View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10496_high_20 (Length: 251)

Name: NF10496_high_20
Description: NF10496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10496_high_20
NF10496_high_20
[»] chr2 (31 HSPs)
chr2 (16-251)||(37992393-37992626)
chr2 (104-172)||(29034968-29035037)
chr2 (104-171)||(44487801-44487868)
chr2 (104-168)||(580817-580881)
chr2 (125-165)||(25071210-25071250)
chr2 (104-150)||(20972855-20972901)
chr2 (105-167)||(36665428-36665490)
chr2 (104-172)||(34034343-34034411)
chr2 (105-168)||(2935813-2935877)
chr2 (104-168)||(20122509-20122573)
chr2 (104-168)||(30474229-30474293)
chr2 (104-159)||(32527111-32527167)
chr2 (121-171)||(29664596-29664647)
chr2 (121-168)||(38807878-38807925)
chr2 (106-173)||(39334917-39334984)
chr2 (104-166)||(8080704-8080766)
chr2 (104-166)||(22297486-22297548)
chr2 (121-171)||(34107268-34107318)
chr2 (103-168)||(2558291-2558356)
chr2 (104-172)||(11133068-11133137)
chr2 (104-172)||(21970473-21970542)
chr2 (121-174)||(22355074-22355127)
chr2 (107-171)||(43870946-43871011)
chr2 (123-171)||(6282229-6282277)
chr2 (104-168)||(7086250-7086314)
chr2 (104-168)||(8234826-8234890)
chr2 (104-168)||(10262736-10262800)
chr2 (104-179)||(12206486-12206559)
chr2 (104-168)||(17154646-17154710)
chr2 (128-172)||(30736968-30737012)
chr2 (119-167)||(34376540-34376588)
[»] chr7 (48 HSPs)
chr7 (104-173)||(48174959-48175028)
chr7 (104-168)||(30644166-30644230)
chr7 (104-172)||(35195836-35195904)
chr7 (122-172)||(7392358-7392408)
chr7 (104-168)||(5787458-5787522)
chr7 (104-168)||(7465463-7465527)
chr7 (107-174)||(38363150-38363217)
chr7 (104-173)||(41417309-41417379)
chr7 (104-172)||(29658306-29658375)
chr7 (107-167)||(2261521-2261581)
chr7 (104-171)||(15912768-15912836)
chr7 (104-171)||(20527463-20527531)
chr7 (104-171)||(21285387-21285455)
chr7 (104-168)||(22965992-22966056)
chr7 (105-173)||(45267961-45268029)
chr7 (104-170)||(26801735-26801801)
chr7 (105-168)||(36316009-36316072)
chr7 (104-173)||(14818399-14818469)
chr7 (104-173)||(15265397-15265467)
chr7 (105-171)||(27726404-27726470)
chr7 (106-168)||(29778978-29779040)
chr7 (107-176)||(34960957-34961027)
chr7 (121-171)||(37917386-37917436)
chr7 (104-168)||(31475874-31475939)
chr7 (107-171)||(41139080-41139145)
chr7 (123-167)||(8147239-8147283)
chr7 (104-168)||(11808035-11808099)
chr7 (104-172)||(16814690-16814758)
chr7 (107-167)||(32814825-32814885)
chr7 (104-172)||(43635581-43635649)
chr7 (104-168)||(44437859-44437923)
chr7 (121-168)||(10958036-10958083)
chr7 (106-172)||(24304319-24304386)
chr7 (105-164)||(27047750-27047809)
chr7 (104-166)||(8725172-8725233)
chr7 (104-166)||(47552212-47552274)
chr7 (103-172)||(1649145-1649214)
chr7 (107-168)||(8195912-8195973)
chr7 (122-159)||(19924773-19924810)
chr7 (110-167)||(32834343-32834400)
chr7 (104-165)||(41012615-41012676)
chr7 (125-166)||(48088629-48088670)
chr7 (104-164)||(23685588-23685648)
chr7 (103-155)||(24396955-24397007)
chr7 (104-168)||(25818283-25818347)
chr7 (104-168)||(30741561-30741625)
chr7 (103-170)||(33996886-33996953)
chr7 (115-155)||(43209411-43209451)
[»] chr8 (35 HSPs)
chr8 (104-171)||(41793007-41793073)
chr8 (104-171)||(2800012-2800080)
chr8 (104-168)||(4798575-4798639)
chr8 (104-171)||(21133553-21133621)
chr8 (104-172)||(2696525-2696594)
chr8 (104-168)||(9524954-9525018)
chr8 (121-165)||(11900566-11900610)
chr8 (104-168)||(15042399-15042463)
chr8 (104-168)||(24608517-24608581)
chr8 (105-172)||(29937203-29937270)
chr8 (105-171)||(14011073-14011139)
chr8 (106-164)||(20784688-20784745)
chr8 (106-172)||(32940350-32940416)
chr8 (104-166)||(43847701-43847763)
chr8 (107-168)||(39484407-39484468)
chr8 (105-172)||(1588759-1588827)
chr8 (103-167)||(6372636-6372700)
chr8 (104-168)||(17980279-17980343)
chr8 (104-168)||(17987483-17987547)
chr8 (121-173)||(39432379-39432431)
chr8 (121-168)||(7345425-7345472)
chr8 (104-139)||(8034556-8034591)
chr8 (121-171)||(10292345-10292396)
chr8 (107-173)||(14012603-14012670)
chr8 (105-172)||(25470881-25470948)
chr8 (115-173)||(38790618-38790677)
chr8 (104-170)||(26657851-26657917)
chr8 (121-159)||(29653060-29653098)
chr8 (125-162)||(34089577-34089614)
chr8 (104-168)||(1032994-1033058)
chr8 (104-167)||(7314730-7314794)
chr8 (105-168)||(23857358-23857422)
chr8 (104-168)||(25119205-25119269)
chr8 (107-139)||(34632020-34632052)
chr8 (106-174)||(44254348-44254416)
[»] chr4 (48 HSPs)
chr4 (105-172)||(41492533-41492600)
chr4 (104-168)||(27921893-27921957)
chr4 (104-171)||(28520765-28520833)
chr4 (104-172)||(54854213-54854281)
chr4 (104-174)||(9692952-9693023)
chr4 (105-168)||(52560761-52560824)
chr4 (105-168)||(56546484-56546547)
chr4 (104-173)||(14149784-14149854)
chr4 (104-172)||(53815688-53815757)
chr4 (106-174)||(20610730-20610798)
chr4 (104-168)||(20753159-20753223)
chr4 (104-171)||(36008268-36008336)
chr4 (104-168)||(47017980-47018044)
chr4 (104-171)||(48968244-48968312)
chr4 (104-172)||(49039479-49039547)
chr4 (104-171)||(20166310-20166377)
chr4 (104-171)||(36257688-36257755)
chr4 (104-166)||(35031382-35031444)
chr4 (122-174)||(30152118-30152171)
chr4 (104-168)||(9285693-9285757)
chr4 (122-169)||(34106597-34106645)
chr4 (121-173)||(38657532-38657584)
chr4 (104-171)||(40150466-40150534)
chr4 (104-171)||(42411488-42411556)
chr4 (104-172)||(49743355-49743423)
chr4 (103-170)||(49757289-49757356)
chr4 (105-168)||(33944398-33944461)
chr4 (121-172)||(36045823-36045874)
chr4 (104-170)||(36132227-36132293)
chr4 (121-168)||(43049984-43050031)
chr4 (105-136)||(46482852-46482883)
chr4 (104-171)||(49319387-49319454)
chr4 (121-171)||(12796660-12796710)
chr4 (105-167)||(32885686-32885748)
chr4 (126-168)||(35379251-35379293)
chr4 (104-168)||(36954132-36954198)
chr4 (103-165)||(42758197-42758258)
chr4 (107-168)||(548924-548985)
chr4 (106-159)||(6053986-6054039)
chr4 (122-171)||(8241425-8241474)
chr4 (103-172)||(15853815-15853884)
chr4 (104-168)||(33076529-33076591)
chr4 (121-173)||(48512190-48512243)
chr4 (104-168)||(52031203-52031268)
chr4 (104-168)||(3465580-3465644)
chr4 (104-171)||(8690207-8690275)
chr4 (104-168)||(13211386-13211450)
chr4 (104-168)||(24234108-24234172)
[»] chr1 (47 HSPs)
chr1 (104-172)||(17350053-17350122)
chr1 (104-172)||(25819177-25819246)
chr1 (104-172)||(9768843-9768911)
chr1 (108-172)||(18003809-18003873)
chr1 (104-179)||(39238701-39238777)
chr1 (105-179)||(47763420-47763495)
chr1 (104-171)||(52961116-52961183)
chr1 (104-173)||(38021243-38021313)
chr1 (108-173)||(40678814-40678880)
chr1 (104-173)||(18179320-18179389)
chr1 (104-172)||(29491462-29491531)
chr1 (104-172)||(1721133-1721201)
chr1 (104-171)||(2052716-2052784)
chr1 (104-168)||(21884572-21884636)
chr1 (104-159)||(3341770-3341825)
chr1 (104-171)||(9931081-9931148)
chr1 (107-168)||(38019985-38020046)
chr1 (106-171)||(42908765-42908830)
chr1 (111-171)||(4511566-4511626)
chr1 (104-172)||(7906360-7906428)
chr1 (106-166)||(24014644-24014704)
chr1 (104-168)||(27745154-27745218)
chr1 (106-165)||(4354141-4354200)
chr1 (104-167)||(24168613-24168676)
chr1 (121-168)||(24661979-24662026)
chr1 (104-158)||(15368812-15368866)
chr1 (104-173)||(19976586-19976656)
chr1 (104-141)||(1660967-1661004)
chr1 (103-171)||(9527419-9527488)
chr1 (103-164)||(9951486-9951547)
chr1 (103-168)||(23930577-23930642)
chr1 (104-172)||(35111642-35111710)
chr1 (121-174)||(43020602-43020655)
chr1 (103-168)||(43837434-43837499)
chr1 (122-171)||(51917554-51917603)
chr1 (104-168)||(52833140-52833205)
chr1 (104-168)||(538363-538427)
chr1 (123-171)||(2643868-2643916)
chr1 (103-167)||(4429515-4429579)
chr1 (105-141)||(6616747-6616783)
chr1 (107-171)||(11238065-11238129)
chr1 (115-167)||(12553191-12553243)
chr1 (104-168)||(20357457-20357521)
chr1 (104-168)||(20562434-20562498)
chr1 (104-164)||(23464020-23464080)
chr1 (120-172)||(29442017-29442069)
chr1 (103-170)||(43884792-43884859)
[»] chr5 (33 HSPs)
chr5 (105-173)||(40250212-40250280)
chr5 (104-171)||(3535970-3536037)
chr5 (104-171)||(1463864-1463932)
chr5 (104-168)||(32158448-32158512)
chr5 (104-171)||(25660906-25660973)
chr5 (105-171)||(7147054-7147120)
chr5 (104-174)||(28537126-28537196)
chr5 (103-165)||(29106071-29106133)
chr5 (103-172)||(37303926-37303996)
chr5 (105-179)||(40339134-40339207)
chr5 (103-168)||(19059037-19059102)
chr5 (107-168)||(20945928-20945989)
chr5 (105-168)||(6447515-6447579)
chr5 (104-168)||(9577299-9577363)
chr5 (121-173)||(11246545-11246597)
chr5 (104-168)||(18872518-18872582)
chr5 (104-168)||(33800890-33800954)
chr5 (104-160)||(42455428-42455484)
chr5 (121-171)||(9963409-9963460)
chr5 (103-166)||(18478002-18478065)
chr5 (104-171)||(31556812-31556879)
chr5 (103-181)||(37417162-37417241)
chr5 (121-167)||(20186864-20186910)
chr5 (121-171)||(38040260-38040310)
chr5 (106-171)||(19608607-19608672)
chr5 (107-171)||(20735212-20735277)
chr5 (104-165)||(29096342-29096403)
chr5 (121-170)||(35813293-35813342)
chr5 (104-168)||(36045168-36045233)
chr5 (104-171)||(4674849-4674917)
chr5 (104-168)||(42595738-42595802)
chr5 (104-160)||(42781628-42781684)
chr5 (115-151)||(43185211-43185247)
[»] scaffold0168 (1 HSPs)
scaffold0168 (107-174)||(34070-34137)
[»] chr6 (24 HSPs)
chr6 (104-171)||(10455736-10455803)
chr6 (104-172)||(9064858-9064927)
chr6 (103-171)||(14981735-14981804)
chr6 (108-172)||(34524868-34524932)
chr6 (104-174)||(3448342-3448413)
chr6 (104-168)||(10377158-10377222)
chr6 (104-168)||(12089094-12089158)
chr6 (106-171)||(11520711-11520776)
chr6 (121-177)||(22730753-22730809)
chr6 (121-172)||(4844136-4844187)
chr6 (103-170)||(12341416-12341483)
chr6 (123-170)||(19135924-19135971)
chr6 (104-171)||(26669693-26669760)
chr6 (104-171)||(30833011-30833078)
chr6 (121-174)||(2945586-2945640)
chr6 (126-172)||(6219347-6219393)
chr6 (121-171)||(9031760-9031810)
chr6 (104-150)||(19680282-19680328)
chr6 (118-168)||(31411109-31411159)
chr6 (106-171)||(8175990-8176055)
chr6 (103-171)||(2955137-2955205)
chr6 (104-171)||(6143958-6144025)
chr6 (104-168)||(9491769-9491833)
chr6 (104-171)||(24470425-24470493)
[»] chr3 (43 HSPs)
chr3 (104-171)||(19137613-19137680)
chr3 (104-174)||(27183715-27183786)
chr3 (104-173)||(9624974-9625044)
chr3 (104-171)||(14868678-14868746)
chr3 (104-164)||(51017791-51017851)
chr3 (105-172)||(16874225-16874292)
chr3 (104-172)||(43774177-43774246)
chr3 (104-167)||(36331760-36331824)
chr3 (104-171)||(36476352-36476420)
chr3 (104-171)||(47191366-47191434)
chr3 (106-173)||(5164189-5164256)
chr3 (106-173)||(26583093-26583160)
chr3 (121-171)||(12236593-12236643)
chr3 (108-166)||(34503214-34503272)
chr3 (104-172)||(10959125-10959194)
chr3 (104-164)||(14417869-14417929)
chr3 (104-168)||(24751294-24751358)
chr3 (104-168)||(33206754-33206818)
chr3 (124-172)||(40160728-40160776)
chr3 (104-168)||(49639025-49639089)
chr3 (104-171)||(52030114-52030182)
chr3 (121-168)||(16278002-16278049)
chr3 (105-168)||(17440000-17440063)
chr3 (104-159)||(20244140-20244195)
chr3 (104-171)||(31108794-31108861)
chr3 (104-170)||(49447136-49447202)
chr3 (105-139)||(31698559-31698593)
chr3 (126-168)||(38507645-38507687)
chr3 (121-174)||(41767819-41767873)
chr3 (106-168)||(42271049-42271111)
chr3 (125-167)||(48659874-48659916)
chr3 (122-156)||(53598977-53599011)
chr3 (121-170)||(6951841-6951890)
chr3 (106-159)||(23237368-23237421)
chr3 (104-173)||(24130551-24130620)
chr3 (121-168)||(3955302-3955350)
chr3 (107-171)||(4478405-4478469)
chr3 (104-168)||(13539998-13540062)
chr3 (106-150)||(16999943-16999987)
chr3 (104-164)||(19540342-19540402)
chr3 (121-173)||(47497079-47497131)
chr3 (104-171)||(49443429-49443496)
chr3 (107-159)||(51412027-51412079)
[»] scaffold0036 (1 HSPs)
scaffold0036 (104-171)||(25019-25087)
[»] scaffold0002 (1 HSPs)
scaffold0002 (108-160)||(440404-440456)
[»] scaffold0308 (1 HSPs)
scaffold0308 (104-171)||(7069-7137)
[»] scaffold0227 (1 HSPs)
scaffold0227 (104-171)||(21843-21911)
[»] scaffold0112 (1 HSPs)
scaffold0112 (104-171)||(17965-18033)
[»] scaffold0039 (1 HSPs)
scaffold0039 (104-168)||(101828-101892)
[»] scaffold0809 (1 HSPs)
scaffold0809 (121-171)||(4856-4907)
[»] scaffold0712 (1 HSPs)
scaffold0712 (121-172)||(4513-4564)
[»] scaffold0709 (1 HSPs)
scaffold0709 (121-172)||(4533-4584)
[»] scaffold0334 (1 HSPs)
scaffold0334 (104-159)||(5310-5364)
[»] scaffold0119 (1 HSPs)
scaffold0119 (104-171)||(1033-1100)
[»] scaffold0009 (1 HSPs)
scaffold0009 (121-159)||(108412-108451)
[»] scaffold0126 (1 HSPs)
scaffold0126 (103-171)||(24994-25062)


Alignment Details
Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 37992393 - 37992626
Alignment:
Q  16 gaccatcagaaacatatttggttgttatttaacttttctctttttaaatagaaaacaaaatagnnnnnnnnnnngtcaagtaatctaagggttcgaacac 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||| |||||    
T  37992393 gaccataagaaacatatttggttgttatttaacttttctctttttaaatagaaaacaaaatagtttttttttt-gtcaagtaatctaagggttcaaacac 37992491  T
Q  116 cggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaaacaaaatagtgtttattagtacatgatgtataccannnnnnn 215  Q
    |||||||| |||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||| || |||||||| |           
