View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1048_high_3 (Length: 767)

Name: NF1048_high_3
Description: NF1048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1048_high_3
NF1048_high_3
[»] chr2 (32 HSPs)
chr2 (369-545)||(9230968-9231145)
chr2 (30-336)||(9231139-9231458)
chr2 (636-754)||(9230760-9230878)
chr2 (128-243)||(28254285-28254400)
chr2 (72-243)||(42514644-42514818)
chr2 (128-243)||(28531362-28531477)
chr2 (129-243)||(40679678-40679792)
chr2 (60-243)||(962593-962778)
chr2 (128-238)||(36178653-36178763)
chr2 (160-245)||(40733510-40733595)
chr2 (160-236)||(6712978-6713054)
chr2 (135-243)||(16542444-16542552)
chr2 (60-238)||(37105924-37106105)
chr2 (168-243)||(38796306-38796381)
chr2 (149-243)||(15880258-15880352)
chr2 (128-238)||(37106188-37106298)
chr2 (149-222)||(6422126-6422199)
chr2 (128-241)||(7598225-7598338)
chr2 (149-238)||(14745736-14745825)
chr2 (149-243)||(31468819-31468909)
chr2 (150-243)||(31899496-31899589)
chr2 (128-243)||(15511543-15511656)
chr2 (148-222)||(28254180-28254254)
chr2 (189-243)||(35580832-35580886)
chr2 (149-243)||(36005949-36006042)
chr2 (189-243)||(36785672-36785726)
chr2 (157-243)||(37632674-37632760)
chr2 (189-243)||(37895170-37895224)
chr2 (160-226)||(40163453-40163519)
chr2 (128-241)||(1769889-1770002)
chr2 (59-116)||(5542601-5542658)
chr2 (149-238)||(41283544-41283633)
[»] chr4 (34 HSPs)
chr4 (130-243)||(3244499-3244612)
chr4 (128-243)||(25483331-25483446)
chr4 (165-243)||(54741261-54741339)
chr4 (142-238)||(41370357-41370453)
chr4 (128-243)||(1731693-1731808)
chr4 (128-243)||(36629232-36629347)
chr4 (149-243)||(2740695-2740789)
chr4 (149-243)||(22183331-22183425)
chr4 (149-243)||(52884882-52884976)
chr4 (149-241)||(54017662-54017754)
chr4 (165-240)||(2741069-2741144)
chr4 (170-237)||(16889624-16889691)
chr4 (128-243)||(22028007-22028122)
chr4 (128-243)||(34646695-34646810)
chr4 (83-240)||(49302902-49303064)
chr4 (149-243)||(4955384-4955478)
chr4 (149-243)||(10246342-10246436)
chr4 (149-215)||(18932816-18932882)
chr4 (189-243)||(39792967-39793021)
chr4 (128-226)||(50630801-50630899)
chr4 (128-238)||(55933170-55933280)
chr4 (188-237)||(16888922-16888971)
chr4 (80-116)||(43827564-43827600)
chr4 (78-243)||(50002421-50002589)
chr4 (143-226)||(20826229-20826312)
chr4 (189-243)||(3700360-3700414)
chr4 (149-243)||(36572014-36572108)
chr4 (62-116)||(44620784-44620838)
chr4 (189-243)||(45489438-45489492)
chr4 (189-243)||(52884690-52884744)
chr4 (149-223)||(54108928-54109002)
chr4 (169-226)||(6975543-6975600)
chr4 (72-113)||(39404146-39404187)
chr4 (54-111)||(51768029-51768086)
[»] chr7 (29 HSPs)
chr7 (149-243)||(16569191-16569285)
chr7 (149-243)||(16596377-16596471)
chr7 (150-243)||(28301613-28301706)
chr7 (128-243)||(7517575-7517690)
chr7 (149-236)||(47129097-47129184)
chr7 (149-243)||(1085685-1085779)
chr7 (143-243)||(24177430-24177530)
chr7 (157-245)||(40230368-40230456)
chr7 (128-243)||(7554020-7554135)
chr7 (128-243)||(8128489-8128604)
chr7 (128-226)||(6054572-6054670)
chr7 (149-243)||(40094843-40094937)
chr7 (143-243)||(41910657-41910757)
chr7 (128-243)||(30244265-30244380)
chr7 (128-243)||(34218082-34218197)
chr7 (68-119)||(37393180-37393231)
chr7 (149-243)||(22566731-22566825)
chr7 (149-245)||(36622953-36623049)
chr7 (128-243)||(23425-23540)
chr7 (73-116)||(30032692-30032735)
chr7 (168-243)||(30244696-30244771)
chr7 (196-243)||(36967345-36967392)
chr7 (128-243)||(45754711-45754825)
chr7 (189-243)||(118410-118464)
chr7 (199-241)||(10341829-10341871)
chr7 (189-243)||(36109026-36109080)
chr7 (165-243)||(45434631-45434709)
chr7 (149-238)||(37533079-37533168)
chr7 (80-113)||(41910583-41910616)
[»] scaffold0078 (2 HSPs)
scaffold0078 (128-243)||(5352-5467)
scaffold0078 (150-243)||(4977-5070)
[»] chr6 (23 HSPs)
chr6 (128-243)||(2579920-2580035)
chr6 (149-243)||(10074060-10074154)
chr6 (130-238)||(26544049-26544157)
chr6 (128-243)||(10074411-10074526)
chr6 (128-238)||(35210204-35210314)
chr6 (60-113)||(2843683-2843736)
chr6 (60-116)||(16455032-16455088)
chr6 (128-243)||(2578883-2578997)
chr6 (128-243)||(16107673-16107788)
chr6 (128-238)||(2378126-2378236)
chr6 (128-238)||(14748386-14748496)
chr6 (149-243)||(16108058-16108152)
chr6 (128-238)||(29518503-29518613)
chr6 (128-238)||(29518920-29519030)
chr6 (128-238)||(32741179-32741289)
chr6 (128-236)||(2377756-2377864)
chr6 (60-243)||(2578420-2578605)
chr6 (72-116)||(16454700-16454744)
chr6 (80-238)||(1846748-1846909)
chr6 (151-238)||(3409660-3409747)
chr6 (128-238)||(3409259-3409369)
chr6 (129-243)||(16454570-16454684)
chr6 (192-226)||(17135181-17135215)
[»] chr5 (27 HSPs)
chr5 (128-243)||(41632777-41632892)
chr5 (128-226)||(9498702-9498800)
chr5 (149-243)||(26075231-26075325)
chr5 (128-243)||(26074194-26074309)
chr5 (168-243)||(39309679-39309754)
chr5 (189-243)||(36568676-36568730)
chr5 (128-226)||(41170646-41170744)
chr5 (199-243)||(31509618-31509662)
chr5 (160-243)||(1028597-1028680)
chr5 (128-243)||(15370094-15370209)
chr5 (151-242)||(40296386-40296477)
chr5 (169-236)||(42524719-42524785)
chr5 (149-243)||(6224191-6224285)
chr5 (149-243)||(42508607-42508701)
chr5 (61-113)||(3295323-3295375)
chr5 (143-235)||(41635254-41635346)
chr5 (128-243)||(12662700-12662815)
chr5 (160-243)||(13415840-13415923)
chr5 (149-236)||(18603189-18603276)
chr5 (128-243)||(26074607-26074722)
chr5 (128-227)||(33747782-33747881)
chr5 (128-235)||(35914852-35914959)
chr5 (73-116)||(42405588-42405631)
chr5 (149-243)||(299484-299578)
chr5 (189-238)||(623818-623867)
chr5 (60-113)||(27502013-27502066)
chr5 (149-226)||(34753094-34753171)
[»] chr1 (30 HSPs)
chr1 (165-243)||(22077580-22077658)
chr1 (149-243)||(41184494-41184588)
chr1 (157-243)||(21378118-21378204)
chr1 (149-238)||(44290527-44290616)
chr1 (128-243)||(17294572-17294687)
chr1 (172-243)||(24600406-24600477)
chr1 (128-243)||(34364920-34365035)
chr1 (128-243)||(41157370-41157485)
chr1 (149-243)||(34364502-34364596)
chr1 (152-245)||(22077900-22077993)
chr1 (149-238)||(44290894-44290983)
chr1 (149-240)||(41142370-41142461)
chr1 (149-243)||(5320034-5320128)
chr1 (169-226)||(5528843-5528900)
chr1 (71-116)||(11977405-11977450)
chr1 (71-119)||(5528742-5528790)
chr1 (128-243)||(37556106-37556221)
chr1 (159-238)||(3537226-3537305)
chr1 (73-116)||(44290814-44290857)
chr1 (196-243)||(44685451-44685498)
chr1 (188-243)||(45839622-45839676)
chr1 (160-235)||(50052103-50052178)
chr1 (189-243)||(66581-66635)
chr1 (149-243)||(3875400-3875494)
chr1 (201-243)||(22077243-22077285)
chr1 (149-243)||(24132054-24132148)
chr1 (189-243)||(39066309-39066363)
chr1 (199-244)||(1187483-1187528)
chr1 (73-114)||(44290448-44290489)
chr1 (165-242)||(45084378-45084455)
[»] chr8 (29 HSPs)
chr8 (128-243)||(30359266-30359381)
chr8 (158-245)||(40518575-40518662)
chr8 (149-243)||(9608740-9608834)
chr8 (142-243)||(41972153-41972254)
chr8 (128-243)||(33113415-33113530)
chr8 (128-235)||(43274827-43274934)
chr8 (129-235)||(147454-147560)
chr8 (149-243)||(5420646-5420740)
chr8 (149-243)||(9309350-9309444)
chr8 (149-226)||(70343-70420)
chr8 (160-243)||(8794106-8794189)
chr8 (128-243)||(30359604-30359719)
chr8 (76-226)||(43398062-43398217)
chr8 (189-244)||(45122166-45122221)
chr8 (189-243)||(147824-147878)
chr8 (149-243)||(3038359-3038453)
chr8 (149-215)||(9609108-9609174)
chr8 (60-116)||(5915992-5916047)
chr8 (83-119)||(6732017-6732053)
chr8 (143-243)||(9620739-9620839)
chr8 (157-244)||(1513992-1514079)
chr8 (165-243)||(6876947-6877026)
chr8 (152-243)||(9308972-9309065)
chr8 (205-243)||(18645712-18645750)
chr8 (128-226)||(34835221-34835319)
chr8 (73-118)||(9309104-9309149)
chr8 (73-118)||(9309477-9309522)
chr8 (128-225)||(20870621-20870718)
chr8 (83-116)||(37544490-37544523)
[»] scaffold0734 (1 HSPs)
scaffold0734 (149-243)||(5772-5866)
[»] chr3 (36 HSPs)
chr3 (60-113)||(15773322-15773375)
chr3 (128-243)||(12114610-12114725)
chr3 (128-243)||(39914247-39914362)
chr3 (148-243)||(49336755-49336850)
chr3 (165-238)||(37726504-37726577)
chr3 (128-243)||(32462948-32463064)
chr3 (128-243)||(9240144-9240259)
chr3 (149-240)||(21832412-21832503)
chr3 (128-243)||(37991025-37991140)
chr3 (129-216)||(41359814-41359901)
chr3 (157-242)||(1634391-1634477)
chr3 (165-243)||(8327899-8327977)
chr3 (128-238)||(22304569-22304679)
chr3 (165-243)||(25739510-25739588)
chr3 (189-243)||(33175773-33175827)
chr3 (149-243)||(35946517-35946611)
chr3 (157-242)||(7767391-7767476)
chr3 (128-241)||(15772851-15772964)
chr3 (142-243)||(15773187-15773288)
chr3 (67-116)||(25755519-25755568)
chr3 (202-247)||(39336351-39336396)
chr3 (199-243)||(12747871-12747915)
chr3 (73-112)||(37726625-37726664)
chr3 (128-243)||(37990687-37990802)
chr3 (128-243)||(54017864-54017979)
chr3 (128-238)||(4823655-4823765)
chr3 (169-243)||(25755389-25755463)
chr3 (157-243)||(29644658-29644744)
chr3 (157-243)||(29644979-29645065)
chr3 (157-243)||(33803329-33803415)
chr3 (74-116)||(42342081-42342123)
chr3 (149-243)||(42342159-42342253)
chr3 (149-243)||(52634671-52634764)
chr3 (189-243)||(53577359-53577413)
chr3 (60-113)||(9239941-9239994)
chr3 (165-238)||(51886561-51886634)
[»] scaffold0171 (1 HSPs)
scaffold0171 (149-243)||(17525-17619)
[»] scaffold0702 (1 HSPs)
scaffold0702 (128-236)||(562-670)
[»] scaffold0027 (2 HSPs)
scaffold0027 (128-242)||(47356-47470)
scaffold0027 (82-115)||(47486-47519)


Alignment Details
Target: chr2 (Bit Score: 158; Significance: 1e-83; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 369 - 545
Target Start/End: Complemental strand, 9231145 - 9230968
Alignment:
Q  369 aagtgaagttgttaaccaaatttaaggtttgtaagtagcttctagctagtaa-taagcaaaatatgaaatggacattgaagagattggacaagtggccaa 467  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  9231145 aagtgtagttgttaaccaaatttaaggtttggaagtagcttctagctagtaaataagcaaaatatgaaatggacattgaagagattggacaagtggccat 9231046  T
Q  468 atagaaaggaaacaaatgaaatgaactaggccggtgcttaatgagggaccctttcatcaattaacatcattacagtcc 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9231045 atagaaaggaaacaaatgaaatgaactaggccggtgcttaatgagggaccctttcatcaattaacatcattacagtcc 9230968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 9231458 - 9231139
Alignment:
Q  30 attatagcaatgttttctagtactagtagatgttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaaccgcataatatattca-- 127  Q
    ||||||||||||||||||||| | |||||||| ||| |||| |||| || |||||| |||||||||||| ||||||||| ||||||||||  ||   |      
T  9231458 attatagcaatgttttctagtgccagtagatgctgggtcatgaggg-agctcgggg-atcgtccacatcaaggttagaataaccgcataagttagagaga 9231361  T
Q  128 -accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
     || ||| |||||| ||||| ||||||||| ||||||||||| |||||||||||||||||  |||||| |||||||||||||| ||| ||||||||||||    
T  9231360 tactacactcttaaccaaaactttaaggcggtgggttgatggatcctcttatttataatatgttcaacctttacttttctatctgatatgagacatataa 9231261  T
Q  227 gtcatacttgcacacaata------------gtagatattgaatgtaattacattgcatgatttagtggttataccagccttgcgtatacgtacctgaat 314  Q
     |||||||| ||||||| |            |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  9231260 ctcatacttacacacaacattacacacaacagtagatattgaatgtaattacattgcatgaattagtggttataccaaccttgcgtatacgtacctgaat 9231161  T
Q  315 gaggtaaaagatagaaagtgta 336  Q
     |||||||||||||||||||||    
T  9231160 caggtaaaagatagaaagtgta 9231139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 636 - 754
Target Start/End: Complemental strand, 9230878 - 9230760
Alignment:
Q  636 tagtctacacatagcattgggaacccttccttttgcaaaagatgaaaaaatccacgtggtcccacatggctatgctttccacgtcgtacactcgtgacat 735  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9230878 tagtctatacatagcattgggaacccttccttttgcaaaagatgaaaaaatccacgtggtcccacatggctatgctttccacgtcgtacactcgtgacat 9230779  T
Q  736 aggccctgttccagcccct 754  Q
    |||||||||||||||||||    
T  9230778 aggccctgttccagcccct 9230760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 28254285 - 28254400
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||| ||| ||||||||||||| |||||| |  |||||| ||||||||||||||||||||| ||||||||||    
T  28254285 accacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgggacatataag 28254384  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||| ||||||||    
T  28254385 tcacactggcacacaa 28254400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 42514818 - 42514644
Alignment:
Q  72 aggggagttcgggggatcgtccacatcgaggttagaacaaccgca----taatatattcaaccacattcttaatcaaaattttaaggcgatgggttgatg 167  Q
