View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1048_low_48 (Length: 309)

Name: NF1048_low_48
Description: NF1048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1048_low_48
NF1048_low_48
[»] chr1 (42 HSPs)
chr1 (52-223)||(1386630-1386801)
chr1 (152-216)||(27226346-27226410)
chr1 (174-216)||(19072379-19072421)
chr1 (174-216)||(19120269-19120311)
chr1 (152-216)||(36605421-36605480)
chr1 (169-216)||(16536378-16536425)
chr1 (169-215)||(1845866-1845912)
chr1 (152-206)||(47292271-47292325)
chr1 (172-215)||(1846561-1846604)
chr1 (169-216)||(18407222-18407269)
chr1 (169-216)||(27930771-27930818)
chr1 (152-215)||(41322217-41322275)
chr1 (173-216)||(42830548-42830591)
chr1 (169-216)||(45737311-45737358)
chr1 (169-216)||(45738006-45738053)
chr1 (172-215)||(52505996-52506039)
chr1 (173-215)||(25813032-25813074)
chr1 (169-215)||(33113119-33113165)
chr1 (169-215)||(41321519-41321565)
chr1 (169-215)||(52505300-52505346)
chr1 (171-216)||(33126193-33126238)
chr1 (180-216)||(1117058-1117094)
chr1 (172-216)||(19071721-19071765)
chr1 (172-216)||(19119611-19119655)
chr1 (169-216)||(17109312-17109358)
chr1 (169-216)||(36604733-36604780)
chr1 (169-216)||(41575180-41575227)
chr1 (169-216)||(42831222-42831269)
chr1 (172-207)||(43319925-43319960)
chr1 (177-216)||(44645275-44645314)
chr1 (169-208)||(47553844-47553883)
chr1 (177-216)||(50143399-50143438)
chr1 (182-216)||(18406549-18406583)
chr1 (169-215)||(25068331-25068377)
chr1 (169-207)||(25069031-25069069)
chr1 (169-223)||(25991401-25991455)
chr1 (169-215)||(38011875-38011921)
chr1 (184-216)||(1114903-1114935)
chr1 (176-216)||(17110037-17110077)
chr1 (172-216)||(45738691-45738735)
chr1 (169-201)||(46682681-46682713)
chr1 (152-208)||(47233054-47233105)
[»] chr6 (38 HSPs)
chr6 (152-215)||(9240848-9240911)
chr6 (170-223)||(34709265-34709318)
chr6 (171-215)||(25528439-25528483)
chr6 (169-216)||(28023567-28023614)
chr6 (169-215)||(9241561-9241607)
chr6 (169-215)||(11522806-11522852)
chr6 (169-215)||(11523499-11523545)
chr6 (169-215)||(14873024-14873070)
chr6 (169-215)||(34280022-34280068)
chr6 (169-215)||(34709939-34709985)
chr6 (174-223)||(22022420-22022469)
chr6 (169-208)||(3751920-3751959)
chr6 (169-208)||(7127686-7127725)
chr6 (169-216)||(12026218-12026265)
chr6 (169-216)||(14313870-14313917)
chr6 (169-215)||(5443712-5443758)
chr6 (169-215)||(12025523-12025569)
chr6 (169-215)||(12033139-12033185)
chr6 (169-215)||(14873719-14873765)
chr6 (169-215)||(25527736-25527782)
chr6 (151-208)||(5442999-5443056)
chr6 (169-217)||(33950232-33950280)
chr6 (169-216)||(17307212-17307259)
chr6 (169-215)||(188455-188501)
chr6 (173-215)||(3767768-3767810)
chr6 (174-216)||(10702282-10702324)
chr6 (150-208)||(12766939-12766992)
chr6 (152-202)||(22342087-22342137)
chr6 (169-215)||(25577223-25577269)
chr6 (177-215)||(27923771-27923809)
chr6 (173-202)||(31882544-31882573)
chr6 (180-216)||(2092358-2092394)
chr6 (169-201)||(2523373-2523405)
chr6 (172-216)||(4100524-4100568)
chr6 (169-201)||(12693852-12693884)
chr6 (172-216)||(30461450-30461494)
chr6 (172-208)||(31881850-31881886)
chr6 (169-205)||(32131938-32131974)
[»] chr3 (54 HSPs)
chr3 (151-208)||(14600368-14600425)
chr3 (169-223)||(5984922-5984976)
chr3 (169-215)||(23309641-23309687)
chr3 (169-215)||(37183087-37183133)
chr3 (171-216)||(45241212-45241257)
chr3 (152-216)||(41587331-41587395)
chr3 (152-216)||(44950301-44950365)
chr3 (169-216)||(1262406-1262453)
chr3 (169-216)||(11345379-11345426)
chr3 (169-216)||(18364639-18364686)
chr3 (169-216)||(18365301-18365348)
chr3 (169-216)||(27255994-27256041)
chr3 (169-216)||(30605366-30605413)
chr3 (176-223)||(44499376-44499423)
chr3 (170-216)||(1263079-1263125)
chr3 (169-215)||(10887719-10887765)
chr3 (169-215)||(22130418-22130464)
chr3 (151-216)||(40974032-40974092)
chr3 (152-216)||(1764313-1764377)
chr3 (169-216)||(3090438-3090485)
chr3 (169-208)||(13625933-13625972)
chr3 (169-208)||(14601429-14601468)
chr3 (169-215)||(4558041-4558087)
chr3 (169-215)||(4558760-4558806)
chr3 (169-215)||(4757004-4757050)
chr3 (169-215)||(10888425-10888471)
chr3 (149-215)||(11056581-11056642)
chr3 (169-215)||(14602131-14602177)
chr3 (169-215)||(23308945-23308991)
chr3 (169-215)||(24543003-24543049)
chr3 (174-216)||(49765149-49765191)
chr3 (174-216)||(54403573-54403615)
chr3 (169-205)||(7725437-7725473)
chr3 (152-216)||(44500063-44500122)
chr3 (152-216)||(47794672-47794731)
chr3 (172-216)||(49764502-49764546)
chr3 (169-216)||(11344700-11344747)
chr3 (169-208)||(11414508-11414547)
chr3 (169-216)||(27255294-27255341)
chr3 (169-216)||(40927502-40927549)
chr3 (169-208)||(41865712-41865751)
chr3 (169-216)||(44951006-44951053)
chr3 (169-216)||(47793992-47794039)
chr3 (169-208)||(48842050-48842089)
chr3 (171-205)||(4758150-4758184)
chr3 (174-216)||(13623189-13623231)
chr3 (170-216)||(19547050-19547096)
chr3 (170-216)||(40974718-40974764)
chr3 (152-201)||(5398038-5398087)
chr3 (151-216)||(54606444-54606504)
chr3 (172-216)||(20030598-20030642)
chr3 (172-216)||(32255745-32255789)
chr3 (152-216)||(40036416-40036475)
chr3 (152-216)||(49080629-49080688)
[»] chr7 (40 HSPs)
chr7 (152-216)||(27619654-27619718)
chr7 (152-216)||(2935781-2935845)
chr7 (169-216)||(11639903-11639950)
chr7 (169-215)||(317285-317331)
chr7 (169-215)||(317979-318025)
chr7 (169-215)||(6185354-6185400)
chr7 (169-215)||(6191870-6191916)
chr7 (169-215)||(25606931-25606977)
chr7 (169-215)||(29824051-29824097)
chr7 (170-216)||(38790080-38790126)
chr7 (170-215)||(29823338-29823383)
chr7 (151-215)||(2790074-2790133)
chr7 (179-223)||(13067804-13067848)
chr7 (172-215)||(25266-25309)
chr7 (169-208)||(6184659-6184698)
chr7 (169-216)||(8122634-8122681)
chr7 (169-208)||(8535462-8535501)
chr7 (169-216)||(27144188-27144235)
chr7 (149-216)||(38790761-38790823)
chr7 (177-216)||(42813599-42813638)
chr7 (169-216)||(46011140-46011187)
chr7 (169-215)||(25968-26014)
chr7 (169-215)||(2146043-2146089)
chr7 (169-215)||(2146896-2146942)
chr7 (169-215)||(38670705-38670751)
chr7 (151-216)||(29736120-29736185)
chr7 (172-216)||(5951661-5951705)
chr7 (172-216)||(19435316-19435360)
chr7 (152-216)||(40401572-40401631)
chr7 (172-216)||(45941462-45941506)
chr7 (172-216)||(48981883-48981927)
chr7 (169-216)||(16425344-16425391)
chr7 (169-216)||(36688880-36688927)
chr7 (177-215)||(25607633-25607671)
chr7 (173-215)||(40343769-40343811)
chr7 (171-208)||(11641008-11641045)
chr7 (170-202)||(20261647-20261679)
chr7 (172-216)||(29615526-29615570)
chr7 (172-216)||(34999195-34999239)
chr7 (169-208)||(39186255-39186295)
[»] chr4 (73 HSPs)
chr4 (152-215)||(13395179-13395242)
chr4 (152-216)||(754858-754922)
chr4 (169-215)||(616153-616199)
chr4 (169-215)||(7165403-7165449)
chr4 (169-215)||(7166100-7166146)
chr4 (169-215)||(8193012-8193058)
chr4 (169-215)||(10156000-10156046)
chr4 (169-215)||(13392773-13392819)
chr4 (169-215)||(13395912-13395958)
chr4 (169-215)||(47029824-47029870)
chr4 (172-216)||(721332-721376)
chr4 (172-216)||(23722072-23722116)
chr4 (169-216)||(6232357-6232404)
chr4 (169-208)||(10155510-10155549)
chr4 (169-216)||(20545039-20545086)
chr4 (169-216)||(26705690-26705737)
chr4 (169-216)||(35667304-35667351)
chr4 (169-216)||(55068850-55068897)
chr4 (169-215)||(796390-796436)
chr4 (169-215)||(6233125-6233171)
chr4 (169-215)||(12250681-12250727)
chr4 (169-215)||(23171126-23171172)
chr4 (169-215)||(23269175-23269221)
chr4 (170-216)||(33047250-33047296)
chr4 (169-215)||(47030504-47030550)
chr4 (171-216)||(28464210-28464255)
chr4 (170-215)||(46095414-46095459)
chr4 (151-216)||(48372409-48372469)
chr4 (172-216)||(755547-755591)
chr4 (184-216)||(4949956-4949988)
chr4 (172-216)||(13482193-13482237)
chr4 (172-208)||(19314042-19314078)
chr4 (176-216)||(35667777-35667817)
chr4 (152-208)||(37423138-37423189)
chr4 (152-215)||(615429-615487)
chr4 (169-216)||(722000-722047)
chr4 (169-208)||(6232326-6232365)
chr4 (152-207)||(6232416-6232466)
chr4 (173-204)||(6233819-6233850)
chr4 (173-212)||(7478683-7478722)
chr4 (169-208)||(7797642-7797681)
chr4 (169-216)||(16192336-16192383)
chr4 (169-216)||(17722757-17722804)
chr4 (169-216)||(19313352-19313399)
chr4 (152-207)||(26809076-26809126)
chr4 (169-216)||(35667402-35667449)
chr4 (169-216)||(35667587-35667634)
chr4 (177-216)||(38720640-38720679)
chr4 (169-216)||(41919929-41919976)
chr4 (169-207)||(4950625-4950663)
chr4 (193-223)||(16191712-16191742)
chr4 (169-207)||(17730210-17730248)
chr4 (177-215)||(23308813-23308851)
chr4 (150-200)||(23721373-23721418)
chr4 (169-207)||(33032845-33032883)
chr4 (169-207)||(36422118-36422156)
chr4 (169-207)||(36898129-36898167)
chr4 (169-215)||(46096141-46096187)
chr4 (169-215)||(46138642-46138688)
chr4 (169-223)||(54145023-54145077)
chr4 (178-216)||(56310087-56310125)
chr4 (169-214)||(6711239-6711284)
chr4 (178-215)||(23309500-23309537)
chr4 (171-216)||(25010078-25010123)
chr4 (171-216)||(35665961-35666006)
chr4 (150-215)||(53306368-53306428)
chr4 (174-215)||(55815019-55815060)
chr4 (169-201)||(13771725-13771757)
chr4 (172-216)||(18362718-18362762)
chr4 (180-216)||(30192527-30192563)
chr4 (172-216)||(36600164-36600208)
chr4 (169-213)||(37709590-37709634)
chr4 (172-216)||(45847145-45847189)
[»] chr5 (43 HSPs)
chr5 (155-223)||(16614156-16614220)
chr5 (168-217)||(36762120-36762169)
chr5 (172-216)||(1932042-1932086)
chr5 (152-216)||(27028661-27028725)
chr5 (169-215)||(9119569-9119615)
chr5 (169-215)||(20691121-20691167)
chr5 (169-215)||(37333910-37333956)
chr5 (169-215)||(37657388-37657434)
chr5 (152-201)||(17781183-17781232)
chr5 (152-216)||(19408534-19408593)
chr5 (169-216)||(13280167-13280214)
chr5 (169-216)||(20570135-20570182)
chr5 (172-215)||(24624827-24624870)
chr5 (173-216)||(27979242-27979285)
chr5 (169-216)||(27979920-27979967)
chr5 (169-216)||(31476985-31477032)
chr5 (169-216)||(32020471-32020518)
chr5 (169-216)||(35751523-35751570)
chr5 (169-216)||(36737469-36737516)
chr5 (169-215)||(1199766-1199812)
chr5 (150-216)||(8572692-8572753)
chr5 (169-215)||(9118842-9118888)
chr5 (169-215)||(24625516-24625562)
chr5 (170-215)||(37658096-37658141)
chr5 (172-216)||(6029464-6029508)
chr5 (172-216)||(10688280-10688324)
chr5 (172-216)||(20184034-20184078)
chr5 (169-216)||(6047992-6048039)
chr5 (169-216)||(18524384-18524431)
chr5 (173-216)||(22730416-22730459)
chr5 (169-208)||(22731088-22731127)
chr5 (150-216)||(3933999-3934060)
chr5 (169-207)||(4054738-4054776)
chr5 (169-215)||(4055430-4055476)
chr5 (169-215)||(20541003-20541049)
chr5 (169-215)||(20691819-20691865)
chr5 (170-216)||(42599008-42599054)
chr5 (149-202)||(31850694-31850742)
chr5 (172-216)||(5138309-5138353)
chr5 (169-201)||(6031384-6031416)
chr5 (152-216)||(14594064-14594123)
chr5 (152-204)||(17781077-17781124)
chr5 (172-208)||(31601572-31601608)
[»] chr2 (44 HSPs)
chr2 (169-216)||(34173734-34173781)
chr2 (169-216)||(37199620-37199667)
chr2 (169-215)||(11796831-11796877)
chr2 (169-215)||(34248084-34248130)
chr2 (170-215)||(16111188-16111233)
chr2 (174-223)||(44332528-44332577)
chr2 (172-216)||(1366433-1366477)
chr2 (172-216)||(3515493-3515537)
chr2 (171-215)||(20894302-20894346)
chr2 (172-216)||(38910684-38910728)
chr2 (169-216)||(5475154-5475201)
chr2 (172-223)||(6078016-6078067)
chr2 (173-216)||(12414310-12414353)
chr2 (173-216)||(12426370-12426413)
chr2 (169-208)||(17829717-17829756)
chr2 (169-216)||(33146041-33146088)
chr2 (169-208)||(34247389-34247428)
chr2 (169-207)||(551837-551875)
chr2 (169-215)||(35899144-35899190)
chr2 (169-215)||(38973166-38973212)
chr2 (169-215)||(39160303-39160349)
chr2 (169-215)||(39208845-39208891)
chr2 (170-216)||(40769390-40769436)
chr2 (172-216)||(17829060-17829104)
chr2 (172-216)||(34173055-34173099)
chr2 (172-216)||(37009004-37009048)
chr2 (173-216)||(1534669-1534712)
chr2 (169-216)||(6229905-6229952)
chr2 (169-216)||(11051565-11051612)
chr2 (169-216)||(11796146-11796193)
chr2 (169-216)||(22606322-22606369)
chr2 (169-216)||(28167546-28167593)
chr2 (169-216)||(31597231-31597278)
chr2 (176-223)||(32023772-32023819)
chr2 (169-216)||(35954015-35954062)
chr2 (172-207)||(37198938-37198973)
chr2 (169-208)||(43657621-43657660)
chr2 (169-223)||(22297621-22297675)
chr2 (174-216)||(22607003-22607045)
chr2 (170-215)||(16110488-16110533)
chr2 (180-216)||(4437999-4438035)
chr2 (172-208)||(7940022-7940058)
chr2 (152-216)||(11563791-11563850)
chr2 (180-216)||(15007121-15007157)
[»] scaffold0115 (1 HSPs)
scaffold0115 (169-223)||(32718-32772)
[»] chr8 (45 HSPs)
chr8 (169-215)||(25597782-25597828)
chr8 (152-215)||(14363766-14363830)
chr8 (169-216)||(3075315-3075362)
chr8 (169-216)||(11141082-11141129)
chr8 (153-208)||(14364490-14364545)
chr8 (169-216)||(14879529-14879576)
chr8 (169-215)||(6293219-6293265)
chr8 (169-215)||(22934298-22934344)
chr8 (169-214)||(10216158-10216203)
chr8 (169-208)||(11759397-11759436)
chr8 (169-216)||(14880209-14880256)
chr8 (169-216)||(17564677-17564724)
chr8 (169-216)||(36016780-36016827)
chr8 (169-215)||(6292523-6292569)
chr8 (169-215)||(39998379-39998425)
chr8 (169-205)||(253535-253571)
chr8 (169-205)||(662287-662323)
chr8 (169-205)||(848085-848121)
chr8 (172-216)||(3075144-3075188)
chr8 (168-216)||(11760088-11760136)
chr8 (180-216)||(37872290-37872326)
chr8 (169-216)||(8437906-8437953)
chr8 (169-216)||(14094171-14094218)
chr8 (180-215)||(25485448-25485483)
chr8 (175-214)||(33969582-33969621)
chr8 (169-216)||(44284371-44284418)
chr8 (174-216)||(4855955-4855997)
chr8 (169-215)||(22935996-22936042)