T  37992492 cggctcct-catataataatgcatgtttctgccaactgagatatactcacggggacaaacaaaatagtgtttattagtatataatgtatacgattttttt 37992590  T
Q  216 ataagtctctttagttaaaatgattggttatatttg 251  Q
    ||||||||||||||||||||||||||||||||||||    
T  37992591 ataagtctctttagttaaaatgattggttatatttg 37992626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 29035037 - 29034968
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| |||||||| ||||||||||||    
T  29035037 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaagtgagctatgctcacggggaca 29034968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 44487801 - 44487868
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| | ||||||||||||||||||| |||  ||| ||||||||||||||||||||    
T  44487801 gggttcgaactccggcccttgcatataataatgcatgtccctatcaactgagctatactcacggggac 44487868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 580817 - 580881
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  580817 gggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 580881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 25071250 - 25071210
Alignment:
Q  125 catataataatgcatgttcctgccaattgagctatactcac 165  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  25071250 catataataatgcatgtccctgccaattgagctatactcac 25071210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 20972855 - 20972901
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaa 150  Q
    |||||||||| ||||||||||||||||||||||||||| | ||||||    
T  20972855 gggttcgaactccggctcctgcatataataatgcatgtccatgccaa 20972901  T

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Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 36665490 - 36665428
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    ||||||||| ||||| |||||||||||||||||||  |||| | || ||||||||||||||||    
T  36665490 ggttcgaaccccggcccctgcatataataatgcattgtcctacaaactgagctatactcacgg 36665428  T

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Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 34034411 - 34034343
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| |||| ||||||||||||||||| || || |||||||| |||||||| ||||||||||||    
T  34034411 gggttcgaaccccgg-tcctgcatataataatgtattgtccctgccaactgagctatgctcacggggaca 34034343  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 2935877 - 2935813
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggg 168  Q
    ||||||||| ||||| || |||||||| ||||||| ||||||||||| |||||||| ||||||||    
T  2935877 ggttcgaactccggcccccgcatataacaatgcattgttcctgccaactgagctatgctcacggg 2935813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 20122509 - 20122573
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| ||| |||||||||||||||  |||| |||| |||||||| ||||||||    
T  20122509 gggttcgaaccccggcccctacatataataatgcattgtcctaccaactgagctatgctcacggg 20122573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 30474229 - 30474293
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||||  |||| |||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  30474229 gggttcgaacctcggcccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 30474293  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 32527111 - 32527167
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctat 159  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| ||||||||    
T  32527111 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctat 32527167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 29664647 - 29664596
Alignment:
Q  121 cctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||| ||||||| || ||||||||||||||||| |||||||||||    
T  29664647 cctgcatataacaatgcattgtccctgccaattgagctatgctcacggggac 29664596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 38807925 - 38807878
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||||| |||||||| |||||||| |||| ||||||||||||    
T  38807925 cctgcatataattatgcatgtccctgccaactgagttatactcacggg 38807878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 39334917 - 39334984
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaa 173  Q
    |||||||| || || |||| |||||||||||||||| |||||||| |||| ||| |||||||| ||||    
T  39334917 gttcgaaccccagcccctgtatataataatgcatgtccctgccaactgagttatgctcacgggaacaa 39334984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 8080704 - 8080766
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacg 166  Q
    |||||||||| || || |||  |||||||||||||||| ||| ||||||||||||| ||||||    
T  8080704 gggttcgaactccagcccctatatataataatgcatgtccctaccaattgagctatgctcacg 8080766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 22297486 - 22297548
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacg 166  Q
    |||||||||| || || |||||||||||||||||||  |||| |||| |||||||| ||||||    
T  22297486 gggttcgaacccctgcccctgcatataataatgcattgtcctaccaactgagctatgctcacg 22297548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 34107318 - 34107268
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||||| || ||||| |||||||| |||||||| |||||||||||    
T  34107318 cctgcatataattatacatgtccctgccaactgagctatgctcacggggac 34107268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 2558291 - 2558356
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||||| | | | ||| |||||||||||||||  |||| ||||||||||||| ||||||||    
T  2558291 agggttcgaaccctgacccctacatataataatgcattgtcctaccaattgagctattctcacggg 2558356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 11133137 - 11133068
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||| | ||||||||||| |||||| ||| ||| |||| |||||||| ||||||||||||    
T  11133137 gggttcgaaccccgacccctgcatataacaatgcattgtccctaccaactgagctatgctcacggggaca 11133068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 21970473 - 21970542
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| |||   |||||||||||||||||| ||| |||| ||| |||||||| ||||||||||||    
T  21970473 gggttcgaaccccgatccctgcatataataatgcattgtccctgtcaactgagctatgctcacggggaca 21970542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 22355127 - 22355074
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggacaaa 174  Q
    |||||| |||| ||||||||| | |||||| |||||||| ||||||||||||||    
T  22355127 cctgcacataacaatgcatgtccttgccaactgagctatgctcacggggacaaa 22355074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 43871011 - 43870946
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    ||||||| |||||||||||||||||||||||| ||| | ||||||  ||||||| |||| ||||||    
T  43871011 ttcgaaccccggctcctgcatataataatgcattgtccttgccaaccgagctatgctcatggggac 43870946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 6282277 - 6282229
Alignment:
Q  123 tgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||||||| ||| |||  ||| ||||||||||||||||||||    
T  6282277 tgcatataataatgcgtgtccctaacaactgagctatactcacggggac 6282229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 7086314 - 7086250
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||  ||||| |||||||||||||||||||   ||| |||| |||||||| ||||||||    
T  7086314 gggttcgaatcccggcccctgcatataataatgcattgccctaccaactgagctatgctcacggg 7086250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 8234826 - 8234890
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| ||| |||||||||||| ||  |||| |||| |||||||| ||||||||    
T  8234826 gggttcgaaccccggcccctacatataataatgtattgtcctaccaactgagctatgctcacggg 8234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 10262800 - 10262736
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||| | |||||||||||||||||||  |||| |||| |||| ||| ||||||||    
T  10262800 gggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagttatgctcacggg 10262736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 12206559 - 12206486
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaaacaaaa 179  Q
    |||||||||| ||| | |||| ||||||||||| ||||||||||||| | ||||||   |||||||||||| ||||    
T  12206559 gggttcgaaccccgacccctgaatataataatgtatgttcctgccaactaagctat--gcacggggacaaaaaaaa 12206486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 17154710 - 17154646
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| ||||  ||| ||| ||||||||    
T  17154710 gggttcgaaccccggcccctgcatataataatgcattgtcctaccaaccgagttatgctcacggg 17154646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 30737012 - 30736968
Alignment:
Q  128 ataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||| ||| | ||||||||||||||||| ||||||||||||    
T  30737012 ataataattcatatccctgccaattgagctatgctcacggggaca 30736968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 34376588 - 34376540
Alignment:
Q  119 ctcctgcatataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    ||||||||||||| ||||||||| |||||||| |||  |||||||||||    
T  34376588 ctcctgcatataacaatgcatgtccctgccaactgaattatactcacgg 34376540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 48175028 - 48174959
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaa 173  Q
    |||||||||||||||| |||| |||||||||||||||| | |||||| ||||||||||||||||||||||    
T  48175028 gggttcgaacaccggcccctgtatataataatgcatgtccttgccaactgagctatactcacggggacaa 48174959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 30644230 - 30644166
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||||||||| |||||||||||||||||||  |||| |||| |||||||||||||||||    
T  30644230 gggttcgaacaccggcccctgcatataataatgcattgtcctaccaactgagctatactcacggg 30644166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 35195904 - 35195836
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||| || |||||||||    
T  35195904 gggttcgaaccccggcccctgcatataataatgcatgtccctgccaactgagctatgcttacggggaca 35195836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 7392358 - 7392408
Alignment:
Q  122 ctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  7392358 ctgcatataacaatgcatgttcctgccaattgagctatgctcacggggaca 7392408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 5787522 - 5787458
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||| ||| ||||| |||||||||||||||||||  |||| ||||||||||||||||||||||    
T  5787522 gggttcaaaccccggcccctgcatataataatgcattgtcctaccaattgagctatactcacggg 5787458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 7465527 - 7465463
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||||  ||||||| |||||||| ||||||||    
T  7465527 gggttcgaaccccggcccctgcatataataatgcatgtctctgccaactgagctatgctcacggg 7465463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 38363217 - 38363150
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaaa 174  Q
    |||||||| |||| | ||||||||| |||| ||||||||||||||||| |||| ||||||||||||||    
T  38363217 ttcgaacatcggcccttgcatataacaatgtatgttcctgccaattgaactatgctcacggggacaaa 38363150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 41417309 - 41417379
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaa 173  Q
    |||||||||| ||| | |||||||||||| ||||| |||||||||||| |||||||| |||||||||||||    
T  41417309 gggttcgaaccccgacccctgcatataatgatgcactgttcctgccaactgagctatgctcacggggacaa 41417379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 29658306 - 29658375
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttc-ctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||||| ||||||||||| |||||||  || |||||||||||||||| ||||||||||||    
T  29658306 gggttcgaaccccggcccctgcatataacaatgcattgtcgctgccaattgagctatgctcacggggaca 29658375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 2261521 - 2261581
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    ||||||| ||||| |||||||||||||||||||  |||| ||||||||||||| |||||||    
T  2261521 ttcgaaccccggcccctgcatataataatgcattgtcctaccaattgagctatgctcacgg 2261581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 15912836 - 15912768
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||  | ||||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  15912836 gggttcgaaccccaacccctgcatataacaatgcattgttcctgccaattgagctattctcacggggac 15912768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 20527463 - 20527531
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| ||||||||||| |||||| ||| |||||||| |||||||||||||| |||||    
T  20527463 gggttcgaactccggcccctgcatataacaatgcattgtccctgccaactgagctatactcacagggac 20527531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 21285387 - 21285455
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| ||||||||||| |||||| ||| |||||||| |||||||| |||||||||||    
T  21285387 gggttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 21285455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 22965992 - 22966056
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||||  |||| |||||||||||||||||||  |||| ||||||||||||| ||||||||    
T  22965992 gggttcgaacctcggcccctgcatataataatgcattgtcctaccaattgagctatgctcacggg 22966056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 45267961 - 45268029
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaa 173  Q
    ||||||||| ||| |||||||||||||||||  ||||  ||||||| |||||||| |||||||||||||    
T  45267961 ggttcgaactccgactcctgcatataataatatatgtctctgccaactgagctatgctcacggggacaa 45268029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 26801735 - 26801801
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgc-atgttcctgccaattgagctatactcacgggga 170  Q
