View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10496_low_4 (Length: 579)

Name: NF10496_low_4
Description: NF10496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10496_low_4
NF10496_low_4
[»] chr7 (47 HSPs)
chr7 (22-562)||(11242191-11242731)
chr7 (22-520)||(11268680-11269197)
chr7 (22-520)||(11281004-11281517)
chr7 (433-516)||(6847702-6847787)
chr7 (112-249)||(6847989-6848127)
chr7 (441-501)||(1941581-1941641)
chr7 (449-495)||(6712334-6712380)
chr7 (440-494)||(8787178-8787232)
chr7 (449-498)||(15061402-15061451)
chr7 (433-496)||(1751127-1751190)
chr7 (440-495)||(3376405-3376460)
chr7 (440-495)||(21005415-21005470)
chr7 (449-495)||(538157-538203)
chr7 (449-495)||(545031-545077)
chr7 (449-495)||(821389-821435)
chr7 (449-495)||(826402-826448)
chr7 (449-495)||(828413-828459)
chr7 (449-495)||(4158572-4158618)
chr7 (449-495)||(4466554-4466600)
chr7 (449-495)||(5840819-5840865)
chr7 (449-495)||(8713137-8713183)
chr7 (449-495)||(8718641-8718687)
chr7 (440-494)||(8780339-8780393)
chr7 (449-495)||(9004766-9004812)
chr7 (449-495)||(9009751-9009797)
chr7 (449-495)||(9258523-9258569)
chr7 (449-495)||(9311684-9311730)
chr7 (449-495)||(12548205-12548251)
chr7 (449-495)||(14229848-14229894)
chr7 (449-495)||(15916190-15916236)
chr7 (449-495)||(15924499-15924545)
chr7 (449-495)||(16330782-16330828)
chr7 (449-495)||(18389808-18389854)
chr7 (449-495)||(19014539-19014585)
chr7 (449-495)||(19364547-19364593)
chr7 (449-495)||(23203939-23203985)
chr7 (449-495)||(23510066-23510112)
chr7 (440-494)||(33609867-33609921)
chr7 (449-495)||(37100257-37100303)
chr7 (440-494)||(39388877-39388931)
chr7 (433-501)||(6531399-6531468)
chr7 (449-494)||(15066491-15066536)
chr7 (518-562)||(1864610-1864654)
chr7 (518-562)||(11268551-11268595)
chr7 (518-562)||(11281602-11281646)
chr7 (518-562)||(14925823-14925867)
chr7 (518-562)||(15349289-15349333)
[»] chr1 (32 HSPs)
chr1 (216-432)||(12727187-12727395)
chr1 (239-333)||(17735150-17735244)
chr1 (103-249)||(27318397-27318544)
chr1 (433-518)||(27318718-27318803)
chr1 (433-496)||(8236384-8236448)
chr1 (160-247)||(8236099-8236186)
chr1 (433-496)||(17734986-17735049)
chr1 (433-520)||(12727068-12727157)
chr1 (343-398)||(17735099-17735155)
chr1 (432-498)||(52755236-52755303)
chr1 (449-495)||(21924812-21924858)
chr1 (449-498)||(36850245-36850294)
chr1 (518-562)||(16527389-16527433)
chr1 (526-562)||(28553606-28553642)
chr1 (440-495)||(25727092-25727147)
chr1 (440-495)||(25735500-25735555)
chr1 (449-495)||(2386379-2386425)
chr1 (449-495)||(3985407-3985453)
chr1 (449-495)||(3990686-3990732)
chr1 (449-495)||(8649018-8649064)
chr1 (449-495)||(13250887-13250933)
chr1 (449-495)||(16485428-16485474)
chr1 (440-498)||(19788171-19788229)
chr1 (449-495)||(27047589-27047635)
chr1 (449-495)||(27911222-27911268)
chr1 (449-495)||(38045486-38045532)
chr1 (449-495)||(41802424-41802470)
chr1 (449-495)||(46143434-46143480)
chr1 (449-495)||(49379537-49379583)
chr1 (449-498)||(17986709-17986758)
chr1 (449-494)||(39286525-39286570)
chr1 (449-498)||(41461877-41461926)
[»] chr8 (33 HSPs)
chr8 (66-225)||(9798655-9798816)
chr8 (67-216)||(15201683-15201837)
chr8 (433-517)||(9798347-9798431)
chr8 (378-421)||(9798472-9798515)
chr8 (449-495)||(31469554-31469600)
chr8 (447-495)||(9317986-9318034)
chr8 (440-495)||(21319566-21319621)
chr8 (440-495)||(22285118-22285173)
chr8 (449-495)||(1685806-1685852)
chr8 (449-495)||(6570471-6570517)
chr8 (449-495)||(14351544-14351590)
chr8 (449-495)||(14878187-14878233)
chr8 (449-495)||(17126987-17127033)
chr8 (449-495)||(18264284-18264330)
chr8 (449-495)||(18273297-18273343)
chr8 (449-495)||(19997535-19997581)
chr8 (449-495)||(20038371-20038417)
chr8 (449-495)||(20044026-20044072)
chr8 (449-495)||(21103528-21103574)
chr8 (449-495)||(22370699-22370745)
chr8 (440-494)||(23503277-23503331)
chr8 (449-495)||(25751599-25751645)
chr8 (449-495)||(26854221-26854267)
chr8 (449-495)||(29325452-29325498)
chr8 (449-495)||(35996235-35996281)
chr8 (449-495)||(43836170-43836216)
chr8 (449-494)||(21105571-21105616)
chr8 (452-501)||(27933242-27933291)
chr8 (449-494)||(29003784-29003829)
chr8 (526-562)||(13539621-13539657)
chr8 (526-562)||(13684817-13684853)
chr8 (440-496)||(18008279-18008335)
chr8 (449-493)||(21939378-21939422)
[»] chr3 (41 HSPs)
chr3 (113-249)||(16999332-16999468)
chr3 (433-517)||(13832967-13833058)
chr3 (462-520)||(16999029-16999087)
chr3 (378-421)||(13833099-13833142)
chr3 (440-495)||(20225122-20225177)
chr3 (449-498)||(14071603-14071652)
chr3 (440-495)||(11399023-11399078)
chr3 (440-495)||(11827301-11827356)
chr3 (440-495)||(17041863-17041918)
chr3 (440-495)||(22038987-22039042)
chr3 (440-495)||(43496342-43496397)
chr3 (440-494)||(1993594-1993648)
chr3 (449-495)||(2781396-2781442)
chr3 (449-495)||(3279988-3280034)
chr3 (449-495)||(3338639-3338685)
chr3 (449-495)||(4768906-4768952)
chr3 (449-495)||(4830203-4830249)
chr3 (449-495)||(6710194-6710240)
chr3 (449-495)||(6809815-6809861)
chr3 (449-495)||(6815637-6815683)
chr3 (449-495)||(9360373-9360419)
chr3 (449-495)||(12246954-12247000)
chr3 (449-495)||(13087671-13087717)
chr3 (449-495)||(13093856-13093902)
chr3 (449-495)||(13418539-13418585)
chr3 (449-495)||(15425060-15425106)
chr3 (449-495)||(15430006-15430052)
chr3 (449-495)||(15854357-15854403)
chr3 (449-495)||(16385347-16385393)
chr3 (449-495)||(17023404-17023450)
chr3 (449-495)||(22164612-22164658)
chr3 (449-495)||(22169916-22169962)
chr3 (449-495)||(24697007-24697053)
chr3 (449-495)||(25055170-25055216)
chr3 (449-495)||(25765725-25765771)
chr3 (449-495)||(41473073-41473119)
chr3 (449-495)||(43841956-43842002)
chr3 (449-495)||(53354694-53354740)
chr3 (449-494)||(4365997-4366042)
chr3 (449-494)||(4383526-4383571)
chr3 (449-494)||(13098461-13098506)
[»] chr5 (33 HSPs)
chr5 (140-249)||(42687841-42687950)
chr5 (177-244)||(20684884-20684951)
chr5 (455-520)||(42687542-42687607)
chr5 (433-506)||(20055252-20055325)
chr5 (381-416)||(20055180-20055215)
chr5 (440-495)||(20738496-20738551)
chr5 (440-495)||(22948713-22948768)
chr5 (449-495)||(7761007-7761053)
chr5 (449-495)||(15732091-15732137)
chr5 (449-495)||(15736310-15736356)
chr5 (449-495)||(18613180-18613226)
chr5 (449-495)||(20595222-20595268)
chr5 (449-495)||(20790115-20790161)
chr5 (449-495)||(20795896-20795942)
chr5 (449-495)||(20832364-20832410)
chr5 (449-495)||(21734509-21734555)
chr5 (449-495)||(21812152-21812198)
chr5 (449-495)||(23435475-23435521)
chr5 (449-495)||(23446842-23446888)
chr5 (449-495)||(23618368-23618414)
chr5 (449-495)||(23685000-23685046)
chr5 (449-495)||(23849765-23849811)
chr5 (449-495)||(23973102-23973148)
chr5 (440-494)||(24165395-24165449)
chr5 (449-495)||(24935621-24935667)
chr5 (449-495)||(24941313-24941359)
chr5 (449-495)||(26848421-26848467)
chr5 (440-494)||(34223012-34223066)
chr5 (449-495)||(34780459-34780505)
chr5 (449-495)||(41765679-41765725)
chr5 (317-429)||(42687654-42687771)
chr5 (450-495)||(12410677-12410722)
chr5 (451-495)||(23771076-23771120)
[»] chr2 (20 HSPs)
chr2 (433-506)||(21511815-21511888)
chr2 (433-486)||(21516314-21516367)
chr2 (433-496)||(23482639-23482702)
chr2 (375-427)||(35406551-35406603)
chr2 (449-498)||(36684447-36684496)
chr2 (518-562)||(21511673-21511717)
chr2 (440-495)||(23340708-23340763)
chr2 (440-495)||(24507446-24507501)
chr2 (440-495)||(28496586-28496641)
chr2 (449-495)||(20172708-20172754)
chr2 (449-495)||(20282197-20282243)
chr2 (449-495)||(21468340-21468386)
chr2 (440-494)||(23698700-23698754)
chr2 (440-494)||(24366196-24366250)
chr2 (449-495)||(25358287-25358333)
chr2 (449-495)||(25370230-25370276)
chr2 (452-498)||(27745219-27745265)
chr2 (449-494)||(23139892-23139937)
chr2 (449-494)||(23551682-23551727)
chr2 (450-495)||(32140122-32140167)
[»] chr4 (31 HSPs)
chr4 (444-506)||(21276770-21276832)
chr4 (441-501)||(15048141-15048201)
chr4 (441-501)||(15106223-15106283)
chr4 (449-506)||(17464992-17465049)
chr4 (449-495)||(12347523-12347569)
chr4 (433-522)||(26493219-26493308)
chr4 (518-562)||(12634301-12634345)
chr4 (131-206)||(21276696-21276772)
chr4 (440-495)||(7197364-7197419)
chr4 (381-416)||(17464909-17464944)
chr4 (454-501)||(36709600-36709646)
chr4 (449-495)||(3371768-3371814)
chr4 (449-495)||(3419206-3419252)
chr4 (449-495)||(6518521-6518567)
chr4 (440-494)||(9857350-9857404)
chr4 (449-495)||(9945090-9945136)
chr4 (449-495)||(10631517-10631563)
chr4 (440-494)||(12808074-12808128)
chr4 (453-495)||(13883359-13883401)
chr4 (449-495)||(14653378-14653424)
chr4 (449-495)||(14690727-14690773)
chr4 (449-495)||(16683510-16683556)
chr4 (449-495)||(18078829-18078875)
chr4 (449-494)||(5717537-5717582)
chr4 (449-494)||(18080848-18080893)
chr4 (449-493)||(3392093-3392137)
chr4 (439-495)||(10731280-10731336)
chr4 (439-495)||(10945049-10945105)
chr4 (449-501)||(17295524-17295575)
chr4 (449-493)||(36654250-36654294)
chr4 (518-562)||(55268081-55268125)
[»] chr6 (21 HSPs)
chr6 (440-495)||(23523836-23523891)
chr6 (440-495)||(25964058-25964113)
chr6 (440-495)||(25968705-25968760)
chr6 (449-495)||(13168526-13168572)
chr6 (440-495)||(5399371-5399426)
chr6 (440-495)||(18396388-18396443)
chr6 (440-495)||(20218364-20218419)
chr6 (440-495)||(22112389-22112444)
chr6 (449-495)||(4188292-4188338)
chr6 (449-495)||(8603651-8603697)
chr6 (449-495)||(15700333-15700379)
chr6 (449-495)||(17743654-17743700)
chr6 (449-495)||(19075237-19075283)
chr6 (449-495)||(22005916-22005962)
chr6 (449-495)||(25786255-25786301)
chr6 (440-494)||(26138804-26138858)
chr6 (440-498)||(30245344-30245402)
chr6 (449-494)||(4741136-4741181)
chr6 (449-494)||(20993661-20993706)
chr6 (529-562)||(31817651-31817684)
chr6 (453-497)||(28973997-28974041)
[»] scaffold0094 (1 HSPs)
scaffold0094 (449-495)||(1802-1848)
[»] scaffold0197 (1 HSPs)
scaffold0197 (440-496)||(8716-8772)
[»] scaffold0031 (1 HSPs)
scaffold0031 (440-495)||(77972-78027)
[»] scaffold1092 (1 HSPs)
scaffold1092 (449-495)||(1572-1618)
[»] scaffold1058 (1 HSPs)
scaffold1058 (449-495)||(2949-2995)
[»] scaffold0816 (1 HSPs)
scaffold0816 (449-495)||(1223-1269)
[»] scaffold0673 (1 HSPs)
scaffold0673 (449-495)||(3107-3153)
[»] scaffold0624 (1 HSPs)
scaffold0624 (449-495)||(4830-4876)
[»] scaffold0607 (1 HSPs)
scaffold0607 (449-495)||(9658-9704)
[»] scaffold0489 (1 HSPs)
scaffold0489 (449-495)||(821-867)
[»] scaffold0230 (2 HSPs)
scaffold0230 (449-495)||(8887-8933)
scaffold0230 (449-495)||(16413-16459)
[»] scaffold0215 (1 HSPs)
scaffold0215 (449-495)||(32-78)
[»] scaffold0146 (1 HSPs)
scaffold0146 (449-495)||(38219-38265)
[»] scaffold0111 (1 HSPs)
scaffold0111 (449-495)||(34937-34983)
[»] scaffold0075 (1 HSPs)
scaffold0075 (449-495)||(19585-19631)
[»] scaffold0071 (2 HSPs)
scaffold0071 (449-495)||(32186-32232)
scaffold0071 (449-495)||(37132-37178)
[»] scaffold0035 (2 HSPs)
scaffold0035 (449-495)||(14471-14517)
scaffold0035 (449-495)||(49919-49965)