chr8 (169-215)||(25598479-25598525)
chr8 (177-215)||(29636408-29636446)
chr8 (169-207)||(29726422-29726460)
chr8 (170-216)||(32904666-32904712)
chr8 (169-207)||(34364608-34364646)
chr8 (183-217)||(35366335-35366369)
chr8 (170-216)||(40791776-40791822)
chr8 (179-216)||(5551572-5551609)
chr8 (169-206)||(13439398-13439435)
chr8 (169-202)||(24810290-24810323)
chr8 (175-216)||(32904240-32904281)
chr8 (175-216)||(40791061-40791102)
chr8 (168-216)||(8442664-8442712)
chr8 (176-204)||(17496958-17496986)
chr8 (169-205)||(25954135-25954171)
chr8 (172-212)||(30354557-30354597)
chr8 (152-216)||(41312401-41312460)
[»] scaffold0340 (1 HSPs)
scaffold0340 (169-216)||(12880-12927)
[»] scaffold0003 (3 HSPs)
scaffold0003 (169-216)||(421154-421201)
scaffold0003 (171-216)||(421950-421995)
scaffold0003 (169-216)||(14056-14103)
[»] scaffold0105 (2 HSPs)
scaffold0105 (169-215)||(19668-19714)
scaffold0105 (169-208)||(19073-19112)
[»] scaffold0368 (2 HSPs)
scaffold0368 (173-216)||(10604-10647)
scaffold0368 (169-216)||(11278-11325)
[»] scaffold2113 (1 HSPs)
scaffold2113 (169-215)||(733-779)
[»] scaffold0098 (1 HSPs)
scaffold0098 (169-215)||(34336-34382)
[»] scaffold0067 (1 HSPs)
scaffold0067 (169-215)||(18764-18810)
[»] scaffold0533 (1 HSPs)
scaffold0533 (169-222)||(10125-10178)
[»] scaffold0289 (2 HSPs)
scaffold0289 (172-208)||(4076-4112)
scaffold0289 (169-216)||(3415-3462)
[»] scaffold1192 (1 HSPs)
scaffold1192 (169-216)||(167-214)
[»] scaffold0695 (1 HSPs)
scaffold0695 (169-216)||(2230-2277)
[»] scaffold0201 (1 HSPs)
scaffold0201 (169-204)||(15361-15396)
[»] scaffold0102 (2 HSPs)
scaffold0102 (169-216)||(27023-27070)
scaffold0102 (151-216)||(26347-26407)
[»] scaffold0460 (2 HSPs)
scaffold0460 (169-215)||(13463-13509)
scaffold0460 (174-215)||(13573-13614)
[»] scaffold0051 (1 HSPs)
scaffold0051 (152-216)||(11650-11709)


Alignment Details
Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 1386801 - 1386630
Alignment:
Q  52 aattgccaaggcttttataaaaatataagagatatgagccgtagcttcacactatatataatgagaatattgatgggactagggtttgttattattgaat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  1386801 aattgccaaggcttttataaaaatataagagatatgagccgtagctgcacactatatataatgagaatattgatgggactagggtttgttattattatat 1386702  T
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    ||||||||||||||  ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  1386701 gagtaaattacacttctctcccctcccttcaaagatgcttgaattacactcccctcccctcttattcaaaac 1386630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 27226410 - 27226346
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  27226410 gagtaaattacactcctctcccctcccctcaaaaatgtttgaattacactcccctctcctcttat 27226346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 19072421 - 19072379
Alignment:
Q  174 ctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19072421 ctcccctcaaagatgtttgaattacactcccctcctctcttat 19072379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 19120311 - 19120269
Alignment:
Q  174 ctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19120311 ctcccctcaaagatgtttgaattacactcccctcctctcttat 19120269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 36605480 - 36605421
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||     |||||||||||||||||||||||||||||||||||| |||||||    
T  36605480 gagtaaattacactct-----cctcccctcaaagatgtttgaattacactcccctcccctcttat 36605421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 16536378 - 16536425
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  16536378 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttat 16536425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 1845866 - 1845912
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  1845866 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 1845912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 47292325 - 47292271
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccct 206  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||| ||||||    
T  47292325 gagtaaattacactcccctcccctcccctcaaagatgcttgaattacattcccct 47292271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 1846604 - 1846561
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||    
T  1846604 ccctcccctcaaagatgcttgaattacactcccctcccctctta 1846561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 18407269 - 18407222
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  18407269 ctcccctccccttaaagatgtttgaattacactctcctcccctcttat 18407222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 27930771 - 27930818
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  27930771 ctcccctcctctcaaagatgcttgaattacactcccctcccctcttat 27930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 41322275 - 41322217
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||     |||||||||||||||| ||||||||||||||||||| ||||||    
T  41322275 gagtaaattacactct-----cctcccctcaaagatgcttgaattacactcccctcccctctta 41322217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 42830548 - 42830591
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  42830548 cctcccctcaaagatgtttgaattacactccccgcccctcttat 42830591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 45737311 - 45737358
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  45737311 ctcctctcccctcaaagatgcttgaattacactcccctcccctcttat 45737358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 45738006 - 45738053
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||| ||||| |||||||    
T  45738006 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttat 45738053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 52506039 - 52505996
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||    
T  52506039 ccctcccctcaaagatgcttgaattacactcccctcccctctta 52505996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 25813032 - 25813074
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||| ||||||||||||||||||| ||||||    
T  25813032 cctcccctcaaagatgcttgaattacactcccctcccctctta 25813074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 33113119 - 33113165
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  33113119 ctccccacccctcaaaaatgtttgaattacactcccctcccctctta 33113165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 41321519 - 41321565
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  41321519 ctcccctcccctcaaagatgcttgaattacactctcctcccctctta 41321565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 52505300 - 52505346
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  52505300 ctcccctcccctcaaagatgcttgaattacacccccctcccctctta 52505346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 33126193 - 33126238
Alignment:
Q  171 cccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||||    
T  33126193 cccctctcctcaaagatgtttgaattacattcccctcttctcttat 33126238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 1117094 - 1117058
Alignment:
Q  180 tcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1117094 tcaaagatgtttaaattacactcccctcctctcttat 1117058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 19071721 - 19071765
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| |||||||||||||||||||||||||| ||||| |||||||    
T  19071721 cccttccctcaaagatgtttgaattacactctcctcccctcttat 19071765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 19119611 - 19119655
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| |||||||||||||||||||||||||| ||||| |||||||    
T  19119611 cccttccctcaaagatgtttgaattacactctcctcccctcttat 19119655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 17109312 - 17109358
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||    
T  17109312 ctcccctcccctcaaagatatttgaattacactcctct-ctctcttat 17109358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 36604733 - 36604780
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| |||||||||||||| || | |||||||    
T  36604733 ctcccctcccctcaaagatgcttgaattacactcctcttccctcttat 36604780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 41575180 - 41575227
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| |||||||||||||| || | |||||||    
T  41575180 ctcccctcccctcaaagatgcttgaattacactcctcttccctcttat 41575227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 42831269 - 42831222
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||| ||||||  ||||||||||||||||||| |||||||    
T  42831269 ctcccctccccttaaagatacttgaattacactcccctccgctcttat 42831222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 43319925 - 43319960
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctc 207  Q
    ||||| ||||||||||||||||||||||||||||||    
T  43319925 ccctctcctcaaagatgtttgaattacactcccctc 43319960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 44645275 - 44645314
Alignment:
Q  177 ccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  44645275 ccctcaaagatgtttgaattacactctcatcctctcttat 44645314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 47553883 - 47553844
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  47553883 ctcccctccccttaaagatgtttgaattacacttccctcc 47553844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 50143399 - 50143438
Alignment:
Q  177 ccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||| ||||||||||||||||||||||||| |||||||    
T  50143399 ccctcagagatgtttgaattacactcccctcccctcttat 50143438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 18406549 - 18406583
Alignment:
Q  182 aaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||| |||||||||||||||||||||||||||    
T  18406549 aaagatgcttgaattacactcccctcctctcttat 18406583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 25068331 - 25068377
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||| ||||||||||||| ||||||||||||| ||||| ||||||    
T  25068331 ctccccacccctcaaagatgcttgaattacactctcctcccctctta 25068377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 25069069 - 25069031
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctc 207  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  25069069 ctcccctcccctcaaagatgcatgaattacactcccctc 25069031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 25991455 - 25991401
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    ||||||||||||||||| || |||||||| | | |||||| ||||||||||||||    
T  25991455 ctcccctcccctcaaagttgcttgaattatatttccctcccctcttattcaaaac 25991401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 38011921 - 38011875
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||| |||| ||||||| ||||||||||||||||||| ||||||    
T  38011921 ctccccttcccttaaagatgcttgaattacactcccctccactctta 38011875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 1114935 - 1114903
Alignment:
Q  184 agatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||||||||| |||||||    
T  1114935 agatgtttgaattacactcccctcccctcttat 1114903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 17110077 - 17110037
Alignment:
Q  176 cccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||| |||||||||||| |||||| |||||||    
T  17110077 cccctcaaagatgcttgaattacactaccctcccctcttat 17110037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 45738735 - 45738691
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||| ||||||||| |||||||||||||| |||| |||||||    
T  45738735 ccctcccatcaaagatgcttgaattacactcctctcccctcttat 45738691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 46682681 - 46682713
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacact 201  Q
    ||||||| |||||||||||||||||||||||||    
T  46682681 ctccccttccctcaaagatgtttgaattacact 46682713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 47233054 - 47233105
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    ||||||||||||||||     |||||||||||||||  |||||||||||||||||||    
T  47233054 gagtaaattacactct-----cctcccctcaaagatacttgaattacactcccctcc 47233105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 8e-21; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 9240848 - 9240911
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||    
T  9240848 gagtaaattacactcccctcccctcccctcaaagatgtttgaattacactcccctcccctctta 9240911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 34709265 - 34709318
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  34709265 tcccctcccctcaaagatgcttgaattacactcccctcccctcttattcaaaac 34709318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 25528483 - 25528439
Alignment:
Q  171 cccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  25528483 cccctcccctcaaagatgcttgaattacactcccctcctctctta 25528439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 28023567 - 28023614
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||    
T  28023567 ctcccctcccttcaaagatgtttgaattacactcccctcccctcttat 28023614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 9241607 - 9241561
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  9241607 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 9241561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 11522806 - 11522852
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  11522806 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 11522852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 11523545 - 11523499
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  11523545 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 11523499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 14873024 - 14873070