    |||||||||| |||||||||||||||||| |||| || ||||| |||| |||||||||||||||||||    
T  26801735 gggttcgaaccccggctcctgcatataat-atgcaatattcctaccaactgagctatactcacgggga 26801801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 36316009 - 36316072
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||| ||||| |||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  36316009 ggttcgaaccccggcccctgcatataataatgcattatcctaccaactgagctatgctcacggg 36316072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 14818399 - 14818469
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaa 173  Q
    ||||| |||| ||| | |||||||||||||||||| ||| |||||||| |||||||| |||||||||||||    
T  14818399 gggtttgaaccccgacccctgcatataataatgcactgtccctgccaactgagctatgctcacggggacaa 14818469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 15265397 - 15265467
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaa 173  Q
    ||||| |||| ||| | |||||||||||||||||| ||| |||||||| |||||||| |||||||||||||    
T  15265397 gggtttgaaccccgacccctgcatataataatgcactgtccctgccaactgagctatgctcacggggacaa 15265467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 27726404 - 27726470
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||| |||||  |||| ||||||||||||||| |||||||| ||||||||  ||||||||||    
T  27726404 ggttcgaaccccggccactgcttataataatgcatgtccctgccaactgagctatgttcacggggac 27726470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 29779040 - 29778978
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||| ||| | |||||||||||||||||||  |||| ||||||||||||| ||||||||    
T  29779040 gttcgaactccgacccctgcatataataatgcattatcctaccaattgagctatgctcacggg 29778978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 34960957 - 34961027
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaaaca 176  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||| |||||||| | || || ||||||||    
T  34960957 ttcgaaccccggctcctgcatataataatgcattgttcatgccaactgagctatgcccatggagacaaaca 34961027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 37917436 - 37917386
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||||| |||||||||||| |||| |||||||| |||||||||||    
T  37917436 cctgcatataattatgcatgttcctaccaactgagctatgctcacggggac 37917386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 31475874 - 31475939
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgc-atgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| || || ||||||||||||||||| |||| |||||||| |||||||| ||||||||    
T  31475874 gggttcgaaccccagcccctgcatataataatgcaatgtccctgccaactgagctatgctcacggg 31475939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 41139145 - 41139080
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    ||||||| ||| | ||||||||||||||||||| || |||||||| |||||||| |||||||||||    
T  41139145 ttcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 41139080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 8147239 - 8147283
Alignment:
Q  123 tgcatataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||    
T  8147239 tgcatataacaatgcatgtccctgccaattgagctatgctcacgg 8147283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 11808099 - 11808035
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||| | ||||||||||| ||||||||| ||| ||||||||||||  ||||||||    
T  11808099 gggttcgaaccccgacccctgcatataacaatgcatgtccctaccaattgagctaagctcacggg 11808035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 16814758 - 16814690
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||| | ||| ||||||||||||||||||| |||||| ||||||||  |||| ||||||    
T  16814758 gggttcgaaccccgacccctacatataataatgcatgttcttgccaactgagctatgttcacagggaca 16814690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 32814885 - 32814825
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    ||||||| ||| | ||||||||||||||||||||| ||| |||| |||||||| |||||||    
T  32814885 ttcgaactccgacccctgcatataataatgcatgtccctaccaactgagctatgctcacgg 32814825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 43635649 - 43635581
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||| |  |||||||||| |||||||||| ||||||| |||| ||| ||||||||||||    
T  43635649 gggttcgaaccccgaccgctgcatataacaatgcatgtttctgccaactgagttatgctcacggggaca 43635581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 44437859 - 44437923
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| | || |||||||| ||||||||    
T  44437859 gggttcgaaccccggcccctgcatataataatgcattgtcctactaactgagctatgctcacggg 44437923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 10958083 - 10958036
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||| |||||| ||||||| ||||||||||||||||| ||||||||    
T  10958083 cctgcacataatagtgcatgtccctgccaattgagctatgctcacggg 10958036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 24304319 - 24304386
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||| ||| | |||||||||||||||||| |||||||| ||||| |||||| || |||||||||    
T  24304319 gttcgaaccccgacccctgcatataataatgcattgttcctgtcaattaagctatgcttacggggaca 24304386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 27047750 - 27047809
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactca 164  Q
    ||||||||| ||||| |||||||||||||||||||  |||| |||| |||||||| ||||    
T  27047750 ggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgctca 27047809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 8725172 - 8725233
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacg 166  Q
    |||||||||| |||| ||||||||||||||||||||  |||| |||| |||||||| ||||||    
T  8725172 gggttcgaaccccgg-tcctgcatataataatgcatcgtcctaccaactgagctattctcacg 8725233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 47552274 - 47552212
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacg 166  Q
    |||||||||| ||||| | |||||||||||||||||  |||| |||| |||||||| ||||||    
T  47552274 gggttcgaaccccggcccttgcatataataatgcattgtcctaccaactgagctatgctcacg 47552212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 1649214 - 1649145
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    ||||||||||| | ||| |||||||| || ||||||| | ||| |||| |||||||| ||||||||||||    
T  1649214 agggttcgaaccctggcccctgcataaaacaatgcatatccctaccaactgagctatgctcacggggaca 1649145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 8195973 - 8195912
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||| ||||| |||| ||||||||||||||  |||| |||| |||||||| ||||||||    
T  8195973 ttcgaaccccggcccctggatataataatgcattgtcctaccaactgagctatgctcacggg 8195912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 19924810 - 19924773
Alignment:
Q  122 ctgcatataataatgcatgttcctgccaattgagctat 159  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  19924810 ctgcatataataatgcatgtccctgccaactgagctat 19924773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 32834343 - 32834400
Alignment:
Q  110 gaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    |||| ||||| ||||||||||| |||||||||||||  |||||||| ||| |||||||    
T  32834343 gaacgccggcccctgcatataacaatgcatgttcctatcaattgagttatgctcacgg 32834400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 41012615 - 41012676
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcac 165  Q
    |||||||| | ||||| ||| ||||||| ||||||||| ||| ||||||||||||| |||||    
T  41012615 gggttcgagctccggcccctacatataacaatgcatgtccctaccaattgagctatgctcac 41012676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 48088670 - 48088629
Alignment:
Q  125 catataataatgcatgttcctgccaattgagctatactcacg 166  Q
    |||||||||||| ||||||||||||| |||||||| ||||||    
T  48088670 catataataatgtatgttcctgccaactgagctatgctcacg 48088629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 23685588 - 23685648
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactca 164  Q
    |||||||||| ||||| |||||||||||||||||||  ||||  ||| |||||||| ||||    
T  23685588 gggttcgaaccccggcccctgcatataataatgcattgtcctatcaactgagctatgctca 23685648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 24397007 - 24396955
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgag 155  Q
    ||||||||||| ||| | |||||||||||||||||||  ||||||||| ||||    
T  24397007 agggttcgaactccgacccctgcatataataatgcattgtcctgccaactgag 24396955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 25818347 - 25818283
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| || || |||||||||||||||||||  |||| |||| |||| ||| ||||||||    
T  25818347 gggttcgaactccagcccctgcatataataatgcattatcctaccaactgagttatgctcacggg 25818283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 30741625 - 30741561
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||||||||| ||||||||||| ||| |||  |||| |||| |||| ||| ||||||||    
T  30741625 gggttcgaacaccggcccctgcatataacaatacattatcctaccaactgagttatgctcacggg 30741561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 33996886 - 33996953
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgc-atgttcctgccaattgagctatactcacgggga 170  Q
    ||||||||||| ||| |||||||||||||| |||| || | ||| |||| |||||||||||||||||||    
T  33996886 agggttcgaaccccgactcctgcatataat-atgcaatatccctaccaactgagctatactcacgggga 33996953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 43209451 - 43209411
Alignment:
Q  115 ccggctcctgcatataataatgcatgttcctgccaattgag 155  Q
    ||||| ||||||||||| |||||||||||||||||| ||||    
T  43209451 ccggcccctgcatataacaatgcatgttcctgccaactgag 43209411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 41793007 - 41793073
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  41793007 gggttcgaaccccggctcctgcatataacaatgcatg-tcctgccaattgagctatgctcacggggac 41793073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 2800080 - 2800012
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| |||||||| |||||||||||    
T  2800080 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 2800012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 4798575 - 4798639
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| |||||||||||||||||    
T  4798575 gggttcgaaccccggcccctgcatataataatgcattatcctaccaactgagctatactcacggg 4798639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 21133553 - 21133621
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||||| |||| ||| |||||||||||    
T  21133553 gggttcgaaccccgactcctgcatataataatgcattgttcctgccaactgagttatgctcacggggac 21133621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 2696594 - 2696525
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| |||| ||| ||||||||||||    
T  2696594 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagttatgctcacggggaca 2696525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 9525018 - 9524954
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  9525018 gggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 9524954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 11900610 - 11900566
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcac 165  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||    
T  11900610 cctgcatataataatgcatgttcctgccaactgagctatattcac 11900566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 15042399 - 15042463
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  15042399 gggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 15042463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 24608517 - 24608581
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  24608517 gggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 24608581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 29937270 - 29937203
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    ||||||||| ||||| ||||||||||| ||| ||||| ||| |||| |||||||| ||||||||||||    
T  29937270 ggttcgaactccggcccctgcatataacaatacatgtccctaccaactgagctatgctcacggggaca 29937203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 14011073 - 14011139
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||| ||||| ||||||||||| ||||||||| |||||||| ||| |||| ||||| |||||    
T  14011073 ggttcgaactccggcccctgcatataacaatgcatgtccctgccaactgaactatgctcacagggac 14011139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 20784688 - 20784745
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactca 164  Q
    ||||||||||||  ||||||||||||||||||||||||||||||| ||| |||| ||||    
T  20784688 gttcgaacaccga-tcctgcatataataatgcatgttcctgccaactgaactatgctca 20784745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 32940350 - 32940416
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||| ||| | |||| |||||| ||||||||| |||| ||| |||||||||||||||||||||    
T  32940350 gttcgaactccgacccctgtatataacaatgcatgtccctgtcaactgagctatactcacggggaca 32940416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 43847763 - 43847701
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacg 166  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| |||||||| ||||||    
T  43847763 gggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgctcacg 43847701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 39484407 - 39484468
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||| ||||| |||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  39484407 ttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 39484468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 1588827 - 1588759
