View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1048_low_59 (Length: 275)

Name: NF1048_low_59
Description: NF1048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1048_low_59
NF1048_low_59
[»] chr8 (8 HSPs)
chr8 (64-227)||(8698996-8699180)
chr8 (84-159)||(17793188-17793263)
chr8 (84-159)||(38901359-38901434)
chr8 (84-159)||(14581331-14581406)
chr8 (84-155)||(7176802-7176873)
chr8 (37-69)||(8698944-8698976)
chr8 (84-154)||(14729024-14729094)
chr8 (160-215)||(17793106-17793161)
[»] chr6 (4 HSPs)
chr6 (84-160)||(29383755-29383831)
chr6 (84-158)||(6794030-6794104)
chr6 (160-216)||(6794125-6794181)
chr6 (160-215)||(29383853-29383908)
[»] scaffold1114 (2 HSPs)
scaffold1114 (84-159)||(2237-2312)
scaffold1114 (160-216)||(2160-2216)
[»] chr3 (9 HSPs)
chr3 (84-159)||(14476999-14477074)
chr3 (84-159)||(22909292-22909367)
chr3 (85-159)||(52669628-52669702)
chr3 (84-159)||(29178705-29178780)
chr3 (84-159)||(4489378-4489453)
chr3 (84-159)||(47180544-47180618)
chr3 (162-216)||(22909213-22909267)
chr3 (163-216)||(14477100-14477153)
chr3 (160-204)||(47180475-47180519)
[»] chr1 (16 HSPs)
chr1 (84-160)||(50270651-50270727)
chr1 (84-159)||(4447883-4447958)
chr1 (84-159)||(14884521-14884596)
chr1 (86-160)||(44574005-44574079)
chr1 (84-159)||(14396108-14396183)
chr1 (84-159)||(23740001-23740075)
chr1 (162-209)||(44574103-44574150)
chr1 (84-152)||(31636392-31636460)
chr1 (84-159)||(23624736-23624811)
chr1 (84-159)||(44415813-44415888)
chr1 (84-154)||(5300357-5300426)
chr1 (160-209)||(23624660-23624709)
chr1 (175-216)||(50270574-50270615)
chr1 (160-216)||(44415729-44415785)
chr1 (162-209)||(4447167-4447214)
chr1 (160-196)||(14884464-14884500)
[»] chr5 (10 HSPs)
chr5 (87-159)||(37194170-37194242)
chr5 (84-159)||(32534744-32534819)
chr5 (84-158)||(39324200-39324274)
chr5 (84-159)||(33207624-33207699)
chr5 (84-159)||(4277525-4277600)
chr5 (163-209)||(4277628-4277674)
chr5 (84-155)||(8433856-8433928)
chr5 (160-209)||(33207720-33207769)
chr5 (160-208)||(32534673-32534721)
chr5 (176-206)||(37194102-37194132)
[»] chr7 (6 HSPs)
chr7 (84-209)||(27816311-27816442)
chr7 (84-159)||(33987674-33987748)
chr7 (163-217)||(33987588-33987642)
chr7 (84-155)||(46209122-46209192)
chr7 (84-159)||(41003496-41003570)
chr7 (162-216)||(46209223-46209277)
[»] chr4 (10 HSPs)
chr4 (84-159)||(2128857-2128932)
chr4 (84-159)||(40046894-40046969)
chr4 (102-160)||(45064096-45064154)
chr4 (84-159)||(39193162-39193236)
chr4 (160-215)||(40046817-40046872)
chr4 (108-159)||(50122630-50122681)
chr4 (160-209)||(50122704-50122753)
chr4 (84-155)||(2062296-2062366)
chr4 (177-216)||(45081657-45081696)
chr4 (84-130)||(40757949-40757995)
[»] scaffold0110 (2 HSPs)
scaffold0110 (160-214)||(26968-27020)
scaffold0110 (84-154)||(26865-26935)
[»] chr2 (2 HSPs)
chr2 (84-152)||(449175-449242)
chr2 (84-147)||(9976740-9976802)


Alignment Details
Target: chr8 (Bit Score: 89; Significance: 6e-43; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 8698996 - 8699180
Alignment:
Q  64 tctcatattgacacataattttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa---- 159  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||        
T  8698996 tctcatattgacatataattttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttttatcttttaagacccttaatttt 8699095  T
Q  160 -----------------acctattagatacgaggtcttaaatgtttaagactcttccattgtggatgttctaagaggtgtaagtt 227  Q
                     ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  8699096 ttttccacaacggggatacctattaggtacgaggtcttaaatgtttaagattctcccattgtggatgttctaagaggtgtaagtt 8699180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 17793263 - 17793188
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  17793263 ttttaataaaaaggtgatgtgtgcccatttaagaatgaggtcttaatttagaccttgcatcttttaagaccctcaa 17793188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 38901359 - 38901434
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| ||||| |||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  38901359 ttttaataaaaaggtgatgtgggtccatttaagaatgaggtcttaatttagacctttcatcttttaagaccctcaa 38901434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 14581331 - 14581406