[»] scaffold0029 (2 HSPs)
scaffold0029 (449-495)||(117904-117950)
scaffold0029 (449-495)||(124148-124194)
[»] scaffold0022 (1 HSPs)
scaffold0022 (449-495)||(33274-33320)
[»] scaffold0004 (1 HSPs)
scaffold0004 (449-495)||(369403-369449)
[»] scaffold0168 (1 HSPs)
scaffold0168 (449-498)||(8741-8790)


Alignment Details
Target: chr7 (Bit Score: 517; Significance: 0; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 517; E-Value: 0
Query Start/End: Original strand, 22 - 562
Target Start/End: Original strand, 11242191 - 11242731
Alignment:
Q  22 tgaatagttggaaaaacacacggtccttgctgaccatgtccaatattttaacacttggaagctgaaaagtgcacgatccggagaccgtgtgtttttgctg 121  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11242191 tgaatagctggaaaaacacacggtccttgctgaccatgtccaatattttaacacttggaagctgaaaagtgcacgatccggagaccgtatgtttttgctg 11242290  T
Q  122 tcagcaagagctgttagaaaactctttggttttcctattttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaataggtct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11242291 tcagcaagagctgttagaaaactctttggttttcctattttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaataggtct 11242390  T
Q  222 tccatcatacctgtaatcatcttggaatcttgtgaacttgttttagattgaatcaaacttaacattgttctaagtttattcttgcttttattttgtgcac 321  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11242391 tccatcatacctgtaatcattttggaatcttgtgaacttgttttagattgaatcaaacttaacattgttctaagtttattcttgattttattttgtgcac 11242490  T
Q  322 tttacattcttgaattttactttcttgttctttatatttatgcaatttatcttcaacaatttacattcagtcatttacaattatacaatttatttctatg 421  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11242491 tttacattcttgaatgttactttcttgttctttatatttatgcaatttatcttcagcaatttacattcagtcatttacaattatacaatttatttctatg 11242590  T
Q  422 cctttttacttagtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaattt 521  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11242591 cctttttacttagtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaattt 11242690  T
Q  522 gatcatctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11242691 gatcatctcaaatatcaaacgaatgaccgaaaggtgaagtt 11242731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 22 - 520
Target Start/End: Complemental strand, 11269197 - 11268680
Alignment:
Q  22 tgaatagttggaaaaacacacggtccttgctga-ccatgtccaatattttaacacttggaagctgaaaagtgcacgatccgg-----agaccgtgtgttt 115  Q
    ||||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| | || |      || ||||| ||||    
T  11269197 tgaatagctggaaaaacacacggtccttgctaatccatgtccagtattttaacacttggaagctgaaaagtgcatggtctgctatgcaggccgtgcgttt 11269098  T
Q  116 ttgctgtcagcaagagctgttagaaaactctttggttttcctattttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaat 215  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||| | |||||||| |  |||||||| |||||||||| |||||||||| ||||||     
T  11269097 ttgctgttagctagagctgttacaaaactctttggttttcctatttttatgcttgtaa-tatgagtttaaggcattgtcttaaggttttaggttataaaa 11268999  T
Q  216 aggtcttccatcatacctgtaatcatcttggaatcttgtgaacttgttttagattgaatcaaacttaacattgttctaagtttattcttgcttttatttt 315  Q
    ||||||||||||| || ||||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  11268998 aggtcttccatcaaacttgtaatcatcttggaatccagtgaacttattttagattgaatcaaagttaacattgttatgagtttattcttgcttttatttt 11268899  T
Q  316 gtgcactttacattcttgaattttactttcttgtt--------------ctttatatttatgcaatttatcttcaacaatttacattcagtcatttacaa 401  Q
    |||||||||||| ||||||| ||||||||||||||               ||||||||||||||||||||||||| ||||||||||||||||||    ||    
T  11268898 gtgcactttacactcttgaactttactttcttgtttttattttattttattttatatttatgcaatttatcttcagcaatttacattcagtcat----aa 11268803  T
Q  402 ttatacaatttatttctatgcctttttacttagtagaccttctagtattgggattgttggaatagtc----taatgacttaatcctattcaaaccaagtt 497  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||    |||||||||||| |||||||||||||||     
T  11268802 ttatgcaatttatttctatgcctttttacttagtagactttctagtcttgggaatgttggaatagtctaattaatgacttaattctattcaaaccaagtc 11268703  T
Q  498 tagatatcttttttgtttaaatt 520  Q
    ||||||||| | |||||||||||    
T  11268702 tagatatctatgttgtttaaatt 11268680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 22 - 520
Target Start/End: Original strand, 11281004 - 11281517
Alignment:
Q  22 tgaatagttggaaaaacacacggtccttgctga-ccatgtccaatattttaacacttggaagctgaaaagtgcacgatccgg-----agaccgtgtgttt 115  Q
    ||||||| | ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| | || |      |  ||||| ||||    
T  11281004 tgaatagctagaaaaacacacggtccttgctaatccatgtccagtattttaacacttggaagctgaaaagtgcatggtctgttatgcaagccgtgcgttt 11281103  T
Q  116 ttgctgtcagcaagagctgttagaaaactctttggttttcctattttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaat 215  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||| |  |||||||||||||||| || |||||||||| ||||||     
T  11281104 ttgctgttagctagagctgttacaaaactctttggttttcctatttttaagcttgtaa-tatgagtttaatgcattgtgttaaggttttaggttataaaa 11281202  T
Q  216 aggtcttccatcatacctgtaatcatcttggaatcttgtgaacttgttttagattgaatcaaacttaacattgttctaagtttattcttgcttttatttt 315  Q
    ||||||||||||| || |||||||||||| |||||  |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  11281203 aggtcttccatcaaacttgtaatcatcttcgaatccggtgaacttgttttagattgaatcaaagttaacattgttatgagtttattcttgcttttatttt 11281302  T
Q  316 gtgcactttacattcttgaattttactttcttgttctt-----------------tatatttatgcaatttatcttcaacaatttacattcagtcattta 398  Q
    |||||||||||||||||||| |||||||||||||| ||                 |||||||| |||||||||||||||||||||||||||||||||       
T  11281303 gtgcactttacattcttgaactttactttcttgtttttttttttttttttttttctatatttacgcaatttatcttcaacaatttacattcagtcat--- 11281399  T
Q  399 caattatacaatttatttctatgcctttttacttagtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 498  Q
     |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||   |||||||||||||| ||||||||||||||| |    
T  11281400 -aattatgcaatttatttctatgcctttttacttagtagactttctagtcttgggaatgttggaa---tctaatgacttaattctattcaaaccaagtct 11281495  T
Q  499 agatatcttttttgtttaaatt 520  Q
    |||||||| |||||||||||||    
T  11281496 agatatctattttgtttaaatt 11281517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 433 - 516
Target Start/End: Complemental strand, 6847787 - 6847702
Alignment:
Q  433 agtagaccttctagtattgggattgttggaatagtctaatgactta--atcctattcaaaccaagtttagatatcttttttgttta 516  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||| || |||||| |||||||||    
T  6847787 agtagacctcctagttttgggattgttggaatagtctaatgacttaatatcctattcaaaccaagtctatatatctattttgttta 6847702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 249
Target Start/End: Complemental strand, 6848127 - 6847989
Alignment:
Q  112 gtttttgctgtcagcaagagctgttagaaaactctttggttttccta-ttttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggcta 210  Q
    |||||| |||||||   ||||| ||| ||||||||||| ||||| |  ||||||||| ||||||  |||||||||||| ||| ||||||||| |||||||    
T  6848127 gtttttcctgtcagttggagcttttacaaaactctttgattttctttgttttaaagcctgtaaaaacgagtttaatgccttgccttgaggttctaggcta 6848028  T
Q  211 taaataggtcttccatcatacctgtaatcatcttggaat 249  Q
    ||||||||||   ||||| || |||| ||||||||||||    
T  6848027 taaataggtccctcatcagacttgtattcatcttggaat 6847989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 501
Target Start/End: Complemental strand, 1941641 - 1941581
Alignment:
Q  441 ttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 501  Q
    ||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||    
T  1941641 ttctagtcttgggattgttggaatagtttaatgactgaattctattcaaaccaagtttaga 1941581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 6712380 - 6712334
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  6712380 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 6712334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 494
Target Start/End: Complemental strand, 8787232 - 8787178
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||| |||||||||    
T  8787232 cttcttgtattgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 8787178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 449 - 498
Target Start/End: Original strand, 15061402 - 15061451
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 498  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  15061402 ttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 15061451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 496
Target Start/End: Original strand, 1751127 - 1751190
Alignment:
Q  433 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 496  Q
    |||||||||| |||| ||| ||||||||||   ||||||||||| |||||||||||| ||||||    
T  1751127 agtagaccttttagtcttgagattgttggatgggtctaatgactaaatcctattcaagccaagt 1751190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Complemental strand, 3376460 - 3376405
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3376460 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3376405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Complemental strand, 21005470 - 21005415
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21005470 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21005415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 538203 - 538157
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  538203 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 538157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 545077 - 545031
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  545077 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 545031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 821389 - 821435
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  821389 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 821435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 826402 - 826448
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  826402 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 826448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 828413 - 828459
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  828413 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 828459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 4158618 - 4158572
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4158618 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4158572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 4466600 - 4466554
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4466600 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4466554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 5840819 - 5840865
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  5840819 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 5840865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 8713137 - 8713183
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8713137 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8713183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 8718641 - 8718687
