View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10498_low_73 (Length: 220)
Name: NF10498_low_73
Description: NF10498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10498_low_73 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 34649959 - 34650158
Alignment:
| Q |
1 |
cttttattaagataactaaagtttacaaagaaattagtgccacaaagccaaattaaaatacataatggacaaaactaaatgccgcatcattgctcccatc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34649959 |
cttttattaagataactaaagtttacaaagaaattagtgccacaaagccaaattagaatacataatggacaaaactaaatgccgcatcattgctcccatc |
34650058 |
T |
|
| Q |
101 |
caacacataacagaaccagaaaagcataatgatacccccattgttactaattaacaacgataaaatctgagagtccacgaattctgagtggtgtttactg |
200 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34650059 |
caacacattacagaaccagaaaagcataatgatacccccattgttactaattaacaacgataaaatctgagagtccacgaattctgagtggtgtttactg |
34650158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University