View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10492_low_11 (Length: 320)
Name: NF10492_low_11
Description: NF10492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10492_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 49126135 - 49126426
Alignment:
| Q |
1 |
gctgctcagtttttcatctcacttttgaaaaggtgtcaactccgatccatgtagccaactccatcagccagagagtctgtgtaaaagctacaaaatctta |
100 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |
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| T |
49126135 |
gctgctcagtttttcatctcgcttttgaaaaggtgtcaactccgatccatgtagccaacttcgtcagtcagagagtctgtgtaaaagctacaaaatctta |
49126234 |
T |
|
| Q |
101 |
gttgtctgttacatgcgtttagatgttccaagcaaggatttcttatatcaaaattcagtagctgttacataggctttttgacagacggagttagcgataa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
49126235 |
gttgtctgttacatgcgtttagatgttccaagcaaggatttcttatatcaaaattcagtagctgttacataggctttttgacagacggagttagctataa |
49126334 |
T |
|
| Q |
201 |
ggtccaaaactgaaacattttcataaatgagaaacccaaatgtga---gnnnnnnnntgaaaattatcatattttgagggacaacagacata |
289 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |
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| T |
49126335 |
ggtccaaaactgaaacattttcataaatgagaaacccaaatgtgaaagaaaaaaaaatgaaaattatcatattttgagggacaacggacata |
49126426 |
T |
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