View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10498_low_41 (Length: 264)
Name: NF10498_low_41
Description: NF10498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10498_low_41 |
 | |
|
| [»] chr7 (19 HSPs) |
| |
|
| [»] scaffold0182 (1 HSPs) |
| | |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 6 - 264
Target Start/End: Original strand, 21664105 - 21664363
Alignment:
| Q |
6 |
caaagggtgccacataatctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatc |
105 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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|
| T |
21664105 |
caaagggtgccacacaatctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggcaatacagatc |
21664204 |
T |
|
| Q |
106 |
tgaagttaggagggaagtacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacat |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
21664205 |
tgaagttaggagggaagtacaagcttatgtgggcagcaaaatacattgaaaatacaagactcaatccacgggatctacacaaaaagatttttgataacat |
21664304 |
T |
|
| Q |
206 |
cgatgaactgaagggtcattttgacgatgatgtaattttaactttaaccggcaagtctc |
264 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21664305 |
cgatgaactgaagggtcattttgacgatgatgtaattttaactttaaccggcaagtctc |
21664363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 22 - 264
Target Start/End: Original strand, 21788252 - 21788491
Alignment:
| Q |
22 |
atctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaa |
121 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||| |||||||| |||| |||||||||||||||||| || ||| || |||||||||||| ||| |
|
|
| T |
21788252 |
atctcagaaatagaaaaaactttgagaagcattactcgcccaagttgttgtcggtaggtcctatccatcatgacaacacaaatttgaagttaggagagaa |
21788351 |
T |
|
| Q |
122 |
gtacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggt |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| || ||| | |||| |||||| ||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
21788352 |
gtacaagcttatgtgggcagcaaaatacatcgaaaacactggacacattccagaggatctgcacaaaaagattgcagataacattgatgaactgaagggt |
21788451 |
T |
|
| Q |
222 |
cattttgacgatgatgtaattttaactttaaccggcaagtctc |
264 |
Q |
| |
|
||||||| ||| |||| ||||||||||||| |||||||||| |
|
|
| T |
21788452 |
cattttggcgacgatg---ttttaactttaactggcaagtctc |
21788491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 22 - 238
Target Start/End: Original strand, 21704666 - 21704882
Alignment:
| Q |
22 |
atctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaa |
121 |
Q |
| |
|
||||||||| ||||||||||||||| || |||||||||||||||| |||| ||||||||||||||||||| ||| || |||||||||||||| ||| |
|
|
| T |
21704666 |
atctcagaagtagaaaaaactttgagcagcattactcacccaagttagtgtcgataggtcctatccatcatgacaatccaactctgaagttaggagagaa |
21704765 |
T |
|
| Q |
122 |
gtacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggt |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| || |||||| |||| ||| |||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
21704766 |
gtacaagcttatgtgggcagcaaaatacatagaaaacaccggacttattccagaggaactacacaaaaagattgcagataacattgatgaactgaagggt |
21704865 |
T |
|
| Q |
222 |
cattttgacgatgatgt |
238 |
Q |
| |
|
| |||| ||||||||| |
|
|
| T |
21704866 |
cgttttagcgatgatgt |
21704882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 22 - 264
Target Start/End: Original strand, 21785429 - 21785668
Alignment:
| Q |
22 |
atctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaa |
121 |
Q |
| |
|
|||| ||||| || ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||| || |||||||| ||||| ||| |
|
|
| T |
21785429 |
atctaagaaataggaaaaactttgagaagcattactcacccaagttagtgtcaataggtcctatccatcatgacaatccaaatctgaagacaggagagaa |
21785528 |
T |
|
| Q |
122 |
gtacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggt |
221 |
Q |
| |
|
|||||||||||||||||| ||||||||| | || |||| | | | |||||||| ||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
