View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10499_high_12 (Length: 249)

Name: NF10499_high_12
Description: NF10499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10499_high_12
NF10499_high_12
[»] chr2 (22 HSPs)
chr2 (73-242)||(12841696-12841866)
chr2 (63-234)||(44085852-44086023)
chr2 (59-242)||(41166508-41166692)
chr2 (59-221)||(13194279-13194440)
chr2 (59-236)||(15320145-15320313)
chr2 (67-242)||(31719631-31719808)
chr2 (59-209)||(12041146-12041287)
chr2 (59-217)||(27898712-27898865)
chr2 (59-194)||(12884775-12884911)
chr2 (83-242)||(22014314-22014473)
chr2 (60-242)||(27301048-27301221)
chr2 (8-122)||(5862161-5862273)
chr2 (59-224)||(36500171-36500339)
chr2 (60-121)||(1331462-1331523)
chr2 (64-121)||(11678455-11678512)
chr2 (144-236)||(11051037-11051129)
chr2 (127-211)||(26316552-26316636)
chr2 (143-219)||(43452499-43452574)
chr2 (60-115)||(10242306-10242361)
chr2 (70-116)||(1537054-1537100)
chr2 (68-121)||(11695933-11695986)
chr2 (62-106)||(28790933-28790977)
[»] chr6 (18 HSPs)
chr6 (60-208)||(13531823-13531967)
chr6 (63-238)||(891892-892068)
chr6 (60-236)||(19134655-19134826)
chr6 (73-219)||(20500937-20501088)
chr6 (127-225)||(4577461-4577560)
chr6 (59-242)||(9686402-9686581)
chr6 (144-242)||(7169712-7169811)
chr6 (158-236)||(32190328-32190406)
chr6 (60-236)||(12108136-12108302)
chr6 (62-120)||(11417516-11417574)
chr6 (163-242)||(22414162-22414242)
chr6 (144-211)||(6400211-6400278)
chr6 (143-242)||(29048900-29048998)
chr6 (59-100)||(6267490-6267531)
chr6 (59-100)||(29049027-29049068)
chr6 (184-242)||(24644626-24644684)
chr6 (184-225)||(8064859-8064899)
chr6 (8-49)||(32190234-32190275)
[»] chr3 (30 HSPs)
chr3 (60-225)||(44651333-44651489)
chr3 (59-210)||(42362764-42362916)
chr3 (59-235)||(22255843-22256019)
chr3 (60-217)||(50578543-50578702)
chr3 (75-236)||(51660562-51660724)
chr3 (59-178)||(5640270-5640390)
chr3 (59-234)||(26758591-26758762)
chr3 (60-156)||(38651586-38651685)
chr3 (60-207)||(8557323-8557460)
chr3 (112-217)||(37045690-37045796)
chr3 (2-236)||(55467127-55467365)
chr3 (59-225)||(4280658-4280830)
chr3 (63-219)||(48169049-48169201)
chr3 (59-210)||(10481159-10481316)
chr3 (59-222)||(8355703-8355866)
chr3 (61-154)||(51661919-51662013)
chr3 (59-121)||(52632602-52632664)
chr3 (163-242)||(2565981-2566061)
chr3 (165-236)||(2832037-2832108)
chr3 (59-209)||(25918798-25918949)
chr3 (60-153)||(4555062-4555156)
chr3 (143-225)||(17144362-17144444)
chr3 (127-224)||(20846846-20846943)
chr3 (180-225)||(38681587-38681631)
chr3 (59-100)||(45914761-45914802)
chr3 (61-210)||(46252992-46253148)
chr3 (59-106)||(17144288-17144335)
chr3 (176-225)||(38651692-38651741)
chr3 (195-235)||(4764068-4764108)
chr3 (144-236)||(45629552-45629644)
[»] chr7 (37 HSPs)
chr7 (60-242)||(524414-524597)
chr7 (59-217)||(40849237-40849396)
chr7 (75-172)||(30079152-30079250)
chr7 (63-236)||(27456687-27456856)
chr7 (7-225)||(48643157-48643363)
chr7 (73-225)||(8117841-8117993)
chr7 (59-242)||(27100153-27100331)
chr7 (59-242)||(27177972-27178150)
chr7 (61-235)||(11399482-11399657)
chr7 (61-161)||(37376194-37376300)
chr7 (79-236)||(6879662-6879820)
chr7 (63-203)||(29628606-29628747)
chr7 (61-221)||(30855470-30855628)
chr7 (59-234)||(22298893-22299068)
chr7 (59-236)||(7697651-7697834)
chr7 (148-236)||(16535383-16535471)
chr7 (148-236)||(16630191-16630279)
chr7 (163-242)||(1812833-1812912)
chr7 (144-225)||(20334963-20335044)
chr7 (60-211)||(8568095-8568247)
chr7 (59-119)||(31287322-31287382)
chr7 (59-236)||(43202774-43202942)
chr7 (113-234)||(2734686-2734809)
chr7 (144-236)||(29211248-29211338)
chr7 (128-236)||(36550824-36550932)
chr7 (180-234)||(21237438-21237492)
chr7 (59-236)||(31011310-31011487)
chr7 (111-242)||(35495760-35495893)
chr7 (67-120)||(35819659-35819712)
chr7 (166-217)||(26208941-26208992)
chr7 (66-121)||(46147680-46147735)