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  14873024 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 14873070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 34280022 - 34280068
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  34280022 ctcccctcccttcaaagatgtttgaattacactcccctcccctctta 34280068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 34709985 - 34709939
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  34709985 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 34709939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 22022469 - 22022420
Alignment:
Q  174 ctcccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    ||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  22022469 ctcccctcaaagatgcttgaattacactcccctcccctcttactcaaaac 22022420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 3751920 - 3751959
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  3751920 ctcccctcccctcaaagatgtttgaattacactctcctcc 3751959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 7127725 - 7127686
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  7127725 ctcccctcccctcaaagatgcttgaattacactcccctcc 7127686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 12026265 - 12026218
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  12026265 ctcccctcctctcaaagatgcttgaattacactcccctcccctcttat 12026218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 14313917 - 14313870
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||||    
T  14313917 ctcccatcccctcaaagatgcttgaattacactcccctcccctcttat 14313870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 5443758 - 5443712
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||| | ||||||    
T  5443758 ctcccctcccctcaaagatgcttgaattacactccccttccctctta 5443712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 12025523 - 12025569
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||| | ||||||    
T  12025523 ctcccctcccctcaaagatgcttgaattacactccccttccctctta 12025569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 12033185 - 12033139
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  12033185 ctcccctccgctcaaagatgcttgaattacactcccctcccctctta 12033139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 14873765 - 14873719
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  14873765 ctcccatcccctcaaagatgcttgaattacactcccctcccctctta 14873719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 25527736 - 25527782
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  25527736 ctcccctcccctcaaagatgcttgaattacactctcctcccctctta 25527782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 5442999 - 5443056
Alignment:
Q  151 tgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||| |||||  |||||||||||||||||||  |||||||||||| ||||||    
T  5442999 tgagtaaatttcactcccctcccctcccctcaaagatacttgaattacacttccctcc 5443056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 33950232 - 33950280
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttatt 217  Q
    |||||||||||||||||||| |||||| |||||| ||||| ||||||||    
T  33950232 ctcccctcccctcaaagatgcttgaatcacactctcctcccctcttatt 33950280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 17307212 - 17307259
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||||||| ||||||||||| || | |||||||    
T  17307212 ctcccctcccctcaaagatgtttaaattacactcctcttccctcttat 17307259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 188501 - 188455
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||| | ||||||| ||||||||||||||||||| ||||||    
T  188501 ctcccctccctttaaagatgcttgaattacactcccctcccctctta 188455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 3767810 - 3767768
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||||||||||||||||  |||| ||||||    
T  3767810 cctcccctcaaagatgtttgaattacactcatctcccctctta 3767768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 10702282 - 10702324
Alignment:
Q  174 ctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||| |||||||||||| |||||| |||||||    
T  10702282 ctcccctcaaagatgcttgaattacacttccctcccctcttat 10702324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 12766939 - 12766992
Alignment:
Q  150 atgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    ||||||||||||||||||     |||||||| ||||||| |||||||||||||||||||    
T  12766939 atgagtaaattacactct-----cctccccttaaagatgcttgaattacactcccctcc 12766992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 22342087 - 22342137
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactc 202  Q
    ||||||||||||||   |||||||||||||||| ||| |||||||||||||    
T  22342087 gagtaaattacacttccctcccctcccctcaaatatgcttgaattacactc 22342137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 25577269 - 25577223
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||| | ||||||||||||||| ||| ||||||    
T  25577269 ctcccctcccctcaaagaagcttgaattacactcccatcccctctta 25577223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 27923809 - 27923771
Alignment:
Q  177 ccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  27923809 ccctcaaagatgcttgaattacactcccctcccctctta 27923771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 202
Target Start/End: Complemental strand, 31882573 - 31882544
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactc 202  Q
    ||||||||||||||||||||||||||||||    
T  31882573 cctcccctcaaagatgtttgaattacactc 31882544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 2092394 - 2092358
Alignment:
Q  180 tcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  2092394 tcaaatatgtttgaattacactcccctcccctcttat 2092358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 2523405 - 2523373
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacact 201  Q
    |||||||||||||||||||| ||||||||||||    
T  2523405 ctcccctcccctcaaagatgcttgaattacact 2523373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 4100524 - 4100568
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||| |||||||||| || |||||||||||||||| |||||||    
T  4100524 ccctcctctcaaagatgcttaaattacactcccctcccctcttat 4100568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 12693852 - 12693884
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacact 201  Q
    |||||||||||||||||||| ||||||||||||    
T  12693852 ctcccctcccctcaaagatgcttgaattacact 12693884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 30461450 - 30461494
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| |||| ||||||| |||||| |||||||    
T  30461450 ccctcccctcaaagatgcttgatttacacttccctcccctcttat 30461494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 31881850 - 31881886
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  31881850 ccctcccttcaaagatgcttgaattacactcccctcc 31881886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 32131974 - 32131938
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccc 205  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  32131974 ctcccttcccctcaaagatgcttgaattacactcccc 32131938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 14600368 - 14600425
Alignment:
Q  151 tgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  14600368 tgagtaaattacactctcctcccctcccctcaaagatgcttgaattacactcccctcc 14600425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 5984976 - 5984922
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    |||||||||||||||||||| ||||||||||||||||||| || |||||||||||    
T  5984976 ctcccctcccctcaaagatgcttgaattacactcccctcccctattattcaaaac 5984922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 23309687 - 23309641
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  23309687 ctcccctcccctcaaagatgcttgaattacactcccctcctctctta 23309641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 37183087 - 37183133
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  37183087 ctcccctcccctcaaagatgtttgaattacactcccctcccctctta 37183133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 45241212 - 45241257
Alignment:
Q  171 cccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  45241212 cccctcccctcaaagatgcttgaattacactcccctcctctcttat 45241257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 41587395 - 41587331
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||| ||||||||| |||||||||  |||||||||||||| |||| |||||||    
T  41587395 gagtaaattacactctcctcccctcctctcaaagatacttgaattacactcctctcccctcttat 41587331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 44950301 - 44950365
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||  |||||||||||||||||||| || ||||||| | ||||||||||||||    
T  44950301 gagtaaattacactcccctcccctcccctcaaagatgcttcaattacaattccctcctctcttat 44950365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 1262406 - 1262453
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  1262406 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttat 1262453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 11345426 - 11345379
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  11345426 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttat 11345379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 18364639 - 18364686
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18364639 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttat 18364686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 18365348 - 18365301
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18365348 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttat 18365301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 27256041 - 27255994
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  27256041 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttat 27255994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 30605413 - 30605366
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  30605413 ctccccttccctcaaagatgtttgaattacactcccctccactcttat 30605366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 44499376 - 44499423
Alignment:
Q  176 cccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  44499376 cccctcaaagatgtttgaattacacttccctcccctcttattcaaaac 44499423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 1263125 - 1263079
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  1263125 tcccctcccctcaaagatgcttgaattacactcccctcccctcttat 1263079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 10887719 - 10887765
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  10887719 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 10887765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 22130464 - 22130418
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  22130464 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 22130418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 40974032 - 40974092
Alignment:
Q  151 tgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||     ||||||||| |||||||||||||||||||||||||| |||||||    
T  40974032 tgagtaaattacactct-----cctcccctctaagatgtttgaattacactcccctcccctcttat 40974092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 1764377 - 1764313
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||  ||||| | |||||||||||| || |||||||||||| |||||||||||    
T  1764377 gagtaaattacactcccctccctttccctcaaagatgcttaaattacactcccatcctctcttat 1764313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 3090485 - 3090438
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  3090485 ctcccctcccctcaaagatgcttgaattgcactcccctcccctcttat 3090438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 13625972 - 13625933
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  13625972 ctcccctcccctcaaagatgcttgaattacactcccctcc 13625933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 14601429 - 14601468
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  14601429 ctcccctcccctcaaagatgtttgaattatactcccctcc 14601468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 4558041 - 4558087
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  4558041 ctcccctccccttaaagatgcttgaattacactcccctcccctctta 4558087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 4558806 - 4558760
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||    
T  4558806 ctcccctcccctcaaagatgcttgaattatactcccctcccctctta 4558760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 4757004 - 4757050
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  4757004 ctcctctcccctcaaagatgtttgaattacactctcctcccctctta 4757050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 10888471 - 10888425
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||    
T  10888471 ctcccctcccctcaaagatgcttaaattacactcccctcccctctta 10888425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 11056642 - 11056581
Alignment:
Q  149 aatgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||     |||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  11056642 aatgagtaaattaca-----ctcccctccccttaaagatgcttgaattacactcccctcccctctta 11056581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 14602177 - 14602131
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  14602177 ctcccctcccctcaaagatgcttgaattacacttccctcccctctta 14602131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 23308945 - 23308991
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  23308945 ctcccctccccttaaagatgcttgaattacactcccctcccctctta 23308991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 24543049 - 24543003
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||    