21785529 |
gtacaagcttatgtgggccgcaaaatacctcgagaatataggccgcaatccacgcgatctacacaaaaagattgccgataacattaatgaactgaagggt |
21785628 |
T |
|
| Q |
222 |
cattttgacgatgatgtaattttaactttaaccggcaagtctc |
264 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||| |||||| |
|
|
| T |
21785629 |
cattttagcgatgatg---ttttaactttaaccggccagtctc |
21785668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 22 - 264
Target Start/End: Complemental strand, 21808290 - 21808051
Alignment:
| Q |
22 |
atctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaa |
121 |
Q |
| |
|
|||||||||| |||| ||| |||||||| |||||||||||||||| | ||||||||||||||||||||||| |||| | ||||||||||||||| ||| |
|
|
| T |
21808290 |
atctcagaaatagaacaaatcttgagaagcattactcacccaagttggtatcaataggtcctatccatcatggaaatataaatctgaagttaggagagaa |
21808191 |
T |
|
| Q |
122 |
gtacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggt |
221 |
Q |
| |
|
|||||||||||||||| | || |||||||| ||||| | | ||| || | |||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21808190 |
gtacaagcttatgtggtctgcgaaatacatagaaaacagcggctttattctagaggatctacacaaaaagattgctgataacatcgatgaactgaagggt |
21808091 |
T |
|
| Q |
222 |
cattttgacgatgatgtaattttaactttaaccggcaagtctc |
264 |
Q |
| |
|
||||||| ||| |||| ||||||||||||||||| |||||| |
|
|
| T |
21808090 |
cattttggcgacgatg---ttttaactttaaccggccagtctc |
21808051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 21771985 - 21772200
Alignment:
| Q |
23 |
tctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaag |
122 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| ||| ||| |||||| |||| || |||| |
|
|
| T |
21771985 |
tctcagaaatagaaaaaactttgagaagcattactcacccaagtgtgtgtcaataggtcctattcatcatcataacacaaatctgatattagcagagaag |
21772084 |
T |
|
| Q |
123 |
tacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggtc |
222 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| || | |||| |||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
21772085 |
tacaaacttatgtgggcagcaaaatacatagaaaataacggatacattccagaggatctacacaaaaagattgctgataacattgatgaactgaagggtc |
21772184 |
T |
|
| Q |
223 |
attttgacgatgatgt |
238 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
21772185 |
attttgacgatgatgt |
21772200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 21992196 - 21992410
Alignment:
| Q |
22 |
atctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacag---------atctgaagtt |
112 |
Q |
| |
|
|||||| ||| |||||| ||||||||||| | ||||||||||| || ||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
21992196 |
atctcaaaaatagaaaagactttgagaagcactactcacccaaattggtgtcaataggtcctatccatcatggcaatacaagcaatgcaaatctgaagtt |
21992295 |
T |
|
| Q |
113 |
aggagggaagtacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaa |
212 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||||| |||||| || ||||||||||| | |||||||||||||||||| | |||||||| |||||| |
|
|
| T |
21992296 |
aggagagaagtacaagcttacgtgggcagcaaaatacatcgaaaatgcaggacttaatccatgcgatctacacaaaaagattatcgataacattgatgaa |
21992395 |
T |
|
| Q |
213 |
ctgaagggtcatttt |
227 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
21992396 |
ctgaagggtcatttt |
21992410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 230
Target Start/End: Original strand, 21714209 - 21714414
Alignment:
| Q |
25 |
tcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaagta |
124 |
Q |
| |
|
||||||| |||| ||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||| ||| || |||||||| ||||| |||||| |
|
|
| T |
21714209 |
tcagaaatagaacaaattttgagaagcattactcacccaagtttgtgtcattaggtcctatccatcatgacaatccaaatctgaagaaaggagagaagta |
21714308 |
T |
|
| Q |
125 |
caagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggtcat |
224 |
Q |
| |
|