    ||||||| |||||||| |||||||||||||| |||||||||| ||    ||| | |  |  ||||| |||||  |||||| ||||||||||||||| |||    
T  42514818 aggggagctcgggggaccgtccacatcgaggctagaacaaccccacaagtaagagagac-gccacactcttacccaaaatcttaaggcgatgggtttatg 42514720  T
Q  168 ggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||||||| ||||||    |||||| |||||||||||||| |||||  ||||||||| ||| ||||||| ||||    
T  42514719 ggtcctcttacttataaggtgttcaacctttacttttctatctgatgtaggacatataactcacacttgcatacaa 42514644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 28531362 - 28531477
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||| ||||||| ||| ||| ||||| ||||||| ||||||    |||||| ||| ||||||||||||||||| |||||||||     
T  28531362 accacactcttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataac 28531461  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  28531462 tcacacttgcacacaa 28531477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 40679678 - 40679792
Alignment:
Q  129 ccacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagt 228  Q
    ||||| |||||  |||||| ||||||||||||||| |||||| |||||| ||||||    ||||||  ||||||||||||||||| || ||||||||| |    
T  40679678 ccacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacccttacttttctatccgatatgggacatataact 40679777  T
Q  229 catacttgcacacaa 243  Q
    || | ||||||||||    
T  40679778 cacatttgcacacaa 40679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 962778 - 962593
Alignment:
Q  60 tgttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaaccgcataat--atattca-accacattcttaatcaaaattttaaggcg 156  Q
    |||||||||||  |||||||||||| || |||||||||||||| |||||||||| || ||   | | | | | |||| |||||  |||||  ||||| |     
T  962778 tgttggatcatg-ggggagttcgggagaccgtccacatcgaggctagaacaaccacacaagcaagagtgacaacacactcttacccaaaaccttaagaca 962680  T
Q  157 atgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||||||| | ||||||    |||||| ||||||||||||||||||||| ||||||||| ||| ||||||| ||||    
T  962679 atgggtttatgggtcctctcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcatacaa 962593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 36178653 - 36178763
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| |||||||||     
T  36178653 accacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataac 36178752  T
Q  228 tcatacttgca 238  Q
    ||| |||||||    
T  36178753 tcacacttgca 36178763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 40733595 - 40733510
Alignment:
Q  160 ggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaata 245  Q
    |||| ||||||||||||| ||||||    |||||||||||||||| |||| |||||| ||||||||| ||| ||||| ||||||||    
T  40733595 ggtttatgggtcctcttacttataaggtgttcaacatttacttttttatctgatgtgggacatataactcacacttgtacacaata 40733510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 6713054 - 6712978
Alignment:
Q  160 ggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttg 236  Q
    |||| ||||||||||||| ||||||    ||||||||||||| || ||||||||||||||||||||| ||| |||||    
T  6713054 ggtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgagacatataactcacacttg 6712978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 16542552 - 16542444
Alignment:
Q  135 tcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatact 234  Q
    ||||| ||||||| ||||||| ||| ||| ||  ||||||||||||||||    |||||| |||||| || ||||||||||| ||| ||||| ||| |||    
T  16542552 tcttactcaaaatcttaaggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacttataactcacact 16542453  T
Q  235 tgcacacaa 243  Q
    |||||||||    
T  16542452 tgcacacaa 16542444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 238
Target Start/End: Complemental strand, 37106105 - 37105924
Alignment:
Q  60 tgttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaaccgcataatatattca---accacattcttaatcaaaattttaaggcg 156  Q
    |||||| ||| |||||||| |||||||| |||||||||||||| ||||||||||| | ||   |   |   |||||| |||||  |||||| |||||||     
T  37106105 tgttgggtcacaaggggagctcgggggaccgtccacatcgaggctagaacaaccgtacaagcaagagagacaccacactcttacccaaaatcttaaggca 37106006  T
Q  157 atgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    ||| ||| |||||||| |||| ||||||    |||||| |||||| || ||| ||||||| ||||||||| ||| |||||||    
T  37106005 atgagtttatgggtccccttacttataaggtgttcaacctttactattttattcgatgtgggacatataactcacacttgca 37105924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 38796306 - 38796381
Alignment:
Q  168 ggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||||||| ||||||    ||||||||||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  38796306 ggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaa 38796381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 15880352 - 15880258
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || |||||||||||  |||||||| ||| ||||| ||||||    
T  15880352 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacacttgtacacaa 15880258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 37106298 - 37106188
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||  ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| |||||||||     
T  37106298 accacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataac 37106199  T
Q  228 tcatacttgca 238  Q
    ||| |||||||    
T  37106198 tcacacttgca 37106188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 6422199 - 6422126
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacat 222  Q
    ||||||| ||||||| ||||||||||||| |||||||   |||||| ||||||||| |||| |||||| |||||    
T  6422199 ttaaggctatgggtttatgggtcctcttaattataatgtgttcaacctttacttttttatctgatgtgggacat 6422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 7598338 - 7598225
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||| |||||||  |||||  ||||||| ||| ||| ||||||||||||||||||||    || ||| ||||||||||||| ||||||   ||||||||     
T  7598338 accatattcttacccaaaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaacctttacttttctattcgatgtagaacatataat 7598239  T
Q  228 tcatacttgcacac 241  Q
    ||| ||||||||||    
T  7598238 tcacacttgcacac 7598225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 14745736 - 14745825
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||| ||||| ||||||||| ||| |||||||    
T  14745736 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacacttgca 14745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 31468819 - 31468909
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||| ||| ||||||||||||||    || | ||||||| |||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  31468819 ttaaggcaatgagtttatgggtcctcttat----aagatattcaacctttactattttatccgatgtgggacatataactcacacttgcacacaa 31468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 31899496 - 31899589
Alignment:
Q  150 taaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| ||| ||| ||||||||||||| ||||||    ||||||||||||| || |||||||||||  |||||||| ||| |||| |||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaa 31899589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 15511543 - 15511656
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||| ||||| | ||||||| ||||||||||||| ||||||    |||||| |||||| || |||||| |||| |||||||||     
T  15511543 accacactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacctttactcttttatccgttgtgtgacatataac 15511642  T
Q  228 tcatacttgcacacaa 243  Q
    ||  ||||||||||||    
T  15511643 tc--acttgcacacaa 15511656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 28254180 - 28254254
Alignment:
Q  148 tttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacat 222  Q
    |||||||| | | ||| ||| ||||||||| ||||||    |||||| |||||||||||||||||||||||||||    
T  28254180 tttaaggcaaagtgtttatgagtcctcttacttataaagtgttcaacctttacttttctatccgatgtgagacat 28254254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 35580832 - 35580886
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||||||| | || ||||||||||| ||||||||| ||| ||||||||||||    
T  35580832 ttcaacatttattgttttatccgatgtgggacatataactcacacttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 36005949 - 36006042
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||| ||| ||||||||||||| ||||||    |||||| ||||| ||||||| ||||||| ||||||||| ||| ||||| ||||||    
T  36005949 ttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacttttac-tttctattcgatgtgggacatataactcacacttgtacacaa 36006042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 36785672 - 36785726
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| |||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  36785672 ttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaa 36785726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 37632674 - 37632760
Alignment:
Q  157 atgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||||||||| |||||| |  |  ||| |||||| || ||||||||||  ||||||||| ||| ||||||||||||    
T  37632674 atgggtttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactcacacttgcacacaa 37632760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 37895170 - 37895224
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| |||| |||||||||||||||| ||||||||| ||| ||| ||||||||    
T  37895170 ttcaacttttatttttctatccgatgtgggacatataactcaaactcgcacacaa 37895224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 40163453 - 40163519
Alignment:
Q  160 ggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
    |||| ||||||| ||||| ||||||    |||||| ||||||||||||||||||||| |||||||||    
T  40163453 ggttaatgggtcatcttacttataaggtgttcaacctttacttttctatccgatgtgggacatataa 40163519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 1770002 - 1769889
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| ||||| |||||  || || || ||| ||| ||| ||||||||| ||||||    |||||| |||||| || ||||||||||| |||||||||     
T  1770002 accacactcttattcaaagcttcaaagctatgagtttatgagtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataac 1769903  T
Q  228 tcatacttgcacac 241  Q
    ||| ||||||||||    
T  1769902 tcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 5542601 - 5542658
Alignment:
Q  59 atgttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaaccgca 116  Q
    ||||||||||||  |||||| |||||||| |||||||||||||  | |||||||||||    
T  5542601 atgttggatcatggggggagctcgggggaccgtccacatcgagacttgaacaaccgca 5542658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 41283544 - 41283633
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    ||||||| ||| ||| ||||||||||||| ||||||    |||||| |||||| || |||||||| || ||||||||| ||| |||||||    
T  41283544 ttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatatgggacatataactcacacttgca 41283633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 5e-24; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 3244499 - 3244612
Alignment:
Q  130 cacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtc 229  Q
    ||||||||||  ||||| |||||| | ||| ||| ||||||||||||| |||||| |  |||||| ||||||||||||||||||||||||||||||| ||    
T  3244499 cacattcttacccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgagacatataactc 3244598  T
Q  230 atacttgcacacaa 243  Q
    | ||||||||||||    
T  3244599 acacttgcacacaa 3244612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 25483446 - 25483331
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| |||| |||||||| |||||| |  |||||| |||||| || |||||||||||||||||||||     
T  25483446 accacactcttacccaaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttactattttatccgatgtgagacatataac 25483347  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  25483346 tcacacttgcacacaa 25483331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 54741261 - 54741339
Alignment:
Q  165 atgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||||||||| ||||||    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  54741261 atgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataattcacacttgcacacaa 54741339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 41370453 - 41370357
Alignment:
Q  142 caaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    ||||| |||||||| ||||||| ||||||||||||| ||||||    ||||||||||||| || |||||||| || ||||||||| ||| |||||||    
T  41370453 caaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttactattttatccgatttgggacatataactcacacttgca 41370357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 1731693 - 1731808
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| || |||| |||||||||||||||||||| |  |||||| |||||| || |||| |||||| |||||||||     
