View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10496_high_31 (Length: 231)
Name: NF10496_high_31
Description: NF10496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10496_high_31 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 2131091 - 2131305
Alignment:
| Q |
1 |
actcgcatgcaaggtgtgcgcatcttaggcctccttcacttgacatgttcacttttgacttgcaattgggacttgagacaagattctcctaaattttatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2131091 |
actcgcatgcaaggtgtgcgcatcttaggcctccttcacttgacatgttcacttttgacttgcaattgggacttgagacaagattctcctaaattttatg |
2131190 |
T |
|
| Q |
101 |
gacttcatatctttgttgtgattttcttcatacttttataacattcacaggacatcttttgatcagatcaaactattggtctataccaaaaagactaaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2131191 |
gacttcatatctttgttgtgattttcttcatacttttataacattcacaggacatcttttgatcagatcaaactattggtctataccaaaaagactaaga |
2131290 |
T |
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| Q |
201 |
caccatatagagttg |
215 |
Q |
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||||||||||||||| |
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| T |
2131291 |
caccatatagagttg |
2131305 |
T |
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