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8718641 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8718687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 494
Target Start/End: Complemental strand, 8780393 - 8780339
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  8780393 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 8780339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 9004766 - 9004812
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9004766 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9004812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 9009751 - 9009797
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9009751 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9009797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 9258569 - 9258523
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9258569 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9258523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 9311684 - 9311730
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9311684 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9311730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 12548251 - 12548205
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  12548251 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 12548205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 14229894 - 14229848
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14229894 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14229848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 15916236 - 15916190
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15916236 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15916190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 15924545 - 15924499
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15924545 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15924499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 16330828 - 16330782
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16330828 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16330782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 18389808 - 18389854
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18389808 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 18389854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 19014585 - 19014539
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19014585 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19014539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 19364547 - 19364593
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19364547 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19364593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 23203939 - 23203985
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23203939 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23203985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 23510066 - 23510112
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23510066 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23510112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 494
Target Start/End: Original strand, 33609867 - 33609921
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  33609867 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaa 33609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 37100303 - 37100257
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  37100303 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 37100257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 494
Target Start/End: Original strand, 39388877 - 39388931
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  39388877 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 39388931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 501
Target Start/End: Original strand, 6531399 - 6531468
Alignment:
Q  433 agtagaccttcta-gtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 501  Q
    |||| |||||||| || ||||||||||||||  |||||||||||| ||| |||||||| |||||| ||||    
T  6531399 agtataccttctatgtcttgggattgttggataagtctaatgactaaattctattcaagccaagtctaga 6531468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 15066491 - 15066536
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  15066491 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 15066536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 1864610 - 1864654
Alignment:
Q  518 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||| |||||||||||||||||||||| || |||||| |||||||    
T  1864610 atttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtt 1864654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 11268595 - 11268551
Alignment:
Q  518 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||| ||||||| |||||||||||||||||||| || ||||||||    
T  11268595 attttatcatcttaaatatcaaacgaatgaccggaaagtgaagtt 11268551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 11281602 - 11281646
Alignment:
Q  518 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||| ||||||| |||||| |||||||||||||||| ||||||||    
T  11281602 attttatcatcttaaatattaaacgaatgaccgaaaagtgaagtt 11281646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 14925823 - 14925867
Alignment:
Q  518 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||| |||||||||||||||||||||| || |||||| |||||||    
T  14925823 atttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtt 14925867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 15349289 - 15349333
Alignment:
Q  518 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||| |||||||||||||||||||||| || |||||| |||||||    
T  15349289 atttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtt 15349333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 1e-58; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 216 - 432
Target Start/End: Complemental strand, 12727395 - 12727187
Alignment:
Q  216 aggtcttccatcatacctgtaatcatcttggaatcttgtgaacttgttttagattgaatcaaacttaacattgttctaagtttattcttgctttt-attt 314  Q
    ||||| ||||||| |  |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  12727395 aggtcctccatcagatttgtaatcatcttggaatcttgtcaacttgtttttgattgaatcaaagttaacattgttctaagtttattcttgctttttattt 12727296  T
Q  315 tgtgcactttacattcttgaattttactttcttgttctttatatttatgcaatttatcttcaac-aatttacattcagtcatttacaattatacaattta 413  Q
    | ||||||| |          |||||||||||||||||||| ||||  ||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  12727295 tctgcacttca----------ttttactttcttgttctttacatttcagcaatttatcttccaccaatttacattcagtcatttacaattatacaattta 12727206  T
Q  414 tttctatgcctttttactt 432  Q
    |||||||||||||||||||    
T  12727205 tttctatgcctttttactt 12727187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 17735244 - 17735150
Alignment:
Q  239 catcttggaatcttgtgaacttgttttagattgaatcaaacttaacattgttctaagtttattcttgcttttattttgtgcactttacattcttg 333  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17735244 catcttggaatctggtgaacttgttttagattgaatcaaagttaatattgttctaagtttattcttgcttttattttctgcactttacattcttg 17735150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 27318397 - 27318544
Alignment:
Q  103 agaccgtgtgtttttgctgtcagcaagagctgttagaaaactctttggttttcc-tattttaaagcttgtaaatccgagtttaatgcattgtcttgaggt 201  Q
    |||||||| |||||||||||||||  ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||      
T  27318397 agaccgtgcgtttttgctgtcagctggagctgttacaaaactctttggttttccctattttaaagcttgtaaattcgagtttaatgccttgtcttgagaa 27318496  T
Q  202 tttaggctataaataggtcttccatcatacctgtaatcatcttggaat 249  Q
    | || | |||||||||||| ||| ||| |  |||||||||||||||||    
T  27318497 tctatgttataaataggtcctccgtcagatttgtaatcatcttggaat 27318544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 433 - 518
Target Start/End: Original strand, 27318718 - 27318803
Alignment:
Q  433 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaa 518  Q
    |||||||||| |||| || | |||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  27318718 agtagaccttttagtcttagaattgttggaacagtctaatgacttaatcctattcaaaccaagtttagatatatattttgtttaaa 27318803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 433 - 496
Target Start/End: Original strand, 8236384 - 8236448
Alignment:
Q  433 agtagaccttctagtatt-gggattgttggaatagtctaatgacttaatcctattcaaaccaagt 496  Q
    |||||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||    
T  8236384 agtagaccttttagtctttgggattgttggaatagtctaatgacttaatcttattcaaaccaagt 8236448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 8236099 - 8236186
Alignment:
Q  160 tttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaataggtcttccatcatacctgtaatcatcttgga 247  Q
    ||||||| |||||| | || ||||||||| ||||||||||||||||||||||||| || || ||||||| || |||||| ||||||||    
T  8236099 tttaaagattgtaatttcgtgtttaatgccttgtcttgaggttttaggctataaaaagatcatccatcagacttgtaatgatcttgga 8236186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 433 - 496
Target Start/End: Complemental strand, 17735049 - 17734986
Alignment:
Q  433 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 496  Q
    ||||||| ||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||    
T  17735049 agtagacgttctagtcttaggattgttgaaatagtctaatgactaaatcctattcaaaccaagt 17734986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 433 - 520
Target Start/End: Complemental strand, 12727157 - 12727068
Alignment:
Q  433 agtagaccttctagtattgggattgtt--ggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaatt 520  Q
    |||| |||||||||| |||| ||| ||  |||||||||||||||||||||||||||||||  |||| ||||||||| ||||| |||||||    
T  12727157 agtaaaccttctagtcttggaattttttaggaatagtctaatgacttaatcctattcaaattaagtctagatatctattttggttaaatt 12727068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 17735155 - 17735099
Alignment:
Q  343 ttcttgttctttatatttatgcaatttatcttc-aacaatttacattcagtcattta 398  Q
    |||||||||||||||||| |||||||||||||| | ||||||| |||||||||||||    
T  17735155 ttcttgttctttatatttttgcaatttatcttctagcaatttatattcagtcattta 17735099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 432 - 498
Target Start/End: Complemental strand, 52755303 - 52755236
Alignment:
Q  432 tagtagac-cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 498  Q
    |||||||| ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  52755303 tagtagactcttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 52755236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 21924812 - 21924858
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||||    
T  21924812 ttgggattgttagatgagtctaatgacttaatcctattcaaaccaag 21924858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 449 - 498
Target Start/End: Complemental strand, 36850294 - 36850245