chr7 (180-242)||(27214859-27214920)
chr7 (158-236)||(47646406-47646484)
chr7 (8-120)||(10338028-10338140)
chr7 (113-225)||(23033051-23033163)
chr7 (61-106)||(24477841-24477886)
chr7 (147-236)||(33435341-33435430)
[»] chr1 (37 HSPs)
chr1 (60-210)||(11072917-11073068)
chr1 (59-225)||(44056104-44056271)
chr1 (87-236)||(8269005-8269155)
chr1 (59-242)||(18310320-18310504)
chr1 (59-223)||(18834106-18834271)
chr1 (59-242)||(36202993-36203178)
chr1 (62-242)||(6248427-6248603)
chr1 (61-225)||(32909917-32910082)
chr1 (73-210)||(8165098-8165241)
chr1 (59-218)||(35375545-35375701)
chr1 (81-236)||(52380299-52380457)
chr1 (59-242)||(27507057-27507241)
chr1 (127-242)||(9330752-9330867)
chr1 (59-236)||(6693653-6693824)
chr1 (59-210)||(25507262-25507404)
chr1 (60-242)||(35979831-35980003)
chr1 (60-236)||(35992144-35992320)
chr1 (63-212)||(26063762-26063911)
chr1 (127-236)||(9249705-9249813)
chr1 (133-217)||(21685172-21685256)
chr1 (63-242)||(40094730-40094895)
chr1 (60-106)||(16537384-16537430)
chr1 (60-122)||(17652202-17652264)
chr1 (59-208)||(17989432-17989577)
chr1 (59-119)||(16063284-16063344)
chr1 (59-222)||(45949080-45949238)
chr1 (163-225)||(23474752-23474815)
chr1 (77-217)||(39157872-39158014)
chr1 (59-100)||(9961794-9961835)
chr1 (59-116)||(26344603-26344660)
chr1 (165-242)||(26344700-26344777)
chr1 (196-236)||(19051481-19051521)
chr1 (59-122)||(12974044-12974107)
chr1 (59-121)||(10847077-10847139)
chr1 (59-105)||(50471580-50471626)
chr1 (144-217)||(16537453-16537526)
chr1 (59-100)||(25533308-25533349)
[»] scaffold0204 (2 HSPs)
scaffold0204 (60-242)||(26219-26397)
scaffold0204 (59-121)||(14995-15057)
[»] chr4 (46 HSPs)
chr4 (60-242)||(48338697-48338875)
chr4 (2-225)||(46471797-46472008)
chr4 (7-236)||(20986759-20986987)
chr4 (7-154)||(45983773-45983919)
chr4 (59-236)||(41325755-41325933)
chr4 (59-242)||(21069410-21069595)
chr4 (59-219)||(32222860-32223020)
chr4 (63-225)||(1564606-1564772)
chr4 (59-210)||(8485064-8485216)
chr4 (127-242)||(3666683-3666798)
chr4 (143-222)||(8312256-8312335)
chr4 (60-156)||(15724278-15724370)
chr4 (59-236)||(18536204-18536383)
chr4 (60-236)||(29233109-29233281)
chr4 (75-225)||(5121947-5122093)
chr4 (59-217)||(36106015-36106174)
chr4 (59-225)||(48602055-48602221)
chr4 (60-121)||(23119852-23119913)
chr4 (59-116)||(54273479-54273536)
chr4 (144-236)||(14867126-14867218)
chr4 (59-122)||(27743809-27743872)
chr4 (127-225)||(4689051-4689149)
chr4 (62-242)||(28148119-28148299)
chr4 (158-236)||(6102247-6102324)
chr4 (59-212)||(23449530-23449683)
chr4 (2-120)||(45150481-45150597)
chr4 (60-122)||(48292976-48293038)
chr4 (59-225)||(18319126-18319298)
chr4 (59-225)||(18396691-18396863)
chr4 (184-217)||(29701012-29701045)
chr4 (59-242)||(41260462-41260647)
chr4 (73-121)||(23625474-23625522)
chr4 (59-118)||(25686031-25686089)
chr4 (79-225)||(40494783-40494928)
chr4 (127-242)||(41312286-41312401)
chr4 (127-225)||(35232910-35233008)
chr4 (87-210)||(45464541-45464670)
chr4 (59-139)||(3999211-3999292)
chr4 (184-225)||(7763770-7763811)
chr4 (71-120)||(19753093-19753142)
chr4 (71-120)||(19786664-19786713)
chr4 (144-236)||(18399383-18399475)
chr4 (73-148)||(18881612-18881688)
chr4 (195-235)||(35014635-35014675)
chr4 (184-212)||(48653566-48653594)
chr4 (184-236)||(51907411-51907463)
[»] chr5 (34 HSPs)
chr5 (7-156)||(691105-691253)
chr5 (127-242)||(11402952-11403066)
chr5 (61-218)||(18432467-18432625)
chr5 (80-213)||(39730637-39730770)
chr5 (59-236)||(22553717-22553894)
chr5 (60-225)||(2423180-2423340)
chr5 (59-219)||(6633680-6633842)
chr5 (111-225)||(38147482-38147597)
chr5 (60-156)||(6595372-6595464)
chr5 (59-225)||(41455244-41455411)
chr5 (59-172)||(23623426-23623540)
chr5 (8-207)||(4414609-4414806)
chr5 (59-236)||(42920589-42920761)
chr5 (59-236)||(25495450-25495629)
chr5 (143-236)||(41805454-41805547)
chr5 (59-212)||(40109091-40109241)
