View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10498_low_16 (Length: 352)
Name: NF10498_low_16
Description: NF10498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10498_low_16 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 310; Significance: 1e-174; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 5 - 341
Target Start/End: Original strand, 8411019 - 8411353
Alignment:
| Q |
5 |
tgagttactctctttaatctttggctctctcactctttgacatttcttgagctttgttattatagtaggtatgatgggcatgcaaagtgtccaaaatctc |
104 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8411019 |
tgagttactccctttaatctttggctct--cactctttgacatttcttgagctttgttattatagtaggtatgacgggcatgcaaagtgtccaaaatctc |
8411116 |
T |
 |
| Q |
105 |
ttcacttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaatgtcatgtgctgaa |
204 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8411117 |
ttcacttacctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaatgtcatgtgctgaa |
8411216 |
T |
 |
| Q |
205 |
gactttggtgctaaggtattgttctttgattgaagatgcacaagtcctctgcatatctaatcagacattatccagtttgactataagtaatgtattagct |
304 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8411217 |
gactttggtgctcaggtattgttctttgattgaagatgcacaagtcctctgcatatctaatcagacattatccagtttgactataagtaatgtattagct |
8411316 |
T |
 |
| Q |
305 |
gaccaattttcgctttctactccatatcttagttctt |
341 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8411317 |
gaccaattttcgctttctactccatatcttagttctt |
8411353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 5 - 341
Target Start/End: Complemental strand, 8041579 - 8041245
Alignment:
| Q |
5 |
tgagttactctctttaatctttggctctctcactctttgacatttcttgagctttgttattatagtaggtatgatgggcatgcaaagtgtccaaaatctc |
104 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |
|
|
| T |
8041579 |
tgagttacttcctttaatctttggctctc--actctttgacatttcttgagctttgttattatagttggtatgacgggtatgcaaagtgtccaaaatctc |
8041482 |
T |
 |
| Q |
105 |
ttcacttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaatgtcatgtgctgaa |
204 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| |
|
|
| T |
8041481 |
ttcacttacctgcattaagaaccttgcatcttaattttttcagatttgttgcaactcacaatcattgtgctgacccttttccaaactgtcacgtgttgaa |
8041382 |
T |
 |
| Q |
205 |
gactttggtgctaaggta-ttgttctttgattgaagatgcacaagtcctctgcatatctaatcagacattatccagtttgactataagtaatgtattagc |
303 |
Q |
| |
|
| |||||| || | || |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||| |
|
|
| T |
8041381 |
tattttggttct-cgatagctgttctttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttgactataacctatgtatcagc |
8041283 |
T |
 |
| Q |
304 |
tgaccaattttcgctttctactccatatcttagttctt |
341 |
Q |
| |
|
|| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
8041282 |
tgtccaattttcgctttctactccaaatcttagttctt |
8041245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 5 - 341
Target Start/End: Original strand, 8416621 - 8416955
Alignment:
| Q |
5 |
tgagttactctctttaatctttggctctctcactctttgacatttcttgagctttgttattatagtaggtatgatgggcatgcaaagtgtccaaaatctc |
104 |
Q |
| |
|
|||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| || |||| |||||||||||||||| |
|
|
| T |
8416621 |
tgagatactcccgttaatctttggctct--cactctttgacatttcttgagctttcttattatagtaggtatgactggtatgcgaagtgtccaaaatctc |
8416718 |
T |
 |
| Q |
105 |
ttcacttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaatgtcatgtgctgaa |
204 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| || ||| |||| |||||||||||||| |
|
|
| T |
8416719 |
ttcacttacctgcattaagaaccttgcatcttaaattttttaactttgttgcaactcacgatcattgtgctgagcccttttcaaactgtcatgtgctgaa |
8416818 |
T |
 |
| Q |
205 |
gactttggtgctaaggtattgttctttgattgaagatgcacaagtcctctgcatatctaatcagacattatccagtttgactataagtaatgtattagct |
304 |
Q |
| |
|
|||||||| | || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| |||| |
|
|
| T |
8416819 |
tactttggttatcagtggttgttctttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttgactatatcctacgtatcagct |
8416918 |
T |
 |
| Q |
305 |
gaccaattttcgctttctactccatatcttagttctt |