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| ||| || ||||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  14581331 ttttaataaaaaggtgatgtgagctcatttaagaatgatgtcttaatttagacattgcatattttaagaccctcaa 14581406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 155
Target Start/End: Original strand, 7176802 - 7176873
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtag-tcttaatttagaccttgcatcttttaagaccc 155  Q
    ||||||||||||| ||| |||||| ||||||||||||  | |||||| |||||||||| ||||||||||||||    
T  7176802 ttttaataaaaag-tgatgtgggctcatttaagaatgggggtcttaagttagaccttggatcttttaagaccc 7176873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 8698944 - 8698976
Alignment:
Q  37 taggagcatctacaatattgtagagattctcat 69  Q
    |||||||||||||||||||||||||||||||||    
T  8698944 taggagcatctacaatattgtagagattctcat 8698976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 14729024 - 14729094
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaat-gtagtcttaatttagaccttgcatcttttaagacc 154  Q
    ||||||||||||| ||| |||||||||||||||||| |  ||||||| |||||| ||| |||||||||||||    
T  14729024 ttttaataaaaag-tgatgtgggcccatttaagaatgggggtcttaagttagacattggatcttttaagacc 14729094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 17793161 - 17793106
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactcttccattgtggatgttctaa 215  Q
    ||||||||| ||| | ||||||||||||||||||| | |||||||||||| |||||    
T  17793161 acctattaggtaccatgtcttaaatgtttaagactatcccattgtggatgctctaa 17793106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 29383755 - 29383831
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaaa 160  Q
    |||||||||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  29383755 ttttaataaaaaggtgatatgggcccatttaagaatgatgtcttaatttagaccttgcatcttttaagaccctcaaa 29383831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 6794030 - 6794104
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctca 158  Q
    |||||||||||||||   ||||| |||||||||||||  |||||| |||||||||||||||||||||| ||||||    
T  6794030 ttttaataaaaaggtagtgtgggtccatttaagaatgaggtcttagtttagaccttgcatcttttaaggccctca 6794104  T

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Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 6794125 - 6794181
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactcttccattgtggatgttctaag 216  Q
    ||||||||| ||| |||||||||||||||||||| || |||||||||||| ||||||    
T  6794125 acctattaggtaccaggtcttaaatgtttaagaccctcccattgtggatgctctaag 6794181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 29383853 - 29383908
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactcttccattgtggatgttctaa 215  Q
    ||||||||| ||| | ||||||||||||||||||||| |||||||||||| |||||    
T  29383853 acctattaggtaccacgtcttaaatgtttaagactctcccattgtggatgctctaa 29383908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 2312 - 2237
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  2312 ttttaataaaaaggtgatgtgggcccatttaagaatgaggtcttaatttagactttgcatcttttaagaccctcaa 2237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 2216 - 2160
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactcttccattgtggatgttctaag 216  Q
    ||||||||  ||| |||||||||||||||||||||||||  ||||||||| ||||||    
T  2216 acctattatgtaccaggtcttaaatgtttaagactcttcttttgtggatgatctaag 2160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 14476999 - 14477074
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  14476999 ttttaataaaaagatgatgtgggcccatttaagaatgaggtcttaatttagaccttgcatcttttaagaccctcaa 14477074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 22909367 - 22909292
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| ||||| | |||||||||||  ||||||||||||||||||||||||||||  |||||||    
T  22909367 ttttaataaaaaggtgatgtgggtctatttaagaatgaggtcttaatttagaccttgcatcttttaaatccctcaa 22909292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 85 - 159
Target Start/End: Complemental strand, 52669702 - 52669628