T  24543049 ctcccctcccttcaaagatgcttgagttacactcccctcctctctta 24543003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 49765191 - 49765149
Alignment:
Q  174 ctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  49765191 ctccccgcaaagatgtttgaattacactcccctcccctcttat 49765149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 54403573 - 54403615
Alignment:
Q  174 ctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||| ||||||||||||||||||| |||||||    
T  54403573 ctcccctcaaagatgcttgaattacactcccctcccctcttat 54403615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 7725473 - 7725437
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccc 205  Q
    |||||||||||||||||||| ||||||||||||||||    
T  7725473 ctcccctcccctcaaagatgcttgaattacactcccc 7725437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 44500122 - 44500063
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||     ||| |||||||||||| ||||||||||||||||||| |||||||    
T  44500122 gagtaaattacactct-----ccttccctcaaagatgcttgaattacactcccctcccctcttat 44500063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 47794731 - 47794672
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||     |||||||| ||||||||||||||||||||||||||  |||||||    
T  47794731 gagtaaattacactct-----cctccccttaaagatgtttgaattacactcccctctcctcttat 47794672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 49764502 - 49764546
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||    
T  49764502 ccctcccctcaaagatgcttgaattacacttccctcccctcttat 49764546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 11344700 - 11344747
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| ||||||||  ||||||||||||||||||| |||||||    
T  11344700 ctcccctcccgtcaaagatacttgaattacactcccctcccctcttat 11344747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 11414547 - 11414508
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  11414547 ctcccatcccctcaaagatgcttgaattacactcccctcc 11414508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 27255294 - 27255341
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| ||||||||| ||||||||||||| ||||| |||||||    
T  27255294 ctcccctcccttcaaagatgcttgaattacactctcctcccctcttat 27255341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 40927502 - 40927549
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||| |||||| |||||||||||| |||||| |||||||    
T  40927502 ctcccctcccctctaagatgcttgaattacacttccctcccctcttat 40927549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 41865751 - 41865712
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  41865751 ctcccctcccctcaaagatacttgaattacactcccctcc 41865712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 44951053 - 44951006
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||| ||||||||||||||||| ||||||| ||||| |||||||    
T  44951053 ctcccctctcctcaaagatgtttgaaatacactcacctcccctcttat 44951006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 47793992 - 47794039
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| ||||||||||||||| ||||||||||||||||||  |||||||    
T  47793992 ctcctctcccctcaaagatgcttgaattacactcccctcacctcttat 47794039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 48842089 - 48842050
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  48842089 ctcccctccccttaaagatgattgaattacactcccctcc 48842050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 205
Target Start/End: Complemental strand, 4758184 - 4758150
Alignment:
Q  171 cccctcccctcaaagatgtttgaattacactcccc 205  Q
    |||||||||||||| ||||||||||||||||||||    
T  4758184 cccctcccctcaaaaatgtttgaattacactcccc 4758150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 13623189 - 13623231
Alignment:
Q  174 ctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||| |||||||||||| |||||| |||||||    
T  13623189 ctcccctcaaagatgcttgaattacacttccctcccctcttat 13623231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 19547096 - 19547050
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||    
T  19547096 tcccctcccctcaaagatgcttgaattacactattctcctctcttat 19547050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 40974764 - 40974718
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||| |||||||||||||||||||| || ||| |||||||    
T  40974764 tcccctcccctgaaagatgtttgaattacacttccgtcccctcttat 40974718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 5398038 - 5398087
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacact 201  Q
    ||||||||||||||| ||||| || |||||||||||  ||||||||||||    
T  5398038 gagtaaattacactcctctcctcttccctcaaagatccttgaattacact 5398087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 54606504 - 54606444
Alignment:
Q  151 tgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||     |||||||| ||| ||||||||||||||||||||||  |||||||    
T  54606504 tgagtaaattacactct-----cctcccctaaaaaatgtttgaattacactcccctctcctcttat 54606444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 20030642 - 20030598
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| |||||||||| | |||||| |||||||    
T  20030642 ccctcccctcaaagatgcttgaattacatttccctcccctcttat 20030598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 32255789 - 32255745
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| |||||||||||| |||||  |||||||    
T  32255789 ccctcccctcaaagatgcttgaattacacttccctctcctcttat 32255745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 40036475 - 40036416
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||     ||| |||||||||||| |||||||||| |||||||| |||||||    
T  40036475 gagtaaattacactct-----cctaccctcaaagatgcttgaattacattcccctcccctcttat 40036416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 49080688 - 49080629
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||     ||||| |||||||||| |||||||||| |||||||| |||||||    
T  49080688 gagtaaattacactct-----cctcctctcaaagatgcttgaattacattcccctcccctcttat 49080629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 27619718 - 27619654
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  27619718 gagtaaattacactctcctccccttccctcaaagatgcttgaattacactcccctcccctcttat 27619654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 2935845 - 2935781
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||  ||||||| |||||||||||| ||||||||||||||| ||| |||||||    
T  2935845 gagtaaattacactcccctccccttccctcaaagatgcttgaattacactcccttcccctcttat 2935781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 11639903 - 11639950
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  11639903 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttat 11639950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 317285 - 317331
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  317285 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 317331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 318025 - 317979
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  318025 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 317979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 6185400 - 6185354
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  6185400 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 6185354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 6191916 - 6191870
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  6191916 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 6191870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 25606931 - 25606977
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  25606931 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 25606977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 29824097 - 29824051
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  29824097 ctcccctcccttcaaagatgtttgaattacactcccctcccctctta 29824051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 38790080 - 38790126
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  38790080 tcccctcccctcaaagatgcttgaattacactcccctcccctcttat 38790126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 29823338 - 29823383
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  29823338 tcccctcccctcaaagatgtttgaattacactctcctcccctctta 29823383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 2790074 - 2790133
Alignment:
Q  151 tgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||     |||| ||||||||||||||||||||||||||||||| ||||||    
T  2790074 tgagtaaattacactct-----cctctcctcaaagatgtttgaattacactcccctcccctctta 2790133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 13067804 - 13067848
Alignment:
Q  179 ctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    |||||||||||||||||||||||||||||| || |||||||||||    
T  13067804 ctcaaagatgtttgaattacactcccctcccctattattcaaaac 13067848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 25266 - 25309
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||    
T  25266 ccctcccctcaaagatgcttgaattacactcccctcccctctta 25309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 6184659 - 6184698
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  6184659 ctcccctcccctcaaagatgtttgaattacactctcctcc 6184698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 8122634 - 8122681
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| |||||||||||||||||  ||||||||    
T  8122634 ctcccctcccctcaaagatgcttgaattacactccccttatctcttat 8122681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 8535501 - 8535462
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  8535501 ctcccctcccgtcaaagatgtttgaattacactcccctcc 8535462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 27144188 - 27144235
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||    
T  27144188 ctcccctcccctcaaagatgcttaaattacactcccctcccctcttat 27144235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 38790823 - 38790761
Alignment:
Q  149 aatgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||| |||     |||||||||||||||||||||||||||||||||||  |||||||    
T  38790823 aatgagtaaattacattct-----cctcccctcaaagatgtttgaattacactcccctctcctcttat 38790761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 42813638 - 42813599
Alignment:
Q  177 ccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  42813638 ccctcaaagatgcttgaattacactcccctcctctcttat 42813599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 46011187 - 46011140
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  46011187 ctcctctcccctcaaagatgcttgaattacactccccttctctcttat 46011140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 26014 - 25968
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  26014 ctccccttccctcaaagatgtttgaattacactcacctcccctctta 25968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 2146043 - 2146089
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  2146043 ctcccctcccttcaaagatgcttgaattacactcccctcccctctta 2146089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 2146942 - 2146896
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||| | ||||||    
T  2146942 ctcccctcccctcaaagatgcttgaattacactccccttccctctta 2146896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 38670751 - 38670705
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  38670751 ctcccctctcctcaaagatgcttgaattacactcccctcccctctta 38670705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 29736120 - 29736185
Alignment:
Q  151 tgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||  |||||||||| || ||||||| |||||||||||||| || | |||||||    
T  29736120 tgagtaaattacacttctctcccctcctcttaaagatgcttgaattacactccacttccctcttat 29736185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 5951661 - 5951705
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||| |||||||||||||||||| |||| ||||||||||||||    
T  5951661 ccctcctctcaaagatgtttgaatttcactaccctcctctcttat 5951705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 19435360 - 19435316
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||    
T  19435360 ccctcctctcaaagatgtttgaattacactcctctccactcttat 19435316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 40401631 - 40401572
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||     |||||| ||||||||| ||||||||||||||||||| |||||||    
T  40401631 gagtaaattacactct-----cctcccttcaaagatgcttgaattacactcccctcccctcttat 40401572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 45941462 - 45941506
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||||    
T  45941462 ccctcctctcaaagatgtttgaattacacttcccgcctctcttat 45941506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 48981883 - 48981927
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||    
T  48981883 ccctcccctcaaagatgcttgaattacactcccatcccctcttat 48981927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 16425344 - 16425391
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| ||||||| |||||||||||||||| |||| |||||||    
T  16425344 ctcccctcccatcaaagaagtttgaattacactcctctcccctcttat 16425391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 36688927 - 36688880
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| ||||||| |||||| |||||||||||||||||||| |||||||    
T  36688927 ctcctctccccttaaagatctttgaattacactcccctcccctcttat 36688880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 25607671 - 25607633
Alignment:
Q  177 ccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  25607671 cccttaaagatgtttgaattacactcccctcccctctta 25607633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 40343769 - 40343811
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||| ||||||||||||||||| | ||||||    
