcacaatgcttgtgaaagagaga 45103180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 30734464 - 30734401
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 160  Q
    |||||| ||||  ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  30734464 cacaagcattgtgacattgtgatcggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 30734401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 30476502 - 30476584
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    ||||||||  |||||||||| |||| |||||||||||||||||||||||||||| ||||  ||||||| ||||  ||||||||    
T  30476502 tgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtca 30476584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 155
Target Start/End: Original strand, 30580764 - 30580890
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||| ||||||||||||| ||| ||||| |||||| ||| |||| ||  |||||||||||| ||||||||||| | ||  ||||||| ||||  |||||    
T  30580764 atagaattgggtgacattggtgatattgaccaatcataatgtcacaatatttgtgaaagagatagaaacacaagcactgtgacattgtgattgaccaatg 30580863  T
Q  129 tcatcaatgtcaccaaactctatgtca 155  Q
    |||  ||||||||| || |||||||||    
T  30580864 tcacaaatgtcacccaattctatgtca 30580890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 47677283 - 47677365
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    ||||||||| | |||||||| |||| |||||||||||||||||||||||||||  ||||  ||||||| |||| |||||||||    
T  47677283 tgacattgaccgatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattgatcaatgtca 47677365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 29031746 - 29031814
Alignment:
Q  53 attgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattg 121  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||  ||||  ||||||||||||    
T  29031746 attggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtaattg 29031814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 30904368 - 30904296
Alignment:
Q  35 ttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||  || | ||||||||||||||||||| ||||    
T  30904368 ttgggtgacatcgatgacattaatcaatcacaatatcacaatatttataaaagagagagaaacacaagcattg 30904296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 18321763 - 18321657
Alignment:
Q  47 gatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaac 146  Q
    |||||||||| ||||||||||| |||| |||| ||||||| ||||| ||||||||   |||  ||||||| ||||  |||||||| |||| ||||| |||    
T  18321763 gatgacattggtcaatcacaatgtcacaatgcatgtgaaaaagagaaaaacacaaactttgtgacattgtgattgaccaatgtcaccaatatcacccaac 18321664  T
Q  147 tctatgt 153  Q
    |||||||    
T  18321663 tctatgt 18321657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 33689184 - 33689238
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||||||| |||| ||||||||||| |||| |||||||||    
T  33689184 atagagttgggtgacattgatgatattggtcaatcacaatgtcacaatgcttgtg 33689238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 39385746 - 39385798
Alignment:
Q  79 ttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    |||||||||||||||||| |||| ||||| |||||||| ||||| ||||||||    
T  39385746 ttgtgaaagagagagaaatacaaatattgtaacattgtgattggccaatgtca 39385798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 50549970 - 50550037
Alignment:
Q  17 atacttga-tgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    |||||||| ||||||| || ||||||| |||| ||||||||| |||||||||||| || |||||||||    
T  50549970 atacttgagtgatataaagctgggtgatattggtgacattgaccaatcacaatattacaatgcttgtg 50550037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 1801494 - 1801449
Alignment:
Q  111 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  1801494 cattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 1801449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 18321659 - 18321703
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcac 73  Q
    |||||||||||||| |||| |||||||| ||||||||||| ||||    
T  18321659 atagagttgggtgatattggtgacattggtcaatcacaatgtcac 18321703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 30580892 - 30580832
Alignment:
Q  23 gatgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||| ||||| ||||||||||||  |||||||| ||||||||||| ||||  ||||||||    
T  30580892 gatgacatagaattgggtgacatttgtgacattggtcaatcacaatgtcacagtgcttgtg 30580832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 160
Target Start/End: Complemental strand, 47677291 - 47677263
Alignment:
Q  132 tcaatgtcaccaaactctatgtcacacaa 160  Q
    |||||||||||||||||||||||||||||    
T  47677291 tcaatgtcaccaaactctatgtcacacaa 47677263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 7055 - 7185
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||| |||   |||||||||| |||| |||||||||||||||||||||||||||| ||||  ||||||| ||||| |||||    
T  7055 atagagttgggtgacattggtgatattagccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatg 7154  T
Q  129 tcatcaatgtcaccaaactctatgtcacacaa 160  Q
    ||| |||||||||| |||||||||||||||||    
T  7155 tcaccaatgtcacc-aactctatgtcacacaa 7185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 1e-30; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 16514554 - 16514427
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||||||||||| |||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||| |||    ||| || ||||| |||||    
T  16514554 atagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattatggcatagtgattggccaatg 16514455  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||||||||| |||||||||||||    
T  16514454 tcaccaatgtcacccaactctatgtcac 16514427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 29508698 - 29508826
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaa-tatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaat 127  Q
    ||||||||||||||||||| ||||||||| ||||||||| |  ||| |||||||||||||||||||||||||||| ||||   |||||| ||||| ||||    
T  29508698 atagagttgggtgacattggtgacattgaccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaat 29508797  T
Q  128 gtcatcaatgtcaccaaactctatgtcac 156  Q
    |||| |||| ||||| |||||||||||||    
T  29508798 gtcaccaatatcacccaactctatgtcac 29508826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 14229361 - 14229453
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattg 121  Q
    |||||||| |||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||||||| ||||  ||||||| ||||    
T  14229361 atagagttcggtgacattggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattg 14229453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 38933717 - 38933615