||| ||||||||||||||||||||||| ||||| || |||| | |||| |||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
21714309 |
caaacttatgtgggcagcaaaatacatagaaaacaccagacacattccagaggatctacacaaaaagattgcagataacattgatgaactgaagggtcat |
21714408 |
T |
|
| Q |
225 |
tttgac |
230 |
Q |
| |
|
|||||| |
|
|
| T |
21714409 |
tttgac |
21714414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 21725920 - 21726135
Alignment:
| Q |
23 |
tctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaag |
122 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| || ||| |||||| |||| || | || |
|
|
| T |
21725920 |
tctcagaaatagaaaaaactttgagaagcattactcacccaagtgtgtgtcaataggtcctattcatcatcagaacacaaatctgatattagcagagtag |
21726019 |
T |
|
| Q |
123 |
tacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggtc |
222 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| || ||| | |||| |||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
21726020 |
tacaaacttatgtgggcagcaaaatacatagaaaacaccggacacattccagaggatctacacaaaaagattgctgataacattgatgaactgaagggtc |
21726119 |
T |
|
| Q |
223 |
attttgacgatgatgt |
238 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
21726120 |
attttgacgacgatgt |
21726135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 21628148 - 21628353
Alignment:
| Q |
22 |
atctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaa |
121 |
Q |
| |
|
|||||||||| | |||| | |||| ||||||||||||||||||||| ||||||||||||||||||||||||| | |||| ||||||| |||||| ||| |
|
|
| T |
21628148 |
atctcagaaataaaaaagattttgggaagtattactcacccaagtttgtgtcaataggtcctatccatcatggcagtacaaatctgaacataggagagaa |
21628247 |
T |
|
| Q |
122 |
gtacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggt |
221 |
Q |
| |
|
|||||||||| |||||||| |||||||||| ||||| | |||||| |||| ||| |||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
21628248 |
gtacaagcttgtgtgggcatcaaaatacatagaaaacattggacttattccagaggaactacacaaaaagattgctgataacattgatgaactgaagggt |
21628347 |
T |
|
| Q |
222 |
catttt |
227 |
Q |
| |
|
| |||| |
|
|
| T |
21628348 |
cgtttt |
21628353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 264
Target Start/End: Original strand, 21764121 - 21764324
Alignment:
| Q |
58 |
cacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaagtacaagcttatgtgggcagcaaaatacattgaaaa |
157 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||| |
|
|
| T |
21764121 |
cacccaagttgttgtcaataggtcctatccatcatgacagatcagatctgaagttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaa |
21764220 |
T |
|
| Q |
158 |
tacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggtcattttgacgatgatgtaattttaactttaaccggc |
257 |
Q |
| |
|
|| |||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||| |||| |||||||| ||||||||||||| || |
|
|
| T |
21764221 |
caccgcacttaatccagaggaactacaccaaaagattgctgataacatcgatgaactgaagggtcgttttagcgatgatg---ttttaactttaactgga |
21764317 |
T |
|
| Q |
258 |
aagtctc |
264 |
Q |
| |
|
||||||| |
|
|
| T |
21764318 |
aagtctc |
21764324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 264
Target Start/End: Original strand, 21646750 - 21647005
Alignment:
| Q |
6 |
caaagggtgccacataatctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatc |
105 |
Q |
| |
|
|||||||||||||| |||||||||| |||| ||| |||||| || ||||| | |||||||| |||||||||||||||||||||||| ||| || | | |
|
|
| T |
21646750 |
caaagggtgccacagtatctcagaaatagaacaaaatttgaggagcattacacccccaagttggtgtcaataggtcctatccatcatgacaatccaaagc |
21646849 |
T |
|
| Q |
106 |
tgaagttaggagggaagtacaagcttatgtgggcagcaaaatacattgaaaatac---aagacttaatccacgggatctacacaaaaagattgttgataa |
202 |
Q |
| |
|
||||| |||||| ||| ||||||||||||||||||||||||||||| |||| || |||| |||| ||||||||||||||||||||| ||||| |
|
|
| T |
21646850 |
tgaagataggagagaaatacaagcttatgtgggcagcaaaatacatcaaaaacacgggaagaattaa---gaaggatctacacaaaaagattgtagataa |
21646946 |
T |
|
| Q |
203 |
