View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10493_high_13 (Length: 255)
Name: NF10493_high_13
Description: NF10493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10493_high_13 |
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Alignment Details
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 25025412 - 25025632
Alignment:
| Q |
18 |
aataagacaaacaagtttatagattatagaaaagatgaataaattaatcgaatgcgtgcgttcaatttaatctcttagggaacnnnnnnnctgttgcatt |
117 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
25025412 |
aataagacaaacaagtttatagattatagaaaaaatgaataaattaatcgaatgcgtgcgttcaatttaatctcttagggaacaaaaaaactgttgcatt |
25025511 |
T |
|
| Q |
118 |
gcgttcatctaagcatggaatttgatgttataattagaataactagaaattgtatgactgacataccaatcagtgtttggatccaagttactttgatttt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25025512 |
gcgttcatctaagcatggaatttgatgttataattagaataactagaaattgtatgactgacataccaatcagtgtttggatccaagttactttgatttt |
25025611 |
T |
|
| Q |
218 |
tattttacttttcattctctg |
238 |
Q |
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||||||| ||||||||||||| |
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| T |
25025612 |
tattttatttttcattctctg |
25025632 |
T |
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