341 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| |
|
|
| T |
8416919 |
gaccaattttcgctttctactccaaatcttagttctt |
8416955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 4 - 338
Target Start/End: Complemental strand, 8359321 - 8358998
Alignment:
| Q |
4 |
atgagttactctctttaatctttggctctctcactctttgacatttcttgagctttgttattatagtaggtatgatgggcatgcaaagtgtccaaaatct |
103 |
Q |
| |
|
||||||| ||| |||||||||||||||||| |||||||||||||||||||||||| || ||| || | ||| |||| ||||||||||||||| |
|
|
| T |
8359321 |
atgagttcctccctttaatctttggctctc--actctttgacatttcttgagctttctt-------tagtta--acgggtatgcgaagtgtccaaaatct |
8359233 |
T |
 |
| Q |
104 |
cttcacttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaatgtcatgtgctga |
203 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||| ||| |||| ||||||||| ||| |
|
|
| T |
8359232 |
cttcacctgcctgcattaagaaccttgcatcttaaatgcttcaactttgttacaactcactatcactgtgctgaccccttttcaaactgtcatgtgttga |
8359133 |
T |
 |
| Q |
204 |
agactttggtgctaaggtattgttctttgattgaagatgcacaagtcctctgcatatctaatcagacattatccagtttgactataagtaatgtattagc |
303 |
Q |
| |
|
| |||||| ||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| | |||||||| |
|
|
| T |
8359132 |
acactttgcagctcaagtattgttctttgattgatgatgcacaaatcctctgcatatctaatcagacattatccaatttgactatatcctacgtattagc |
8359033 |
T |
 |
| Q |
304 |
tgaccaattttcgctttctactccatatcttagtt |
338 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |
|
|
| T |
8359032 |
tgaccaattttcgctttctactccaaatcttagtt |
8358998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 5 - 341
Target Start/End: Complemental strand, 8036162 - 8035831
Alignment:
| Q |
5 |
tgagttactctctttaatctttggctctctcactctttgacatttcttgagctttgttattatagtaggtatgatgggcatgcaaagtgtccaaaatctc |
104 |
Q |
| |
|
|||||||||| |||||||||||||||||| | ||||||||||||||||| ||||||||| |||||| || | | || |||||||||||||||||| |
|
|
| T |
8036162 |
tgagttactccctttaatctttggctctc--attctttgacatttcttgatctttgttat---agtaggaataacacggatacaaagtgtccaaaatctc |
8036068 |
T |
 |
| Q |
105 |
ttcacttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaatgtcatgtgctgaa |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||||| |||| |
|
|
| T |
8036067 |
ttcacttgcctgcattaagaaccttgcatcttaaatatttcaagtttgttgcaactcacaatcattgtgctgacccctttcaaaactgtcatgtgttgaa |
8035968 |
T |
 |
| Q |
205 |
gactttggtgctaaggta-ttgttctttgattgaagatgcacaagtcctctgcatatctaatcagacattatccagtttgactataagtaatgtattagc |
303 |
Q |
| |
|
| |||||| || | || |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||| |||| |||| |
|
|
| T |
8035967 |
tattttggttct-cgatagctgttctttgattgaggatgcacaagtcctctgcatatctaatcagacactatccaatttgactatatcatctgtactagc |
8035869 |
T |
 |
| Q |
304 |
tgaccaattttcgctttctactccatatcttagttctt |
341 |
Q |
| |
|
||| |||| |||||||||||||||| |||||||||| |
|
|
| T |
8035868 |
tgaacaatattcgctttctactccaaggcttagttctt |
8035831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 341
Target Start/End: Complemental strand, 9138756 - 9138429
Alignment:
| Q |
9 |
ttactctctttaatctttggctctctcactctttgacatttcttgagctttgttattatagtaggtatgatgggcatgcaaagtgtccaaaatctcttca |
108 |
Q |
| |
|
|||||| ||||| |||||||||||| | ||||||||||||||||| |||| ||||| ||| | | | ||| ||||||||||||||||||||||||| |
|
|
| T |
9138756 |
ttactccctttactctttggctctcgc--tctttgacatttcttgacctttcttatt---gtatgaaaaacgggtatgcaaagtgtccaaaatctcttca |
9138662 |
T |
 |
| Q |
109 |
cttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaatgtcatgtgctgaagact |
208 |
Q |
| |
|
| | || ||||||||||||||||||||| ||| ||| ||||||||||||||||| |||| ||||||||||| |||||||| ||||| ||| |||| ||| |
|
|
| T |
9138661 |
cataccagcattaagaaccttgcatcttcaatggttccactttgttgcaactcacgatcactgtgctgacccctttccaaactgtcacgtgttgaatact |
9138562 |
T |
 |
| Q |
209 |
ttggtgctaaggtattgttctttgattgaagatgcacaagtcctctgcatatctaatcagacattatccagtttgactataagtaatgtattagctgacc |
308 |
Q |
| |
|
||||| || | ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||| || |||| |||||||| |
|
|
| T |