catcgatgaactgaagggtcattttgacgatgatgtaattttaactttaaccggcaagtctc |
264 |
Q |
| |
|
||| ||||||||||||||||||||| ||| || | |||||||||| ||||||||||||| |
|
|
| T |
21646947 |
cattgatgaactgaagggtcattttagcgacgacg---ttttaactttgaccggcaagtctc |
21647005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 264
Target Start/End: Original strand, 21623246 - 21623455
Alignment:
| Q |
52 |
attactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaagtacaagcttatgtgggcagcaaaatacat |
151 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
21623246 |
attactcacccaagttggtgtcaataggtcctatccatcatggcaatacaaatctgaagttaggagagaagtacaagcttatgtgggcagcaaaatacat |
21623345 |
T |
|
| Q |
152 |
tgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggtcattttgacgatgatgtaattttaacttta |
251 |
Q |
| |
|
|||| || ||| || |||| | ||||| ||||||| |||||| || ||||||||||||||||||||| || |||| ||||||||||| |
|
|
| T |
21623346 |
caaaaacaccagaaaagttcagaaggatatgcacaacaagattgctgataatattgatgaactgaagggtcattttagtgacgatg---ttttaacttta |
21623442 |
T |
|
| Q |
252 |
accggcaagtctc |
264 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
21623443 |
accggaaagtctc |
21623455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 60 - 264
Target Start/End: Original strand, 21681711 - 21681912
Alignment:
| Q |
60 |
cccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaagtacaagcttatgtgggcagcaaaatacattgaaaata |
159 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||| | |
|
|
| T |
21681711 |
cccaagtttgtgtcaataggtcctatccatcatggcaatacagatctaaagttaggagagaagtacaagcttatgtgggcagcaaaatacatcaaaaaca |
21681810 |
T |
|
| Q |
160 |
caagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggtcattttgacgatgatgtaattttaactttaaccggcaa |
259 |
Q |
| |
|
| || | || | ||||||| ||||||| |||| ||||||||| |||||| ||||||| |||||| ||| |||| ||||||||||||||||| | |
|
|
| T |
21681811 |
ctggaagcattcaaaaggatctatacaaaaaaattgctgataacattgatgaattgaagggccattttagcgacgatg---ttttaactttaaccggcga |
21681907 |
T |
|
| Q |
260 |
gtctc |
264 |
Q |
| |
|
||||| |
|
|
| T |
21681908 |
gtctc |
21681912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 21745555 - 21745760
Alignment:
| Q |
22 |
atctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaa |
121 |
Q |
| |
|
|||||| ||| |||| ||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||| ||| || |||| ||| ||||| | |
|
|
| T |
21745555 |
atctcataaatagaacaaattttgagaagcattactcacccaagttggtgtcattaggtcctatccatcatgacaatccaaatctaaagacaggagaaga |
21745654 |
T |
|
| Q |
122 |
gtacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggt |
221 |
Q |
| |
|
||| |||||||||||||||||||||||| | || |||||| | | ||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
21745655 |
gtataagcttatgtgggcagcaaaatacctcgagaatacaggccacaatccacacgatctgcacaaaaagattgttgataacattgatgaactgaagggt |
21745754 |
T |
|
| Q |
222 |
catttt |
227 |
Q |
| |
|
| |||| |
|
|
| T |
21745755 |
cgtttt |
21745760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 22 - 238
Target Start/End: Original strand, 21689436 - 21689652
Alignment:
| Q |
22 |
atctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaa |
121 |
Q |
| |
|
|||||||||| ||| |||| ||||||||| |||| | || | ||| |||||| |||||||||||||||||| |||| | ||| |||||||||| ||| |
|
|
| T |
21689436 |
atctcagaaatagagaaaaatttgagaagcattagaccccgaggttgatgtcaaaaggtcctatccatcatggcaataaatctctaaagttaggagagaa |
21689535 |
T |
|
| Q |
122 |
gtacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggt |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| || || | || |||||||||||||||| |||||||||||||| ||| ||||||||||| |
|
|
| T |
21689536 |
gtacaagcttatgtgggcagcaaaatacatcaaaaacactggaagcattcagagggatctacacaaaaacattgttgataacattgataaactgaagggt |
21689635 |
T |
|
| Q |
222 |
cattttgacgatgatgt |
238 |
Q |
| |
|
|||||||| || ||||| |
|
|
| T |
21689636 |