chr5 (127-208)||(14652845-14652924)
chr5 (61-217)||(8541875-8542030)
chr5 (59-120)||(28224409-28224470)
chr5 (163-242)||(10090583-10090662)
chr5 (1-120)||(17131601-17131718)
chr5 (61-124)||(22747144-22747207)
chr5 (144-242)||(32721036-32721135)
chr5 (67-120)||(32243960-32244013)
chr5 (85-124)||(12378661-12378700)
chr5 (59-118)||(36568185-36568244)
chr5 (163-225)||(2802634-2802696)
chr5 (73-122)||(12680673-12680722)
chr5 (73-106)||(14652931-14652964)
chr5 (127-236)||(23418328-23418437)
chr5 (192-236)||(31075299-31075343)
chr5 (59-115)||(33793108-33793164)
chr5 (113-242)||(34111381-34111506)
chr5 (165-225)||(36568085-36568145)
[»] scaffold0688 (4 HSPs)
scaffold0688 (68-225)||(1544-1707)
scaffold0688 (80-236)||(3127-3288)
scaffold0688 (179-225)||(8113-8159)
scaffold0688 (179-236)||(4794-4850)
[»] chr8 (30 HSPs)
chr8 (59-220)||(12659815-12659976)
chr8 (75-241)||(9012395-9012563)
chr8 (59-236)||(28441829-28442007)
chr8 (113-222)||(27674893-27675003)
chr8 (60-236)||(24681633-24681811)
chr8 (102-242)||(1271487-1271628)
chr8 (60-121)||(31477759-31477820)
chr8 (144-212)||(30942944-30943012)
chr8 (143-225)||(40436808-40436890)
chr8 (144-222)||(44024550-44024628)
chr8 (59-120)||(8036061-8036122)
chr8 (59-116)||(13325773-13325830)
chr8 (59-100)||(44334591-44334632)
chr8 (143-219)||(12193092-12193168)
chr8 (143-219)||(12437520-12437596)
chr8 (59-115)||(28072684-28072740)
chr8 (59-122)||(11219440-11219503)
chr8 (144-219)||(28801950-28802025)
chr8 (2-120)||(36340271-36340387)
chr8 (63-100)||(11017434-11017471)
chr8 (158-223)||(12073865-12073930)
chr8 (63-219)||(22810737-22810894)
chr8 (59-116)||(35687884-35687941)
chr8 (177-217)||(11219335-11219375)
chr8 (158-225)||(15452311-15452378)
chr8 (59-122)||(26774881-26774944)
chr8 (158-231)||(12070925-12070998)
chr8 (176-242)||(30252732-30252800)
chr8 (73-121)||(3682350-3682398)
chr8 (82-122)||(19539690-19539730)
[»] scaffold0001 (1 HSPs)
scaffold0001 (90-236)||(428005-428152)
[»] scaffold0664 (1 HSPs)
scaffold0664 (144-236)||(6341-6433)
[»] scaffold0015 (1 HSPs)
scaffold0015 (67-120)||(62855-62908)


Alignment Details
Target: chr2 (Bit Score: 131; Significance: 5e-68; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 73 - 242
Target Start/End: Complemental strand, 12841866 - 12841696
Alignment:
Q  73 tttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaat 171  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  12841866 tttggtttggtttgcggttttcattttaccaaccgatccaaaccaaaccacaccgcaacataagaaaaatgttaattaaacatatctcacgtagaccaat 12841767  T
Q  172 atttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    | ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  12841766 acttatatatattcaatggaaactgttataaaatgacatatattttctcttgttcagattcttctttgctt 12841696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 63 - 234
Target Start/End: Complemental strand, 44086023 - 44085852
Alignment:
Q  63 aaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcac 161  Q
    ||||||||| |||||||||||||| ||||||||||| | ||||||| ||||||||||||| ||| ||||| ||||||||||||||||||| |||||||||    
T  44086023 aaccgcatggtttggtttggtttgtggttttcatttcaccaaccgaaccaaaccaaaccaaaccgcaacataagaaaaatgttaattaaaaatatctcac 44085924  T
Q  162 gtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattctt 234  Q
     |||||||||| |  |  |||||||||  |||||||||||||||||||||| |||||| ||||| ||||||||    
T  44085923 ctagaccaatactcgtggaaattcaattgaaacttttataaaatgacatattttttcttttgtt-agattctt 44085852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 41166692 - 41166508
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||| ||||| || ||||    ||||||||  |||     
T  41166692 actcaaccgcatggtttgatttggtttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccacaacataataaaagcactaattaaatttatg 41166593  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    |||| |||||||||||| ||| ||| ||||||||   |||||||||||||||| | |||||||||||| || ||||||| |||||    