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| |||| |||  |||||| ||| |||| |||||||||||||||||||||||||||| ||||   |||||| |||||||||||    
T  38933717 atagagttgggtgacattggtgacgttggccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatg 38933618  T
Q  129 tca 131  Q
    |||    
T  38933617 tca 38933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 6722081 - 6721970
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||||||| |||||||  ||| ||||  |||||||||| |||| ||| |||||||||||||||||||||||| ||||  | ||||| |||||||||||    
T  6722081 atagagttggttgacattagtgatattggccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatg 6721982  T
Q  129 tcatcaatgtca 140  Q
    ||| ||||||||    
T  6721981 tcaccaatgtca 6721970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 6217232 - 6217334
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| ||||||||  ||||||||||  ||| |||||||||||||||||||||||||||  ||||   |||||| ||||| |||||    
T  6217232 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatg 6217331  T
Q  129 tca 131  Q
    |||    
T  6217332 tca 6217334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 14470600 - 14470693
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattgg 122  Q
    ||||||||||||||||||| ||||||||| |||||||||| |  | |||||||||||||||||||||||||||  ||||  ||||||| |||||    
T  14470600 atagagttgggtgacattggtgacattgaccaatcacaatgttgcaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattgg 14470693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 8534259 - 8534164
Alignment:
Q  46 tgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcac 141  Q
    |||||| |||| ||||| ||||| |||| || ||||||||| |||||||||||||| ||||   |||||||||||| |||||||||||||||||||    
T  8534259 tgatgatattggtcaattacaatgtcacaattcttgtgaaatagagagaaacacaaatatttttacattgtaattgatcaatgtcatcaatgtcac 8534164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 24116050 - 24115919
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||| ||||  ||| |||| ||||||||||| || | ||||||||||||||| | |||||||| | |||| |||||||| ||||| |||||    
T  24116050 atagagttgggtgccattagtgatattggtcaatcacaatgtcgcaatgcttgtgaaagagtgtgaaacacaggcattgtaacattgtgattggccaatg 24115951  T
Q  129 tcatcaatgtcaccaaactctatgtcacacaa 160  Q
    | | |||||| ||  |||||||| ||||||||    
T  24115950 ttaccaatgtgactcaactctatctcacacaa 24115919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 14470654 - 14470591
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 160  Q
    |||||| |||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  14470654 cacaagcattgcaacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacacaa 14470591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 15011390 - 15011297
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcacc 142  Q
    ||||||||  |||||||||| |||| |||||||||||||||||||||||||||  ||||   |||||| ||||| |||| ||| ||||||||||    
T  15011390 tgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatatcaccaatgtcacc 15011297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 2894075 - 2893991
Alignment:
Q  47 gatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    |||||||||| ||||||||| | |||| |||||||||||||||||||||| ||||| ||||  | ||||| ||||| ||||||||    
T  2894075 gatgacattggtcaatcacagtgtcacaatgcttgtgaaagagagagaaatacaagcattgtgagattgtgattggccaatgtca 2893991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 14892390 - 14892318
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaa 101  Q
    |||||||||| |||||||| |||||||||||||||||||| | || || ||| ||||||||||||||| ||||    
T  14892390 atagagttggatgacattggtgacattgatcaatcacaatgttacaatacttatgaaagagagagaaagacaa 14892318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 37961836 - 37961764
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaa 101  Q
    ||||||||| |||| |||  ||||||||| ||||||||||  ||| |||||||||||||||||||||||||||    
T  37961836 atagagttgagtgatatttgtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 37961764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 45213892 - 45213939
Alignment:
Q  113 ttgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 160  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  45213892 ttgtgattggtcaatgtcatcaatgtcacccaactctatgtcacacaa 45213939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 2828694 - 2828612
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    ||||||||  |||||||||| |||| |||||| ||||||||||||||||||||| |||   ||||||| ||||| ||||||||    
T  2828694 tgacattggccaatcacaatgtcacaatgcttctgaaagagagagaaacacaagcattttgacattgtgattggccaatgtca 2828612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 14892339 - 14892407
Alignment:
Q  100 aagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatactacc 168  Q
    |||||||| |||||||| |||| ||||||||| |||||||| | ||||||||||||| ||||| |||||    
T  14892339 aagtattgtaacattgtgattgatcaatgtcaccaatgtcatccaactctatgtcacccaaatgctacc 14892407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 29925580 - 29925680
Alignment:
Q  31 agagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtc 130  Q
    |||||||||||| |||| ||||||||  |  ||||||| |||  |||||||||||||||||||||||||||  ||||   |||||| ||||| |||||||    
T  29925580 agagttgggtgatattggtgacattggcccctcacaatgtcagaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtc 29925679  T
Q  131 a 131  Q
    |    
T  29925680 a 29925680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 33018680 - 33018620
Alignment:
Q  24 atgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtga 84  Q
    |||| ||||||||||||||||||| ||| |||| ||||||||||| |||| ||||||||||    
T  33018680 atgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtga 33018620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 37762029 - 37762128
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    ||||||||| |||||||||| || | |||||||||||||||| ||||||||||| ||||  | ||||| ||||  | |||||| |||| |||| ||||||    
T  37762029 tgacattgaccaatcacaatgtcgcaatgcttgtgaaagagaaagaaacacaagcattgtgatattgtgattgacccatgtcaccaatatcactaaactc 37762128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 45213930 - 45213892
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaa 67  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  45213930 atagagttgggtgacattgatgacattgaccaatcacaa 45213892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 6721965 - 6722013
Alignment:
Q  35 ttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    |||| |||||||| ||||||||| ||||||||||||||| |||||||||    
T  6721965 ttggatgacattggtgacattgaccaatcacaatatcacaatgcttgtg 6722013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 16514500 - 16514559