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 498  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  36850294 ttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 36850245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 16527433 - 16527389
Alignment:
Q  518 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||    
T  16527433 atttcatcatctcaaatatcaaacgaatgatcgaaagatgaagtt 16527389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 526 - 562
Target Start/End: Original strand, 28553606 - 28553642
Alignment:
Q  526 atctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    ||||||||||||||||||| |||||||||||||||||    
T  28553606 atctcaaatatcaaacgaaggaccgaaaggtgaagtt 28553642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 25727092 - 25727147
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25727092 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25727147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 25735500 - 25735555
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25735500 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25735555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 2386379 - 2386425
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  2386379 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 2386425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 3985407 - 3985453
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3985407 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3985453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 3990686 - 3990732
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3990686 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3990732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 8649018 - 8649064
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8649018 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8649064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 13250887 - 13250933
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13250887 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 13250933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 16485428 - 16485474
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16485428 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16485474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Complemental strand, 19788229 - 19788171
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 498  Q
    ||||| || ||||||||||||||   |||||||||| |||||||| |||||||||||||    
T  19788229 cttcttgtcttgggattgttggatatgtctaatgacataatcctaatcaaaccaagttt 19788171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 27047589 - 27047635
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  27047589 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 27047635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 27911268 - 27911222
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  27911268 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 27911222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 38045486 - 38045532
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  38045486 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 38045532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 41802424 - 41802470
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  41802424 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 41802470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 46143480 - 46143434
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  46143480 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 46143434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 49379583 - 49379537
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  49379583 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 49379537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 498
Target Start/End: Original strand, 17986709 - 17986758
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 498  Q
    ||||||||||||||  ||||||||||| |||||||| ||||| |||||||    
T  17986709 ttgggattgttggataagtctaatgacataatcctaatcaaatcaagttt 17986758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Complemental strand, 39286570 - 39286525
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  39286570 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 39286525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 498
Target Start/End: Original strand, 41461877 - 41461926
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 498  Q
    ||||| ||||||||  ||||||||||| |||||||| |||||||||||||    
T  41461877 ttgggtttgttggataagtctaatgacataatcctaatcaaaccaagttt 41461926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 1e-45; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 66 - 225
Target Start/End: Complemental strand, 9798816 - 9798655
Alignment:
Q  66 attttaacacttggaagctgaaaagtgcacgatccgg-agaccgtgtgtttttgctgtcagcaagagctgttagaaaactctttggttt-tcctatttta 163  Q
    ||||||||||||||||| ||||||||||||| |   | |||||||| ||||||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  9798816 attttaacacttggaagttgaaaagtgcacggttgtgcagaccgtgcgtttttgctgtcagctagagctgttacaaaactctttggtttctcctatttta 9798717  T
Q  164 aagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaataggtcttcca 225  Q
    |||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||| ||||    
T  9798716 aagcttgtaaattcgagtttaatgccttgtctagaggttctaggctataaataggtcatcca 9798655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 67 - 216
Target Start/End: Original strand, 15201683 - 15201837
Alignment:
Q  67 ttttaacacttggaagctgaaaagtgcacgatcc-----ggagaccgtgtgtttttgctgtcagcaagagctgttagaaaactctttggttttcctattt 161  Q
    |||||||||||| ||||||||||||||||| ||      | | |||||| ||||||| ||||| | |||||||||| |||||||||||||||||||||||    
T  15201683 ttttaacacttgtaagctgaaaagtgcacggtctactgtgcataccgtgcgtttttgttgtcaactagagctgttacaaaactctttggttttcctattt 15201782  T
Q  162 taaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaata 216  Q
    ||||| |||||||||| ||||||||   ||||||||||||| |||||||||||||    
T  15201783 taaagtttgtaaatccaagtttaatatcttgtcttgaggttctaggctataaata 15201837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 433 - 517
Target Start/End: Complemental strand, 9798431 - 9798347
Alignment:
Q  433 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaa 517  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | ||||| ||||||||| ||||||||||    
T  9798431 agtagaccttctagtcttgggattgtcggaatagtctaatgacttaatcctattcagatcaagtctagatatctattttgtttaa 9798347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 9798515 - 9798472
Alignment:
Q  378 caatttacattcagtcatttacaattatacaatttatttctatg 421  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  9798515 caatttacattcagtcatttacaattaaacaatttatttctatg 9798472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 31469600 - 31469554
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  31469600 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 31469554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 495
Target Start/End: Original strand, 9317986 - 9318034
Alignment:
Q  447 tattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9317986 tattgggattgttggataagtctaatgacataatcctaatcaaaccaag 9318034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 21319566 - 21319621
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || |||||||| |||||  |||||||||||||||||||| ||||||||||    
T  21319566 cttcttgtcttgggattcttggacaagtctaatgacttaatcctaatcaaaccaag 21319621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 22285118 - 22285173
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22285118 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22285173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 1685806 - 1685852
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  1685806 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 1685852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 6570517 - 6570471
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6570517 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6570471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 14351590 - 14351544
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14351590 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14351544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 14878233 - 14878187
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14878233 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14878187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 17126987 - 17127033
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  17126987 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 17127033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 18264330 - 18264284
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18264330 ttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 18264284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 18273343 - 18273297
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18273343 ttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 18273297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 19997535 - 19997581
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19997535 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19997581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 20038417 - 20038371
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20038417 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20038371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 20044072 - 20044026
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20044072 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20044026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 21103574 - 21103528
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21103574 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21103528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 22370699 - 22370745
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22370699 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22370745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 494
Target Start/End: Original strand, 23503277 - 23503331
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  23503277 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaa 23503331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 25751645 - 25751599
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25751645 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25751599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 26854221 - 26854267
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  26854221 ttgggattgttggatgagtctaatgacctaatcctaatcaaaccaag 26854267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 29325452 - 29325498