T  41166592 tcacctagaccaatattcatagaaactcaatgaatttttttataaaatgacatgttttttctcttgttaagtttcttctttgctt 41166508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 221
Target Start/End: Complemental strand, 13194440 - 13194279
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    |||||||| |||| ||||||||| ||||||||||| ||||||   |||||  |||||||||||| ||| ||||| ||||||||  ||||||||| |||||    
T  13194440 actcaaccacatggtttggtttgatttgcggtttttattttacggaccgaatcaaaccaaaccaaaccacaacataagaaaaactttaattaaatatatc 13194341  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctct 221  Q
      || |||||||||| | ||| ||| |||||| |||||||||||||||||||||| ||||||||    
T  13194340 --acctagaccaatactcatagaaaatcaatggaaacttttataaaatgacatattttttctct 13194279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 15320145 - 15320313
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    |||||||| |||| ||||||||||||||||||||| |||||| || | || |||||||          ||||| ||||||||  |||||||||||||| |    
T  15320145 actcaaccacatggtttggtttggtttgcggtttttattttaccatctgaaccaaaccg---------caacataagaaaaacattaattaaacatatgt 15320235  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||| |||||| ||| ||||| ||| ||||||||||||||||||||||| ||||| |||||||||| | || |||||||    
T  15320236 cacctagacccatacttatagaaactcaatgaaaacttttataaaatggcatattttttctcttgataagtttcttct 15320313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 242
Target Start/End: Original strand, 31719631 - 31719808
Alignment:
Q  67 gcatgatttggtttggtttgcg-gttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaac-atatctcacgt 163  Q
    ||||| |||| ||||||||||| ||||||||||||  |||||| |||||||||| || ||| ||||| || ||||    ||||||||  |||| | || |    
T  31719631 gcatggtttgatttggtttgcgtgttttcattttactaaccgaaccaaaccaaatcaaaccgcaacataataaaaccactaattaaaatatatgttacct 31719730  T
Q  164 agaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    ||||||||| ||||| ||| ||| || |||||||| ||||||||||||| |||||||||||| || || ||||||||||    
T  31719731 agaccaatacttatagaaactcagtggaaacttttgtaaaatgacatattttttctcttgttaag-tttttctctgctt 31719808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 12041146 - 12041287
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||     |||||||||||    | ||||| ||||||||  |||||||||  ||| |    
T  12041146 actcaaccgcatagtttggtttggtttgcggttttcattttaccaa-----ccaaaccaaac----cgcaacataagaaaaactttaattaaatctatgt 12041236  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgaca 209  Q
    ||  ||||||| || | ||| ||| ||||||||||||||||||||| ||||    
T  12041237 catctagaccattactcatagaaactcaatgaaaacttttataaaacgaca 12041287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 217
Target Start/End: Complemental strand, 27898865 - 27898712
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    ||||||| ||||| |||| |||||||||   ||||||||||| ||||  | |||||| ||||||||    ||| ||||| ||||||||| |||||||  |    
T  27898865 actcaactgcatggtttgatttggtttgtaattttcattttaccaactaaaccaaactaaaccaca----acacaagaataatgttaat-aaacataagt 27898771  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatatttt 217  Q
    ||| |||| ||||| | ||| ||| |||||||||||||||||||||| |||||| ||||    
T  27898770 cacctagatcaatactcatagaaactcaatgaaaacttttataaaattacatatttttt 27898712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 12884911 - 12884775
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    |||||| |||||| ||||||| |||||| |||||| |||||| |||| || ||||||||||||| ||| ||| | | ||||||   |||||||| ||||     
T  12884911 actcaatcgcatggtttggttcggtttggggttttgattttaccaactgaaccaaaccaaaccaaaccgcaatatatgaaaaacactaattaaatatata 12884812  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaac 194  Q
    |||| |||||||||| ||||| ||| |||||| ||||    