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||  ||||||| |||||||||||||| |||| ||||| |||||||||||||    
T  16514500 cacaagcattgtgacattgtgattggtcaatgtcaccaatctcacccaactctatgtcac 16514559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 29508736 - 29508693
Alignment:
Q  113 ttgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||| |||||||||||||| |||||||||| |||||||||||||    
T  29508736 ttgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 29508693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 6217272 - 6217227
Alignment:
Q  111 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  6217272 cattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 6217227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 9173035 - 9173116
Alignment:
Q  75 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| | ||||| ||||||| ||||| ||||   |||||| ||||| |||| ||| |||||||||| |||||||||||||    
T  9173035 atgcttataaaagaaagagaaatacaagcattgtggcattgtgattggccaatatcaccaatgtcacccaactctatgtcac 9173116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 49711 - 49813
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||||| ||||   |||||| ||||| |||||    
T  49711 atagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtgaaagaaagagaaacacaagcattgtggcattgtgattggccaatg 49810  T
Q  129 tca 131  Q
    |||    
T  49811 tca 49813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 49765 - 49706
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    |||||| ||||  ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  49765 cacaagcattgtgacattgtgattggtcaatgtcatcaatgtcacccaactctatgtcac 49706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 1e-27; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 24618609 - 24618711
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||| |||||||||||||||||||| |||  |||||| ||||||||||||||||||||| ||||  ||||||| ||||||||| |    
T  24618609 atagagttgggtgacattggtgacattgatcaatcacaatgtcataatgcttatgaaagagagagaaacacaagcattgtgacattgtgattggtcaacg 24618708  T
Q  129 tca 131  Q
    |||    
T  24618709 tca 24618711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 17751032 - 17750902
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    |||||||||||||| |||||||||||||  | |||||||| |||| |||||||||||||||||| ||| ||||  ||||  ||||||| ||||  |||||    
T  17751032 atagagttgggtgatattgatgacattggccgatcacaatgtcacaatgcttgtgaaagagagataaatacaaacattgtgacattgtgattgaccaatg 17750933  T
Q  129 tcatcaatgtcaccaaactctatgtcacacaa 160  Q
    ||| |||||||| | |||||||||||||||||    
T  17750932 tcaccaatgtcatc-aactctatgtcacacaa 17750902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 12343230 - 12343152
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    |||||||||||||| |||| ||||||||  |||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  12343230 atagagttgggtgagattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 12343152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 551193 - 551307
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactc 148  Q
    |||||||| |||||||||||  ||| ||| |||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||| ||| | || ||    
T  551193 tgacattggtcaatcacaatgccacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatatcatccaattc 551292  T
Q  149 tatgtcacacaaata 163  Q
    |||||||| ||||||    
T  551293 tatgtcacccaaata 551307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 13043587 - 13043509
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    ||||||||| |||| |||| ||||||||   |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  13043587 atagagttgagtgatattggtgacattggctaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattg 13043509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 24587558 - 24587464
Alignment:
Q  62 tcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    ||||||| |||| |||||||||||| || |||||||||||| ||||  ||||||| ||||  ||||||||  ||||||||| |||||||||||||    
T  24587558 tcacaatgtcacaatgcttgtgaaaaagcgagaaacacaagcattgtgacattgtgattgaccaatgtcactaatgtcacccaactctatgtcac 24587464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 10521877 - 10521959
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    ||||||||  |||||||||| |||| |||||| ||||||||||||||||||||| |||   ||||||| ||||  ||||||||    
T  10521877 tgacattggccaatcacaatgtcacaatgcttatgaaagagagagaaacacaagcattatgacattgtgattgaccaatgtca 10521959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 24587469 - 24587523
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtg 83  Q
    ||||||||||||||||||  |||||||| ||||||||||| |||| |||||||||    
T  24587469 atagagttgggtgacattagtgacattggtcaatcacaatgtcacaatgcttgtg 24587523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 2315332 - 2315381
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaaca 98  Q
    |||||||||||||||||||| |||| ||| ||||||||||||| ||||||    
T  2315332 tgacattgatcaatcacaatgtcacaatgtttgtgaaagagagcgaaaca 2315381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 31654390 - 31654333
Alignment:
Q  74 catgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    |||| |||||||||||||||||||||||| ||||  ||||||| ||||| ||||||||    
T  31654390 catgtttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtca 31654333  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 17750978 - 17751041
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 160  Q
    |||||| ||||  ||||||| || || ||||||||||||| ||||| |||||||||||||||||    
T  17750978 cacaagcattgtgacattgtgatcggccaatgtcatcaatatcacccaactctatgtcacacaa 17751041  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 24975760 - 24975815
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtga 84  Q
    |||||||||| |||||||| |||||||| |||||||||||  ||| ||||||||||    
T  24975760 atagagttggctgacattggtgacattggtcaatcacaatgccacaatgcttgtga 24975815  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 24618650 - 24618604
Alignment:
Q  110 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 156  Q
    ||||||| |||| ||||||||| |||||||||| |||||||||||||    
T  24618650 acattgtgattgatcaatgtcaccaatgtcacccaactctatgtcac 24618604  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 7384492 - 7384552
Alignment:
Q  25 tgatatagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaa 85  Q
    |||||||||||||| |||||||  ||||||||| |||||||||| |||  ||| |||||||    
T  7384492 tgatatagagttggatgacattagtgacattgaccaatcacaatgtcataatgtttgtgaa 7384552  T