9138561 |
ttggttctcattgcttgttctttgattgaggatgcacaagtcctctgcatatctaatcagacactatccaatttgactataagaaaagtatcagctgacc |
9138462 |
T |
 |
| Q |
309 |
aattttcgctttctactccatatcttagttctt |
341 |
Q |
| |
|
||| ||| |||||| ||||| |||||||||||| |
|
|
| T |
9138461 |
aatattcactttctgctccaaatcttagttctt |
9138429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 98 - 341
Target Start/End: Original strand, 8404062 - 8404308
Alignment:
| Q |
98 |
aaatctcttcacttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaatgtcatg |
197 |
Q |
| |
|
|||||| |||| ||||||| ||||||||| || |||||| ||| |||||||||||||||||||| |||| | || ||| || ||| |||| ||||| |
|
|
| T |
8404062 |
aaatcttttcatttgcctgtattaagaactttacatcttgaatacgtcaactttgttgcaactcacgatcactatgttgatcccttttcaaaccttcatg |
8404161 |
T |
 |
| Q |
198 |
tgctgaagactttggtgctaaggtattgttctttgattgaagatgcacaagtcctctgcatatctaatcagacattatccagtttgactataagtaatgt |
297 |
Q |
| |
|
| |||| ||||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| | | | |
|
|
| T |
8404162 |
cgttgaatactttggtgctcaggttttgtgatttgattgaggatgcacaagtcctctgcatatctaatcagacactgtccagtttgactatatttcacat |
8404261 |
T |
 |
| Q |
298 |
---attagctgaccaattttcgctttctactccatatcttagttctt |
341 |
Q |
| |
|
|| |||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
8404262 |
atcatcagctgatgaattttcgctttctactccaaatcttagttctt |
8404308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 6 - 168
Target Start/End: Complemental strand, 8354771 - 8354614
Alignment:
| Q |
6 |
gagttactctctttaatctttggctctctcactctttgacatttcttgagctttgttattatagtaggtatgatgggcatgcaaagtgtccaaaatctct |
105 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||| || | | | ||||||||||||||||||| |
|
|
| T |
8354771 |
gagttactccctttaatctttggctctc--actctttgacatttcttgatctttgttat---agtaggaataacacggagacaaagtgtccaaaatctct |
8354677 |
T |
 |
| Q |
106 |
tcacttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatca |
168 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||| |||| |
|
|
| T |
8354676 |
tcacttgcctgcagtaagaaccttgcatctcaaatgtgtcaactttgttgcaactcaccatca |
8354614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 91 - 335
Target Start/End: Complemental strand, 43144555 - 43144311
Alignment:
| Q |
91 |
gtgtccaaaatctcttcacttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaa |
190 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||| ||| |||| |||| | |||||||||||||||| ||| |||| | ||||||||||||| |||| |
|
|
| T |
43144555 |
gtgtccaaaatctctacgcttgcctgcattaagaactttgtatctcaaatatgtcaactttgttgcaacacaccatcactatgctgaccctttttcaaac |
43144456 |
T |
 |
| Q |
191 |
tgtcatgtgctgaagactttggtgctaaggtattgttctttgattgaagatgcacaagtcctctgcatatctaatcagacattatccagtttgactataa |
290 |
Q |
| |
|
||||||| | | || | |||||| || ||| |||||||||||||| | |||||| ||||||| |||||||||||| | || | |||||||| |||||| |
|
|
| T |
43144455 |
tgtcatgagttaaataatttggtacttagggattgttctttgattcaggatgcaaaagtcctttgcatatctaataatgcactttccagtttaactatat |
43144356 |
T |
 |
| Q |
291 |
gtaatgtattagctgaccaattttcgctttctactccatatctta |
335 |
Q |
| |
|
| ||| |||| | |||||||| |||||||||||| |||||| |
|
|
| T |
43144355 |
cttctgttgcagctcagcaattttcactttctactccaaatctta |
43144311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 91 - 263
Target Start/End: Complemental strand, 8356196 - 8356024
Alignment:
| Q |
91 |
gtgtccaaaatctcttcacttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaa |
190 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||| |||||||| ||| | |||||||||||||||||||| |||| | ||| ||||||||| |||| |
|
|
| T |
8356196 |
gtgtccaaaatctcttcaatttcctgcattaagaactttgcatctcgaatgtgtcaactttgttgcaactcaccatcactatgccgaccctttttcaaac |
8356097 |
T |
 |
| Q |
191 |
tgtcatgtgctgaagactttggtgctaaggtattgttctttgattgaagatgcacaagtcctctgcatatcta |
263 |
Q |
| |
|
||||||| | | || |||||||| || ||||| |||||||| || ||||||||||| |||||||||| |
|
|
| T |
8356096 |
tgtcatgagttaaatactttggtacttgatgattgtaaattgattgaggacgcacaagtcctttgcatatcta |
