View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10496_high_29 (Length: 235)
Name: NF10496_high_29
Description: NF10496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10496_high_29 |
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Alignment Details
Target: chr4 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 45759000 - 45759146
Alignment:
| Q |
68 |
tccaagactaacgaacttattcctccaactacccgatgttttcttcaaaacttcaacaactaatttccacattcggagcctcctcagattggctcccact |
167 |
Q |
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| T |
45759000 |
tccaagactaacgaacttattcctccaactacccgatgttttctccaaaacttcaacaactaatttccacattcggagcctcctcagattggctcccact |
45759099 |
T |
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| Q |
168 |
gacaaatcgaggtaaataaaggtgattttatccatttttcacttaag |
214 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
45759100 |
gacaaatcgaggtaaataaaggggattttatccatttttcacttaag |
45759146 |
T |
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