Alignment:
Q  85 tttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    |||||| ||||||||| |||||||||||||||||||  |||||||||||||||||| || |||||||||| ||||    
T  52669702 tttaatgaaaaggtgatgtgggcccatttaagaatgaggtcttaatttagaccttgtattttttaagaccttcaa 52669628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 29178705 - 29178780
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| ||||  |||||||||||||   ||||||||||||||||| ||||||||| | ||||||    
T  29178705 ttttaataaaaaggtgatgtggatccatttaagaatgatatcttaatttagaccttgtatcttttaaaatcctcaa 29178780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 4489453 - 4489378
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||| | |   |||||||||||||||  ||||||||||| ||||||||| |||||||| ||||||    
T  4489453 ttttaataaaaaggtaatgatagcccatttaagaatgaggtcttaatttaaaccttgcattttttaagatcctcaa 4489378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 47180618 - 47180544
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttag-accttgcatcttttaagaccctcaa 159  Q
    |||||||||||| |||| ||||  |||||||||||||  ||||||||  || |||||||||||||||||||||||||    
T  47180618 ttttaataaaaatgtgatgtggatccatttaagaatgaggtcttaat--agtaccttgcatcttttaagaccctcaa 47180544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 22909267 - 22909213
Alignment:
Q  162 ctattagatacgaggtcttaaatgtttaagactcttccattgtggatgttctaag 216  Q
    ||||||| ||| ||||||||||| ||||||||||| ||||||| |||| ||||||    
T  22909267 ctattaggtaccaggtcttaaatatttaagactctcccattgtagatgctctaag 22909213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 14477100 - 14477153
Alignment:
Q  163 tattagatacgaggtcttaaatgtttaagactcttccattgtggatgttctaag 216  Q
    |||||| |||  ||||||||||||| |||||||| |||||||||||| ||||||    
T  14477100 tattaggtaccgggtcttaaatgttgaagactctcccattgtggatgctctaag 14477153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 47180519 - 47180475
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactcttccattgt 204  Q
    ||||||||||||  || |||||||||||||||||||| |||||||    
T  47180519 acctattagatatcagatcttaaatgtttaagactctcccattgt 47180475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 50270727 - 50270651
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaaa 160  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||    
T  50270727 ttttaataaaaaggtgatgtgggcccatttaagaatgatgtcttaatttaaaccttgcatcttttaaaaccctcaaa 50270651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 4447958 - 4447883
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    |||||||||||| |||| |||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  4447958 ttttaataaaaaagtgatgtgggcccatttaagaatgaggtcttaatttagactttgcatcttttaagaccctcaa 4447883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 14884596 - 14884521
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| |||||| ||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  14884596 ttttaataaaaaggtgatgtgggcacatttaagaatgatgtcttaatttaaaccttgcatcttttaagaccctcaa 14884521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 44574005 - 44574079
Alignment:
Q  86 ttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaaa 160  Q
    ||||||||||||||| ||| |||||||||| ||||  ||||||||||||||||| |||||||||||| |||||||    
T  44574005 ttaataaaaaggtgatgtgagcccatttaaaaatgaggtcttaatttagaccttacatcttttaagatcctcaaa 44574079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 14396108 - 14396183
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||| |||||  |||| ||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  14396108 ttttattaaaatagtgatgtgagcccatttaagaatgaggtcttaatttagacattgcatcttttaagaccctcaa 14396183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 23740075 - 23740001
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| |||||||||||||| ||||   |||||||||||||||| |||||||| ||||||||||    
T  23740075 ttttaataaaaaggtgatgtgggcccatttaaaaatgagatcttaatttagacctt-catcttttcagaccctcaa 23740001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 44574103 - 44574150
Alignment:
