View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10498_low_57 (Length: 244)
Name: NF10498_low_57
Description: NF10498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10498_low_57 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 230
Target Start/End: Original strand, 2529595 - 2529810
Alignment:
| Q |
15 |
catcaagagttgcaaaatttacctcgtcgccgttttcattagctatttttcggatatcattttgcatagaccaataaggctgtggagattgtaaacctgt |
114 |
Q |
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| T |
2529595 |
catcaagagttgcaaaatttacctcgtcgccgttttcattaggtatttttcggatatcattttgcatagaccaataaggctgtggagattgtaaacctgt |
2529694 |
T |
|
| Q |
115 |
ggaaagaagaacattaccagaatgtgattcaatttcgaggacataggtgaaattgttagaatcaggttcactgataagtttcattcctttggtgaatttt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2529695 |
ggaaagaagaacattaccagaatgtgattcaatttcgaggacataggtgaaattgttagaatcaggttcactgataagtttcattcctttggtgaatttt |
2529794 |
T |
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| Q |
215 |
tgcattggtaataatg |
230 |
Q |
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|||||||||||||||| |
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| T |
2529795 |
tgcattggtaataatg |
2529810 |
T |
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