cattttgatgacgatgt |
21689652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 264
Target Start/End: Original strand, 21652076 - 21652331
Alignment:
| Q |
6 |
caaagggtgccacataatctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatc |
105 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| || |||||||| ||||| | |||||||| | |||||||||||||||||||||| |||||| || |
|
|
| T |
21652076 |
caaagggtgccacagtatctcagaaatagaaacaattttgagaaacattacacccccaagtttgtttcaataggtcctatccatcatgacaatacaaata |
21652175 |
T |
|
| Q |
106 |
tgaagttaggagggaagtacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacat |
205 |
Q |
| |
|
|||| ||||| | |||| |||||||||||||||||||||||||| ||||| | | ||| || | ||||| |||||||||||||| ||||| || |
|
|
| T |
21652176 |
tgaaaccaggagaggagtataagcttatgtgggcagcaaaatacatagaaaacaacggctttattctagaggatcgacacaaaaagattgccgataaaat |
21652275 |
T |
|
| Q |
206 |
cgatgaactgaagggtcattttgacgatgatgtaattttaactttaaccggcaagtctc |
264 |
Q |
| |
|
| ||||| |||||||||||| ||| |||| ||||||||||||| |||||||||| |
|
|
| T |
21652276 |
taacgaactaaagggtcattttagcgacgatg---ttttaactttaactggcaagtctc |
21652331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 262
Target Start/End: Original strand, 15713646 - 15713883
Alignment:
| Q |
22 |
atctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaa |
121 |
Q |
| |
|
|||||||||| || ||||| | ||||| | ||||| |||| ||||| | |||||||| ||||||||||||| |||||| |||| |||| ||| | ||| |
|
|
| T |
15713646 |
atctcagaaaaagtaaaaattatgagatgcattacgcacctaagttggtttcaataggccctatccatcatgacaatacaaatctaaagtcaggggagaa |
15713745 |
T |
|
| Q |
122 |
gtacaagcttatgtgggcagcaaaatacattgaaaatacaagacttaatccacgggatctacacaaaaagattgttgataacatcgatgaactgaagggt |
221 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||| || || | || | ||| || ||||||||||||| ||||||||| |||||||||||| || |
|
|
| T |
15713746 |
gtacaagcttatgtgggcggcaaaatacatcaaaaacactggaagcattctagaggaactgcacaaaaagattgctgataacattgatgaactgaagtgt |
15713845 |
T |
|
| Q |
222 |
cattttgacgatgatgtaattttaactttaaccggcaagtc |
262 |
Q |
| |
|
|||||| || |||| |||||||||||||||| ||||| |
|
|
| T |
15713846 |
cattttagtgacgatg---ttttaactttaaccggaaagtc |
15713883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 21792034 - 21792163
Alignment:
| Q |
22 |
atctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaa |
121 |
Q |
| |
|
|||||||||| ||| |||| ||||||||| ||||| || | ||| | ||||||||||| ||||||||||| | |||||||||| ||||||||| ||| |
|
|
| T |
21792034 |
atctcagaaagagagaaaattttgagaagcattacatcccaaggtttgtatcaataggtcccatccatcatggcagtacagatctggagttaggagagaa |
21792133 |
T |
|
| Q |
122 |
gtacaagcttatgtgggcagcaaaatacat |
151 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |
|
|
| T |
21792134 |
gtacaagcttatgtgggcagcagaatacat |
21792163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 25370 - 25468
Alignment:
| Q |
59 |
acccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaagtacaagcttatgtgggcagcaaaatacattgaaaa |
157 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||| |
|
|
| T |
25370 |
acccaagttggtgtcaataggtcctatccatcatgacaataaaaatctgaagttaggagagaagtacaagcttaagtgggcagcagaatacatagaaaa |
25468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 18192338 - 18192233
Alignment:
| Q |
42 |
tttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggtaatacagatctgaagttaggagggaagtacaagcttatgtgggcag |
141 |
Q |
| |
|
||||||||| ||||||| ||||| || | ||||| |||||||||||||||||| || || || ||||| ||| |||||||||||| |||||||| |
|
|
| T |
18192338 |
tttgagaagcattactcgcccaaattggtatcaatgggtcctatccatcatggtcgcccaaatttggagttatgagagaagtacaagctacagtgggcag |
18192239 |
T |
|
| Q |
142 |
caaaat |
147 |
Q |
| |
|
|||||| |
|
|
| T |
18192238 |
caaaat |
18192233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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