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Target: scaffold0180 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 19130 - 19202
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaa 101  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| ||||||||| |||| ||||||||||||    
T  19130 atagagttgggtgacattgatgatattgatcaatcacaatgtcacaatgcttgtggaagaaagagaaacacaa 19202  T

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Target: scaffold0180; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 19184 - 19119
Alignment:
Q  97 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaat 162  Q
    |||||| ||||  ||||||| |||| ||||| |||||||||||||| |||||||||||||||||||    
T  19184 cacaagcattgtgacattgtgattgatcaatatcatcaatgtcacccaactctatgtcacacaaat 19119  T

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Target: scaffold0161 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 27228 - 27355
Alignment:
Q  29 atagagttgggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatg 128  Q
    ||||||||||||||||||  ||| ||||  |||||||||| |||  || ||||||||||||||||||||| ||| ||||   |||||| ||||| ||||     
T  27228 atagagttgggtgacattagtgatattggccaatcacaatgtcataattcttgtgaaagagagagaaacagaagcattgtggcattgtgattggccaata 27327  T
Q  129 tcatcaatgtcaccaaactctatgtcac 156  Q
    ||| |||||||||| |||||||| ||||    
T  27328 tcaccaatgtcacccaactctatatcac 27355  T

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Target: scaffold1033 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 2322 - 2265
Alignment:
Q  50 gacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  2322 gacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 2265  T

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Target: scaffold1029 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 2322 - 2265
Alignment:
Q  50 gacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattg 107  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  2322 gacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 2265  T

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Target: scaffold0536 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 4909 - 5010
Alignment:
Q  38 ggtgacattgatgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatg 137  Q
    |||||||||| |||||| || |||||||||||| || |||||||||||||||||| ||||| |||   || |||||||||||||  |||| ||| ||||     
T  4909 ggtgacattggtgacatcgaccaatcacaatattacaatgcttgtgaaagagagacaaacataag---tgtaacattgtaattgaccaatatcaccaata 5005  T
Q  138 tcacc 142  Q
    |||||    
T  5006 tcacc 5010  T

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Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 63867 - 63785
Alignment:
Q  49 tgacattgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 131  Q
    ||||||||  |||||||||| |||| |||||||||||||||||||||||||||  ||||   |||||| ||||| ||||||||    
T  63867 tgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtca 63785  T

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Target: scaffold0481 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 2919 - 2967
Alignment:
Q  53 attgatcaatcacaatatcaccatgcttgtgaaagagagagaaacacaa 101  Q
    ||||| |||||||||| |||| ||| |||||||||||||||||||||||    
T  2919 attgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaa 2967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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