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  29325452 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 29325498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 35996235 - 35996281
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  35996235 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 35996281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 43836216 - 43836170
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  43836216 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 43836170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Complemental strand, 21105616 - 21105571
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  21105616 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 21105571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 501
Target Start/End: Original strand, 27933242 - 27933291
Alignment:
Q  452 ggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 501  Q
    ||||||||| |||| |||| ||| | ||||||||||||||||||||||||    
T  27933242 ggattgttgaaataatctattgattgaatcctattcaaaccaagtttaga 27933291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 29003784 - 29003829
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  29003784 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 29003829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 562
Target Start/End: Complemental strand, 13539657 - 13539621
Alignment:
Q  526 atctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||||||||| |||||||| |||||||||||||||||    
T  13539657 atctcaaataccaaacgaaagaccgaaaggtgaagtt 13539621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 562
Target Start/End: Original strand, 13684817 - 13684853
Alignment:
Q  526 atctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||||||||| |||||||| |||||||||||||||||    
T  13684817 atctcaaataccaaacgaaagaccgaaaggtgaagtt 13684853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 18008279 - 18008335
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 496  Q
    ||||| || |||||||||||| |  ||||||||||| |||||||| |||||||||||    
T  18008279 cttcttgttttgggattgttgtataagtctaatgacctaatcctaatcaaaccaagt 18008335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 493
Target Start/End: Complemental strand, 21939422 - 21939378
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaacca 493  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||    
T  21939422 ttgggattgttggataagtctaatgacataatcctaatcaaacca 21939378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 113 - 249
Target Start/End: Complemental strand, 16999468 - 16999332
Alignment:
Q  113 tttttgctgtcagcaagagctgttagaaaactctttggttttcctattttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctata 212  Q
    ||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  16999468 tttttgctgtcagcaggagatgttacaaaactcttcggttttcctattttaaagcttgtaaatccgagtttaatgtcatgtcttgaggttttaggctata 16999369  T
Q  213 aataggtcttccatcatacctgtaatcatcttggaat 249  Q
    |||||||| || |||| || | |||||||||||||||    
T  16999368 aataggtcctcaatcagacttataatcatcttggaat 16999332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 517
Target Start/End: Complemental strand, 13833058 - 13832967
Alignment:
Q  433 agtagaccttctagtattgggattgttggaatagtctaat-------gacttaatcctattcaaaccaagtttagatatcttttttgtttaa 517  Q
    |||||||||| |||| ||| ||||||||||||||||||||       |||||||||||||||||||||||| || |||||| ||||||||||    
T  13833058 agtagaccttttagttttgtgattgttggaatagtctaatctctaatgacttaatcctattcaaaccaagtctaaatatctattttgtttaa 13832967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 520
Target Start/End: Complemental strand, 16999087 - 16999029
Alignment:
Q  462 aatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaatt 520  Q
    ||||||||||||||| ||||||||||||||||||| |||||| || |||| ||||||||    
T  16999087 aatagtctaatgactgaatcctattcaaaccaagtatagatacctattttatttaaatt 16999029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 13833142 - 13833099
Alignment:
Q  378 caatttacattcagtcatttacaattatacaatttatttctatg 421  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  13833142 caatttacattcagtcatttacaattatgaaatttatttctatg 13833099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 440 - 495
Target Start/End: Complemental strand, 20225177 - 20225122
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  |||||||||||||||||||| ||||||||||    
T  20225177 cttcttgtcttgggattgttggacaagtctaatgacttaatcctaatcaaaccaag 20225122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 449 - 498
Target Start/End: Complemental strand, 14071652 - 14071603
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 498  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  14071652 ttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 14071603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 11399023 - 11399078
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  11399023 cttcttgtgttgggattgttggataagtctaatgacataatcctaatcaaaccaag 11399078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Complemental strand, 11827356 - 11827301
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  11827356 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 11827301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 17041863 - 17041918
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  17041863 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 17041918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 22038987 - 22039042
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22038987 cttcttgtcttgggattgttggataagtctaatgacctaatcctaatcaaaccaag 22039042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 43496342 - 43496397
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  43496342 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 43496397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 494
Target Start/End: Original strand, 1993594 - 1993648
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  1993594 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 1993648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 2781396 - 2781442
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  2781396 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 2781442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 3279988 - 3280034
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3279988 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3280034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 3338685 - 3338639
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3338685 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3338639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 4768952 - 4768906
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4768952 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4768906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 4830203 - 4830249
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4830203 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4830249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 6710194 - 6710240
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6710194 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6710240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 6809815 - 6809861
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6809815 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6809861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 6815637 - 6815683
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6815637 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6815683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 9360419 - 9360373
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9360419 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9360373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 12246954 - 12247000
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  12246954 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 12247000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 13087671 - 13087717
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13087671 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 13087717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 13093902 - 13093856
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13093902 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 13093856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 13418539 - 13418585
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13418539 ttgggattgttggatgagtctaatgacctaatcctaatcaaaccaag 13418585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 15425106 - 15425060
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15425106 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15425060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 15430006 - 15430052
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15430006 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15430052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 15854357 - 15854403
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15854357 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15854403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 16385393 - 16385347
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16385393 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16385347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 17023404 - 17023450
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  17023404 ttgggattgttggataagtctaatgacctaatcctaatcaaaccaag 17023450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 22164658 - 22164612
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22164658 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22164612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 22169962 - 22169916
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22169962 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22169916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 24697007 - 24697053
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  24697007 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 24697053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 25055170 - 25055216
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25055170 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25055216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 25765771 - 25765725
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25765771 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25765725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 41473073 - 41473119
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  41473073 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 41473119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 43842002 - 43841956