T  1731693 accacactcttacccaaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttactgttttatctgatgtgggacatataac 1731792  T
Q  228 tcatacttgcacacaa 243  Q
    ||| | ||||||||||    
T  1731793 tcacatttgcacacaa 1731808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 36629347 - 36629232
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||| ||| ||||||||||||| ||||||    || ||| ||||||||||||||||||||| |||||||||     
T  36629347 accacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttctatccgatgtgggacatataac 36629248  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||| ||||||    
T  36629247 tcacacttgaacacaa 36629232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 2740789 - 2740695
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||||  |||||| || |||||||||| ||||||    |||||| |||||| |||||||||||||| ||||||||| ||| ||||||||||||    
T  2740789 ttaaggctctgggtttataggtcctcttacttataaggtgttcaacctttactgttctatccgatgtgggacatataactcacacttgcacacaa 2740695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 22183331 - 22183425
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||| ||| ||||||    ||||||||||||| || ||||||||||| || |||||| ||| ||||||||||||    
T  22183331 ttaaggcaatgggtttatgggtccttttacttataaattgttcaacatttactcttttatccgatgtgggatatataactcacacttgcacacaa 22183425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 52884976 - 52884882
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| |||| |||||||| ||||||    |||||| |||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  52884976 ttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaa 52884882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 54017662 - 54017754
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacac 241  Q
    ||||||| ||||||| ||||||||||||| |||||| |  |||||| |||||| || |||| || ||| ||||||||| ||| ||||||||||    
T  54017662 ttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgacgtgggacatataactcacacttgcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 2741144 - 2741069
Alignment:
Q  165 atgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcaca 240  Q
    ||||||||||||| ||||||   ||||||| |||||| ||||||| |||||| ||||||||| ||| |||||||||    
T  2741144 atgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatataactcacacttgcaca 2741069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 16889624 - 16889691
Alignment:
Q  170 tcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgc 237  Q
    |||||||| ||||||   ||||||| |||||||||||||||||| |||||||||||| ||| ||||||    
T  16889624 tcctcttacttataaggtattcaacctttacttttctatccgatttgagacatataactcacacttgc 16889691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 22028007 - 22028122
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    ||||||||||||  |||||  ||||||| ||  ||| ||||||||||||| ||||||    |||||| |||  | || ||||||||||| ||||||||||    
T  22028007 accacattcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacctttcgtattttatccgatgtgggacatataag 22028106  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  22028107 tcacacttgcacacaa 22028122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 34646695 - 34646810
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||| ||| ||| ||||||||| ||||||    ||||||||||||| || ||||||||||| |||||||||     
T  34646695 accacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtgggacatataac 34646794  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||| ||||||    
T  34646795 tcacacttgtacacaa 34646810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 49303064 - 49302902
Alignment:
Q  83 ggggatcgtccacatcgaggttagaacaaccgcataat----atattcaaccacattcttaatcaaaattttaaggcgatgggttgatgggtcctctta- 177  Q
    |||||||||||||||||||| |||||||| |||||||     | || || ||||| |||||  |||||  ||||||| ||||||| |||||||||||||     
T  49303064 ggggatcgtccacatcgaggatagaacaatcgcataagtaagagataca-ccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttac 49302966  T
Q  178 -tttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcaca 240  Q
     ||||||| |  |||||| ||||||||| |||  |||||| ||||||||| ||| |||| ||||    
T  49302965 ttttataagatgttcaacctttacttttttatttgatgtgggacatataactcacacttacaca 49302902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 4955384 - 4955478
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||| ||||||||| ||||||    |||||| || ||| || |||||||| |||||||||||| ||| ||||||||||||    
T  4955384 ttaaggcaatgggtttatgagtcctcttacttataaggtgttcaaccttaactattttatccgatatgagacatataactcacacttgcacacaa 4955478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 10246436 - 10246342
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||||| | |||||| |  |||||| |||||| || |||||||| ||||||||||||   | ||||||||||||    
T  10246436 ttaaggctatgggtttatgggtcctctaacttataagatgttcaacctttactcttttatccgatttgagacatataacagacacttgcacacaa 10246342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 18932816 - 18932882
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgt 215  Q
    ||||||| ||||||| ||||||||||||||||||||   ||||||| |||||| || ||||||||||    
T  18932816 ttaaggcaatgggtttatgggtcctcttatttataaggtattcaacctttactattttatccgatgt 18932882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 39792967 - 39793021
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||||||||||||||||| |||||| ||||||||| ||| ||||| ||||||    
T  39792967 ttcaacatttacttttctatctgatgtgggacatataactcacacttgtacacaa 39793021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 50630801 - 50630899
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
    |||||| |||||  |||||  ||||||| ||||||| ||||||||||||| |||||||   |||||| |||||| || ||||||||||  |||||||||    
T  50630801 accacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactattttatccgatgtaggacatataa 50630899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 55933170 - 55933280
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  ||||| |||||||| ||||||| ||||||||||||| ||||||    ||||||  ||||| || ||||||||||  |||||||||     
T  55933170 accacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacccttactattttatccgatgtaggacatataac 55933269  T
Q  228 tcatacttgca 238  Q
    ||| |||||||    
T  55933270 tcacacttgca 55933280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 16888922 - 16888971
Alignment:
Q  188 attcaacatttacttttctatccgatgtgagacatataagtcatacttgc 237  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||| ||||||    
T  16888922 attcaacctttacttttctatccgatgtgggacatataactcacacttgc 16888971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 43827600 - 43827564
Alignment:
Q  80 tcgggggatcgtccacatcgaggttagaacaaccgca 116  Q
    |||||||| ||||||||||||||||||||||||||||    
T  43827600 tcgggggaccgtccacatcgaggttagaacaaccgca 43827564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 243
Target Start/End: Complemental strand, 50002589 - 50002421
Alignment:
Q  78 gttcgggggatcgtccacatcgaggttagaacaaccgca----taatatattcaaccacattcttaatcaaaattttaaggcgatgggttgatgggtcct 173  Q
    |||||||||| || ||||||||||| |||||||||||||    ||| | |  || ||||| |||||  |||||  ||||| | |||| || |||||||||    
T  50002589 gttcgggggaccgcccacatcgaggctagaacaaccgcacaagtaagagagaca-ccacactcttacccaaaaccttaagacaatggatttatgggtcct 50002491  T
Q  174 cttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||| ||| ||    |||||| |||||| || ||||||||||||||||||||| ||| ||||||| ||||    
T  50002490 cttacttaaaaagtgttcaacctttactcttttatccgatgtgagacatataactcacacttgcaaacaa 50002421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 20826312 - 20826229
Alignment:
Q  143 aaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
    ||||| ||||||| ||||||| |||||| |||||| ||||||    |||||| |||||| || ||||||||||| |||||||||    
T  20826312 aaaatgttaaggctatgggtttatgggttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatataa 20826229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 3700414 - 3700360
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||||||||| || ||||||||||  ||||||||| ||| ||||||||||||    
T  3700414 ttcaacatttactcttttatccgatgtaggacatataactcacacttgcacacaa 3700360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 36572108 - 36572014
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| |||| || ||||||| ||||| ||||||    ||||||||||||| || ||| ||||||| ||||||||| ||| ||||| ||||||    
T  36572108 ttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactcttttattcgatgtgggacatataactcacacttgtacacaa 36572014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 44620838 - 44620784
Alignment:
Q  62 ttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaaccgca 116  Q
    ||||||||| ||||||| | |||||| |||||||||||||| || ||||||||||    
T  44620838 ttggatcatgaggggagcttgggggaccgtccacatcgaggatataacaaccgca 44620784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 45489438 - 45489492
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| |||||| || ||||||||||||||||||||| ||| ||||| ||||||    
T  45489438 ttcaacctttactcttttatccgatgtgagacatataattcacacttgtacacaa 45489492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 52884744 - 52884690
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| |||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  52884744 ttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaa 52884690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 54109002 - 54108928
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacata 223  Q
    ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| ||||||    
T  54109002 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacata 54108928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 6975543 - 6975600
Alignment:
Q  169 gtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
    ||||||||| |||||| | ||||||| |||||| || |||| ||||||||||||||||    
T  6975543 gtcctcttacttataagatattcaacctttactattttatcggatgtgagacatataa 6975600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 39404187 - 39404146
Alignment:
Q  72 aggggagttcgggggatcgtccacatcgaggttagaacaacc 113  Q
    ||||||| |||||||| |||||||||||||| ||||||||||    
T  39404187 aggggagctcgggggaccgtccacatcgaggctagaacaacc 39404146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 51768029 - 51768086
Alignment:
Q  54 agtagatgttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaa 111  Q
    |||| ||||||| |||| |||| |||| ||| || |||||||||||||||||||||||    
T  51768029 agtatatgttgggtcatgagggaagtttgggagaccgtccacatcgaggttagaacaa 51768086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 8e-20; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 16569285 - 16569191
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||||||| ||||||   ||||||| |||||| |||||||||||||||||||||||| ||| ||||||| ||||    
T  16569285 ttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaa 16569191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 16596377 - 16596471
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||||||| ||||||   ||||||| |||||| |||||||||||||||||||||||| ||| ||||||| ||||    
T  16596377 ttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaa 16596471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 28301613 - 28301706
Alignment:
Q  150 taaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| ||||||| ||||||||||||| ||||||    |||| | ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaa 28301706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 7517690 - 7517575
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| |||||||||     
T  7517690 accacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataac 7517591  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  7517590 tcacacttgcacacaa 7517575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 47129184 - 47129097
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttg 236  Q
    |||| |||||||||| ||||||||||||| |||||| |  |||||| |||||| || ||||||||||||||||||||| ||| |||||    
T  47129184 ttaaagcgatgggtttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtgagacatataactcacacttg 47129097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 1085685 - 1085779
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  1085685 ttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaa 1085779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 24177530 - 24177430
Alignment:
Q  143 aaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacaca 242  Q