T  40343769 cctcccctcaaagatgcttgaattacactccccttccctctta 40343811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 11641045 - 11641008
Alignment:
Q  171 cccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||| || ||||||||||||||||    
T  11641045 cccctcccctcaaagatggttaaattacactcccctcc 11641008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 20261679 - 20261647
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactc 202  Q
    ||||||||||||||||||| |||||||||||||    
T  20261679 tcccctcccctcaaagatgcttgaattacactc 20261647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 29615526 - 29615570
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| |||||||||||| ||||||||||||| ||||| |||||||    
T  29615526 cccttccctcaaagatgcttgaattacactctcctcccctcttat 29615570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 34999195 - 34999239
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||| ||||||  ||||||||||||||||||| |||||||    
T  34999195 ccctcccctaaaagatacttgaattacactcccctcccctcttat 34999239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 39186255 - 39186295
Alignment:
Q  169 ctcccctcccct-caaagatgtttgaattacactcccctcc 208  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  39186255 ctcccctccccttcaaagatgcttgaattacactcccctcc 39186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 13395179 - 13395242
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  13395179 gagtaaattacactcccctcccctcccctcaaagatgcttgaattacactcccctcccctctta 13395242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 754858 - 754922
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||||||| |||| |||||||    
T  754858 gagtaaattacactcccctcccctcccctcaaagatgcttgaattacactcctctcccctcttat 754922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 616199 - 616153
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||    
T  616199 ctccactcccctcaaagatgcttgaattacactcccctcctctctta 616153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 7165403 - 7165449
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  7165403 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 7165449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 7166146 - 7166100
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  7166146 ctcccctcccctcaaagatgcttgaattacacttccctcctctctta 7166100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 8193058 - 8193012
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  8193058 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 8193012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 10156046 - 10156000
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  10156046 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 10156000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 13392819 - 13392773
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  13392819 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 13392773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 13395958 - 13395912
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  13395958 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 13395912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 47029824 - 47029870
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  47029824 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 47029870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 721332 - 721376
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  721332 ccctcccctcaaagatgcttgaattacactcccctcccctcttat 721376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 23722116 - 23722072
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  23722116 ccctcccctcaaagatgcttgaattacactcccctcccctcttat 23722072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 6232357 - 6232404
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  6232357 ctcccctcccttcaaagatgcttgaattacactcccctcccctcttat 6232404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 10155510 - 10155549
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  10155510 ctcccctcccctcaaagatgtttgaattacactctcctcc 10155549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 20545086 - 20545039
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  20545086 ctcccctcccctcagagatgcttgaattacactcccctcccctcttat 20545039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 26705737 - 26705690
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  26705737 ctcccttcccttcaaagatgcttgaattacactcccctcctctcttat 26705690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 35667351 - 35667304
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  35667351 ctcccctcccatcaaagatgcttgaattacactcccctcccctcttat 35667304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 55068850 - 55068897
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  55068850 ctcccctcctctcaaagatgcttgaattacactcccctcccctcttat 55068897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 796390 - 796436
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  796390 ctcccctcccttcaaagatgcttgaattacactcccctcccctctta 796436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 6233171 - 6233125
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||    
T  6233171 ctcccctcccctcaaagatacttgaattacactcccctcccctctta 6233125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 12250681 - 12250727
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  12250681 ctcccttcccctcaaagatgcttgaattacactcccctcccctctta 12250727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 23171126 - 23171172
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  23171126 ctcccctcccctcatagatgcttgaattacactcccctcccctctta 23171172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 23269175 - 23269221
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  23269175 ctcccctcccttcaaagatgcttgaattacactcccctcccctctta 23269221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 33047296 - 33047250
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||||    
T  33047296 tcccctccccttaaagttgtttgaattacactcccctcccctcttat 33047250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 47030550 - 47030504
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  47030550 ctcccctcccctcaaagatgcttgaattacactctcctcccctctta 47030504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 28464210 - 28464255
Alignment:
Q  171 cccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||| |||||||||||| |||||| |||||||    
T  28464210 cccctcccctcaaagatgcttgaattacacttccctcccctcttat 28464255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 46095414 - 46095459
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  46095414 tcccctcccctcaaagatgcttgaattacactctcctcccctctta 46095459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 48372409 - 48372469
Alignment:
Q  151 tgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||     ||||||||||||||||||||||||||| || ||||| |||||||    
T  48372409 tgagtaaattacactct-----cctcccctcaaagatgtttgaattacattcgcctcccctcttat 48372469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 755591 - 755547
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||    
T  755591 ccctcccctcaaagatgcttgaattatactcccctcccctcttat 755547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 4949956 - 4949988
Alignment:
Q  184 agatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||||||||||||||    
T  4949956 agatgtttgaattacactcccctcctctcttat 4949988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 13482193 - 13482237
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||||    
T  13482193 ccctcccctcaaagatgcttgaattacactctcctcccctcttat 13482237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 19314078 - 19314042
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    ||||||||||||||||| |||||||||||||||||||    
T  19314078 ccctcccctcaaagatgcttgaattacactcccctcc 19314042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 35667817 - 35667777
Alignment:
Q  176 cccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  35667817 cccctcaaagatgcttgaattacactcccctcccctcttat 35667777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 37423138 - 37423189
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    ||||||||||||||||     |||||||||||||||| |||||||||||||||||||    
T  37423138 gagtaaattacactct-----cctcccctcaaagatgcttgaattacactcccctcc 37423189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 615429 - 615487
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||     |||||||||||||||| ||||||||||||||||| | ||||||    
T  615429 gagtaaattacactct-----cctcccctcaaagatgcttgaattacactccccttcactctta 615487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 722047 - 722000
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||    
T  722047 ctcccctcccctcaaagatacttgaattacactcctctcccctcttat 722000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 6232326 - 6232365
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  6232326 ctcccctcccttcaaagatgcttgaattacactcccctcc 6232365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 6232416 - 6232466
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctc 207  Q
    ||||||||||||||||     |||||||||||||||| ||||||||||||||||||    
T  6232416 gagtaaattacactct-----cctcccctcaaagatgcttgaattacactcccctc 6232466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 204
Target Start/End: Complemental strand, 6233850 - 6233819
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactccc 204  Q
    ||||||||||||||||||||||||||||||||    
T  6233850 cctcccctcaaagatgtttgaattacactccc 6233819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 7478683 - 7478722
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactcccctcctctc 212  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  7478683 cctctcctcaaagatgtttgaattacactcctctcctctc 7478722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 7797681 - 7797642
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  7797681 ctcccctcccctcaaagatgcttgaattacattcccctcc 7797642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 16192383 - 16192336
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||  || ||||||| |||||||||||||||||||||||||||    
T  16192383 ctcccctctactgaaagatgcttgaattacactcccctcctctcttat 16192336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 17722757 - 17722804
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| | ||||||| ||||||||||||||||||| |||||||    
T  17722757 ctcccctccctttaaagatgcttgaattacactcccctcccctcttat 17722804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 19313352 - 19313399
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  19313352 ctcccctcccctcaaagatgcttgaattacactctcatcccctcttat 19313399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 26809126 - 26809076
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctc 207  Q
    ||||||||||||||||     ||| |||||||||||||||||||||||||||||||    
T  26809126 gagtaaattacactct-----ccttccctcaaagatgtttgaattacactcccctc 26809076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 35667449 - 35667402
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||| |||||||||||||| |||||||||||| |||||| |||||||    
T  35667449 ctcccttcccctcaaagatgcttgaattacacttccctcccctcttat 35667402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 35667634 - 35667587
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||  ||||| |||||||    
T  35667634 ctcccctcccctcaaagatgcttgaattacactttcctcccctcttat 35667587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 38720679 - 38720640
Alignment:
Q  177 ccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  38720679 ccctcaaagatgtttgaattacactctcatcctctcttat 38720640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 41919976 - 41919929
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||||||    
T  41919976 ctcctctcccctcaaagatgcttgaattacactcttctcctctcttat 41919929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 4950663 - 4950625
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctc 207  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  4950663 ctcccctcccctcaaagatgcttgaatcacactcccctc 4950625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 16191712 - 16191742
Alignment:
Q  193 aattacactcccctcctctcttattcaaaac 223  Q
    |||||||||||||||||||||||||||||||    
T  16191712 aattacactcccctcctctcttattcaaaac 16191742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 17730248 - 17730210
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctc 207  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  17730248 ctcccctcccctcaaagatgcttgaattacactctcctc 17730210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 23308813 - 23308851
Alignment:
Q  177 ccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  23308813 ccctcaaagatgcttgaattacactcccctcccctctta 23308851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 23721373 - 23721418
Alignment:
Q  150 atgagtaaattacactcttctcccctcccctcaaagatgtttgaattacac 200  Q
    ||||||||||||||||||     ||||||||||||||||||||||||||||    
T  23721373 atgagtaaattacactct-----cctcccctcaaagatgtttgaattacac 23721418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 33032883 - 33032845
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctc 207  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  33032883 ctcccctcccctcaaagatgcttgaattacactctcctc 33032845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 36422118 - 36422156