Q  162 ctattagatacgaggtcttaaatgtttaagactcttccattgtggatg 209  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44574103 ctattagatacgaggtcttaaatatttaagactcttccattgtggatg 44574150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 31636460 - 31636392
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaaga 152  Q
    |||| |||||||||||| |||  ||||||||||||||  ||||||||||||||||| ||||||||||||    
T  31636460 tttttataaaaaggtgatgtgaacccatttaagaatgaggtcttaatttagaccttacatcttttaaga 31636392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 23624811 - 23624736
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    |||||||||||| |||| ||||||| |||||||||||  ||| ||||||||||||| |||||||| | ||||||||    
T  23624811 ttttaataaaaaagtgatgtgggccaatttaagaatgaggtcataatttagaccttccatcttttcaaaccctcaa 23624736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 44415888 - 44415813
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    |||||||||||| |||| ||||   ||||||||||||  ||||||||||| || ||||||||||||||||||||||    
T  44415888 ttttaataaaaatgtgatgtggattcatttaagaatgaggtcttaatttatactttgcatcttttaagaccctcaa 44415813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 5300426 - 5300357
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagacc 154  Q
    ||||||||||||| ||| ||| |||||||||||||||  ||||||| |||||||||| |||||||||||||    
T  5300426 ttttaataaaaag-tgatgtgagcccatttaagaatggggtcttaagttagaccttgtatcttttaagacc 5300357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 23624709 - 23624660
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactcttccattgtggatg 209  Q
    ||||||||| ||  ||||||||||||||||||||||| ||||||||||||    
T  23624709 acctattaggtatcaggtcttaaatgtttaagactctcccattgtggatg 23624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 50270615 - 50270574
Alignment:
Q  175 ggtcttaaatgtttaagactcttccattgtggatgttctaag 216  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  50270615 ggtcttaaatgtttaagactctcccattgtggatgctctaag 50270574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 44415785 - 44415729
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactcttccattgtggatgttctaag 216  Q
    ||||||||| ||  ||||||||||||||||||||||| ||| |||||||| ||||||    
T  44415785 acctattaggtatcaggtcttaaatgtttaagactctcccactgtggatgctctaag 44415729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 4447214 - 4447167
Alignment:
Q  162 ctattagatacgaggtcttaaatgtttaagactcttccattgtggatg 209  Q
    ||||||| ||| | ||||||||||||||||||||| ||||||||||||    
T  4447214 ctattaggtaccaagtcttaaatgtttaagactctcccattgtggatg 4447167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 14884500 - 14884464
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactct 196  Q
    ||||||||||||| || ||||||||||||||||||||    
T  14884500 acctattagataccagatcttaaatgtttaagactct 14884464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 37194242 - 37194170
Alignment:
Q  87 taataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    |||||||||||| |||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||||    
T  37194242 taataaaaaggtaacgtggacccatttaagaatgacgtcttaatttagaccttgcatcatttaagaccctcaa 37194170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 32534819 - 32534744
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| ||||||| ||||||||||   ||||||||||||||||| |||||||||||||| ||||    
T  32534819 ttttaataaaaaggtgatgtgggccaatttaagaataaggtcttaatttagaccttacatcttttaagaccttcaa 32534744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 39324200 - 39324274
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctca 158  Q
    ||||||||||||||||  ||||| ||||||||||||| | ||||||||||||  |||||||||||||||||||||    
T  39324200 ttttaataaaaaggtggtgtgggtccatttaagaatgaaatcttaatttagaatttgcatcttttaagaccctca 39324274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 33207624 - 33207699
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| ||||  ||||||||||||| ||| |||||||||||||| ||| |||||||| ||||||    
T  33207624 ttttaataaaaaggtgatgtggatccatttaagaatgaagttttaatttagacctttcatattttaagatcctcaa 33207699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 4277525 - 4277600