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  43842002 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 43841956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 53354740 - 53354694
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  53354740 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 53354694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 4365997 - 4366042
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  4365997 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 4366042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 4383526 - 4383571
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  4383526 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 4383571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 13098461 - 13098506
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  13098461 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 13098506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 3e-31; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 140 - 249
Target Start/End: Complemental strand, 42687950 - 42687841
Alignment:
Q  140 aaactctttggttttcctattttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaataggtcttccatcatacctgtaatc 239  Q
    ||||||||||||||||| |||||||||||| |||||  ||||||||||  ||||||||||||||||||||||||| ||||| ||||||| || |||||||    
T  42687950 aaactctttggttttcccattttaaagcttataaatatgagtttaatgtcttgtcttgaggttttaggctataaacaggtcctccatcaaacttgtaatc 42687851  T
Q  240 atcttggaat 249  Q
    ||||||||||    
T  42687850 atcttggaat 42687841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 20684884 - 20684951
Alignment:
Q  177 cgagtttaatgcattgtcttgaggttttaggctataaataggtcttccatcatacctgtaatcatctt 244  Q
    |||||||||||  |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  20684884 cgagtttaatgtcttgtcttgaggtttcaggctataaataggtcctccatcatacttgtaatcatctt 20684951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 42687607 - 42687542
Alignment:
Q  455 ttgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaatt 520  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||||||||| |||| ||||||||    
T  42687607 ttgttggaatagtctaatgattaaatcctattcaaaccaagtctagatatctattttatttaaatt 42687542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 506
Target Start/End: Original strand, 20055252 - 20055325
Alignment:
Q  433 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatct 506  Q
    |||||||||| ||||  ||| ||||||| |||||||||||| |||||||||||||||||||||| || ||||||    
T  20055252 agtagaccttttagtcatggaattgttgaaatagtctaatggcttaatcctattcaaaccaagtataaatatct 20055325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 416
Target Start/End: Original strand, 20055180 - 20055215
Alignment:
Q  381 tttacattcagtcatttacaattatacaatttattt 416  Q
    ||||||||||||||||||||||||| ||||||||||    
T  20055180 tttacattcagtcatttacaattatgcaatttattt 20055215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 20738496 - 20738551
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20738496 cttcttgtcttgggattgttggatgagtctaatgacctaatcctaatcaaaccaag 20738551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 22948713 - 22948768
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || |||||||||| |||  ||||||||||| |||||||||||||||||||    
T  22948713 cttcttgtcttgggattgtcggataagtctaatgacataatcctattcaaaccaag 22948768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 7761053 - 7761007
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  7761053 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 7761007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 15732091 - 15732137
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15732091 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15732137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 15736310 - 15736356
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15736310 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15736356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 18613226 - 18613180
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18613226 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 18613180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 20595268 - 20595222
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20595268 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20595222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 20790161 - 20790115
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20790161 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20790115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 20795942 - 20795896
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20795942 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20795896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 20832410 - 20832364
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20832410 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20832364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 21734555 - 21734509
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21734555 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21734509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 21812198 - 21812152
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21812198 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21812152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 23435475 - 23435521
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23435475 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23435521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 23446842 - 23446888
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23446842 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23446888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 23618414 - 23618368
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23618414 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23618368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 23685000 - 23685046
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23685000 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23685046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 23849811 - 23849765
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23849811 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23849765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 23973148 - 23973102
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23973148 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23973102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 494
Target Start/End: Original strand, 24165395 - 24165449
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  24165395 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 24165449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 24935621 - 24935667
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  24935621 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 24935667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 24941313 - 24941359
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  24941313 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 24941359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 26848421 - 26848467
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  26848421 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 26848467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 494
Target Start/End: Complemental strand, 34223066 - 34223012
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  34223066 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 34223012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 34780459 - 34780505
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  34780459 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 34780505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 41765725 - 41765679
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  41765725 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 41765679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 429
Target Start/End: Complemental strand, 42687771 - 42687654
Alignment:
Q  317 tgcacttt-acattcttgaattttactttct--tgttctttatatttatgcaa-tttatcttcaa-caatttacattcagtcatttacaattatacaatt 411  Q
    |||||||| |||||||||   ||||||||||  |||| ||||||||| ||||| ||||| ||| | ||||||| |||||  ||||||||||||| |||||    
T  42687771 tgcacttttacattcttgctctttactttctcttgttatttatatttctgcaaatttatattccagcaatttatattcaaacatttacaattatgcaatt 42687672  T
Q  412 tatttctatgccttttta 429  Q
    || ||||||| |||||||    
T  42687671 tagttctatgtcttttta 42687654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 495
Target Start/End: Original strand, 12410677 - 12410722
Alignment:
Q  450 tgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    |||||||||||||  ||||||||||| |||||||| ||||||||||    
T  12410677 tgggattgttggatgagtctaatgacctaatcctaatcaaaccaag 12410722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 495
Target Start/End: Original strand, 23771076 - 23771120
Alignment:
Q  451 gggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23771076 gggattgttggataagtctaatgacataatcctaatcaaaccaag 23771120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 21511888 - 21511815
Alignment:
Q  433 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatct 506  Q
    |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  21511888 agtagaccatttagtcttgggattgttggaatagtctaatgacttaatcctattcaaaccaagtctaaatatct 21511815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 486
Target Start/End: Complemental strand, 21516367 - 21516314
Alignment:
Q  433 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctatt 486  Q
    |||||||| | |||| ||||||||||||||||||||||||||||||||||||||    
T  21516367 agtagaccatttagtgttgggattgttggaatagtctaatgacttaatcctatt 21516314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 496
Target Start/End: Original strand, 23482639 - 23482702
Alignment:
Q  433 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 496  Q
    ||||||| ||||| | |||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  23482639 agtagactttctactcttgggattgtgggaatagtctaatgactaaattctattcaaaccaagt 23482702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 427
Target Start/End: Original strand, 35406551 - 35406603
Alignment:
Q  375 caacaatttacattcagtcatttacaattatacaatttatttctatgcctttt 427  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  35406551 caacaatttatattcagtcatttacaattatgcaattcatttctatgtctttt 35406603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 449 - 498
Target Start/End: Original strand, 36684447 - 36684496
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 498  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  36684447 ttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 36684496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 21511717 - 21511673