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctc 207  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  36422118 ctcccctcccctgaaagatgcttgaattacactcccctc 36422156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 36898167 - 36898129
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctc 207  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  36898167 ctcccctcccctcaaagatacttgaattacactcccctc 36898129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 46096187 - 46096141
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||| ||||||||| ||||||||||||||| ||| ||||||    
T  46096187 ctcccctcccttcaaagatgcttgaattacactcccttcccctctta 46096141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 46138688 - 46138642
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||| ||||||||| ||||||||||||||| ||| ||||||    
T  46138688 ctcccctcccttcaaagatgcttgaattacactcccttcccctctta 46138642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 54145023 - 54145077
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    |||| ||||||||||||||| |||||||||||| | |||| ||| ||||||||||    
T  54145023 ctcctctcccctcaaagatgcttgaattacactgctctcccctcctattcaaaac 54145077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 56310125 - 56310087
Alignment:
Q  178 cctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  56310125 cctcaaagatgcttgaattacactctcctcctctcttat 56310087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 6711239 - 6711284
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctt 214  Q
    ||||| |||||||||||||| |||||||||||| |||||| |||||    
T  6711239 ctcccatcccctcaaagatgcttgaattacacttccctcccctctt 6711284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 23309537 - 23309500
Alignment:
Q  178 cctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  23309537 cctcaaagatgcttgaattacactcccctcccctctta 23309500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 25010123 - 25010078
Alignment:
Q  171 cccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||| ||||||||| ||||||||||||| ||||| |||||||    
T  25010123 cccctcccttcaaagatgcttgaattacactctcctcccctcttat 25010078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 35665961 - 35666006
Alignment:
Q  171 cccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||| |||||||| ||| | ||||||||||||    
T  35665961 cccctcccctcaaagatgcttgaattatacttctctcctctcttat 35666006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 53306428 - 53306368
Alignment:
Q  150 atgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||||     ||| ||||||||||||  |||||||||||||||||| ||||||    
T  53306428 atgagtaaattacactct-----ccttccctcaaagatgcatgaattacactcccctcccctctta 53306368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 55815060 - 55815019
Alignment:
Q  174 ctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||| ||||||||| ||||||||||||| ||||||||||||    
T  55815060 ctcccatcaaagatgcttgaattacactctcctcctctctta 55815019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 13771725 - 13771757
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacact 201  Q
    |||||||||||||||||||| ||||||||||||    
T  13771725 ctcccctcccctcaaagatgcttgaattacact 13771757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 18362762 - 18362718
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| ||||||||||||| ||| | |||||||    
T  18362762 ccctcccctcaaagatgcttgaattacactctcctaccctcttat 18362718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 30192527 - 30192563
Alignment:
Q  180 tcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  30192527 tcaaagatgtttgaattacactctcctcccctcttat 30192563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 36600164 - 36600208
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| ||||||||||||| ||| | |||||||    
T  36600164 ccctcccctcaaagatgcttgaattacactctcctaccctcttat 36600208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 37709634 - 37709590
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctct 213  Q
    |||| ||||||||||||||| |||||||||| |||||||| ||||    
T  37709634 ctcctctcccctcaaagatgcttgaattacattcccctcccctct 37709590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 45847145 - 45847189
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||| ||| ||||||||||||||||||| |||||| |||||||    
T  45847145 ccctccgctctaagatgtttgaattacacttccctcccctcttat 45847189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 16614156 - 16614220
Alignment:
Q  155 taaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    ||||||||||||||||||||    |||||||||| ||||||||||||||||||| ||||||||||||||    
T  16614156 taaattacactcttctcccc----ctcaaagatgcttgaattacactcccctcccctcttattcaaaac 16614220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 36762120 - 36762169
Alignment:
Q  168 tctcccctcccctcaaagatgtttgaattacactcccctcctctcttatt 217  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  36762120 tctcccctcccctcaaagatgcttgaattacactcccctcccctcttatt 36762169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 1932086 - 1932042
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  1932086 ccctcccctcaaagatgtttgaattatactcccctcctctcttat 1932042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 27028725 - 27028661
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||  ||| ||||| || ||||||| |||||||||||||||||||||||||||    
T  27028725 gagtaaattacactcccctctcctcctcttaaagatgcttgaattacactcccctcctctcttat 27028661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 9119615 - 9119569
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  9119615 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 9119569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 20691121 - 20691167
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  20691121 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 20691167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 37333910 - 37333956
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  37333910 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 37333956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 37657388 - 37657434
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  37657388 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 37657434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 17781232 - 17781183
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacact 201  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  17781232 gagtaaattacactcccctcccctcccctcaaagatgcttgaattacact 17781183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 19408534 - 19408593
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||     |||||||||||||||| ||||||||||||||||||| |||||||    
T  19408534 gagtaaattacactct-----cctcccctcaaagatgcttgaattacactcccctcccctcttat 19408593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 13280214 - 13280167
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||| ||||||||||||||||||||||||| |||||| |||||||    
T  13280214 ctcccctaccctcaaagatgtttgaattacactgccctcccctcttat 13280167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 20570135 - 20570182
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  20570135 ctcccctcccttcagagatgcttgaattacactcccctcctctcttat 20570182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 24624827 - 24624870
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||    
T  24624827 ccctcccctcaaagatgcttgaattacactcccctcccctctta 24624870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 27979242 - 27979285
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||| ||||||||||||||||||| |||||||    
T  27979242 cctcccctcaaagatgcttgaattacactcccctcccctcttat 27979285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 27979967 - 27979920
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||||||||||||| | |||| ||||||||    
T  27979967 ctcccctcccctcaaagatgtttgaattacaccctcctcatctcttat 27979920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 31477032 - 31476985
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  31477032 ctcccctctcctcaaagatgcttgaattacactcccctcccctcttat 31476985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 32020471 - 32020518
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| |||||||||| |||||||| |||||||    
T  32020471 ctcccctcccctcaaagatgcttgaattacattcccctcccctcttat 32020518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 35751523 - 35751570
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  35751523 ctcccctcccctcaaagatgcttgaattacactcccttcccctcttat 35751570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 36737516 - 36737469
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  36737516 ctcccctccccttaaagatgcttgaattacactcccctcccctcttat 36737469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 1199812 - 1199766
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||| | ||||||    
T  1199812 ctcccctcccctcaaagatgcttgaattacactccccttccctctta 1199766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 8572692 - 8572753
Alignment:
Q  150 atgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||     |||||||||||| ||| |||||||||||||||||| ||||||||    
T  8572692 atgagtaaattacactct-----cctcccctcaaaaatgcttgaattacactcccctcatctcttat 8572753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 9118842 - 9118888
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||    
T  9118842 ctcccctcctcttaaagatgtttgaattacactcccttcctctctta 9118888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 24625562 - 24625516
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  24625562 ctcccctcccctcaaagatgcttgaattacacccccctcccctctta 24625516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 37658141 - 37658096
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  37658141 tcccctcccctcaaatatgcttgaattacactcccctcccctctta 37658096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 6029464 - 6029508
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  6029464 ccctcccctcaaagatgcttgaattacactctcatcctctcttat 6029508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 10688324 - 10688280
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| |||||||||||||||||||||  |||||||||||||||||    
T  10688324 cccttccctcaaagatgtttgaattatcctcccctcctctcttat 10688280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 20184078 - 20184034
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||||    
T  20184078 ccctcccttcaaagatgcttgaattacactcccctcccctcttat 20184034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 6047992 - 6048039
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||  |||||||||||||||||||||| |||||| |||||||    
T  6047992 ctcccctcctatcaaagatgtttgaattacacttccctcccctcttat 6048039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 18524431 - 18524384
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| |||||||||| || ||||| |||||||    
T  18524431 ctcccctcccctcaaagatgcttgaattacattcgcctcccctcttat 18524384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 22730416 - 22730459
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||||||||||||| |||||  |||||||    
T  22730416 cctcccctcaaagatgtttgaattacactaccctctcctcttat 22730459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 22731127 - 22731088
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  22731127 ctcccctcccctcaaaaatatttgaattacactcccctcc 22731088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 3934060 - 3933999
Alignment:
Q  150 atgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||     | |||||||||||||| |||||||||||| |||||| |||||||    
T  3934060 atgagtaaattacactct-----cttcccctcaaagatgcttgaattacacttccctcccctcttat 3933999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 4054738 - 4054776
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctc 207  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  4054738 ctcccctcccctcaaagatgcatgaattacactcccctc 4054776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 4055476 - 4055430
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||| ||||||||||||| ||||||||||||| ||||| ||||||    
T  4055476 ctccccacccctcaaagatgcttgaattacactctcctcccctctta 4055430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 20541049 - 20541003
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| |||||||||| || ||||| ||||||    
T  20541049 ctcccctcccctcaaagatgcttgaattacattctcctcccctctta 20541003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 20691865 - 20691819
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| |||||||||| | | |||||||||||    
T  20691865 ctcccctcccctcaaagatgcttgaattacaattcactcctctctta 20691819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 42599054 - 42599008
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||  |||||||||||||||| ||||| |||||||    
T  42599054 tcccctcccctcaaaactgtttgaattacactctcctccactcttat 42599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 31850742 - 31850694
Alignment:
Q  149 aatgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactc 202  Q
    |||||||||||||||     |||||||||||||||||||| |||||||||||||    
T  31850742 aatgagtaaattaca-----ctcccctcccctcaaagatgcttgaattacactc 31850694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 5138309 - 5138353
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| |||||||||||| || ||||||||||||||||| ||||||    
T  5138309 cccttccctcaaagatgcttaaattacactcccctcctttcttat 5138353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 6031416 - 6031384