T  12884811 tcacctagaccaatacttatagaaactcaatggaaac 12884775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 22014473 - 22014314
Alignment:
Q  83 tttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataa 181  Q
    ||||| ||||||||||||||||| || | |||| |||  | ||| ||||| ||||||||  |||||||||  ||| |||  |||| ||||| | ||| ||    
T  22014473 tttgcagttttcattttatcaactgaactaaacaaaattaaaccacaacataagaaaaacattaattaaatttatgtcatctagatcaatactcatagaa 22014374  T
Q  182 attcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
      |||||| |||||||||||||||||||||| |||||||||||| || ||||||| |||||    
T  22014373 tctcaatggaaacttttataaaatgacatat-ttttctcttgttaagtttcttctttgctt 22014314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 27301048 - 27301221
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacac-ccaacagaagaaaaatgttaattaaacatatct 158  Q
    |||||||||||| ||||||||||||||||||||||||||||          |||||||||||| ||  ||||| ||||||||| |||||||||   || |    
T  27301048 ctcaaccgcatggtttggtttggtttgcggttttcatttta----------caaaccaaaccaaacagcaacataagaaaaatattaattaaattcatgt 27301137  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    ||| |||| ||||| | ||| ||| || ||| ||||| ||| ||||| |||||| || ||||||||| || ||||||| |||||    
T  27301138 cacctagatcaatactcatagaaactccatggaaactattaaaaaattacatattttctctcttgttaagcttcttctttgctt 27301221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 5862161 - 5862273
Alignment:
Q  8 aaaccgcaaaaaattacatttggttcggatgtaatcagatcannnnnnnnnactcaaccgcatgatttggtttggtttgcggttttcattttatcaaccg 107  Q
    ||||||||||||||  ||||||||||||||||| ||||| ||         ||||||||||||| ||||||| |||||| |||||| |||||| |||||     
T  5862161 aaaccgcaaaaaatcgcatttggttcggatgtattcagagcactttttt--actcaaccgcatgttttggttcggtttgtggttttgattttaccaacca 5862258  T
Q  108 acccaaaccaaacca 122  Q
    | |||||||||||||    
T  5862259 aaccaaaccaaacca 5862273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 224
Target Start/End: Original strand, 36500171 - 36500339
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaacc-gacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacat-- 154  Q
    ||||||||||||  ||||||||||||| ||||||| |||||| ||||| || |||||||||| || ||| ||||| |  |||||   |||||||| ||      
T  36500171 actcaaccgcatagtttggtttggttttcggtttttattttaccaacccgaaccaaaccaaatcaaaccgcaacatagcaaaaacactaattaaa-atcg 36500269  T
Q  155 atctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgt 224  Q
    || |||| ||||| |||| | ||| ||| ||||||||||||||||||||||| ||||| | |||||||||    
T  36500270 atgtcacctagactaatactaatagaaactcaatgaaaacttttataaaatggcatatttgttctcttgt 36500339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 1331523 - 1331462
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacc 121  Q
    ||||||| |||| ||||||||||||||| ||||| ||||||||||| || ||||||||||||    
T  1331523 ctcaaccacatggtttggtttggtttgccgtttttattttatcaactgaaccaaaccaaacc 1331462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 11678512 - 11678455
Alignment:
Q  64 accgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacc 121  Q
    |||||||| ||||||||||||||||||||| |||||| ||||| | ||||||||||||    
T  11678512 accgcatggtttggtttggtttgcggttttgattttaccaaccaaaccaaaccaaacc 11678455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 11051037 - 11051129
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||||||||  ||| |||| |||||||||| || || ||| ||||| ||||||||||| ||||||||| | |||||||| ||| || |||||||    
T  11051037 taattaaatctatgtcacttagaccaatacttttaaaaactcaataaaaacttttatgaaatgacatgttttttctctcgttaagtttcttct 11051129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 26316636 - 26316552
Alignment:
Q  127 caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacata 211  Q
    ||||| |||| |||| |||||||||| ||| ||||  | || |||||| |||||||||||| || |||||||||| |||||||||    
T  26316636 caacataagagaaatattaattaaacttatgtcactcaaactaatattcatataaattcaacgagaacttttatagaatgacata 26316552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 43452574 - 43452499