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggaca 172  Q
    ||||||||| ||||| |||||||||||||||||| ||| |||||||| | |||||| ||||| ||||||    
T  1588827 ggttcgaaccccggcccctgcatataataatgcattgtccctgccaactaagctatgctcacagggaca 1588759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 6372636 - 6372700
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    ||||||||||| ||  | |||||||||||| |||||||| |||||||| |||||||| |||||||    
T  6372636 agggttcgaaccccaccccctgcatataattatgcatgtccctgccaactgagctatcctcacgg 6372700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 17980343 - 17980279
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| ||||||||||||||||| |  |||| |||| |||||||| ||||||||    
T  17980343 gggttcgaaccccggcccctgcatataataatgctttgtcctaccaactgagctatgctcacggg 17980279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 17987483 - 17987547
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| ||||||||  |||||||    
T  17987483 gggttcgaactccggcccctgcatataataatgcattatcctaccaactgagctatgttcacggg 17987547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 39432379 - 39432431
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggacaa 173  Q
    ||||||||||| | ||||||| |||||||| |||||||| |||||||||||||    
T  39432379 cctgcatataacattgcatgtccctgccaactgagctatgctcacggggacaa 39432431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 7345472 - 7345425
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||||||||||||||| |||||||| |||| ||| ||||||||    
T  7345472 cctgcatataataatgcatgtccctgccaactgagttatgctcacggg 7345425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 8034591 - 8034556
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat 139  Q
    |||||||||| |||||||||||||||||||||||||    
T  8034591 gggttcgaaccccggctcctgcatataataatgcat 8034556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 10292396 - 10292345
Alignment:
Q  121 cctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||||||||||| || |||||||| |||||||| |||||||||||    
T  10292396 cctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 10292345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 14012670 - 14012603
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaa 173  Q
    ||||||| ||||| ||||||||||| |||||| ||| |||||||| ||| |||| |||||||||||||    
T  14012670 ttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgaactatgctcacggggacaa 14012603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 25470881 - 25470948
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    ||||||||| ||| | | || ||||||||||||||||||||| ||| |||| ||| ||||||||||||    
T  25470881 ggttcgaaccccgacccatgaatataataatgcatgttcctgtcaactgagttatgctcacggggaca 25470948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 38790618 - 38790677
Alignment:
Q  115 ccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaa 173  Q
    ||||| |||||||||||||||||| ||| |||||||| |||| ||| |||||||||||||    
T  38790618 ccggcccctgcatataataatgcattgtccctgccaactgagttatgctcacggggacaa 38790677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 26657917 - 26657851
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacgggga 170  Q
    |||||||||| ||||  ||||||||||| ||||||||| ||| |||| |||||||| ||||| ||||    
T  26657917 gggttcgaaccccggtccctgcatataacaatgcatgtccctaccaactgagctatgctcacaggga 26657851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 159
Target Start/End: Complemental strand, 29653098 - 29653060
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctat 159  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  29653098 cctgcatataataatgcatgtccctgccaattgaactat 29653060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 34089614 - 34089577
Alignment:
Q  125 catataataatgcatgttcctgccaattgagctatact 162  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  34089614 catataacaatgcatgttcctgccaattgacctatact 34089577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 1032994 - 1033058
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||| | |||||||||||||||||||  |||  |||| ||||||| |||||||||    
T  1032994 gggttcgaactccgacccctgcatataataatgcattgtcccaccaactgagctagactcacggg 1033058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 7314794 - 7314730
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacgg 167  Q
    ||||||||||  |||| |||||||||||||||| | ||| ||||||||||||| ||| |||||||    
T  7314794 gggttcgaacctcggcccctgcatataataatgtattgtccctgccaattgagttatgctcacgg 7314730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 23857358 - 23857422
Alignment:
Q  105 ggttcgaacaccggctcc-tgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||| ||||| || |||||||||||||||||  |||| |||| |||||||| ||||||||    
T  23857358 ggttcgaaccccggccccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 23857422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 25119269 - 25119205
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||  | |||||||||||||||||||  |||| |||||||| |||| ||||||||    
T  25119269 gggttcgaaccccaacccctgcatataataatgcattgtcctaccaattgaactatgctcacggg 25119205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 139
Target Start/End: Complemental strand, 34632052 - 34632020
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcat 139  Q
    ||||||||||||| |||||||||||||||||||    
T  34632052 ttcgaacaccggcccctgcatataataatgcat 34632020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 44254348 - 44254416
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaaa 174  Q
    |||||||| ||| |||| |||||||||||||||||| |||| || || |||||  || |||||||||||    
T  44254348 gttcgaaccccgactcccgcatataataatgcatgtccctgtcatttaagctaagctaacggggacaaa 44254416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 41492533 - 41492600
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  41492533 ggttcgaaccccggcccctgcatataataatgcatgtccctgccaactgagctatgctcacggggaca 41492600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 27921957 - 27921893
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| ||||||||||||||||||||| ||| |||| |||||||| ||||||||    
T  27921957 gggttcgaaccccggcccctgcatataataatgcatgtccctaccaactgagctatgctcacggg 27921893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 28520765 - 28520833
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| |||||||| |||||||||||    
T  28520765 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 28520833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 54854213 - 54854281
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| || || |||||||||||| |||||||| |||||||| |||||||| ||||||||||||    
T  54854213 gggttcgaaccccagcccctgcatataattatgcatgtccctgccaactgagctatgctcacggggaca 54854281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 9693023 - 9692952
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaaa 174  Q
    |||||||||| ||||| |||||||||||||||||| | | |||||||| |||||||| ||||||||||||||    
T  9693023 gggttcgaaccccggcccctgcatataataatgcattatccctgccaactgagctatgctcacggggacaaa 9692952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 52560824 - 52560761
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||| ||||| |||||||||||||||||||  |||| ||||||||||||| ||||||||    
T  52560824 ggttcgaaccccggcccctgcatataataatgcattgtcctaccaattgagctatgctcacggg 52560761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 56546484 - 56546547
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||| ||||| |||||||||||||||||||  |||| ||||||||||||| ||||||||    
T  56546484 ggttcgaaccccggcccctgcatataataatgcattgtcctaccaattgagctatgctcacggg 56546547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 14149854 - 14149784
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaa 173  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| ||||||||  ||||||||||||    
T  14149854 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatggtcacggggacaa 14149784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 53815757 - 53815688
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| || || |||||||||||||||||| ||| |||||||| |||||||| ||||||||||||    
T  53815757 gggttcgaaccccagcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 53815688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 20610798 - 20610730
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaaa 174  Q
    |||||||| ||||| ||||||||||| ||||||||| |||||||| |||||||| ||||| | ||||||    
T  20610798 gttcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagctatgctcacagagacaaa 20610730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 20753159 - 20753223
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| ||| ||||||||||||||| ||||| |||| |||||||| ||||||||    
T  20753159 gggttcgaaccccggcccctacatataataatgcattttcctaccaactgagctatgctcacggg 20753223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 36008336 - 36008268
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| ||||||||||| |||||| ||| |||||||| |||||||| |||||||||||    
T  36008336 gggttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 36008268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 47017980 - 47018044
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  47017980 gggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 47018044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 48968244 - 48968312
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| ||| |||| |||||||||||    
T  48968244 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgaactatgctcacggggac 48968312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 49039479 - 49039547
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| || |  ||||||||||| ||||||||| |||||||| |||||||| ||||||||||||    
T  49039479 gggttcgaaccccagtccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 49039547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 20166377 - 20166310
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||  |||| ||||||||||| ||||||||| |||||||| |||||||  |||||||||||    
T  20166377 gggttcgaacctcggcccctgcatataacaatgcatgtccctgccaactgagctacgctcacggggac 20166310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 36257755 - 36257688
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| |||||||| |||| ||| ||| |||||||| |||||||| |||||||||||    
T  36257755 gggttcgaaccccggcccctgcatacaatactgcttgtccctgccaactgagctatgctcacggggac 36257688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 35031444 - 35031382
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacg 166  Q
    ||||||||||  ||||||||||||||||||||||||  |||| |||| |||||||| ||||||    
T  35031444 gggttcgaacctcggctcctgcatataataatgcattgtcctaccaactgagctatgctcacg 35031382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 30152171 - 30152118
Alignment:
Q  122 ctgcatataataatgcat-gttcctgccaattgagctatactcacggggacaaa 174  Q
    |||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||    
T  30152171 ctgcatataacaatgcattgttcctgccaactgagctatgctcacggggacaaa 30152118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 9285693 - 9285757
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| || |  |||||||||||||||||||  |||| ||||||||||||| ||||||||    
T  9285693 gggttcgaaccccagaccctgcatataataatgcattgtcctaccaattgagctatgctcacggg 9285757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 34106645 - 34106597
Alignment:
Q  122 ctgcatataataatgcat-gttcctgccaattgagctatactcacgggg 169  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||||    
T  34106645 ctgcatataataatgcattgttcctgccaactgagctatgctcacgggg 34106597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 38657584 - 38657532
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggacaa 173  Q
    ||||||||||| ||||||||| |||||||| ||||| || |||||||||||||    
T  38657584 cctgcatataacaatgcatgtccctgccaactgagccatgctcacggggacaa 38657532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 40150534 - 40150466
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||| | |||| |||||||||||||| ||||||||||| ||| |||| |||||||||||    
T  40150534 gggttcgaaccccgacccctgtatataataatgcattgttcctgccaactgaactatgctcacggggac 40150466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 42411488 - 42411556
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||| | |||||||||||| |||||| || |||||||| |||||||| |||||||||||    
T  42411488 gggttcgaaccccgacccctgcatataattatgcattgtccctgccaactgagctatgctcacggggac 42411556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 49743423 - 49743355
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||  ||||| ||||||||||||||||||| | |||||||| ||| |||| ||| ||||||||    
T  49743423 gggttcgaatcccggcccctgcatataataatgcatatccctgccaactgaactatgctcgcggggaca 49743355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 49757289 - 49757356
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgc-atgttcctgccaattgagctatactcacgggga 170  Q
    ||||||||||| |||||||||||||||||| |||| || ||||| |||| |||||||| ||||||||||    
T  49757289 agggttcgaaccccggctcctgcatataat-atgcaatattcctaccaactgagctatgctcacgggga 49757356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 33944398 - 33944461