    |||| |||||||| ||||||| |||||||| |||| ||||||    |||| | |||||| || ||||||||||| ||||||||| |||||||||||||||    
T  24177530 aaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttttatccgatgtgggacatataactcatacttgcacaca 24177431  T
Q  243 a 243  Q
    |    
T  24177430 a 24177430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 40230368 - 40230456
Alignment:
Q  157 atgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaata 245  Q
    ||||||| ||||||||||||| |||||| |  |||||| ||||||||| ||| ||||||| ||||||||| | | ||||||||||||||    
T  40230368 atgggtttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtgggacatataacttacacttgcacacaata 40230456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 7554135 - 7554020
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| |||| |||||||| ||||||    |||||| |||||| || ||||||||||| |||||||||     
T  7554135 accacactcttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataac 7554036  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  7554035 tcacacttgcacacaa 7554020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 8128489 - 8128604
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||| |||||  ||||||  ||||||| |||||||||||||  |||||    |||||| |||| ||||||||||||| || |||||||||     
T  8128489 accacactcttaaccaaaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaacctttatttttctatccgatatgggacatataac 8128588  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  8128589 tcacacttgcacacaa 8128604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 6054670 - 6054572
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
    |||||| |||||  |||||  ||||||| ||| ||| ||||||||||||| ||||||    ||||||||||||| || |||||||||||||||||||||    
T  6054670 accacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtgagacatataa 6054572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 40094843 - 40094937
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||| ||||||||| ||||||||||||| ||||||    || ||| |||||| || ||| ||||||||||||||||| ||| ||||||||||||    
T  40094843 ttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttactcttttattcgatgtgagacatataactcacacttgcacacaa 40094937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 41910657 - 41910757
Alignment:
Q  143 aaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacaca 242  Q
    ||||| ||||| | ||||||| ||||||||||| | ||||||   ||||||| |||||| || ||||||||||| ||||||||| ||| |||| ||||||    
T  41910657 aaaatcttaagccaatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtgggacatataactcacacttacacaca 41910756  T
Q  243 a 243  Q
    |    
T  41910757 a 41910757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 30244380 - 30244265
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| ||| ||||||||| ||||||    |||||| |||||| || ||||||||||| |||||||||     
T  30244380 accacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactcttttatccgatgtgggacatataac 30244281  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||| ||||||    
T  30244280 tcacacttgtacacaa 30244265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 34218082 - 34218197
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||| | ||||||| ||| ||||||| | ||||||    |||||||||||||||| |||||||||||||||||||||     
T  34218082 accacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttacttttttatccgatgtgagacatataac 34218181  T
Q  228 tcatacttgcacacaa 243  Q
    ||| | ||| ||||||    
T  34218182 tcacatttgtacacaa 34218197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 37393231 - 37393180
Alignment:
Q  68 cataaggggagttcgggggatcgtccacatcgaggttagaacaaccgcataa 119  Q
    |||||||| || |||||||||||||||||||||||||||| ||||| |||||    
T  37393231 cataagggaaggtcgggggatcgtccacatcgaggttagagcaaccacataa 37393180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 22566731 - 22566825
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| ||||||| | ||| ||||||| ||||    
T  22566731 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactcacacttgcatacaa 22566825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 36623049 - 36622953
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaata 245  Q
    ||||||| |||| || |||| ||||| || |||||| |  || ||| |||||| || ||||||||||| ||||||||| ||| ||||||||||||||    
T  36623049 ttaaggcaatggatttatggatcctcctacttataaaatgtttaacctttactattttatccgatgtgggacatataactcacacttgcacacaata 36622953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 23425 - 23540
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| || |||| ||||||||||||| ||||||    |||||| |||||| || |||||||||||  ||||||||     
T  23425 accacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattgtatccgatgtggaacatataac 23524  T
Q  228 tcatacttgcacacaa 243  Q
    ||| | ||||||||||    
T  23525 tcacaattgcacacaa 23540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 30032735 - 30032692
Alignment:
Q  73 ggggagttcgggggatcgtccacatcgaggttagaacaaccgca 116  Q
    |||||| |||||||| |||||||||||||| |||||||||||||    
T  30032735 ggggagctcgggggaccgtccacatcgaggatagaacaaccgca 30032692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 30244771 - 30244696
Alignment:
Q  168 ggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||||||||||||||    |||||| |||||| || ||||| ||||| ||||||||| ||| ||||||||||||    
T  30244771 ggtcctcttatttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaa 30244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 36967345 - 36967392
Alignment:
Q  196 tttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||||| ||||||||||||||||||||| ||| ||||| ||||||    
T  36967345 tttacttttttatccgatgtgagacatataactcacacttgtacacaa 36967392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 45754825 - 45754711
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| ||| ||| ||||| ||||||    ||||||||||||| || ||||||||||| |||||||||     
T  45754825 accacactcttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttactattttatccgatgtg-gacatataac 45754727  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||| ||||||    
T  45754726 tcacacttgtacacaa 45754711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 118410 - 118464
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| |||||||||||||| |||||| ||||||||| | | ||||||||||||    
T  118410 ttcaacctttacttttctatctgatgtgggacatataacttacacttgcacacaa 118464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 10341871 - 10341829
Alignment:
Q  199 acttttctatccgatgtgagacatataagtcatacttgcacac 241  Q
    |||||||||||||||||||||||||||| | ||| ||||||||    
T  10341871 acttttctatccgatgtgagacatataacttatatttgcacac 10341829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 36109026 - 36109080
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| |||||| || |||||||||||||| |||||| ||| ||||||||||||    
T  36109026 ttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaa 36109080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 45434709 - 45434631
Alignment:
Q  165 atgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||||||||| ||||||    |||||| ||||||||| ||||||||||| ||||||||| | | ||||| ||||||    
T  45434709 atgggtcctcttacttataaggtgttcaacctttacttttttatccgatgtgggacatataacttacacttgtacacaa 45434631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 37533079 - 37533168
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    ||||||| ||| ||| ||||||||||||| ||||||    |||||| |||||| || ||||| ||||| ||||||||| ||| |||||||    
T  37533079 ttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacacttgca 37533168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 41910583 - 41910616
Alignment:
Q  80 tcgggggatcgtccacatcgaggttagaacaacc 113  Q
    ||||| ||||||||||||||||||||||||||||    
T  41910583 tcgggagatcgtccacatcgaggttagaacaacc 41910616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 5467 - 5352
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||| ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| ||||||||||||||  ||||||||     
T  5467 accacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatataac 5368  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  5367 tcacacttgcacacaa 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 5070 - 4977
Alignment:
Q  150 taaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| ||| ||| ||||||| | ||| |||||| | ||| ||| |||||| |||| ||||||||||||||||||| ||| ||||||||||||    
T  5070 taaggcaatgagtttatgggtctttttacttataagatattaaacctttactgttctctccgatgtgagacatataattcacacttgcacacaa 4977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 5e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 2579920 - 2580035
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    ||||||||||||  |||||  |||||||  |||||| ||||||||||||| |||||||   |||||| |||||| || ||||||||||| |||||||||     
T  2579920 accacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttactcttttatccgatgtgggacatataac 2580019  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  2580020 tcacacttgcacacaa 2580035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 10074060 - 10074154
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||||||| ||||||    |||||| ||||||||||||||||||||| || |||||| |||  |||||||||||    
T  10074060 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatgtgggatatataactcacccttgcacacaa 10074154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 26544157 - 26544049
Alignment:
Q  130 cacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtc 229  Q
    |||| ||||| ||||||  |||||||| |||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| ||||||||| ||    
T  26544157 cacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattttatccgatgtgggacatataactc 26544058  T
Q  230 atacttgca 238  Q
    | |||||||    
T  26544057 acacttgca 26544049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 10074411 - 10074526
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||| ||| ||||||||||||| ||||||    |||||| ||||||||||||||||||||| ||| | |||     
T  10074411 accacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggacctctaac 10074510  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  10074511 tcacacttgcacacaa 10074526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 35210314 - 35210204
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| |||| || ||||||||||||| ||||||    |||||| |||||| || |||||||||||||||||||||     
T  35210314 accacactcttacccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataac 35210215  T
Q  228 tcatacttgca 238  Q
    ||| |||||||    
T  35210214 tcacacttgca 35210204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 2843736 - 2843683
Alignment:
Q  60 tgttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaacc 113  Q
    ||||||||||| ||||||||| |||||| |||||||||||||| ||||||||||    
T  2843736 tgttggatcatgaggggagttagggggaccgtccacatcgaggctagaacaacc 2843683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 16455088 - 16455032
Alignment:
Q  60 tgttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaaccgca 116  Q
    |||||||| || ||||||| |||||||| |||||||||||||| |||||||||||||    
T  16455088 tgttggattatgaggggagctcgggggaccgtccacatcgaggctagaacaaccgca 16455032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 2578883 - 2578997
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||  ||| ||| |||| |||||||||||||||   ||||||||||||||||| ||||||||| | |||||||||     
T  2578883 accacactcttacccaaaaccttaaggtaatgagtttatggatcctcttatttataaggtattcaacatttactttt-tatccgatgagggacatataaa 2578981  T
Q  228 tcatacttgcacacaa 243  Q
    ||| |||||| |||||    
T  2578982 tcacacttgctcacaa 2578997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 16107788 - 16107673
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| ||| ||||||||| ||||||    || ||| ||||||||| |||||||||||| ||||||||     
T  16107788 accacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaacctttacttttttatccgatgtgacacatataac 16107689  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||| ||||||    
T  16107688 tcacacttgtacacaa 16107673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 2378236 - 2378126
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    ||||||||||||   ||||  ||||||  ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| |||||||||     
T  2378236 accacattcttacctaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataac 2378137  T
Q  228 tcatacttgca 238  Q
    ||| |||||||    
T  2378136 tcacacttgca 2378126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 14748386 - 14748496