Alignment:
Q  143 ttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttct 219  Q
    |||||||||||||| ||||  ||||||||||||||| ||| |||||| ||| |||||| ||| ||||||| ||||||    
T  43452574 ttaattaaacatatgtcaccaagaccaatatttatagaaactcaatgcaaatttttatgaaa-gacatattttttct 43452499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 10242306 - 10242361
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaac 115  Q
    |||||||||||| ||||||||||| ||||||||| |||||| ||||| | ||||||    
T  10242306 ctcaaccgcatgttttggtttggtctgcggtttttattttaccaaccaaaccaaac 10242361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 1537100 - 1537054
Alignment:
Q  70 tgatttggtttggtttgcggttttcattttatcaaccgacccaaacc 116  Q
    ||||||||||||||||| |||||| |||||| ||||||| |||||||    
T  1537100 tgatttggtttggtttgtggtttttattttaacaaccgaaccaaacc 1537054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 11695986 - 11695933
Alignment:
Q  68 catgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacc 121  Q
    |||| ||||||| ||||||||||||| |||||| ||||| | ||||||||||||    
T  11695986 catggtttggttcggtttgcggttttgattttaccaaccaaaccaaaccaaacc 11695933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 28790977 - 28790933
Alignment:
Q  62 caaccgcatgatttggtttggtttgcggttttcattttatcaacc 106  Q
    |||||| ||||||||||| ||||||||||||| |||||| |||||    
T  28790977 caaccgtatgatttggttcggtttgcggtttttattttaccaacc 28790933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 5e-40; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 208
Target Start/End: Original strand, 13531823 - 13531967
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctc 159  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||| | |||||||||||| ||    ||| |||||||||||||||||||||||||||    
T  13531823 ctcaaccgcatggtttggtttggtttgcgattttcattttaccaaccaaaccaaaccaaaccgca----acataagaaaaatgttaattaaacatatctc 13531918  T
Q  160 acgtagaccaatatttatataaattcaatgaaaacttttataaaatgac 208  Q
    || |||||||||| | ||| |||||||||| ||||||||||||||||||    
T  13531919 acctagaccaatactcatagaaattcaatggaaacttttataaaatgac 13531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 238
Target Start/End: Original strand, 891892 - 892068
Alignment:
Q  63 aaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcac 161  Q
    ||||||||| |||||||||||||||| |||||||||||  |||||| ||||| ||||| | ||| ||| | ||||||||  |||||||||  ||| ||||    
T  891892 aaccgcatggtttggtttggtttgcgcttttcattttacgaaccgaaccaaatcaaacgaaaccgcaaaataagaaaaactttaattaaatctatgtcac 891991  T
Q  162 gtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctct 238  Q
     || ||||||| ||||| ||| |||||| |||||||||||||||||||| | |||||||||||| || |||||||||    
T  891992 ctataccaatacttatagaaactcaatggaaacttttataaaatgacatgttttttctcttgttaagtttcttctct 892068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 236
Target Start/End: Original strand, 19134655 - 19134826
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctc 159  Q
    |||||||| ||| ||||||||||||||| |||||||||||| ||||||| |||||||||||| ||    ||| ||||||||   ||||||||  ||| ||    
T  19134655 ctcaaccgtatggtttggtttggtttgcagttttcattttaccaaccgaaccaaaccaaaccgca----acataagaaaaacactaattaaatctatgtc 19134750  T
Q  160 acgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    || ||||  |||| | ||| ||| | |||| ||||||||||||| |||||||| |||||||||||| || |||||||    
T  19134751 acctagataaatactcatagaaacttaatggaaacttttataaa-tgacatattttttctcttgttaagtttcttct 19134826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 20501088 - 20500937
Alignment:
Q  73 tttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc------caacagaagaaaaatgttaattaaacatatctcacgtaga 166  Q
    ||||||||  |||||||||||||||||| ||||||| ||||||||||||| |||      ||||| || |||||||||||||||||||||||| | || |    