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||| ||||| |||||||||||||||||||  |||| |||| |||| ||| ||||||||    
T  33944398 ggttcgaaccccggcccctgcatataataatgcattatcctaccaactgagttatgctcacggg 33944461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 36045874 - 36045823
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    ||||||||||| ||||||||| |||| |||||||||||| ||||| ||||||    
T  36045874 cctgcatataacaatgcatgtccctgtcaattgagctatgctcactgggaca 36045823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 36132293 - 36132227
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacgggga 170  Q
    |||||||||| ||| ||||||||||||||| |||| | ||||| |||||||||||| |||||||||||    
T  36132293 gggttcgaaccccgactcctgcatataata-tgcaatattcctaccaattgagctaaactcacgggga 36132227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 43049984 - 43050031
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||||| |||||||||||||| ||| |||||||| ||||||||    
T  43049984 cctgcatataacaatgcatgttcctgtcaactgagctatgctcacggg 43050031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 136
Target Start/End: Original strand, 46482852 - 46482883
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatg 136  Q
    ||||||||||||||||||||||||||||||||    
T  46482852 ggttcgaacaccggctcctgcatataataatg 46482883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 49319454 - 49319387
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||| |||| ||| | ||||||||||||||||||||| | |||||| |||||||| |||||| ||||    
T  49319454 gggttggaaccccgacccctgcatataataatgcatgtccatgccaactgagctatgctcacgaggac 49319387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 12796710 - 12796660
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||| |||| ||||||||||||| |||| ||| |||||||||||    
T  12796710 cctgcatataacaatgtatgttcctgccaactgagttatgctcacggggac 12796660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 32885748 - 32885686
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    ||||||||| ||| | |||||||||||||||||||  |||| |||| |||||||| |||||||    
T  32885748 ggttcgaactccgacccctgcatataataatgcattgtcctaccaactgagctatgctcacgg 32885686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 35379293 - 35379251
Alignment:
Q  126 atataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||| |||||||||||||| ||| |||||||||||||||||    
T  35379293 atataacaatgcatgttcctgtcaactgagctatactcacggg 35379251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 36954198 - 36954132
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaa-ttgagctatactcacggg 168  Q
    |||||||||| ||| | |||||||||||||||||| ||| |||||||| ||||||||| ||||||||    
T  36954198 gggttcgaaccccgacccctgcatataataatgcattgtccctgccaacttgagctatgctcacggg 36954132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 42758197 - 42758258
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcac 165  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||| | || |||||||| |||||    
T  42758197 agggttcgaac-ccggcccctgcatataataatgcatgtccctacaaactgagctatgctcac 42758258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 548924 - 548985
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||| ||||| |||||||||||||||||||  |||| |||| || ||||| ||||||||    
T  548924 ttcgaaccccggcccctgcatataataatgcattgtcctaccaactgggctatgctcacggg 548985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 6054039 - 6053986
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctat 159  Q
    |||||||| ||||| |||||||||||||||||||  |||| |||| ||||||||    
T  6054039 gttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctat 6053986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 8241425 - 8241474
Alignment:
Q  122 ctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||||||||||||||||| ||| |||| ||| || ||||||||    
T  8241425 ctgcatataataatgcatgttcctgacaactgagttatgctaacggggac 8241474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 15853884 - 15853815
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    ||||||||||| || || |||| |||||| |||||||||||||||||| |||  ||| ||||||| ||||    
T  15853884 agggttcgaaccccagcccctgtatataacaatgcatgttcctgccaactgaattatgctcacggagaca 15853815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 33076591 - 33076529
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||| | ||||||||||||||||||||| ||  |||| |||||||| ||||||||    
T  33076591 gggttcgaaccccgacccctgcatataataatgcatgtccc--ccaactgagctatgctcacggg 33076529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 48512243 - 48512190
Alignment:
Q  121 cctgcatataataatgcat-gttcctgccaattgagctatactcacggggacaa 173  Q
    ||||||||||| ||||||| || |||||||| |||||||| |||||||||||||    
T  48512243 cctgcatataacaatgcattgtccctgccaactgagctatgctcacggggacaa 48512190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 52031268 - 52031203
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||| | |||||||||| |||||||| ||||||||||| |||||||  ||||||||    
T  52031268 gggttcgaaccccgacccctgcatatactaatgcattgttcctgccaactgagctaagctcacggg 52031203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 3465644 - 3465580
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| |||| ||| || |||||    
T  3465644 gggttcgaactccggcccctgcatataataatgcattgtcctaccaactgagttatgcttacggg 3465580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 8690275 - 8690207
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||| | |||||||||||||||||| ||| | |||||| |||||||| |||||| ||||    
T  8690275 gggttcgaaccccgacccctgcatataataatgcattgtccttgccaactgagctatgctcacgaggac 8690207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 13211386 - 13211450
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||| | | |||||||||||||||||  |||| |||| ||| |||||||||||||    
T  13211386 gggttcgaaccccgacccatgcatataataatgcattgtcctaccaactgaactatactcacggg 13211450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 24234108 - 24234172
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||| ||| ||||| |||||||||||||||||||   ||| |||| |||||||| ||||||||    
T  24234108 gggttcaaaccccggcccctgcatataataatgcattgacctaccaactgagctatgctcacggg 24234172  T

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Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 17350122 - 17350053
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  17350122 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatactcacggggaca 17350053  T

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Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 25819246 - 25819177
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||||||||| |||||||||||||| ||| |||||||| |||||||| ||||||||||||    
T  25819246 gggttcgaaccccggctcctacatataataatgcattgtccctgccaactgagctatgctcacggggaca 25819177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 9768843 - 9768911
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||| | ||||||||||| ||||||||| |||||||| |||||||| ||||||||||||    
T  9768843 gggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 9768911  T

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Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 18003873 - 18003809
Alignment:
Q  108 tcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||| ||||| ||||||||||| ||||||||| |||||||| |||||||| ||||||||||||    
T  18003873 tcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 18003809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 39238777 - 39238701
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggacaaacaaaa 179  Q
    ||||||||||  |||| ||||||||||||||||||| || |||||||| |||||||| |||||||||||||| ||||    
T  39238777 gggttcgaacctcggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaaaaaaaa 39238701  T

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Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 47763420 - 47763495
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaaacaaaa 179  Q
    ||||||||| ||||| |||||||||||||||||| ||| |||||||| |||||||| |||||||| ||||| ||||    
T  47763420 ggttcgaactccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacgggaacaaaaaaaa 47763495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 52961116 - 52961183
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| ||||||||||| ||||||||| | |||||| |||||||| |||||||||||    
T  52961116 gggttcgaaccccggcccctgcatataacaatgcatgtccttgccaactgagctatgctcacggggac 52961183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 38021313 - 38021243
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaa 173  Q
    |||||||||| ||||| |||||||||||||||||| ||| | |||||| |||||||| |||||||||||||    
T  38021313 gggttcgaactccggcccctgcatataataatgcattgtccttgccaactgagctatgctcacggggacaa 38021243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 40678880 - 40678814
Alignment:
Q  108 tcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaa 173  Q
    |||||| ||||| |||||||||||||||||| ||| |||||||| |||||||| |||||||||||||    
T  40678880 tcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaa 40678814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 18179389 - 18179320
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaa 173  Q
    |||||||||| ||||  ||||||||||| ||||||||| |||||||| |||| ||| |||||||||||||    
T  18179389 gggttcgaactccggtccctgcatataacaatgcatgtccctgccaactgagttatgctcacggggacaa 18179320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 29491531 - 29491462
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||| | |||||||||||||||||| ||| |||||||| |||||||| ||||||||||||    
T  29491531 gggttcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 29491462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 1721201 - 1721133
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||  ||||| ||||||||||| ||||||||||||| |||| |||||||| ||||| ||||||    
T  1721201 gggttcgaaacccggcccctgcatataacaatgcatgttcctaccaactgagctatgctcacagggaca 1721133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 2052716 - 2052784
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| ||||||||| ||||||||| || |||||||| |||||||| |||||||||||    
T  2052716 gggttcgaaccccggcccctgcatatgataatgcattgtccctgccaactgagctatgctcacggggac 2052784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 21884636 - 21884572
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||||  |||| |||||||||||||||||||  |||| ||||||||||||| ||||||||    
T  21884636 gggttcgaacctcggcccctgcatataataatgcattgtcctaccaattgagctatgctcacggg 21884572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 3341770 - 3341825
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctat 159  Q
    |||||||| | ||||| ||||||||||||||||||||| |||||||| ||||||||    
T  3341770 gggttcgatccccggcccctgcatataataatgcatgtccctgccaactgagctat 3341825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 9931148 - 9931081
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| || |||| ||||||||||||||||||| ||||| || |||| ||| |||||||||||    
T  9931148 gggttcgaactccagctcttgcatataataatgcatgtccctgctaactgagttatgctcacggggac 9931081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 38019985 - 38020046
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||| ||||| |||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  38019985 ttcgaactccggcccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 38020046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 42908830 - 42908765
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||| ||| | ||||||||||| ||||||||| |||||||| |||||||  |||||||||||    
T  42908830 gttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgagctaagctcacggggac 42908765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 4511566 - 4511626
Alignment:
Q  111 aacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||| | ||||||||||||||||||||| | ||||||||||| |||  ||||||||||    
T  4511566 aacaccgacccctgcatataataatgcatgtccttgccaattgagttatgttcacggggac 4511626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 7906360 - 7906428
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| || || ||||||||||| ||||||||| ||| |||| ||| |||| ||||||||||||    
T  7906360 gggttcgaaccccagcccctgcatataacaatgcatgtccctaccaactgaactatgctcacggggaca 7906428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 24014644 - 24014704
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacg 166  Q
    |||||||| ||||| |||||||||||||||||||  || | |||| |||||||||||||||    
T  24014644 gttcgaactccggcccctgcatataataatgcattgtcttaccaactgagctatactcacg 24014704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 27745218 - 27745154
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| |||   ||||||||||||||||||| ||||| |||| |||||||| ||||||||    
T  27745218 gggttcgaaccccgatccctgcatataataatgcattttcctaccaaatgagctatgctcacggg 27745154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 4354141 - 4354200
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcac 165  Q
    |||||||| ||||| |||||||||||||||||||  |||| |||| |||||||| |||||    
T  4354141 gttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgctcac 4354200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 24168613 - 24168676