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  |||| || ||| ||| ||||||||||||||||||||    |||||| |||||| || ||||||||||| |||||||||     
T  14748386 accacactcttacccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacatataac 14748485  T
Q  228 tcatacttgca 238  Q
    ||| |||||||    
T  14748486 tcacacttgca 14748496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 16108152 - 16108058
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||||||| ||||||    ||||||||||||| || |||| ||||||  |||||||| ||| ||||| ||||||    
T  16108152 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaa 16108058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 29518613 - 29518503
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||  ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| |||||||||     
T  29518613 accacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataac 29518514  T
Q  228 tcatacttgca 238  Q
    ||| |||||||    
T  29518513 tcacacttgca 29518503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 29519030 - 29518920
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||  ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| |||||||||     
T  29519030 accacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataac 29518931  T
Q  228 tcatacttgca 238  Q
    ||| |||||||    
T  29518930 tcacacttgca 29518920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 32741289 - 32741179
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||  ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| |||||||||     
T  32741289 accacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataac 32741190  T
Q  228 tcatacttgca 238  Q
    ||| |||||||    
T  32741189 tcacacttgca 32741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 236
Target Start/End: Complemental strand, 2377864 - 2377756
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || || |||||||| |||||||||     
T  2377864 accacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataac 2377765  T
Q  228 tcatacttg 236  Q
    ||| |||||    
T  2377764 tcacacttg 2377756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 243
Target Start/End: Original strand, 2578420 - 2578605
Alignment:
Q  60 tgttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaaccgcataatatattca---accacattcttaatcaaaattttaaggcg 156  Q
    |||||| |||| ||||| | | |||||| |||||||||||||| ||||||||||||| ||   |   |   |||||| |||||  |||||  |||||||     
T  2578420 tgttgggtcatgaggggggctagggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggct 2578519  T
Q  157 atgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||||||||| ||||||    |||||| |||||| || |||||| |||| ||||||||| ||| ||||| ||||||    
T  2578520 atgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccg-tgtgggacatataactcacacttgtacacaa 2578605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 16454744 - 16454700
Alignment:
Q  72 aggggagttcgggggatcgtccacatcgaggttagaacaaccgca 116  Q
    ||||||| |||||||| |||||||||||||| |||||||||||||    
T  16454744 aggggagctcgggggaccgtccacatcgaggctagaacaaccgca 16454700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 238
Target Start/End: Complemental strand, 1846909 - 1846748
Alignment:
Q  80 tcgggggatcgtccacatcgaggttagaacaaccgcataatatattca---accacattcttaatcaaaattttaaggcgatgggttgatgggtcctctt 176  Q
    |||||||| |||||||||||||| ||||||||||||| ||   |   |   |||||| |||||  |||||  ||||||| |||| || |||||| |||||    
T  1846909 tcgggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtgctctt 1846810  T
Q  177 atttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    | ||||||    |||||| |||||| || |||||||||||||||||| || ||| |||||||    
T  1846809 acttataaggtgttcaacctttactattttatccgatgtgagacatagaattcacacttgca 1846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 3409747 - 3409660
Alignment:
Q  151 aaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    ||||| ||||||| ||||||||||||| |||||| |  |||||| |||||| || |||| ||||||  |||||||| ||| |||||||    
T  3409747 aaggcaatgggtttatgggtcctcttacttataagatgttcaacttttactattttatctgatgtggtacatataactcacacttgca 3409660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 3409369 - 3409259
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||| ||| ||||||||||||| ||||||    |||||| |||||| || |||| |||||| |||||||||     
T  3409369 accacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataac 3409270  T
Q  228 tcatacttgca 238  Q
    ||| |||||||    
T  3409269 tcacacttgca 3409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 243
Target Start/End: Complemental strand, 16454684 - 16454570
Alignment:
Q  129 ccacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagt 228  Q
    ||||| |||||  |||||| ||||||| ||||||| ||||||||||||| ||||||    |||||| |||| | || |||| |||||| |||| |||| |    
T  16454684 ccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttattcttttatctgatgtgggacacataact 16454585  T
Q  229 catacttgcacacaa 243  Q
    || ||||| ||||||    
T  16454584 cacacttgtacacaa 16454570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 17135181 - 17135215
Alignment:
Q  192 aacatttacttttctatccgatgtgagacatataa 226  Q
    ||||||||||| |||||||||||||||||||||||    
T  17135181 aacatttacttctctatccgatgtgagacatataa 17135215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 5e-18; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 41632892 - 41632777
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||| |||| ||  |||||| ||||||||||||| ||||||    |||||| |||||||||||||||||||||||||||||||     
T  41632892 accacactcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataac 41632793  T
Q  228 tcatacttgcacacaa 243  Q
    | | ||||||||||||    
T  41632792 ttacacttgcacacaa 41632777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 9498702 - 9498800
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
    |||||| |||||  |||||| ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| ||||||| ||||||||||||||||    
T  9498702 accacactcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattctatctgatgtgagacatataa 9498800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 26075231 - 26075325
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||||||||||||| ||| ||||| ||||||    
T  26075231 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgagacatataaatcacacttgtacacaa 26075325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 26074194 - 26074309
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| |||||||||||||  ||| |    |||||| ||||||||| ||||||||||| |||||||||     
T  26074194 accacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacctttacttttttatccgatgtgtgacatataac 26074293  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  26074294 tcacacttgcacacaa 26074309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 39309754 - 39309679
Alignment:
Q  168 ggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||||||||||||||   ||||||||||||  || ||||||||||| ||||||||| ||||||||| ||||||    
T  39309754 ggtcctcttatttataatgtgttcaacatttacccttttatccgatgtgggacatataactcatacttgtacacaa 39309679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 36568676 - 36568730
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  36568676 ttcaacttttacttttctatccgatgtgggacatataactcacacttgcacacaa 36568730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 41170744 - 41170646
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
    |||||| |||||  |||||  ||||||| ||||||| ||||||||||||| |||||| |  |||||| |||||| || ||||||||||| |||||||||    
T  41170744 accacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataa 41170646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 31509662 - 31509618
Alignment:
Q  199 acttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  31509662 acttttctatccgatgtgagacatataactcacacttgcacacaa 31509618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 1028597 - 1028680
Alignment:
Q  160 ggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||| ||||||||||||| ||||||    |||| | ||||||||||||||||||||| ||||||||| ||| ||||| ||||||    
T  1028597 ggtttatgggtcctcttacttataaagtgttcatcctttacttttctatccgatgtgggacatataactcacacttgtacacaa 1028680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 15370209 - 15370094
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  |||||||  ||| || ||||||||||||| |||||| |  |||||| |||||| || ||| ||||||| |||||||||     
T  15370209 accacactcttacccaaaaccttaaggctgtggatttatgggtcctcttacttataagatgttcaacctttactattttattcgatgtgggacatataac 15370110  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  15370109 tcacacttgcacacaa 15370094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 40296386 - 40296477
Alignment:
Q  151 aaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacaca 242  Q
    ||||| ||||||| ||||||||||||| ||||||    |||||| ||| || || ||||||||||| ||||||||| ||| |||||||||||    
T  40296386 aaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttctattttatccgatgtgggacatataactcacacttgcacaca 40296477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 42524785 - 42524719
Alignment:
Q  169 gtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttg 236  Q
    ||||||||||| |||| |  |||||| ||||||||||||||||||||||||||||||| ||| |||||    
T  42524785 gtcctcttattcataagatgttcaac-tttacttttctatccgatgtgagacatataattcacacttg 42524719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 6224285 - 6224191
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||||||| ||| ||||||||||||| ||||||    |||||| |||||| || ||||||| ||| ||||||||| ||| ||||| ||||||    
T  6224285 ttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactcacacttgtacacaa 6224191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 42508701 - 42508607
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||| ||||||||| |||| | |  || ||| ||||||||||||||||||||| || |||||| ||| ||||| ||||||    
T  42508701 ttaaggcaatgggtttatgagtcctcttacttattagatgtttaacctttacttttctatccgatgtgggatatataattcacacttgtacacaa 42508607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 3295323 - 3295375
Alignment:
Q  61 gttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaacc 113  Q
    |||||||||| ||||||||  |||||| |||||||||||||| ||||||||||    
T  3295323 gttggatcatgaggggagtgagggggaccgtccacatcgaggctagaacaacc 3295375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 41635254 - 41635346
Alignment:
Q  143 aaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatactt 235  Q
    ||||||||||| | |||| || |||| |||||||||||||||    ||||||||||||| || |||| |||| || |||||||| ||||||||    
T  41635254 aaaattttaagacaatggatttatggatcctcttatttataaggtgttcaacatttactcttttatctgatgggaaacatataactcatactt 41635346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 12662700 - 12662815
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||| | |||| || ||||||  ||||| |||||| |  |||||| |||||| || ||||||||||| |||||||||     
T  12662700 accacactcttacccaaaaacttaagacaatggatttatgggttttcttacttataaaatgttcaacctttactattttatccgatgtgggacatataac 12662799  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  12662800 tcacacttgcacacaa 12662815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 13415840 - 13415923
Alignment:
Q  160 ggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||| ||||||||||||| ||||||    |||||| ||||||  | ||||||||||| ||||||||| ||| ||||||||||||    
T  13415840 ggtttatgggtcctcttacttataaggtgttcaacctttactaatttatccgatgtgggacatataactcacacttgcacacaa 13415923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 18603189 - 18603276
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttg 236  Q
    ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || |||| |||||| ||||||||| ||| |||||    
T  18603189 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttg 18603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 26074722 - 26074607
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || |||||||| ||  ||||||||     
T  26074722 accacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatatggaacatataac 26074623  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||| ||||||    
T  26074622 tcacacttgtacacaa 26074607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 33747881 - 33747782
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||| ||||||| ||| ||| |||| |||||||| ||||||   ||| ||| |||||| || ||||||||||| ||||||||||    