Alignment:
Q  518 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||    
T  21511717 atttcatcatctcaaatatcaaacgaatgatcgaaagatgaagtt 21511673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 23340708 - 23340763
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23340708 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23340763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 24507446 - 24507501
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  24507446 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 24507501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Complemental strand, 28496641 - 28496586
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  28496641 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 28496586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 20172754 - 20172708
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20172754 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20172708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 20282197 - 20282243
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20282197 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20282243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 21468386 - 21468340
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21468386 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21468340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 494
Target Start/End: Complemental strand, 23698754 - 23698700
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  23698754 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 23698700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 494
Target Start/End: Complemental strand, 24366250 - 24366196
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  24366250 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 24366196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 25358287 - 25358333
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25358287 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25358333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 25370276 - 25370230
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25370276 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25370230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 498
Target Start/End: Original strand, 27745219 - 27745265
Alignment:
Q  452 ggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 498  Q
    |||||||||||  ||||||||||| |||||||| |||||||||||||    
T  27745219 ggattgttggataagtctaatgacataatcctaatcaaaccaagttt 27745265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Complemental strand, 23139937 - 23139892
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  23139937 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 23139892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Complemental strand, 23551727 - 23551682
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  23551727 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 23551682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 495
Target Start/End: Original strand, 32140122 - 32140167
Alignment:
Q  450 tgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    |||||||||||||  ||||||||||| |||||||| ||||||||||    
T  32140122 tgggattgttggagaagtctaatgacataatcctaatcaaaccaag 32140167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 6e-20; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 444 - 506
Target Start/End: Original strand, 21276770 - 21276832
Alignment:
Q  444 tagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatct 506  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  21276770 tagtcttgggattgttggaatagtctaatgacttaatcctattcaaaccaagtctaaatatct 21276832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 441 - 501
Target Start/End: Complemental strand, 15048201 - 15048141
Alignment:
Q  441 ttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 501  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  15048201 ttctagtcttgggattgttggaatagtctaatgactaaatcctattcaaaccaagtctaga 15048141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 15106223 - 15106283
Alignment:
Q  441 ttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 501  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  15106223 ttctagtcttgggattgttggaatagtctaatgactaaatcctattcaaaccaagtctaga 15106283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 17464992 - 17465049
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatct 506  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  17464992 ttgggattgttggaatagtctaatgacttaatcttattcaaaccaagtctaaatatct 17465049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 12347523 - 12347569
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  12347523 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 12347569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 522
Target Start/End: Complemental strand, 26493308 - 26493219
Alignment:
Q  433 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaatttg 522  Q
    |||||| |||||||| |||||||| |||||  ||||||| |||| |||||||||||| |||||| ||||  | | |||| ||||||||||    
T  26493308 agtagatcttctagtcttgggattattggatgagtctaaggactaaatcctattcaagccaagtctagaactttgttttatttaaatttg 26493219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 12634345 - 12634301
Alignment:
Q  518 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||| |||||||||||||||||| |||||||||||| ||||||||    
T  12634345 atttcatcatctcaaatatcaaatgaatgaccgaaatgtgaagtt 12634301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 21276696 - 21276772
Alignment:
Q  131 gctgttagaaaactctttggttttcc-tattttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttag 206  Q
    ||||||| |||||||||||||||||| || ||||||| |||||| | || ||||||||  |||||||||| ||||||    
T  21276696 gctgttacaaaactctttggttttccttaatttaaagtttgtaatttcgtgtttaatgtcttgtcttgagattttag 21276772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 7197364 - 7197419
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  | |||||||||||||||||| ||||||||||    
T  7197364 cttcttgtcttgggattgttggataattctaatgacttaatcctaatcaaaccaag 7197419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 416
Target Start/End: Original strand, 17464909 - 17464944
Alignment:
Q  381 tttacattcagtcatttacaattatacaatttattt 416  Q
    ||||||||||||||||||||||||| ||||||||||    
T  17464909 tttacattcagtcatttacaattatgcaatttattt 17464944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 501
Target Start/End: Complemental strand, 36709646 - 36709600
Alignment:
Q  454 attgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 501  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  36709646 attgttggaat-gtctaatgactaaatcctattcaaaccaagtctaga 36709600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 3371768 - 3371814
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3371768 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3371814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 3419206 - 3419252
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3419206 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3419252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 6518521 - 6518567
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6518521 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6518567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 494
Target Start/End: Original strand, 9857350 - 9857404
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  9857350 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaa 9857404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 9945090 - 9945136
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9945090 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9945136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 10631517 - 10631563
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  10631517 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 10631563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 494
Target Start/End: Complemental strand, 12808128 - 12808074
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  12808128 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 12808074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 495
Target Start/End: Complemental strand, 13883401 - 13883359
Alignment:
Q  453 gattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||  ||||||||||| |||||||||||||||||||    
T  13883401 gattgttggatgagtctaatgacctaatcctattcaaaccaag 13883359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 14653424 - 14653378
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14653424 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14653378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 14690773 - 14690727
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14690773 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14690727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 16683510 - 16683556
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16683510 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16683556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 18078829 - 18078875
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18078829 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 18078875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 5717537 - 5717582
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  5717537 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 5717582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Complemental strand, 18080893 - 18080848
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  18080893 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 18080848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 493
Target Start/End: Original strand, 3392093 - 3392137
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaacca 493  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||    
T  3392093 ttgggattgttggataagtctaatgacataatcctaatcaaacca 3392137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 439 - 495
Target Start/End: Original strand, 10731280 - 10731336
Alignment:
Q  439 ccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    |||||| || ||||||||||||||  ||||||||||| |||||||| ||||| ||||    
T  10731280 ccttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaatcaag 10731336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 439 - 495
Target Start/End: Original strand, 10945049 - 10945105
Alignment:
Q  439 ccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    |||||| || ||||||||||||||  ||||||||||| |||||||| ||||| ||||    