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    |||||||||| ||||  ||| ||||||||||||||||||||| | || |||||||| |||||||    
T  24168613 gggttcgaaccccggtccctacatataataatgcatgttcctacaaactgagctatgctcacgg 24168676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 24662026 - 24661979
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||||||||||||  |||| ||||||||||||| ||||||||    
T  24662026 cctgcatataataatgcattgtcctaccaattgagctatgctcacggg 24661979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 15368866 - 15368812
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagcta 158  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| |||||||    
T  15368866 gggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagcta 15368812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 19976586 - 19976656
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggacaa 173  Q
    |||||||||| ||||| |||||||||||  || ||| || |||||||| |||||||| |||||||||||||    
T  19976586 gggttcgaaccccggcccctgcatataaccatacattgtccctgccaactgagctatgctcacggggacaa 19976656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 1661004 - 1660967
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgt 141  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  1661004 gggttcgaaccccggcccctgcatataataatgcatgt 1660967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 9527488 - 9527419
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    ||||||| ||| ||| | ||||||||||| ||||||| || |||||||| |||||||| |||||||||||    
T  9527488 agggttcaaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 9527419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 9951547 - 9951486
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactca 164  Q
    ||||||||||| ||| | |||| |||||||||| |||||| |||||||| ||||||| ||||    
T  9951547 agggttcgaaccccgacccctgtatataataatacatgtttctgccaatcgagctatgctca 9951486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 23930577 - 23930642
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||||| ||| | |||||||||||||||||||  |||| |||| ||| |||| ||||||||    
T  23930577 agggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgaactatgctcacggg 23930642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 35111710 - 35111642
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||| | |||||||||||||||||| |||||||  ||| |||||||| ||||||||||||    
T  35111710 gggttcgaaccccgcc-cctgcatataataatgcattgttcctatcaactgagctatgctcacggggaca 35111642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 43020655 - 43020602
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggacaaa 174  Q
    ||||||||||||||||||||| ||||||||  ||||||| ||||| | ||||||    
T  43020655 cctgcatataataatgcatgtccctgccaaccgagctatgctcaccgagacaaa 43020602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 43837434 - 43837499
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||||| ||| | |||||||| || ||||||| ||||| |||| |||||||| ||||||||    
T  43837434 agggttcgaaccccgacccctgcatagaagaatgcattttcctaccaactgagctatgctcacggg 43837499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 51917554 - 51917603
Alignment:
Q  122 ctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||||||||||||   |||||| |||||||| |||||||||||    
T  51917554 ctgcatataataatgcatgtctatgccaactgagctatgctcacggggac 51917603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 52833140 - 52833205
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| |||| ||  ||||||||    
T  52833140 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagttaggctcacggg 52833205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 538363 - 538427
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  | || |||| ||| |||| ||||||||    
T  538363 gggttcgaactccggcccctgcatataataatgcattgttctaccaactgaactatgctcacggg 538427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 2643868 - 2643916
Alignment:
Q  123 tgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||||||||||||  ||||||| | |||||| |||||||||||    
T  2643868 tgcatataataatgcatgtctctgccaactaagctatgctcacggggac 2643916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 4429515 - 4429579
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    ||||||||||| ||  | |||||||||||||||||||  |||| |||| |||||||| |||||||    
T  4429515 agggttcgaaccccaacccctgcatataataatgcattgtcctaccaactgagctatgctcacgg 4429579  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 6616783 - 6616747
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgt 141  Q
    |||||||||||||||||||||||||||  ||||||||    
T  6616783 ggttcgaacaccggctcctgcatataacgatgcatgt 6616747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 11238065 - 11238129
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||| ||| | ||||||||||||||||||||| | |||||  |||||||| |||||| ||||    
T  11238065 ttcgaaccccgacccctgcatataataatgcatgtccatgccatctgagctatgctcacgaggac 11238129  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 12553243 - 12553191
Alignment:
Q  115 ccggctcctgcatataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    ||||| ||||||||||| ||||||||||||| |||| |||||| | |||||||    
T  12553243 ccggcccctgcatataacaatgcatgttcctaccaactgagctgtgctcacgg 12553191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 20357521 - 20357457
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| || || |||||||||||||||||||  |||| |||| |||| ||| ||||||||    
T  20357521 gggttcgaaccccagcccctgcatataataatgcattgtcctaccaactgagttatgctcacggg 20357457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 20562434 - 20562498
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| || || |||||||||||||||||||  |||| |||| |||| ||| ||||||||    
T  20562434 gggttcgaaccccagcccctgcatataataatgcattgtcctaccaactgagttatgctcacggg 20562498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 23464020 - 23464080
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactca 164  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| ||| |||| ||||    
T  23464020 gggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgaactatgctca 23464080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 29442017 - 29442069
Alignment:
Q  120 tcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||| |||||||||||||||  |||| |||| |||||||| ||||||||||||    
T  29442017 tcctacatataataatgcattgtcctaccaactgagctatgctcacggggaca 29442069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 43884859 - 43884792
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgc-atgttcctgccaattgagctatactcacgggga 170  Q
    ||||||||||| |||||||||||||||||| |||| || | ||| |||| ||||||| |||||||||||    
T  43884859 agggttcgaaccccggctcctgcatataat-atgcaatatccctaccaactgagctaaactcacgggga 43884792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 40250212 - 40250280
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaa 173  Q
    ||||||||| ||| ||||||||||||| |||||||||| ||||||| |||||||| |||||||||||||    
T  40250212 ggttcgaaccccgactcctgcatataacaatgcatgttactgccaactgagctatgctcacggggacaa 40250280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 3535970 - 3536037
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| |||||||||| |||||| ||||||||| |||||||| ||| |||| |||||||||||    
T  3535970 gggttcgaaccccggctcctgtatataacaatgcatgtccctgccaactgaactatgctcacggggac 3536037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 1463932 - 1463864
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| |||||||| ||||| |||||    
T  1463932 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacagggac 1463864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 32158448 - 32158512
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| ||||||||||||  ||||||||    
T  32158448 gggttcgaaccccggcccctgcatataataatgcattgtcctaccaattgagctaagctcacggg 32158512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 25660973 - 25660906
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||  ||||| ||||||||||| ||||||| | |||||||| |||||||| |||||||||||    
T  25660973 gggttcgaatcccggcccctgcatataacaatgcatatccctgccaactgagctatgctcacggggac 25660906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 7147054 - 7147120
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||| ||| | ||||||||||||||||||||| | | |||| |||||||| |||||||||||    
T  7147054 ggttcgaaccccgacccctgcatataataatgcatgtccttaccaactgagctatgctcacggggac 7147120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 28537196 - 28537126
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaaa 174  Q
    |||||||||| ||||| | ||||||||| ||||||||| | || |||||||| ||| ||||||||||||||    
T  28537196 gggttcgaaccccggcccatgcatataacaatgcatgtccatgtcaattgagttatgctcacggggacaaa 28537126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 29106071 - 29106133
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcac 165  Q
    |||||||||||  |||| |||||||||||||||||||  |||| ||||||||||||| |||||    
T  29106071 agggttcgaacttcggcccctgcatataataatgcattgtcctaccaattgagctatgctcac 29106133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 37303996 - 37303926
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggaca 172  Q
    ||||||||||| ||| | ||||||||||||||| ||| || |||||||| |||||||| ||||||||||||    
T  37303996 agggttcgaaccccgacccctgcatataataatacattgtccctgccaactgagctatgctcacggggaca 37303926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 40339134 - 40339207
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaaacaaaa 179  Q
    ||||||||| ||||| |||||||||||||||||||  |||| | || |||||||| ||||| |||||||||||||    
T  40339134 ggttcgaaccccggcccctgcatataataatgcattgtcctactaactgagctatgctcac-gggacaaacaaaa 40339207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 19059037 - 19059102
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||||||| ||||| ||||||||| |||||||||  |||| |||| |||||||| ||||||||    
T  19059037 agggttcgaaccccggcccctgcatatgataatgcattgtcctaccaactgagctatgctcacggg 19059102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 20945928 - 20945989
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||||| ||||| |||||||||||||||||||  |||| ||||||||| ||| ||||||||    
T  20945928 ttcgaaccccggcccctgcatataataatgcattgtcctaccaattgagttatgctcacggg 20945989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 6447515 - 6447579
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggg 168  Q
    ||||||||| ||||| |||||||||||||||||| ||| |||||||| |||| ||| ||||||||    
T  6447515 ggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagttatgctcacggg 6447579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 9577363 - 9577299
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| | |||||||||||||||||  |||| |||| |||| ||||||||||||    
T  9577363 gggttcgaaccccggcccatgcatataataatgcattgtcctaccaactgagttatactcacggg 9577299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 11246545 - 11246597
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggacaa 173  Q
    ||||||||||| ||||||||| |||||||| |||||||| ||||||| |||||    
T  11246545 cctgcatataacaatgcatgtccctgccaactgagctatgctcacggtgacaa 11246597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 18872582 - 18872518
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||| | |||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  18872582 gggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 18872518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 33800954 - 33800890
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| |||| ||| ||||||||    
T  33800954 gggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagttatgctcacggg 33800890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 42455428 - 42455484
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctata 160  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| |||||||||    
T  42455428 gggttcgaactccggcccctgcatataataatgcattgtcctaccaactgagctata 42455484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 9963460 - 9963409
Alignment:
Q  121 cctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||| ||||||| || |||||||| ||||||||||||||||||||    
T  9963460 cctgcatataacaatgcattgtccctgccaactgagctatactcacggggac 9963409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 18478065 - 18478002
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacg 166  Q
    ||||||||||| ||||| || ||||||||||||||||  |||| |||| |||||||| ||||||    
T  18478065 agggttcgaaccccggccccagcatataataatgcattgtcctaccaactgagctatgctcacg 18478002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 31556879 - 31556812
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||| | ||||||||||| ||||||||| ||||| || |||||||| || ||||||||    
T  31556879 gggttcgaactccgacccctgcatataacaatgcatgtccctgctaagtgagctatgctaacggggac 31556812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 37417162 - 37417241
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaaacaaaata 181  Q
    ||||||||||| | ||| |||||||||||||||| | ||| |||||||| |||||||  |||||||| ||||| ||||||    
T  37417162 agggttcgaaccctggcccctgcatataataatgtattgtccctgccaactgagctaagctcacgggaacaaataaaata 37417241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 20186910 - 20186864