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    |||||||||||| |||| ||||  |||||||||||||  ||||||||| ||| ||| |||||||||||||||||||    
T  4277525 ttttaataaaaaagtgatgtggatccatttaagaatgaggtcttaattaagaacttccatcttttaagaccctcaa 4277600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 4277628 - 4277674
Alignment:
Q  163 tattagatacgaggtcttaaatgtttaagactcttccattgtggatg 209  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||    
T  4277628 tattaggtacgaggtcttatatgtttaagactcttccattgtggatg 4277674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 155
Target Start/End: Original strand, 8433856 - 8433928
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtag--tcttaatttagaccttgcatcttttaagaccc 155  Q
    ||||||||||||| ||| ||| ||||||||||||||| ||  |||||| |||||||||| ||||||||||||||    
T  8433856 ttttaataaaaag-tgatgtgagcccatttaagaatgaaggatcttaagttagaccttggatcttttaagaccc 8433928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 33207720 - 33207769
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactcttccattgtggatg 209  Q
    ||||||||| ||| ||||||||||||||||| |||||||||| |||||||    
T  33207720 acctattaggtaccaggtcttaaatgtttaaaactcttccatcgtggatg 33207769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 32534721 - 32534673
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactcttccattgtggat 208  Q
    ||||||||  ||| ||||||||||||||||||||||||| |||||||||    
T  32534721 acctattaagtactaggtcttaaatgtttaagactcttcaattgtggat 32534673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 206
Target Start/End: Complemental strand, 37194132 - 37194102
Alignment:
Q  176 gtcttaaatgtttaagactcttccattgtgg 206  Q
    |||||||||||||||||||||||||||||||    
T  37194132 gtcttaaatgtttaagactcttccattgtgg 37194102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 209
Target Start/End: Complemental strand, 27816442 - 27816311
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa------acctattagatacgaggt 177  Q
    ||||||||||||||||| ||||||||| |||||||||   ||||||||||||||||||||||||||| | ||||||       | |||||| ||| | ||    
T  27816442 ttttaataaaaaggtgatgtgggcccaattaagaatgatatcttaatttagaccttgcatcttttaaaatcctcaatttttttcgtattaggtaccatgt 27816343  T
Q  178 cttaaatgtttaagactcttccattgtggatg 209  Q
    ||||||| |||||| ||| |||||||||||||    
T  27816342 cttaaatatttaagcctcctccattgtggatg 27816311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 33987748 - 33987674
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||||| |||||| ||||    
T  33987748 ttttaataaaaag-tgatgtgggcccatttaagaatgatgtcttaatttagaccttgcatctttcaagaccatcaa 33987674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 33987642 - 33987588
Alignment:
Q  163 tattagatacgaggtcttaaatgtttaagactcttccattgtggatgttctaaga 217  Q
    |||||||||| || |||||||||||||||||| |||||||||||||| |||||||    
T  33987642 tattagataccagatcttaaatgtttaagactattccattgtggatgctctaaga 33987588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 155
Target Start/End: Original strand, 46209122 - 46209192
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccc 155  Q
    ||||||||||||| ||| ||||  |||||||||||||  ||||||| |||||||||| ||||||||||||||    
T  46209122 ttttaataaaaag-tgatgtggatccatttaagaatgaggtcttaaattagaccttggatcttttaagaccc 46209192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 41003496 - 41003570
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||| ||||||||||| |||| ||||||||| ||||  ||||||||||| || ||| || |||||||||||||||    
T  41003496 ttttagtaaaaaggtgatgtggacccatttaaaaatgaggtcttaatttaaacattgtat-ttttaagaccctcaa 41003570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 46209223 - 46209277
Alignment:
Q  162 ctattagatacgaggtcttaaatgtttaagactcttccattgtggatgttctaag 216  Q
    |||||||||||||||||||||||| |||| |||   |||||||||||| ||||||    
T  46209223 ctattagatacgaggtcttaaatgattaaaacttcaccattgtggatgctctaag 46209277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 2128932 - 2128857
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| |||||||  ||||||||||  ||||||||||| || ||||||||||||||||||||||    