T  10945049 ccttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaatcaag 10945105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 501
Target Start/End: Complemental strand, 17295575 - 17295524
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 501  Q
    |||||||||||||||  ||||||||||| ||||||||||||| ||||| ||||    
T  17295575 ttgggattgttggaag-gtctaatgactaaatcctattcaaatcaagtctaga 17295524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 493
Target Start/End: Complemental strand, 36654294 - 36654250
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaacca 493  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||    
T  36654294 ttgggattgttggataagtctaatgacataatcctaatcaaacca 36654250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 55268081 - 55268125
Alignment:
Q  518 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||| |||||||||||||||||||||| || |||||| |||||||    
T  55268081 atttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtt 55268125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 440 - 495
Target Start/End: Complemental strand, 23523891 - 23523836
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  |||||||||||||||||||| ||||||||||    
T  23523891 cttcttgttttgggattgttggatgagtctaatgacttaatcctaatcaaaccaag 23523836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 25964058 - 25964113
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25964058 cttcttgtattgggattgttggataagtctaatgacataatcctaatcaaaccaag 25964113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 25968705 - 25968760
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25968705 cttcttgtattgggattgttggataagtctaatgacataatcctaatcaaaccaag 25968760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 13168526 - 13168572
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  13168526 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 13168572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 5399371 - 5399426
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  5399371 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 5399426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Complemental strand, 18396443 - 18396388
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  |||||||||| ||||||||| ||||||||||    
T  18396443 cttcttgtcttgggattgttggacaagtctaatgatttaatcctaatcaaaccaag 18396388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Complemental strand, 20218419 - 20218364
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20218419 cttcttgtcttgggattgttggatgagtctaatgacataatcctaatcaaaccaag 20218364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Complemental strand, 22112444 - 22112389
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22112444 cttcttgtcttgggattgttggatgagtctaatgacataatcctaatcaaaccaag 22112389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 4188292 - 4188338
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4188292 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4188338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 8603651 - 8603697
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8603651 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8603697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 15700333 - 15700379
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15700333 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15700379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 17743654 - 17743700
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  17743654 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 17743700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 19075283 - 19075237
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19075283 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19075237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 22005916 - 22005962
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22005916 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22005962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 25786301 - 25786255
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25786301 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25786255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 494
Target Start/End: Original strand, 26138804 - 26138858
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  26138804 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 26138858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 498
Target Start/End: Original strand, 30245344 - 30245402
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 498  Q
    ||||| || ||||||||||||||  ||||||||||| ||||| || |||||||||||||    
T  30245344 cttcttgtcttgggattgttggataagtctaatgacataatcatagtcaaaccaagttt 30245402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 4741136 - 4741181
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  4741136 ttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 4741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Complemental strand, 20993706 - 20993661
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 494  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  20993706 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 20993661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 562
Target Start/End: Complemental strand, 31817684 - 31817651
Alignment:
Q  529 tcaaatatcaaacgaatgaccgaaaggtgaagtt 562  Q
    |||||||||||||||| |||||||||||||||||    
T  31817684 tcaaatatcaaacgaaggaccgaaaggtgaagtt 31817651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 497
Target Start/End: Original strand, 28973997 - 28974041
Alignment:
Q  453 gattgttggaatagtctaatgacttaatcctattcaaaccaagtt 497  Q
    ||||||||||||| |||||||||| ||||||| |||| |||||||    
T  28973997 gattgttggaataatctaatgactcaatcctaatcaacccaagtt 28974041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 1802 - 1848
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  1802 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 1848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 8772 - 8716
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 496  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||||    
T  8772 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaagt 8716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 77972 - 78027
Alignment:
Q  440 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  77972 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 78027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 1618 - 1572
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  1618 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 1572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1058 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1058
Description:

Target: scaffold1058; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 2995 - 2949
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  2995 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 2949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 1269 - 1223
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  1269 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 1223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 3153 - 3107
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3153 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0624 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0624
Description:

Target: scaffold0624; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 4830 - 4876
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4830 ttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 4876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 9658 - 9704
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9658 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 821 - 867
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  821 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 8887 - 8933
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8887 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 16413 - 16459
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16413 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 78 - 32
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  78 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 32  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 38219 - 38265
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  38219 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 38265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 34983 - 34937
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  34983 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 34937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 19585 - 19631
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19585 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 32232 - 32186
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  32232 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 32186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 37132 - 37178
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  37132 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 37178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 14517 - 14471
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14517 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 49965 - 49919
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  49965 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 49919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 117904 - 117950
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  117904 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 117950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 124148 - 124194
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  124148 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 124194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 33320 - 33274
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  33320 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 33274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 369449 - 369403
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 495  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  369449 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 369403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 498
Target Start/End: Complemental strand, 8790 - 8741
Alignment:
Q  449 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 498  Q
    ||||||||||| ||  ||||||||||| |||||||| |||||||||||||    
T  8790 ttgggattgtttgataagtctaatgacataatcctaatcaaaccaagttt 8741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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