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    ||||||||||||||||||||| |||||||| ||||| || |||||||    
T  20186910 cctgcatataataatgcatgtccctgccaactgagcaatgctcacgg 20186864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 38040310 - 38040260
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||| ||||||||| |||||||| |||||||| |||| ||||||    
T  38040310 cctgcatataacaatgcatgtccctgccaactgagctatgctcatggggac 38040260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 19608672 - 19608607
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||| ||| | ||||||||||||||||||| |||||  ||| |||||||| |||| ||||||    
T  19608672 gttcgaaccccgacccctgcatataataatgcatattcctatcaactgagctatgctcatggggac 19608607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 20735212 - 20735277
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    ||||||| ||||| ||| |||||||||||||| ||| |||||||| ||||||||  ||||||||||    
T  20735212 ttcgaaccccggcccctacatataataatgcattgtccctgccaactgagctatgttcacggggac 20735277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 29096342 - 29096403
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcac 165  Q
    |||||||||| ||||| | |||||||||||||||||  |||| |||| |||||||| |||||    
T  29096342 gggttcgaactccggcccttgcatataataatgcattgtcctaccaactgagctatgctcac 29096403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 35813293 - 35813342
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacgggga 170  Q
    ||||||||||| ||||||||| |||| ||| |||||||| ||||||||||    
T  35813293 cctgcatataacaatgcatgtccctgtcaactgagctatgctcacgggga 35813342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 36045168 - 36045233
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||| | |||||||||||||||||| ||||| || ||| |||||||| ||||||||    
T  36045168 gggttcgaaccccgacccctgcatataataatgcattgttcttgtcaactgagctatgctcacggg 36045233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 4674849 - 4674917
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||| | |||||||||||||||||| ||| |||| ||| |||||||| |||||| ||||    
T  4674849 gggttcgaaccccgacccctgcatataataatgcattgtccctgtcaactgagctatgctcacgaggac 4674917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 42595802 - 42595738
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||| ||| ||||  |||||||||||||||| ||  |||| ||||||||||||| ||||||||    
T  42595802 gggttcaaaccccggtccctgcatataataatgtattgtcctaccaattgagctatgctcacggg 42595738  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 42781628 - 42781684
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctata 160  Q
    |||||||||| |||   ||||||||||| ||||||||| |||||||| |||||||||    
T  42781628 gggttcgaaccccgaaccctgcatataacaatgcatgtccctgccaactgagctata 42781684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 43185247 - 43185211
Alignment:
Q  115 ccggctcctgcatataataatgcatgttcctgccaat 151  Q
    ||||| || ||||||||||||||||||||||||||||    
T  43185247 ccggcccccgcatataataatgcatgttcctgccaat 43185211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 34070 - 34137
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaaa 174  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||    
T  34070 ttcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggacaaa 34137  T

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Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 10455803 - 10455736
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| ||||||||||| |||||||||||||||||| ||| |||| |||||||||||    
T  10455803 gggttcgaaccccggcccctgcatataacaatgcatgttcctgccaactgaactatgctcacggggac 10455736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 9064927 - 9064858
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| |||||||| ||||||||||||    
T  9064927 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 9064858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 14981735 - 14981804
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||| ||||| |||||||||||||||||| ||| |||||||| |||||||| |||||||||||    
T  14981735 agggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 14981804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 34524932 - 34524868
Alignment:
Q  108 tcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||| ||||| ||||||||||| ||||||||| |||||||| |||||||| ||||||||||||    
T  34524932 tcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 34524868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 3448413 - 3448342
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggacaaa 174  Q
    |||||||||| ||||| ||||| ||||| ||||||| || ||||||||||||||||| ||||||||||||||    
T  3448413 gggttcgaaccccggcccctgcgtataacaatgcattgtccctgccaattgagctatgctcacggggacaaa 3448342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 10377158 - 10377222
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| |||||  ||||||||||||||||||  |||| |||| |||||||||||||||||    
T  10377158 gggttcgaaccccggcctctgcatataataatgcattgtcctaccaactgagctatactcacggg 10377222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 12089158 - 12089094
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  12089158 gggttcgaactccggcccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 12089094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 11520776 - 11520711
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||| |||||  |||||||||| ||||||| | ||||||||||||| ||| |||||||||||    
T  11520776 gttcgaaccccggccactgcatataagaatgcatatccctgccaattgagatatgctcacggggac 11520711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 22730753 - 22730809
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggacaaacaa 177  Q
    ||||||||||| |||||||||  ||||||| |||| ||| |||||||||||||||||    
T  22730753 cctgcatataacaatgcatgtctctgccaactgagttatgctcacggggacaaacaa 22730809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 4844187 - 4844136
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    ||||||||||| ||||||||| |||||||| |||| |||||||| |||||||    
T  4844187 cctgcatataacaatgcatgtccctgccaactgagttatactcatggggaca 4844136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 12341483 - 12341416
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacgggga 170  Q
    ||||||||| | ||||| ||| |||||||||||| ||||||||| ||| ||| |||| ||||||||||    
T  12341483 agggttcgacctccggcccctacatataataatgtatgttcctgtcaactgaactatgctcacgggga 12341416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 19135971 - 19135924
Alignment:
Q  123 tgcatataataatgcatgttcctgccaattgagctatactcacgggga 170  Q
    ||||||||||||||||||| ||||||||  ||||||| ||||||||||    
T  19135971 tgcatataataatgcatgtccctgccaaccgagctatgctcacgggga 19135924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 26669693 - 26669760
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| || || ||| |||||||| |||||||| ||| |||| |||||||| |||||||||||    
T  26669693 gggttcgaaccccagcccctacatataattatgcatgtccctaccaactgagctatgctcacggggac 26669760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 30833078 - 30833011
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||| | ||||||||||| ||||||||| |||||||| ||| |||| |||| ||||||    
T  30833078 gggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgaactatgctcatggggac 30833011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 2945640 - 2945586
Alignment:
Q  121 cctgcatataataatgcat-gttcctgccaattgagctatactcacggggacaaa 174  Q
    ||||||||||| ||||||| || |||||||| |||||||| ||||||||||||||    
T  2945640 cctgcatataacaatgcattgtccctgccaactgagctatgctcacggggacaaa 2945586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 6219393 - 6219347
Alignment:
Q  126 atataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||||||||| |||||||| ||||||||  |||||||||||    
T  6219393 atataataatgcatgtccctgccaactgagctatgttcacggggaca 6219347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 9031810 - 9031760
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||| ||||||||| |||||||| ||||||||  ||||||||||    
T  9031810 cctgcatataacaatgcatgtccctgccaactgagctatgttcacggggac 9031760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 19680282 - 19680328
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaa 150  Q
    |||||||||| ||||||||||||||||| ||||||||| | ||||||    
T  19680282 gggttcgaaccccggctcctgcatataacaatgcatgtccatgccaa 19680328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 31411109 - 31411159
Alignment:
Q  118 gctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||| |||||||||||||||||||||| ||| |||| ||| ||||||||    
T  31411109 gctcctacatataataatgcatgttcctgtcaactgagttatgctcacggg 31411159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 8176055 - 8175990
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||| |  ||||||||||| |||||||||  ||| ||| |||||||| |||||||||||    
T  8176055 gttcgaacaccagtccctgcatataacaatgcatgtctctgtcaactgagctatgctcacggggac 8175990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 2955137 - 2955205
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||| ||| || || ||||||||||||||||||||| |||| ||  ||| |||| |||||||||||    
T  2955137 agggttcaaacccctgcccctgcatataataatgcatgtccctggcatctgaactatgctcacggggac 2955205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 6144025 - 6143958
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||| | ||| ||||||||||||||| || |||||||| |||||||| |||||||||||    
T  6144025 gggttcgaac-ccgacccctacatataataatgcattgtccctgccaactgagctatgctcacggggac 6143958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 9491769 - 9491833
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| ||| |||||||||||||||  |||| |||| |||| ||| ||||||||    
T  9491769 gggttcgaaccccggcccctacatataataatgcattgtcctaccaactgagttatgctcacggg 9491833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 24470425 - 24470493
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| |||| ||||||||||||| |||  ||||||| |||||||| || ||||||||    
T  24470425 gggttcgaactccggcccctgtatataataatgcattgtctctgccaactgagctatgcttacggggac 24470493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 19137680 - 19137613
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||  |||| ||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  19137680 gggttcgaacctcggcccctgcatataacaatgcatgttcctgccaactgagctatgctcacggggac 19137613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 27183715 - 27183786
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaaa 174  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||    
T  27183715 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaaa 27183786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 9625044 - 9624974
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggacaa 173  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| |||||||| |||||||||||||    
T  9625044 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaa 9624974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 14868746 - 14868678
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||| |||||||| |||||||||||    
T  14868746 gggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 14868678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 51017851 - 51017791
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactca 164  Q
    |||||||||| ||| ||||||||||||| ||||||||| |||||||| |||||||||||||    
T  51017851 gggttcgaactccgactcctgcatataacaatgcatgtccctgccaactgagctatactca 51017791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 16874225 - 16874292
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||  |||| ||||||||||| ||||||||| |||||||| |||||||| ||||||||||||    
T  16874225 ggttcgaacctcggcccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 16874292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 43774246 - 43774177
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||| | ||||||||||| ||||||| || |||||||| |||||||||||||||||||||    
T  43774246 gggttcgaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatactcacggggaca 43774177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 36331760 - 36331824
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacgg 167  Q
    |||||||||| ||| | |||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  36331760 gggttcgaaccccgacccctgcatataataatgcattgtccctgccaattgagctatgctcacgg 36331824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 36476420 - 36476352
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| |||||||||||||||||| ||| | ||||||||||| ||| |||||||||||    
T  36476420 gggttcgaactccggcccctgcatataataatgcattgtccgtgccaattgagttatgctcacggggac 36476352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 47191434 - 47191366
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| || || |||||||||||||||||| ||| |||||||| |||||||| |||||||||||    
T  47191434 gggttcgaactccagcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 47191366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 5164189 - 5164256
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaa 173  Q
    |||||||  |||| |||| |||||||||||| |||||||||| ||||||||||| ||||| |||||||    
T  5164189 gttcgaaacccggatcctacatataataatgaatgttcctgcaaattgagctatgctcactgggacaa 5164256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 26583160 - 26583093