T  33747881 accacactcttatccaaaatcttaaggcaatgagtttatggatcctcttacttataaagtatttaacctttactattttatccgatgtgggacatataag 33747782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 35914959 - 35914852
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    ||||||||||||  ||| | |||| ||| |||| || | ||||| ||||| |||||| |  |||||| |||||| || ||||||||||| |||||||||     
T  35914959 accacattcttatccaataatttagggcaatggatttacgggtcttcttacttataaaatgttcaacctttactcttttatccgatgtgtgacatataac 35914860  T
Q  228 tcatactt 235  Q
    ||||||||    
T  35914859 tcatactt 35914852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 116
Target Start/End: Original strand, 42405588 - 42405631
Alignment:
Q  73 ggggagttcgggggatcgtccacatcgaggttagaacaaccgca 116  Q
    |||||| |||||||| |||||||||||||| |||||||||||||    
T  42405588 ggggagctcgggggaccgtccacatcgaggctagaacaaccgca 42405631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 299578 - 299484
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||| ||| ||||||| ||||| ||||||    |||||| |||||| || ||||||||||| ||||||||| ||| |||||| |||||    
T  299578 ttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcgcacaa 299484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 623867 - 623818
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    |||||| |||||| || ||||||||||||||||||||| ||| |||||||    
T  623867 ttcaacctttactattatatccgatgtgagacatataactcacacttgca 623818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 27502013 - 27502066
Alignment:
Q  60 tgttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaacc 113  Q
    |||||| |||| ||||||| | |||||| |||||||||||||| ||||||||||    
T  27502013 tgttgggtcatgaggggagctagggggaccgtccacatcgaggatagaacaacc 27502066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 34753094 - 34753171
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
    ||||||| || |||| ||||||| ||||| ||||||    |||||| ||||||||||||||| ||||| |||||||||    
T  34753094 ttaaggcaatcggtttatgggtcttcttacttataaggtgttcaacttttacttttctatccaatgtgggacatataa 34753171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 22077580 - 22077658
Alignment:
Q  165 atgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||||||||| ||||||    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  22077580 atgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataactcacacttgcacacaa 22077658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 41184494 - 41184588
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||||||||||||| ||| ||||||||||||    
T  41184494 ttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaa 41184588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 21378118 - 21378204
Alignment:
Q  157 atgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||||||||| |||||| | ||||||| |||||| ||||||||||| || ||||||||| | | ||||||||||||    
T  21378118 atgggtttatgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaa 21378204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 44290527 - 44290616
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    ||||||| ||||||| ||||||||||||| |||||| |  |||||| |||||| || ||||||||||| ||||||||| ||| |||||||    
T  44290527 ttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacacttgca 44290616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 17294687 - 17294572
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| |||||||||     
T  17294687 accacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatgtgggacatataac 17294588  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||| ||||||    
T  17294587 tcacacttgtacacaa 17294572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 24600406 - 24600477
Alignment:
Q  172 ctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| ||||||||  |||||| |||||||||||||||||| || ||||||||| ||| ||||||||||||    
T  24600406 ctcttacttataatatgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaa 24600477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 34365035 - 34364920
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| ||||||||||||| ||||||    |||||| |||| | || ||||||||||| |||||||||     
T  34365035 accacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatccgatgtgtgacatataac 34364936  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  34364935 tcacacttgcacacaa 34364920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 41157485 - 41157370
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| ||||| ||||||  | ||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || |||| |||||| |||||||||     
T  41157485 accacactcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttactcttttatctgatgtgggacatataac 41157386  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  41157385 tcacacttgcacacaa 41157370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 34364596 - 34364502
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| | || |||||||| ||||||    |||||| |||||| || ||||||||||||||||||||| ||| ||||||||||||    
T  34364596 ttaaggctatgggtttacggatcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaa 34364502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 22077900 - 22077993
Alignment:
Q  152 aggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaata 245  Q
    |||| ||| ||| ||||||||||||| |||||| |  |||||| |||| ||||||||||||| | | |||||||| ||| ||||||||||||||    
T  22077900 aggctatgagtttatgggtcctcttacttataagatgttcaacctttatttttctatccgatttaaaacatataactcacacttgcacacaata 22077993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 44290894 - 44290983
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| ||||||||| ||| |||||||    
T  44290894 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 44290983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 41142461 - 41142370
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcaca 240  Q
    ||||||| ||||||| ||||||||| ||| ||||||    |||||| |||||| || ||||||||||| ||||||||| ||| |||||||||    
T  41142461 ttaaggcaatgggtttatgggtccttttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcaca 41142370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 5320034 - 5320128
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||| ||| ||||||||||| | ||||||    |||||| |||||||||||||||||||||  |||||||| ||| ||||||| ||||    
T  5320034 ttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatataactcacacttgcatacaa 5320128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 5528843 - 5528900
Alignment:
Q  169 gtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
    |||||||||||||||| |  |||||| |||||| || |||||||||||||||||||||    
T  5528843 gtcctcttatttataagatgttcaacctttactcttttatccgatgtgagacatataa 5528900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 11977450 - 11977405
Alignment:
Q  71 aaggggagttcgggggatcgtccacatcgaggttagaacaaccgca 116  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||||    
T  11977450 aagggaagttcgggggaccgtccacatcgaggctagaacaaccgca 11977405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 5528742 - 5528790
Alignment:
Q  71 aaggggagttcgggggatcgtccacatcgaggttagaacaaccgcataa 119  Q
    ||||||||| |||||| || |||||||||||| ||||||||||||||||    
T  5528742 aaggggagtccggggggtcatccacatcgaggatagaacaaccgcataa 5528790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 37556221 - 37556106
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttact-tttctatccgatgtgagacatataa 226  Q
    |||||| |||||  |||||  ||||||| ||||||| |||| |||||||| |||||| |  |||||| |||||| ||| ||||||||||| |||||||||    
T  37556221 accacactcttacccaaaaccttaaggctatgggtttatgg-tcctcttacttataagatgttcaacctttactatttttatccgatgtgggacatataa 37556123  T
Q  227 gtcatacttgcacacaa 243  Q
     ||| ||||| ||||||    
T  37556122 ctcacacttgtacacaa 37556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 3537226 - 3537305
Alignment:
Q  159 gggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    ||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| ||||||||| ||| |||||||    
T  3537226 gggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 3537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 116
Target Start/End: Original strand, 44290814 - 44290857
Alignment:
Q  73 ggggagttcgggggatcgtccacatcgaggttagaacaaccgca 116  Q
    |||||| |||||||| |||||||||||||| |||||||||||||    
T  44290814 ggggagctcgggggaccgtccacatcgaggctagaacaaccgca 44290857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 44685498 - 44685451
Alignment:
Q  196 tttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||||||||||||||| || ||||||||| ||| ||||||||||||    
T  44685498 tttacttttctatccgatatgggacatataactcacacttgcacacaa 44685451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 45839676 - 45839622
Alignment:
Q  188 attcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| |||| |||||||||||||||| ||||||||| ||||||||| ||||||    
T  45839676 attcaaccttta-ttttctatccgatgtgggacatataactcatacttgtacacaa 45839622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 50052103 - 50052178
Alignment:
Q  160 ggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatactt 235  Q
    |||| ||||||||||||| |||||| |  |||||| |||||| || ||||||||||| ||||||||| ||| ||||    
T  50052103 ggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacactt 50052178  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 66581 - 66635
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| |||||||||||||||||| ||  |||||||| ||| ||||||||||||    
T  66581 ttcaacctttacttttctatccgatatggaacatataactcacacttgcacacaa 66635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 3875400 - 3875494
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||| ||||||||| ||||||    | |||| ||||||||| ||||||||||| ||||||||| | |  |||||||||||    
T  3875400 ttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttacttttttatccgatgtgtgacatataactgactcttgcacacaa 3875494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 22077243 - 22077285
Alignment:
Q  201 ttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||    
T  22077243 ttttctatccgatgtgggacatataactcacacttgcacacaa 22077285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 24132054 - 24132148
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||| ||| |||| ||| |||||||||||    |||||| ||||||||||||||||||| | ||||||||| ||| | ||||| ||||    
T  24132054 ttaaggcaatgagtttatggatccccttatttataaggtgttcaacctttacttttctatccgatgagggacatataactcacagttgcatacaa 24132148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 39066309 - 39066363
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| |||||||||||||||||||||  | |||||| ||| ||||||||||||    
T  39066309 ttcaacctttacttttctatccgatgtggaatatataactcacacttgcacacaa 39066363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 1187483 - 1187528
Alignment:
Q  199 acttttctatccgatgtgagacatataagtcatacttgcacacaat 244  Q
    |||||| ||| ||||||||||||||||| ||| |||||||||||||    
T  1187483 acttttatattcgatgtgagacatataattcacacttgcacacaat 1187528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 44290448 - 44290489
Alignment:
Q  73 ggggagttcgggggatcgtccacatcgaggttagaacaaccg 114  Q
    |||||| |||||||| |||||||||||||| |||||||||||    
T  44290448 ggggagctcgggggaccgtccacatcgaggctagaacaaccg 44290489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 45084455 - 45084378
Alignment:
Q  165 atgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacaca 242  Q
    ||||||||||||| ||||||    |||||| |||||| || ||||||||||| || |||||| ||| |||||||||||    
T  45084455 atgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 30359381 - 30359266
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| ||||||||||||  ||||||    ||||||||||||| || |||||||||||||||||||||     
T  30359381 accacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgagacatataac 30359282  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||| ||||||    
T  30359281 tcacacttgtacacaa 30359266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 40518662 - 40518575
Alignment:
Q  158 tgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaata 245  Q
    |||||| ||||||||||||||||||||    |||||| |||||||||||||| |||||| ||||||||| ||| ||||| ||||||||    
T  40518662 tgggtttatgggtcctcttatttataaggtgttcaacctttacttttctatctgatgtgggacatataactcacacttgaacacaata 40518575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 9608834 - 9608740
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| |||||||| ||||||| ||||| ||||||    |||||| |||||||||||||||||| || ||||||||| ||| ||||||||||||    