T  20501088 tttggtttaatttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccaaaccgcaacataaaaaaaatgttaattaaacatatctcgcctaca 20500989  T
Q  167 ccaatatttatataaattcaatgaaaacttttataaaatgacatatattttct 219  Q
     ||||| | ||| |||||||| ||||||||||||  ||| |||||| ||||||    
T  20500988 -caatactcatagaaattcaaagaaaacttttattgaatcacatattttttct 20500937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 4577560 - 4577461
Alignment:
Q  127 caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacata-tattttctcttgtt 225  Q
    ||||| |||||||| | ||||||||| ||  ||| ||||||||||| | ||| ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  4577560 caacataagaaaaacgctaattaaacctaattcaggtagaccaatactcatagaaattcaatgaaaacttttataaaacgacatattattttctcttgtt 4577461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 9686581 - 9686402
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    ||||||||||||| |||| || || |||||||||| |||||| ||||||| |||||||||||  ||    |   ||||||||   |||||||| |||| |    
T  9686581 actcaaccgcatggtttgattcggattgcggttttgattttaccaaccgaaccaaaccaaactgca----atgtaagaaaaacactaattaaatatatat 9686486  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    ||  |||| ||||| | ||| |||||||||||||||||| ||||||| | |||| |||||||||||| || ||||||| |||||    
T  9686485 catctagatcaatactcatagaaattcaatgaaaactttaataaaataaaatattttttctcttgttaagtttcttctttgctt 9686402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 7169712 - 7169811
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatata-ttttctcttgttcagattcttctctgctt 242  Q
    |||||||| |||| |||  |||||||||| | ||| |||||||||||||||||| ||||||||||||||| |||||||| ||| || ||||||| |||||    
T  7169712 taattaaatatatatcatatagaccaatactcatagaaattcaatgaaaactttaataaaatgacatatatttttctctcgttaagtttcttctttgctt 7169811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 32190328 - 32190406
Alignment:
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||| ||||| |||||| ||| ||| |||||| |||||||||||||||||||||| |||||||||||| || |||||||    
T  32190328 tcacctagactaatattcatagaaactcaatggaaacttttataaaatgacatattttttctcttgttaagtttcttct 32190406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 236
Target Start/End: Original strand, 12108136 - 12108302
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctc 159  Q
    |||||||  ||| |||| |||||||||||||||||||||||||||||     |||||||||| ||    ||| || |||||    |||||||  ||| |     
T  12108136 ctcaaccttatggtttgatttggtttgcggttttcattttatcaacc-----aaaccaaaccgca----acataataaaaacacaaattaaatttatgta 12108226  T
Q  160 acgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    || |||||||||| | ||| ||| |||||||||| |||||||||||||||||| |||||||||||| || |||||||    
T  12108227 acctagaccaatactcatagaaactcaatgaaaa-ttttataaaatgacatattttttctcttgttaagtttcttct 12108302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 11417574 - 11417516
Alignment:
Q  62 caaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaac 120  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||  ||||||||||    
T  11417574 caaccgcatgatttggtttggtttgcggttttgattttaccaatcgaatcaaaccaaac 11417516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 242
Target Start/End: Complemental strand, 22414242 - 22414162
Alignment:
Q  163 tagaccaatatttatataaattcaatgaaaacttttataaaatgacata-tattttctcttgttcagattcttctctgctt 242  Q
    |||||||||| | | |||||||||||| ||||||| ||||||||||||| | |||||||||||| || ||||||| |||||    
T  22414242 tagaccaatactcacataaattcaatggaaactttaataaaatgacatatttttttctcttgttaagtttcttctttgctt 22414162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 6400278 - 6400211
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacata 211  Q
    |||||||| |||| |||  |||||||||| | |||||||||||||| ||||||| |||||||||||||    
T  6400278 taattaaatatatatcatctagaccaatactcatataaattcaatggaaactttaataaaatgacata 6400211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 29048998 - 29048900
