View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10498_low_11 (Length: 372)
Name: NF10498_low_11
Description: NF10498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10498_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 357
Target Start/End: Original strand, 9570328 - 9570695
Alignment:
| Q |
1 |
tgacaatgcaaaagttctctgatgtgtacgattttatttttgctgaatagggtttaagaaactcaagatagaattaaccatcatttctaattatagccgt |
100 |
Q |
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| T |
9570328 |
tgacaatgcaaatgttctctgatgtgtacgattttatttttgctgaatagggttttagaaactcaagatagaattaaccatcatttctaattatagccgt |
9570427 |
T |
|
| Q |
101 |
agatatactttaaatgatataattttacgagaatgttcgataaaaa------------tatatatatcaattatataatttactaatctgtgtgcaaaaa |
188 |
Q |
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| T |
9570428 |
agattttccatac-tgatataattttacgagaatgttcgataaaaaaaaaaaaatatatatatatatcaattatataatttactaatctgtgtgcaaaaa |
9570526 |
T |
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| Q |
189 |
ccttaaactacggagtatatggaatggaaggaatatcatcgaatacgccttgacacaattaaattgtcacattgatggccggtcactctcaaggacccca |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9570527 |
ccttaaactacggagtatatggaatggaaggaatatcatcgaatacgccttgacacaattaaattgtcacattgatggccggtcactctcaaggacccca |
9570626 |
T |
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| Q |
289 |
gttcatttagataaatatgaagatagcatatataagatagcctctccattgccaccacggcaccaccct |
357 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9570627 |
gttcatttagataaatatgaagatagcatatataagatagcctctccattgccaccacggcaccaccct |
9570695 |
T |
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