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaa 173  Q
    |||||||| ||| | ||||||||||||||||||||| |||| |||||||| |||  ||||||||||||    
T  26583160 gttcgaaccccgacccctgcatataataatgcatgtccctgtcaattgagttatgatcacggggacaa 26583093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 12236643 - 12236593
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||||||||||||| |||||||| |||||||  |||||||||||    
T  12236643 cctgcatataataatgcatgtccctgccaactgagctacgctcacggggac 12236593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 34503272 - 34503214
Alignment:
Q  108 tcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacg 166  Q
    |||||| |||||||||||||||||||||||||  |||| |||| |||||||| ||||||    
T  34503272 tcgaaccccggctcctgcatataataatgcattgtcctaccaactgagctatgctcacg 34503214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 10959194 - 10959125
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggaca 172  Q
    |||||||||| ||||| |||  |||||||||||||| || |||||||| |||||||| ||||||||||||    
T  10959194 gggttcgaaccccggcccctatatataataatgcattgtccctgccaactgagctatgctcacggggaca 10959125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 14417929 - 14417869
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactca 164  Q
    |||||||||| || || |||||||||||||||||||  |||| ||||||||||||| ||||    
T  14417929 gggttcgaactccagcccctgcatataataatgcattgtcctaccaattgagctatgctca 14417869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 24751294 - 24751358
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| | || |||||||| ||||||||    
T  24751294 gggttcgaaccccggcccctgcatataataatgcattgtcctactaactgagctatgctcacggg 24751358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 33206818 - 33206754
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| || || |||||||||||||||||||  |||| |||| |||||||| ||||||||    
T  33206818 gggttcgaaccccagcccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 33206754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 40160776 - 40160728
Alignment:
Q  124 gcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    |||||||| ||||||||| ||||||||||||||||| |||||| |||||    
T  40160776 gcatataacaatgcatgtccctgccaattgagctatgctcacgaggaca 40160728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 49639089 - 49639025
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| ||| |||||||||||||||  |||| |||| |||||||| ||||||||    
T  49639089 gggttcgaaccccggcccctacatataataatgcattgtcctaccaactgagctatgctcacggg 49639025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 52030182 - 52030114
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| ||||||||||||||| || ||| |||||||| |||| ||| |||||||||||    
T  52030182 gggttcgaaccccggcccctgcatataataatacattgtccctgccaactgagttatgctcacggggac 52030114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 16278002 - 16278049
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||||||||||||| |||| |||| |||||||| ||||||||    
T  16278002 cctgcatataataatgcatggtcctaccaactgagctatgctcacggg 16278049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 17440000 - 17440063
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    ||||| ||||||||| |||||||||||||||||||  |||| ||||  ||||||| ||||||||    
T  17440000 ggttcaaacaccggcccctgcatataataatgcattgtcctaccaaccgagctatgctcacggg 17440063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 20244195 - 20244140
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctat 159  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||| ||||||||    
T  20244195 gggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctat 20244140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 31108794 - 31108861
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| || || |||||||||||| |||||||| |||||||| |||| ||| ||||| |||||    
T  31108794 gggttcgaaccccagcccctgcatataattatgcatgtccctgccaactgagttatgctcacagggac 31108861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 49447202 - 49447136
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgc-atgttcctgccaattgagctatactcacgggga 170  Q
    |||||||||| |||||||||||||||||| |||| || | ||| |||| |||||||||||||||||||    
T  49447202 gggttcgaaccccggctcctgcatataat-atgcaatatccctaccaactgagctatactcacgggga 49447136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 31698593 - 31698559
Alignment:
Q  105 ggttcgaacaccggctcctgcatataataatgcat 139  Q
    ||||||||| |||||||||||||||||||||||||    
T  31698593 ggttcgaaccccggctcctgcatataataatgcat 31698559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 38507687 - 38507645
Alignment:
Q  126 atataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||||||||| |||||||| |||||||| ||||||||    
T  38507687 atataataatgcatgtccctgccaactgagctatgctcacggg 38507645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 41767819 - 41767873
Alignment:
Q  121 cctgcatataataatgcat-gttcctgccaattgagctatactcacggggacaaa 174  Q
    ||||||||||| ||||||| ||||||||||| ||| |||| ||||||||||||||    
T  41767819 cctgcatataacaatgcattgttcctgccaactgaactatgctcacggggacaaa 41767873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 42271049 - 42271111
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||| ||||| ||||||||||| |||||||  |||| |||| |||||||| ||||||||    
T  42271049 gttcgaaccccggcccctgcatataacaatgcattgtcctaccaactgagctatgctcacggg 42271111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 48659874 - 48659916
Alignment:
Q  125 catataataatgcatgttcctgccaattgagctatactcacgg 167  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||    
T  48659874 catataataatgcatgttcctaccaattgaactatacttacgg 48659916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 53598977 - 53599011
Alignment:
Q  122 ctgcatataataatgcatgttcctgccaattgagc 156  Q
    ||||||||||||||||||||||||||||| |||||    
T  53598977 ctgcatataataatgcatgttcctgccaactgagc 53599011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 6951841 - 6951890
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacgggga 170  Q
    ||||||||||||||||||||| |||| ||| |||| ||| ||||||||||    
T  6951841 cctgcatataataatgcatgtccctgtcaactgagttatgctcacgggga 6951890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 23237421 - 23237368
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctat 159  Q
    |||||||| ||| | ||| ||||||||||||||||| |||||||| ||||||||    
T  23237421 gttcgaactccgacccctacatataataatgcatgtccctgccaactgagctat 23237368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 24130620 - 24130551
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggacaa 173  Q
    |||||| ||| ||| | ||||||||||| |||| |||| |||||||| |||| ||| |||||||||||||    
T  24130620 gggttcaaaccccgtcccctgcatataacaatgtatgtccctgccaactgagttatgctcacggggacaa 24130551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 3955350 - 3955302
Alignment:
Q  121 cctgcatataataatgca-tgttcctgccaattgagctatactcacggg 168  Q
    |||||||||||||||||| ||| |||| |||||||||||| ||||||||    
T  3955350 cctgcatataataatgcattgtccctgtcaattgagctatgctcacggg 3955302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 4478405 - 4478469
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    ||||||| ||| | ||||||||||||||||||||||| | | || |||||||| ||||| |||||    
T  4478405 ttcgaaccccgacccctgcatataataatgcatgttcatactaactgagctatgctcacagggac 4478469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 13539998 - 13540062
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||  | ||| |||||||||||||||  |||| |||| |||||||||||||||||    
T  13539998 gggttcgaaccccaacccctacatataataatgcattgtcctaccaactgagctatactcacggg 13540062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 16999987 - 16999943
Alignment:
Q  106 gttcgaacaccggctcctgcatataataatgcatgttcctgccaa 150  Q
    |||||||| ||||| ||| ||||||||||||||||| ||||||||    
T  16999987 gttcgaactccggcccctacatataataatgcatgtccctgccaa 16999943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 19540402 - 19540342
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactca 164  Q
    |||||||||| || ||||||||||||||||||| ||  |||| |||| |||||||| ||||    
T  19540402 gggttcgaaccccagctcctgcatataataatgtattgtcctaccaactgagctatgctca 19540342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 47497131 - 47497079
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggacaa 173  Q
    |||||||||||| | |||||| |||||||| |||| |||||||| ||||||||    
T  47497131 cctgcatataattacgcatgtccctgccaactgagttatactcaaggggacaa 47497079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 49443429 - 49443496
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| |||||||| ||| ||||| ||| |||||||||||||||| ||||| ||||||    
T  49443429 gggttcgaactccggcccctgcata-aattatgcaatgtccctgccaattgagctaaactcatggggac 49443496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 51412027 - 51412079
Alignment:
Q  107 ttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctat 159  Q
    ||||||| ||| ||||||||||||| ||||||||| |||||||| ||| ||||    
T  51412027 ttcgaaccccgactcctgcatataacaatgcatgtccctgccaactgaactat 51412079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 25087 - 25019
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| || || |||||||||||||||||| ||| |||||||| |||||||| |||||||||||    
T  25087 gggttcgaaccccagcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 25019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 440456 - 440404
Alignment:
Q  108 tcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctata 160  Q
    |||||| ||||| ||| |||||||||||||||||||||||||| |||||||||    
T  440456 tcgaaccccggcccctacatataataatgcatgttcctgccaactgagctata 440404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 7137 - 7069
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgca-tgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||  ||| |||||||| |||||||||||    
T  7137 gggttcgaaccccggcccctgcatataataatgcattgtccctaacaactgagctatgctcacggggac 7069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 21911 - 21843
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| ||  | ||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||    
T  21911 gggttcgaaccccaacccctgcatataataatacattgtttctgccaactgagctatactcacggggac 21843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 17965 - 18033
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| || || ||||||||||| ||||||| || ||| ||||||||||||| |||||||||||    
T  17965 gggttcgaaccccagcccctgcatataacaatgcattgtccctaccaattgagctatgctcacggggac 18033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 101892 - 101828
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggg 168  Q
    |||||||||| ||||| |||||||||||||||||||  |||| |||  |||||||| ||||||||    
T  101892 gggttcgaaccccggcccctgcatataataatgcattatcctaccagctgagctatgctcacggg 101828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 4856 - 4907
Alignment:
Q  121 cctgcatataataatgcat-gttcctgccaattgagctatactcacggggac 171  Q
    ||||||||||||||||||| || |||||||| |||||||| |||||||||||    
T  4856 cctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 4907  T

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Target: scaffold0712 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 4564 - 4513
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    ||||||||||| ||||||||| |||||||| |||||||| ||||||| ||||    
T  4564 cctgcatataacaatgcatgtccctgccaactgagctatgctcacggagaca 4513  T

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Target: scaffold0709 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 4584 - 4533
Alignment:
Q  121 cctgcatataataatgcatgttcctgccaattgagctatactcacggggaca 172  Q
    ||||||||||| ||||||||| |||||||| |||||||| ||||||| ||||    
T  4584 cctgcatataacaatgcatgtccctgccaactgagctatgctcacggagaca 4533  T

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Target: scaffold0334 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 5364 - 5310
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctat 159  Q
    |||||||||||| ||| |||||||||||||||||||  |||| |||||||||||||    
T  5364 gggttcgaacac-ggcccctgcatataataatgcattgtcctaccaattgagctat 5310  T

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Target: scaffold0119 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 1100 - 1033
Alignment:
Q  104 gggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||||||| || || ||| |||||||| |||||||| ||| |||| |||||||| |||||||||||    
T  1100 gggttcgaaccccagcccctacatataattatgcatgtccctaccaactgagctatgctcacggggac 1033  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 159
Target Start/End: Original strand, 108412 - 108451
Alignment:
Q  121 cctgcatataataatgcat-gttcctgccaattgagctat 159  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  108412 cctgcatataataatgcattgttcctgccaattgagctat 108451  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 24994 - 25062
Alignment:
Q  103 agggttcgaacaccggctcctgcatataataatgcatgttcctgccaattgagctatactcacggggac 171  Q
    |||||| |||| ||||| ||||||||||| | |||||||  ||||||| |||| ||| |||||||||||    
T  24994 agggtttgaaccccggcccctgcatataacattgcatgtctctgccaactgagatatgctcacggggac 25062  T

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