T  9608834 ttaaggtgatgggtttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaa 9608740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 41972254 - 41972153
Alignment:
Q  142 caaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacac 241  Q
    ||||| |||| ||| ||||||| ||||||||| | | ||||||    |||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  41972254 caaaactttatggcaatgggtttatgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacac 41972155  T
Q  242 aa 243  Q
    ||    
T  41972154 aa 41972153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 33113415 - 33113530
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||| ||||||| ||| ||| ||||||||||||| |||||| |  |||||| |||||| || ||||||||||  |||||||||     
T  33113415 accacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttactattttatccgatgtaggacatataac 33113514  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||| ||||||    
T  33113515 tcaaacttgtacacaa 33113530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 43274827 - 43274934
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| ||||| ||||||  ||||| | || |||| ||||||||||||| |||||||| ||||||| |||||| || |||| ||||||| ||||||||     
T  43274827 accacactcttactcaaaaccttaagacaataggtttatgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatataac 43274926  T
Q  228 tcatactt 235  Q
    ||| ||||    
T  43274927 tcacactt 43274934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 147560 - 147454
Alignment:
Q  129 ccacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagt 228  Q
    ||||| |||||  ||||| |||||||| || |||| ||||||||||||||||||||    |||||| |||||| || ||||||||||| ||||||||| |    
T  147560 ccacactcttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaacctttactcttttatccgatgtgggacatataact 147461  T
Q  229 catactt 235  Q
    || ||||    
T  147460 cacactt 147454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 5420740 - 5420646
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||| ||||||||| |||||| |  |||||| |||||| |||||||||||||| |||||||||  || ||||||| ||||    
T  5420740 ttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttactattctatccgatgtgggacatataatacacacttgcatacaa 5420646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 9309444 - 9309350
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||| ||| | ||||||||||| ||||||    ||||||||||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  9309444 ttaaggcaatgagtttaagggtcctcttacttataaggtgttcaacatttactcttttatccgatgtgggacatataactcacacttgcacacaa 9309350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 70343 - 70420
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
    |||||||  |||||| ||||||||||||| |||||| |  ||||||||||||| || ||||||||||| |||||||||    
T  70343 ttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactcttttatccgatgtgggacatataa 70420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 8794189 - 8794106
Alignment:
Q  160 ggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||| ||| ||||||||| |||||| |  ||||||||||| | || ||||||||||||||||||||| ||| ||||| ||||||    
T  8794189 ggtttatgagtcctcttacttataagatgttcaacatttattcttttatccgatgtgagacatataactcacacttgtacacaa 8794106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 30359719 - 30359604
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||| ||||||  ||||||| ||| ||||||||| ||||||    |||||| |||||| || |||| ||||||||||||||||     
T  30359719 accacactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttcaacttttactcttttatctgatgtgagacatataac 30359620  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||| ||||||    
T  30359619 tcacacttgtacacaa 30359604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 226
Target Start/End: Original strand, 43398062 - 43398217
Alignment:
Q  76 gagttcgggggatcgtccacatcgaggttagaacaaccgca-taatatattcaac--cacattcttaatcaaaattttaaggcgatgggttgatgggtcc 172  Q
    ||||||||||||||| |||||||||||||||| |||||||| || || |   |||  ||||||||||  ||||| |||||||| |||  || ||||||||    
T  43398062 gagttcgggggatcg-ccacatcgaggttagagcaaccgcactagtaaaagaaacgccacattcttatccaaaactttaaggcaatgaatttatgggtcc 43398160  T
Q  173 tc---ttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
    ||   ||||||||||    |||||| |||||||||||||||||| ||||| ||||||    
T  43398161 tcctcttatttataaggtgttcaacctttacttttctatccgatatgagatatataa 43398217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 45122166 - 45122221
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaat 244  Q
    |||||| |||||| || ||||||||||||||||||||| ||| |||||||||||||    
T  45122166 ttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaat 45122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 147878 - 147824
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||||||||||||| |||| |||||| ||||||||| ||| ||||||||||||    
T  147878 ttcaacatttacttttttatcagatgtgggacatataactcacacttgcacacaa 147824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 3038359 - 3038453
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||| ||| ||||||    |||||| |||||| || ||||||||||| ||||||||| ||| ||||| ||||||    
T  3038359 ttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcacacttgtacacaa 3038453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 9609174 - 9609108
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgt 215  Q
    ||||||||||||||| ||||||| ||||| |||||| |  |||||| |||||||||||||| |||||    
T  9609174 ttaaggcgatgggtttatgggtcatcttacttataagatgttcaacctttacttttctatctgatgt 9609108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 5916047 - 5915992
Alignment:
Q  60 tgttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaaccgca 116  Q
    |||||||||||  ||||||||||||| | |||||||||||||| |||||||||||||    
T  5916047 tgttggatcattgggggagttcgggg-accgtccacatcgaggctagaacaaccgca 5915992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 6732053 - 6732017
Alignment:
Q  83 ggggatcgtccacatcgaggttagaacaaccgcataa 119  Q
    ||||||| |||||||||||||||||||||||||||||    
T  6732053 ggggatcatccacatcgaggttagaacaaccgcataa 6732017  T

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Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 9620739 - 9620839
Alignment:
Q  143 aaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacaca 242  Q
    ||||| ||||||| ||| ||| ||||||||||| | ||||||     ||||| | |||||||||||| | |||||||||||||| ||| |||||||||||    
T  9620739 aaaatcttaaggcaatgagtttatgggtcctctcacttataaagtgatcaacttctacttttctatctgttgtgagacatataactcacacttgcacaca 9620838  T
Q  243 a 243  Q
    |    
T  9620839 a 9620839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 1513992 - 1514079
Alignment:
Q  157 atgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaat 244  Q
    ||||||| | ||||||||||| ||||||    |||||| |||||| || ||||||||||| || |||||| ||||||||| |||||||    
T  1513992 atgggtttaagggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggatatataactcatacttgtacacaat 1514079  T

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Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 6876947 - 6877026
Alignment:
Q  165 atgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagac-atataagtcatacttgcacacaa 243  Q
    ||||||| ||||||||||||    |||||| ||||||||| ||||||||||| ||| |||||| ||| ||||||||||||    
T  6876947 atgggtcatcttatttataaggtgttcaacctttacttttttatccgatgtgggactatataactcacacttgcacacaa 6877026  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 9309065 - 9308972
Alignment:
Q  152 aggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtg--agacatataagtcatacttgcacacaa 243  Q
    |||| ||||||| ||||||||||||| |||||| |  |||||| |||||| || |||| ||||||   ||||||||| ||| ||||||||||||    
T  9309065 aggcaatgggtttatgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactcacacttgcacacaa 9308972  T

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Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 18645712 - 18645750
Alignment:
Q  205 ctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  18645712 ctatccgatgtgagacatataactcacacttgcacacaa 18645750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 34835319 - 34835221
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataa 226  Q
    |||||| |||||  ||||| |||||||| ||| ||| ||||||||||||| ||||||    |||||| |||||| || |||| |||||| |||||||||    
T  34835319 accacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataa 34835221  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 9309149 - 9309104
Alignment:
Q  73 ggggagttcgggggatcgtccacatcgaggttagaacaaccgcata 118  Q
    |||||| |||||||| |||||||||||||| |||||||||| ||||    
T  9309149 ggggagctcgggggaccgtccacatcgaggctagaacaaccacata 9309104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 9309522 - 9309477
Alignment:
Q  73 ggggagttcgggggatcgtccacatcgaggttagaacaaccgcata 118  Q
    |||||| |||||||| |||||||||||||| |||||||||| ||||    
T  9309522 ggggagctcgggggaccgtccacatcgaggctagaacaaccacata 9309477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 20870621 - 20870718
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatata 225  Q
    |||||| |||||  |||||| |||||||  |||||| ||||||||||||| |||||| |  |||||| |||||| || |||| ||||||  |||||||    
T  20870621 accacactcttatccaaaatcttaaggcagtgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgatgtggaacatata 20870718  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 116
Target Start/End: Original strand, 37544490 - 37544523
Alignment:
Q  83 ggggatcgtccacatcgaggttagaacaaccgca 116  Q
    |||||||||||||||||||| |||||||||||||    
T  37544490 ggggatcgtccacatcgaggctagaacaaccgca 37544523  T

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Target: scaffold0734 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 5866 - 5772
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  5866 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaa 5772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 15773375 - 15773322
Alignment:
Q  60 tgttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaacc 113  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  15773375 tgttggatcatgaggggagttaggaggatcgtccacatcgaggttagaacaacc 15773322  T

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Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 12114610 - 12114725
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||| | ||||||| ||||||||||||| ||||||    |||||| ||||||||||||||||||||| || ||||||     
T  12114610 accacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggatatataac 12114709  T
Q  228 tcatacttgcacacaa 243  Q
    | | ||||||||||||    
T  12114710 ttacacttgcacacaa 12114725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 39914362 - 39914247
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||| |||||||  | |||| ||||||||||||||||||||    |||||| | |||| || |||| ||||||||||||||||     
T  39914362 accacactcttatccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttcaacctctactgttttatctgatgtgagacatataac 39914263  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  39914262 tcacacttgcacacaa 39914247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 243
Target Start/End: Original strand, 49336755 - 49336850
Alignment:
Q  148 tttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| | ||||||| ||||||||||||| ||||||     ||||| ||||||||||||||||||||||||||| ||| ||| ||||| ||||||    
T  49336755 tttaagactatgggtttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgagacatgtaactcacacttgtacacaa 49336850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 37726577 - 37726504
Alignment:
Q  165 atgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    |||| |||||||| ||||||   |||||||||||||| || ||||||||||||||||||||| ||| |||||||    
T  37726577 atggatcctcttacttataaggtattcaacatttactattttatccgatgtgagacatataactcacacttgca 37726504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 32462948 - 32463064
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacattt-acttttctatccgatgtgagacatataa 226  Q
    |||||| ||||| ||||||  ||||||| ||||||| ||| ||| ||||| ||||||   ||||||| ||| ||| |||||||||||||| |||||||||    
T  32462948 accacactcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatataa 32463047  T
Q  227 gtcatacttgcacacaa 243  Q
     ||| ||||| ||||||    
T  32463048 ctcacacttgtacacaa 32463064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 9240259 - 9240144
