View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10498_high_9 (Length: 275)
Name: NF10498_high_9
Description: NF10498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10498_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 37941816 - 37941555
Alignment:
| Q |
4 |
caaaaacaaggttggatctctttacttctgcttcaacaataacattccctccttataatcttcttcgtcccgttgcacacaatcttcttcctccatcctc |
103 |
Q |
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| T |
37941816 |
caaaaacaaggttggatctctttacttctgcttcaacaataacattccctccttataatcttcttcgtcccgttgcacacaatcttcttcctccatcctc |
37941717 |
T |
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| Q |
104 |
ttccattcacaaccaattgctatcttcttcatttgatcattttaaacagcctctcaataatatatacaacatgcacagccaaaaccaagctttcaccttt |
203 |
Q |
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|||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37941716 |
ttccattcacaaccaatttctatcttcttcagttgatcattttaaacagcctctcaataatatatacaacatgcacagccaaaaccaagctttcaccttt |
37941617 |
T |
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| Q |
204 |
cgaacaattcatgatcaaacaccacaaaagccactgcaaaagtaccctcttggttattcttc |
265 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37941616 |
cgaacaattcatgatcaaacaccacaaaagccactgcaaaagtaccctcttggttattcttc |
37941555 |
T |
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