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacact 201  Q
    |||| ||||||||||||||||||||||||||||    
T  6031416 ctcctctcccctcaaagatgtttgaattacact 6031384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 14594064 - 14594123
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||     ||||||||||||||||||||||||||| ||  |||| |||||||    
T  14594064 gagtaaattacactct-----cctcccctcaaagatgtttgaattacaatcatctcccctcttat 14594123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 17781124 - 17781077
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactccc 204  Q
    ||||||||||||||||     |||||||||||||||| |||||||||||||||    
T  17781124 gagtaaattacactct-----cctcccctcaaagatgcttgaattacactccc 17781077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 31601608 - 31601572
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  31601608 ccctccccttaaagatgcttgaattacactcccctcc 31601572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 34173781 - 34173734
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  34173781 ctcccctcccctcaaagatgtttgaattacactcccctcccctcttat 34173734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 37199667 - 37199620
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  37199667 ctcccctcccctcaaagatgtttgaattacactcccctcccctcttat 37199620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 11796877 - 11796831
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  11796877 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 11796831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 34248130 - 34248084
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  34248130 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 34248084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 16111233 - 16111188
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  16111233 tcccctcccctcaaagatgcttgaattacactcccctccactctta 16111188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 44332577 - 44332528
Alignment:
Q  174 ctcccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    ||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  44332577 ctcccctcaaagatgcttgaattacactcccctcccctcttactcaaaac 44332528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 1366477 - 1366433
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||    
T  1366477 ccctccccttaaagatgtttgaattacactctcctcctctcttat 1366433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 3515537 - 3515493
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||    
T  3515537 ccctcccctcaaagatgtttgaattacacccccctcccctcttat 3515493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 20894346 - 20894302
Alignment:
Q  171 cccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  20894346 cccctcccctcaaagatgcttgaattacactcccctcccctctta 20894302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 38910684 - 38910728
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  38910684 ccctcctcttaaagatgtttgaattacactcccctcctctcttat 38910728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 5475201 - 5475154
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||| ||||| |||||||    
T  5475201 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttat 5475154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 6078067 - 6078016
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    |||||| |||||||||||||||||||||||||||| | |||||| |||||||    
T  6078067 ccctcctctcaaagatgtttgaattacactccccttccctcttaatcaaaac 6078016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 12414353 - 12414310
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||||||||||| || |||||||||||||    
T  12414353 cctcccctcaaagatgtttgaattacattctcctcctctcttat 12414310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 12426413 - 12426370
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||||||||||| || |||||||||||||    
T  12426413 cctcccctcaaagatgtttgaattacattctcctcctctcttat 12426370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 17829756 - 17829717
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  17829756 ctcccctcccctcaaagatgcttgaattacactcccctcc 17829717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 33146041 - 33146088
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  33146041 ctcccctcccctcaaagatgcttgaattgcactcccctcccctcttat 33146088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 34247389 - 34247428
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  34247389 ctcccctcccctcaaagatgcttgaattacactcccctcc 34247428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 551837 - 551875
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctc 207  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  551837 ctcccctcccttcaaagatgtttgaattacactcccctc 551875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 35899144 - 35899190
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||    
T  35899144 ctcccctcccctcaaagatgcttcaattacactcccctcccctctta 35899190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 38973212 - 38973166
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||    
T  38973212 ctcccctcccctcaaagatgcttcaattacactcccctcccctctta 38973166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 39160349 - 39160303
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||    
T  39160349 ctcccctcccctcaaagatgcttgaattacattcccctcccctctta 39160303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 39208845 - 39208891
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||    
T  39208845 ctcccctcccctcaaagatgcttgaattacattcccctcccctctta 39208891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 40769436 - 40769390
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||    
T  40769436 tcccctcccctcaaagatggttgaattacactcccctcacctcttat 40769390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 17829060 - 17829104
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||    
T  17829060 ccctcccctcaaagatgcttgaattacactccactcccctcttat 17829104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 34173055 - 34173099
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||    
T  34173055 ccctcccctcaaagatgcttgaattacactaccctcccctcttat 34173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 37009004 - 37009048
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||||    
T  37009004 ccctcccatcaaagatgcttgaattacactcccctcccctcttat 37009048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 1534712 - 1534669
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| ||||||| |||||||||||||||||| ||||||||||||    
T  1534712 cctctcctcaaatatgtttgaattacactcctctcctctcttat 1534669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 6229952 - 6229905
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||  ||||||||||||||||| | |||||||    
T  6229952 ctcccctcccctcaaagatccttgaattacactccccttccctcttat 6229905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 11051565 - 11051612
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||| ||||||  |||||||||||||||| ||||||||||    
T  11051565 ctcccctcccctaaaagatacttgaattacactccccacctctcttat 11051612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 11796146 - 11796193
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| ||||||||| || |||||||||||||||| |||||||    
T  11796146 ctcccctcccttcaaagatgcttcaattacactcccctcccctcttat 11796193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 22606322 - 22606369
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||  ||||||||||| || ||||||||||||    
T  22606322 ctcccctcccctcaaagatccttgaattacacacctctcctctcttat 22606369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 28167546 - 28167593
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||| |||||||||||| ||||||||||||||||| | |||||||    
T  28167546 ctccccttccctcaaagatgattgaattacactccccttccctcttat 28167593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 31597231 - 31597278
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||| |||| ||||||||||||| ||||| |||||||    
T  31597231 ctcccctcccctcaaggatgcttgaattacactcacctcccctcttat 31597278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 32023819 - 32023772
Alignment:
Q  176 cccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    |||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  32023819 cccctctaagatgtttgaattatacccccctcccctcttattcaaaac 32023772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 35954062 - 35954015
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| | |||||||||||||||||||| |||||| |||||||    
T  35954062 ctcccctcccttaaaagatgtttgaattacacttccctcccctcttat 35954015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 37198938 - 37198973
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctc 207  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37198938 ccctcccctcaaagatgcttgaattacactcccctc 37198973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 43657660 - 43657621
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  43657660 ctcccctcccctcaaagatgcttgaattacacttccctcc 43657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 22297621 - 22297675
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    |||||||| | | ||||||| ||||||||||||| ||||| ||||||||||||||    
T  22297621 ctcccctcactttaaagatgcttgaattacactctcctcccctcttattcaaaac 22297675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 22607045 - 22607003
Alignment:
Q  174 ctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||    
T  22607045 ctcccatcaaagatgcttgaattacactcccctcttctcttat 22607003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 16110488 - 16110533
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||| ||| |||||||||||||| |||| ||||||    
T  16110488 tcccctcccctcaaaaatgcttgaattacactcctctcccctctta 16110533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 4438035 - 4437999
Alignment:
Q  180 tcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||||| |||| |||||||    
T  4438035 tcaaagatgtttgaattacactcctctcccctcttat 4437999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 7940058 - 7940022
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||| |||||||||||||||||||||||| |||||    
T  7940058 ccctcctctcaaagatgtttgaattacactctcctcc 7940022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 11563791 - 11563850
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||     |||||||||||||||| ||||||||||||| | ||| |||||||    
T  11563791 gagtaaattacactct-----cctcccctcaaagatgcttgaattacactctcatcccctcttat 11563850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 15007157 - 15007121
Alignment:
Q  180 tcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||| |||||||||||||||||||| |||||||    
T  15007157 tcaaagatctttgaattacactcccctcccctcttat 15007121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 32718 - 32772
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttattcaaaac 223  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  32718 ctcccctcccttcaaagatgcttgaattacactcccctcccctcttattcaaaac 32772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 25597782 - 25597828
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  25597782 ctcccctcccctcaaagatgcttgaattacactcccctcctctctta 25597828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 14363766 - 14363830
Alignment:
Q  152 gagtaaattacactcttctcccc-tcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||  |||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  14363766 gagtaaattacactcccctccccctcccctcaaagatgcttgaattacactcccctcccctctta 14363830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 3075315 - 3075362
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  3075315 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttat 3075362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 11141129 - 11141082
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||    
T  11141129 ctcccctcccctcaaagatgcttgaattacattcccctcctctcttat 11141082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 14364545 - 14364490
Alignment:
Q  153 agtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    ||||||||||||||  |||||||| ||||||||||| |||||||||||||||||||    
T  14364545 agtaaattacactcccctcccctctcctcaaagatgcttgaattacactcccctcc 14364490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 14879529 - 14879576
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||    
T  14879529 ctcccctcccctcaaagatgtttgaattacactctcctcccctcttat 14879576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 6293265 - 6293219
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  6293265 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 6293219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 22934298 - 22934344
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  22934298 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 22934344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 10216203 - 10216158
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctt 214  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||    
T  10216203 ctcccctcccctcaaagatgcttgaattacactcccctcccctctt 10216158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 11759397 - 11759436
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  11759397 ctcccctcccctcaaagatgcttgaattacactcccctcc 11759436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 14880256 - 14880209