T  2128932 ttttaataaaaaggtgatgtgggccagtttaagaatgatgtcttaatttaaactttgcatcttttaagaccctcaa 2128857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 40046969 - 40046894
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| ||| ||| |||||||||||   |||||||||||| |||||||||||||||||||||||    
T  40046969 ttttaataaaaaggtgatgtgagccaatttaagaatgagatcttaatttagatcttgcatcttttaagaccctcaa 40046894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 45064154 - 45064096
Alignment:
Q  102 gtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaaa 160  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||    
T  45064154 gtgggcctatttaagaatgatgtcttaatttagaccttgcatcttttaagactctcaaa 45064096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 39193236 - 39193162
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||||||| |||| || |||||||||||  ||||||||||||| |||  ||||||||||||||||||    
T  39193236 ttttaataaaaaggtgatgtggtcctatttaagaatgaggtcttaatttaga-cttaaatcttttaagaccctcaa 39193162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 40046872 - 40046817
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactcttccattgtggatgttctaa 215  Q
    ||||||||| ||||||||||||| | |||||||||||||||||||| |||||||||    
T  40046872 acctattaggtacgaggtcttaattatttaagactcttccattgtgaatgttctaa 40046817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 50122630 - 50122681
Alignment:
Q  108 ccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccctcaa 159  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  50122630 ccatttaagaatgaagtcttaatttaaaccctgcatcttttaagaccctcaa 50122681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 50122704 - 50122753
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactcttccattgtggatg 209  Q
    ||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  50122704 acctaataggtacgagatcttaaatgtttaagactcttccattgtggatg 50122753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 2062366 - 2062296
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagaccc 155  Q
    ||||||||||||| ||||||| |||||||||||||||  || |||| |||||||||  ||||||||| ||||    
T  2062366 ttttaataaaaag-tgacgtgagcccatttaagaatgaggttttaagttagacctttgatcttttaaaaccc 2062296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 45081657 - 45081696
Alignment:
Q  177 tcttaaatgtttaagactcttccattgtggatgttctaag 216  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  45081657 tcttaaatggttaagactcttctattgtggatgttctaag 45081696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 40757949 - 40757995
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaat 130  Q
    ||||||||||||||||| |||| ||||||||||||||  ||||||||    
T  40757949 ttttaataaaaaggtgatgtggacccatttaagaatgaggtcttaat 40757995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 26968 - 27020
Alignment:
Q  160 acctattagatacgaggtcttaaatgtttaagactcttccattgtggatgttcta 214  Q
    ||||||||||||| || |||||||||||||  |||||||||||||||||||||||    
T  26968 acctattagatactagatcttaaatgttta--actcttccattgtggatgttcta 27020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 26865 - 26935
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaagacc 154  Q
    ||||||||||||||||| |||| ||||||||| ||||   |||||||||| || || ||||||||||||||    
T  26865 ttttaataaaaaggtgatgtggacccatttaaaaatgagatcttaatttaaactttacatcttttaagacc 26935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 449175 - 449242
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttttaaga 152  Q
    ||||||||||||| ||| |||  ||||||||||||||  ||||||| |||||||||| |||||||||||    
T  449175 ttttaataaaaag-tgatgtgaacccatttaagaatggggtcttaagttagaccttggatcttttaaga 449242  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 9976740 - 9976802
Alignment:
Q  84 ttttaataaaaaggtgacgtgggcccatttaagaatgtagtcttaatttagaccttgcatcttt 147  Q
    ||||||||||||| |||  ||| ||||||||||||||  |||||||||||||||||| ||||||    
T  9976740 ttttaataaaaag-tgatatggacccatttaagaatgaggtcttaatttagaccttggatcttt 9976802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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