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    ||||||||||||  | |||| ||||||  |||| || ||||||||||||| ||||||    |||| | ||||||| |||||||||||||  ||||||||     
T  9240259 accacattcttatccgaaatcttaaggtaatggatttatgggtcctcttacttataaggtgttcagcttttacttctctatccgatgtggaacatataac 9240160  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  9240159 tcacacttgcacacaa 9240144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 21832412 - 21832503
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcaca 240  Q
    ||||||| ||| ||| ||| ||||||||| ||||||    |||||| ||||||||||||||| ||||| ||||||||| ||| |||||||||    
T  21832412 ttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactcacacttgcaca 21832503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 37991025 - 37991140
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||||||| ||| || |||||||||| ||||||    |||||| |||||| || ||||| |||||||||||||||     
T  37991025 accacactcttacccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttactattttatccaatgtgagacatataac 37991124  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||| ||||||    
T  37991125 tcacacttgtacacaa 37991140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 41359814 - 41359901
Alignment:
Q  129 ccacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtg 216  Q
    |||||||||||  |||||  ||||||| ||||||| ||||||||||||| ||||||   ||||||| |||||| || |||||||||||    
T  41359814 ccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactattgtatccgatgtg 41359901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 1634391 - 1634477
Alignment:
Q  157 atgggttgatgggtcctcttatttataataaattcaacattt-acttttctatccgatgtgagacatataagtcatacttgcacaca 242  Q
    ||||||| ||||||||||||| |||||||   || ||| ||| | |||||||||||||||| ||||||||| ||| |||||||||||    
T  1634391 atgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataactcacacttgcacaca 1634477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 8327977 - 8327899
Alignment:
Q  165 atgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| |||||| |||||| | ||||| | |||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  8327977 atgggttctcttacttataagatattcatcctttactcttttatccgatgtgggacatataactcacacttgcacacaa 8327899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 22304679 - 22304569
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||| ||| ||||||||||||| ||||||   ||||||| |||||| || ||||||||||| ||||||||      
T  22304679 accacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttactattttatccgatgtgggacatatagc 22304580  T
Q  228 tcatacttgca 238  Q
    ||| |||||||    
T  22304579 tcacacttgca 22304569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 25739510 - 25739588
Alignment:
Q  165 atgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||||||||| |||||  |  |||||| |||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  25739510 atgggtcctcttacttatatgatgttcaacttttactattttatccgatgtgggacatataactcacacttgcacacaa 25739588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 33175773 - 33175827
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| |||||||||||||| |||||||||||||||| ||| ||||| ||||||    
T  33175773 ttcaacctttacttttctatctgatgtgagacatataactcacacttgtacacaa 33175827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 35946611 - 35946517
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| | ||||| ||||||||||||| ||||||    |||||| |||||| || ||||||||||| ||||||||| ||| ||||| ||||||    
T  35946611 ttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgtacacaa 35946517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 7767391 - 7767476
Alignment:
Q  157 atgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacaca 242  Q
    ||||||| ||| ||||||||| ||||||    | |||| ||||||||||||||||||||| ||||||||| ||| |||| ||||||    
T  7767391 atgggtttatgagtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatataactcagacttacacaca 7767476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 15772964 - 15772851
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  |||| || ||| ||| ||||||||||||| ||||||    ||||||||||||| || |||||||| || |||||||||     
T  15772964 accacactcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacatttactcttttatccgatatgggacatataac 15772865  T
Q  228 tcatacttgcacac 241  Q
    ||| ||||||||||    
T  15772864 tcacacttgcacac 15772851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 15773288 - 15773187
Alignment:
Q  142 caaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacac 241  Q
    ||||| |||||||| ||| | | ||| ||||||||| |||||| |  |||||| |||||| || ||| ||||||| ||||||||| ||| ||||||||||    
T  15773288 caaaactttaaggcaatgagcttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggacatataactcacacttgcacac 15773189  T
Q  242 aa 243  Q
    ||    
T  15773188 aa 15773187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 25755568 - 25755519
Alignment:
Q  67 tcataaggggagttcgggggatcgtccacatcgaggttagaacaaccgca 116  Q
    |||| |||||||||||||||| | |||||||||||| |||||||||||||    
T  25755568 tcatgaggggagttcgggggaccatccacatcgaggctagaacaaccgca 25755519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 39336351 - 39336396
Alignment:
Q  202 tttctatccgatgtgagacatataagtcatacttgcacacaatagt 247  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  39336351 tttctatccgatgtgggacatataactcacacttgcacacaatagt 39336396  T

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Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 12747871 - 12747915
Alignment:
Q  199 acttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||||||||||||||| ||||||||| ||| ||||||||||||    
T  12747871 acttttctatccgatgtgggacatataactcacacttgcacacaa 12747915  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 37726664 - 37726625
Alignment:
Q  73 ggggagttcgggggatcgtccacatcgaggttagaacaac 112  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  37726664 ggggagttcgggggaccgtccacatcgaggctagaacaac 37726625  T

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Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 37990687 - 37990802
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||| ||| ||| ||||||||| ||||||    ||||||||||||| || |||||||||||  ||||||||     
T  37990687 accacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataac 37990786  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||| ||||||    
T  37990787 tcacacttgtacacaa 37990802  T

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Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 54017864 - 54017979
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  |||||||| | |||| ||| ||||||||| ||||||    |||||| |||||| || ||||||||||  |||||||||     
T  54017864 accacactcttacccaaaaccttaaggcgttaggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatataac 54017963  T
Q  228 tcatacttgcacacaa 243  Q
    ||| ||||||||||||    
T  54017964 tcacacttgcacacaa 54017979  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 4823765 - 4823655
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||| ||||||| ||| ||| |||||||||| || ||||||    || ||| |||||| || ||||||||||||||| |||||     
T  4823765 accacactcttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtgagacttataac 4823666  T
Q  228 tcatacttgca 238  Q
    ||| |||||||    
T  4823665 tcacacttgca 4823655  T

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Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 25755463 - 25755389
Alignment:
Q  169 gtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||||| ||||||   ||||||| |||||| || |||| |||||||||||||||| ||| ||||| ||||||    
T  25755463 gtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataactcacacttgtacacaa 25755389  T

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Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 29644658 - 29644744
Alignment:
Q  157 atgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| |||||| |||||| ||||||    |||||| |||||| ||  |||||||||| ||||||||| ||| ||||||||||||    
T  29644658 atgggtttatgggttctcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactcacacttgcacacaa 29644744  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 29644979 - 29645065
Alignment:
Q  157 atgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||||||||| ||||||    || ||| |||||| || ||||||||||| ||||||||| | | ||||||||||||    
T  29644979 atgggtttatgggtcctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataacttacacttgcacacaa 29645065  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 33803329 - 33803415
Alignment:
Q  157 atgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||||||||| |||||     |||||| |||||| || ||||||||||| ||||||||| ||| | ||||||||||    
T  33803329 atgggtttatgggtcctcttacttatatggtgttcaacctttactattttatccgatgtgggacatataactcacaattgcacacaa 33803415  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 42342081 - 42342123
Alignment:
Q  74 gggagttcgggggatcgtccacatcgaggttagaacaaccgca 116  Q
    |||||||||| ||| |||||||||||||| |||||||||||||    
T  42342081 gggagttcggaggaccgtccacatcgaggctagaacaaccgca 42342123  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 42342159 - 42342253
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||| ||| ||| ||||||||| ||||||   ||| |||||||||| || |||||||||||  |||||| | ||| ||||||||||||    
T  42342159 ttaaggcaatgagtttatgagtcctcttacttataaggcattgaacatttactcttttatccgatgtggaacatatgaatcacacttgcacacaa 42342253  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 52634764 - 52634671
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||| ||||| ||||||    |||||| |||||| || ||||||||||| ||||||||| ||| ||||| ||||||    
T  52634764 ttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaacctttactgttttatccgatgtgggacatataactcacacttgtacacaa 52634671  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 53577413 - 53577359
Alignment:
Q  189 ttcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    |||||| |||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  53577413 ttcaacctttactgttttatccgatgtgtgacatataactcacacttgcacacaa 53577359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 9239994 - 9239941
Alignment:
Q  60 tgttggatcataaggggagttcgggggatcgtccacatcgaggttagaacaacc 113  Q
    ||||||||||| ||||||| | |||||| |||||||||||||| ||||| ||||    
T  9239994 tgttggatcatgaggggagcttgggggaccgtccacatcgaggctagaaaaacc 9239941  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 51886634 - 51886561
Alignment:
Q  165 atgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgca 238  Q
    ||||||||||||| |||||  |  |||||| |||||| || ||| ||||||||||||||||| ||| |||||||    
T  51886634 atgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataactcacacttgca 51886561  T

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Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 17525 - 17619
Alignment:
Q  149 ttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataagtcatacttgcacacaa 243  Q
    ||||||| ||||||| ||||||||||||| ||| ||    |||||| |||||| || |||| |||||| ||||||||| ||| ||||||||||||    
T  17525 ttaaggctatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacacaa 17619  T

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Target: scaffold0702 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 236
Target Start/End: Original strand, 562 - 670
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||| |||||  |||||  ||||||| ||||||| ||||||||||||| ||||||    |||||| |||||| || || |||||||| |||||||||     
T  562 accacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataac 661  T
Q  228 tcatacttg 236  Q
    ||| |||||    
T  662 tcacacttg 670  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 47470 - 47356
Alignment:
Q  128 accacattcttaatcaaaattttaaggcgatgggttgatgggtcctcttatttataataaattcaacatttacttttctatccgatgtgagacatataag 227  Q
    |||||||| |||  ||||| |||||||| ||||||| |||| | |||||| ||||||    |||||  |||||| || |||| |||||||||||| |||     
T  47470 accacatttttacccaaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaaactttactattttatcggatgtgagacatttaat 47371  T
Q  228 tcatacttgcacaca 242  Q
    ||| |||||||||||    
T  47370 tcacacttgcacaca 47356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 115
Target Start/End: Complemental strand, 47519 - 47486
Alignment:
Q  82 gggggatcgtccacatcgaggttagaacaaccgc 115  Q
    |||||| |||||||||||||||||||||||||||    
T  47519 gggggaccgtccacatcgaggttagaacaaccgc 47486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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