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  14880256 ctcctctcccctcaaagatgcttgaattacactcccctcccctcttat 14880209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 17564677 - 17564724
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  17564677 ctcccctcctctcaaagatgtttgaattacacttccctcccctcttat 17564724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 36016827 - 36016780
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||| |||||||||||| |||||||||| ||||||||||||||||    
T  36016827 ctccccttccctcaaagatgcttgaattacaatcccctcctctcttat 36016780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 6292523 - 6292569
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||    
T  6292523 ctcccctcccctcaaagatgcttgaattacattcccctcccctctta 6292569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 39998379 - 39998425
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  39998379 ctcccctcccctcaaagatgcttgaattacactctcctcccctctta 39998425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 253535 - 253571
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccc 205  Q
    |||||||||||||||||||| ||||||||||||||||    
T  253535 ctcccctcccctcaaagatgcttgaattacactcccc 253571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 662323 - 662287
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccc 205  Q
    |||||||||||||||||||| ||||||||||||||||    
T  662323 ctcccctcccctcaaagatgcttgaattacactcccc 662287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 848121 - 848085
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccc 205  Q
    |||||||||||||||||||| ||||||||||||||||    
T  848121 ctcccctcccctcaaagatgcttgaattacactcccc 848085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 3075144 - 3075188
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||    
T  3075144 ccctcccctcaaagatgcttgaattacactaccctcccctcttat 3075188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 11760136 - 11760088
Alignment:
Q  168 tctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||| ||||||||| |||||||||| || |||||||||||||    
T  11760136 tctcccctcccttcaaagatgcttgaattacattctcctcctctcttat 11760088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 37872290 - 37872326
Alignment:
Q  180 tcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||| ||||||||||||||||||||||||    
T  37872290 tcaaagatgtttaaattacactcccctcctctcttat 37872326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 8437906 - 8437953
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||  | |||||||||||||||||||||| ||||||||||||    
T  8437906 ctcccctccgtttaaagatgtttgaattacactccactcctctcttat 8437953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 14094218 - 14094171
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| ||||| ||||||||| ||||||||||||||||||| |||||||    
T  14094218 ctcctctcccttcaaagatgcttgaattacactcccctcccctcttat 14094171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 215
Target Start/End: Complemental strand, 25485483 - 25485448
Alignment:
Q  180 tcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||||||||||||||| ||||||    
T  25485483 tcaaagatgtttgaattacactcccctcccctctta 25485448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 33969621 - 33969582
Alignment:
Q  175 tcccctcaaagatgtttgaattacactcccctcctctctt 214  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  33969621 tcccctcaaagatgcttgaattacactcctctcctctctt 33969582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 44284418 - 44284371
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||| | ||||| ||||||||||||||||||| |||||||    
T  44284418 ctcccctcccctaagagatgcttgaattacactcccctcccctcttat 44284371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 4855997 - 4855955
Alignment:
Q  174 ctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||    
T  4855997 ctcccttcaaagatgtttgaattacactcctctcatctcttat 4855955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 22936042 - 22935996
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||| ||||||||||||||| || |||||||||||||||| ||||||    
T  22936042 ctccactcccctcaaagatgcttaaattacactcccctcccctctta 22935996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 25598525 - 25598479
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||| |||| |||||||||| ||||||||||||||||||| ||||||    
T  25598525 ctcctctcctctcaaagatgcttgaattacactcccctcccctctta 25598479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 29636446 - 29636408
Alignment:
Q  177 ccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  29636446 ccctcaaagatgcttgaattacactcccctcccctctta 29636408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 29726460 - 29726422
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctc 207  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  29726460 ctcccctcccctcaaagatgcttgaattacactctcctc 29726422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 32904666 - 32904712
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||| |||| |||||||||| ||| |||||||    
T  32904666 tcccctcccctcaaagatgcttgatttacactcccgtcccctcttat 32904712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 34364646 - 34364608
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctc 207  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  34364646 ctcccctcccctcaaagatgcttgaattaccctcccctc 34364608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 35366335 - 35366369
Alignment:
Q  183 aagatgtttgaattacactcccctcctctcttatt 217  Q
    ||||||||||||| |||||||||||||||||||||    
T  35366335 aagatgtttgaatcacactcccctcctctcttatt 35366369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 40791822 - 40791776
Alignment:
Q  170 tcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||| ||||||||| |||||||||||||| |||| |||||||    
T  40791822 tcccctcccatcaaagatgcttgaattacactcctctcccctcttat 40791776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 5551572 - 5551609
Alignment:
Q  179 ctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  5551572 ctcaaagatgcttgaattacactctcctcctctcttat 5551609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 13439398 - 13439435
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccct 206  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  13439398 ctcccctcccctcaaagatgcttgaattacacttccct 13439435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 24810323 - 24810290
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactc 202  Q
    ||||||||||||||||||| ||||||||||||||    
T  24810323 ctcccctcccctcaaagatatttgaattacactc 24810290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 32904281 - 32904240
Alignment:
Q  175 tcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  32904281 tcccttcaaagatgcttgaattacactcccctcccctcttat 32904240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 40791061 - 40791102
Alignment:
Q  175 tcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||||||| |||| ||||| |||||||    
T  40791061 tcccctcaaagatgtttgaattatactctcctcccctcttat 40791102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 8442664 - 8442712
Alignment:
Q  168 tctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| |||||||||| ||||||||||||| | ||| |||||||    
T  8442664 tctcccctcctctcaaagatgcttgaattacactctcttcccctcttat 8442712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 204
Target Start/End: Complemental strand, 17496986 - 17496958
Alignment:
Q  176 cccctcaaagatgtttgaattacactccc 204  Q
    |||||||||||||||||||||||||||||    
T  17496986 cccctcaaagatgtttgaattacactccc 17496958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 25954171 - 25954135
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccc 205  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  25954171 ctcccctcccttcaaagatgcttgaattacactcccc 25954135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 30354597 - 30354557
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcctctc 212  Q
    ||||||||||||||||  |||||||||||||| ||||||||    
T  30354597 ccctcccctcaaagatacttgaattacactcctctcctctc 30354557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 41312460 - 41312401
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||| |      ||||||| ||||||||||||||||||| |||||||    
T  41312460 gagtaaattacactcttctcccttt-----aaagatgcttgaattacactcccctcccctcttat 41312401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 12927 - 12880
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||    
T  12927 ctcccctcccctcaaagatgtttgaattacactctcttcctctcttat 12880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 421154 - 421201
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  421154 ctccactcccctcaaagatgtttgaattacactcccctcccctcttat 421201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 421995 - 421950
Alignment:
Q  171 cccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||    
T  421995 cccctcccctcaaagatgcttgaattacactcccttcccctcttat 421950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 14056 - 14103
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||| ||||||| |||||||||||||||| |||| |||||||    
T  14056 ctcccctcccatcaaagaagtttgaattacactcctctcccctcttat 14103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 19714 - 19668
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  19714 ctcccctcccctcaaagatgcttgaattacactcccctcccctctta 19668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 19073 - 19112
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  19073 ctcccctcccctcaaagatgcttgaattacaatcccctcc 19112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 10604 - 10647
Alignment:
Q  173 cctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  10604 cctcccctcaaagatgtttgaattacactccccgcccctcttat 10647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 11325 - 11278
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||| ||||||  ||||||||||||||||||| |||||||    
T  11325 ctcccctccccttaaagatacttgaattacactcccctccgctcttat 11278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 733 - 779
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  733 ctcccatcccctcaaagatgcttgaattacactcccctccactctta 779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 34382 - 34336
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  34382 ctcccctcccctcaaagatgcttgaattacgctcccctcccctctta 34336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 18810 - 18764
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  18810 ctcccctcccctcaaaaatgcttgaattacactcccctcccctctta 18764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 10178 - 10125
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttattcaaaa 222  Q
    ||||| |||||||||||||| |||||||||||||||||||  | ||||||||||    
T  10178 ctcccttcccctcaaagatgcttgaattacactcccctcccttgttattcaaaa 10125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 4112 - 4076
Alignment:
Q  172 ccctcccctcaaagatgtttgaattacactcccctcc 208  Q
    ||||||||||||||||| |||||||||||||||||||    
T  4112 ccctcccctcaaagatgcttgaattacactcccctcc 4076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 3415 - 3462
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| ||||||||||| | ||||| |||||||    
T  3415 ctcccctcccctcaaagatgcttgaattacacactcctcccctcttat 3462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1192 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1192
Description:

Target: scaffold1192; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 167 - 214
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||| || |||||||||||||||||| |||||||| |||||||    
T  167 ctcccctcctcttaaagatgtttgaattacagtcccctcccctcttat 214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 2230 - 2277
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||| ||||| ||||||||| ||||||||||||||||||| |||||||    
T  2230 ctcctctcccttcaaagatgcttgaattacactcccctcccctcttat 2277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 204
Target Start/End: Complemental strand, 15396 - 15361
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactccc 204  Q
    |||||||||||||||||||| |||||||||||||||    
T  15396 ctcccctcccctcaaagatgcttgaattacactccc 15361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 27070 - 27023
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||||| |||||||||||||  |||| |||||||    
T  27070 ctcccctcccctcaaagatgcttgaattacactcatctcccctcttat 27023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 26347 - 26407
Alignment:
Q  151 tgagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    |||||||||||||||||     |||||||||||||||| || |||||||||||| || ||||||||    
T  26347 tgagtaaattacactct-----cctcccctcaaagatggttaaattacactcccttcatctcttat 26407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 13463 - 13509
Alignment:
Q  169 ctcccctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||||||||  |||||||||||| ||||| ||||||    
T  13463 ctcccctcccctcaaagatgcatgaattacactctcctcccctctta 13509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 13573 - 13614
Alignment:
Q  174 ctcccctcaaagatgtttgaattacactcccctcctctctta 215  Q
    ||||||||||||||| |||| |||||||||||||| ||||||    
T  13573 ctcccctcaaagatgcttgagttacactcccctcccctctta 13614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 11709 - 11650
Alignment:
Q  152 gagtaaattacactcttctcccctcccctcaaagatgtttgaattacactcccctcctctcttat 216  Q
    ||||||||||||||||     |||||||||||||||| || |||||||||| ||||| |||||||    
T  11709 gagtaaattacactct-----cctcccctcaaagatgcttcaattacactcacctcccctcttat 11650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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