8356024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 108 - 265
Target Start/End: Complemental strand, 9577072 - 9576915
Alignment:
| Q |
108 |
acttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaatgtcatgtgctgaagac |
207 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||| |||||| ||||||| ||| ||| |||||||| || ||| | || |||| ||| |||| || |
|
|
| T |
9577072 |
acttgcctgcattaagaaccttgcatcttgaatacttctactttgctgcaactaacagtcactgtgctgatcccttttcgaactgtctcgtgttgaatac |
9576973 |
T |
 |
| Q |
208 |
tttggtgctaaggtattgttctttgattgaagatgcacaagtcctctgcatatctaat |
265 |
Q |
| |
|
|||||||| | ||||||| ||||||| | || ||||||||||||||||||||||| |
|
|
| T |
9576972 |
attggtgctcggttattgttgtttgattaaggaaacacaagtcctctgcatatctaat |
9576915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 10 - 341
Target Start/End: Original strand, 33084188 - 33084505
Alignment:
| Q |
10 |
tactctctttaatctttggctctctcactctttgacatttcttgagctttgttattatagtaggtatgatgggcatgcaaagtgtccaaaatctcttcac |
109 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||||||||||||||||| |||| |||| || |||||||||||||||||||||||||| |
|
|
| T |
33084188 |
tactccctttaatctttggctctc--actctttgacatttcttgagctttcttat-------ggtagga-----atgcaaagtgtccaaaatctcttcac |
33084273 |
T |
 |
| Q |
110 |
ttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaatgtcatgtgctgaagactt |
209 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| ||| |||| |||| |
|
|
| T |
33084274 |
ttgcctgcattaagaaccttgcatcttcaatttttcaacttctttgcaactcacaatcattgtgctgacccctttccaaactgtcacgtgttgaatactt |
33084373 |
T |
 |
| Q |
210 |
tggtgctaaggtattgttctttgattgaagatgcacaagtcctctgcatatctaatcagacattatccagtttgactataagtaatgtattagctgacca |
309 |
Q |
| |
|
|||| || || ||||||||||||||| |||||||||||||||| ||| |||||||||||| |||||| |||||||||| || | ||| | ||||||| |
|
|
| T |
33084374 |
tggttctcagtggttgttctttgattgaggatgcacaagtcctctacatgtctaatcagacactatccaatttgactatatgttacatatcaactgacca |
33084473 |
T |
 |
| Q |
310 |
attttcgctttctactccatatcttagttctt |
341 |
Q |
| |
|
|| ||| |||||||||||| |||||||||||| |
|
|
| T |
33084474 |
atattcactttctactccaaatcttagttctt |
33084505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 24845330 - 24845441
Alignment:
| Q |
87 |
caaagtgtccaaaatctcttcacttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttcc |
186 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||| |||| | |||||||||| ||||||||| |||| | |||||| |||||| | |
|
|
| T |
24845330 |
caaagtgtccaaaatctcttcacttgcctgcagtaagaaccttgcatctcaaatgtgtcaactttgtagcaactcaccatcactatgctga-cctttttc |
24845428 |
T |
 |
| Q |
187 |
aaaatgtcatgtg |
199 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
24845429 |
aaactgtcatgtg |
24845441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 24844594 - 24844651
Alignment:
| Q |
5 |
tgagttactctctttaatctttggctctctcactctttgacatttcttgagctttgttat |
64 |
Q |
| |
|
|||||||||||||| ||||||||| |||||| ||||||||||||||||| |||| |||| |
|
|
| T |
24844594 |
tgagttactctcttcaatctttgg--ctctcattctttgacatttcttgatctttcttat |
24844651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 94 - 289
Target Start/End: Original strand, 5476606 - 5476801
Alignment:
| Q |
94 |
tccaaaatctcttcacttgcctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctgacccttttccaaaatgt |
193 |
Q |
| |
|
|||||||||||| || ||||||||||||||||| || |||||| ||| |||||||||||||||||| | |||| | || ||| || ||| |||| | |
|
|
| T |
5476606 |
tccaaaatctctacatttgcctgcattaagaactttacatcttgaatacgtcaactttgttgcaactcgcgatcactatgttgatcccttttcaaacctt |
5476705 |
T |
 |
| Q |
194 |
catgtgctgaagactttggtgctaaggtattgttctttgattgaagatgcacaagtcctctgcatatctaatcagacattatccagtttgactata |
289 |
Q |
| |
|
|||| | |||| ||||||||||| |||| ||||| ||||||||| ||||||| ||||||||||||||||||||||||| | |||| |||||||||| |
|
|
| T |
5476706 |
catgcgttgaatactttggtgctcaggtgttgttatttgattgaggatgcactagtcctctgcatatctaatcagacactgtccaatttgactata |
5476801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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