View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10498_low_37 (Length: 275)
Name: NF10498_low_37
Description: NF10498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10498_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 29 - 257
Target Start/End: Complemental strand, 38885559 - 38885331
Alignment:
| Q |
29 |
agaagcagagaattgtagaacttaggtccaatgtcaacctggagtgtagataaagtcaaaaatattcataccagaaaactataaggagaaattaaattgn |
128 |
Q |
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| T |
38885559 |
agaaggagagaattgtagaacttaggtccaatgtcaacctggagtgtagataaagtcaaaaatattcataccagaaaactataaggagaaattaaattga |
38885460 |
T |
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| Q |
129 |
nnnnnncatttttcaaccaaccataacaatttcattccttcacgtggacttctcatgcatagcaagaaacctctctctcaatgtaacattgacaagctta |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38885459 |
aaaaaacatttttcaaccaaccataacaatttcattccttcacgtggacttctcatgcatagcaagaaacctctctctcaatgtaacattgacaagctta |
38885360 |
T |
|
| Q |
229 |
gccctcaacatcattgatagttgcattgc |
257 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
38885359 |
gccctcaacatcattgatagttgcattgc |
38885331 |
T |
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