View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10498_high_10 (Length: 273)
Name: NF10498_high_10
Description: NF10498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10498_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 41069345 - 41069082
Alignment:
| Q |
1 |
tattttcaacgtcaactttcattttgtcgactcattaatcaaatttataggacactcctaaacaatacatgtattaaaataacactcatatgaatctatc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
41069345 |
tattttcaacgtcaactttcattttgtcgactcattaatcaaatttatag-acactcctaaacaatacatgtattaaaataacactcat--gaatctatc |
41069249 |
T |
|
| Q |
101 |
tattaactctt---aaccttagtttgatttttgtagggtaggggaataattacgggtatagggagtaaaatcttactaatagctctttccaacatgaaac |
197 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41069248 |
tattaactctttacaaccttagtttgatttttgtagggtaggggaataattacgggtatagggagtaaaatcttactaatagctctttccaacatgaaac |
41069149 |
T |
|
| Q |
198 |
ttaataactagtggcacactgacactactgtacttgtttaatgccttggttatgttctacctatgctt |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |
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| T |
41069148 |
-taataactagtggcacactgacactactgtacttgtttactgccttggttatgttctacctctgctt |
41069082 |
T |
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