Alignment:
Q  143 ttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    ||||||||| |||| |||  |||||||||| | ||| ||| |||||||||||||| |||||||||||| | ||||||| |||| || ||||||| |||||    
T  29048998 ttaattaaatatatatcatttagaccaatactcataaaaactcaatgaaaactttaataaaatgacat-ttttttctcatgttaagtttcttctttgctt 29048900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 6267531 - 6267490
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcatttta 100  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  6267531 actcaaccgcatggtttggtttggtttgcggtttttatttta 6267490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 29049068 - 29049027
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcatttta 100  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  29049068 actcaaccgcatggtttggtttggtttgcggttttgatttta 29049027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 24644626 - 24644684
Alignment:
Q  184 tcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    |||||||||||||| |||||||||||||| ||| |||| ||| || ||||||| |||||    
T  24644626 tcaatgaaaactttaataaaatgacatatttttactctcgttgagtttcttctttgctt 24644684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 8064899 - 8064859
Alignment:
Q  184 tcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  8064899 tcaatgaaaacttttataaa-tgacatatattttcttttgtt 8064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 32190234 - 32190275
Alignment:
Q  8 aaaccgcaaaaaattacatttggttcggatgtaatcagatca 49  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||    
T  32190234 aaaccgcaaaaaattacattttgtttggatgtattcagatca 32190275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 8e-39; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 60 - 225
Target Start/End: Complemental strand, 44651489 - 44651333
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctc 159  Q
    |||||||||||| ||||||||| |||| ||||||||||||| ||||||| |||||||          ||||| |||||||||||||||||||||||||||    
T  44651489 ctcaaccgcatggtttggtttgatttgtggttttcattttaccaaccgaaccaaaccg---------caacataagaaaaatgttaattaaacatatctc 44651399  T
Q  160 acgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    || |||||||||| | ||| |||||||||| |||||||||||||||||||||| ||||||||||||    
T  44651398 acttagaccaatactcatagaaattcaatggaaacttttataaaatgacatattttttctcttgtt 44651333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 42362764 - 42362916
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| ||  |||||||||||| ||| ||||| |||| |||| || |||||||||||     
T  42362764 actcaaccgcatggtttggtttggtttgcggttttcattttaccaactgaatcaaaccaaaccaaaccgcaacataagacaaatatttattaaacatatt 42362863  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacat 210  Q
    |||| |||||||||| |  |||||| |||||| ||||||||||||||||||||    
T  42362864 tcacctagaccaatactcttataaactcaatggaaacttttataaaatgacat 42362916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 22255843 - 22256019
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    |||||| |||||  ||||||| ||||||||||||| |||||||||||||||| ||||||||||| ||| | | | ||||||||   |||||||| ||||     
T  22255843 actcaatcgcatagtttggttcggtttgcggttttgattttatcaaccgacc-aaaccaaaccaaaccgcgatataagaaaaacactaattaaatatata 22255941  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttc 235  Q
    ||||||||||||||| | |||||||||||||| ||||||| ||||||||  |||| |||||||||||| || ||||||    
T  22255942 tcacgtagaccaatactcatataaattcaatggaaactttaataaaatgttatattttttctcttgttaagtttcttc 22256019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 217
Target Start/End: Original strand, 50578543 - 50578702
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatct 158  Q
    |||||||| |||||||||||||||||||||||||||||||| |||  || || |||||||||| ||| ||||| ||||||||||||| ||||| ||||||    
T  50578543 ctcaaccgtatgatttggtttggtttgcggttttcattttaccaattgaaccgaaccaaaccaaaccgcaacataagaaaaatgttagttaaatatatct 50578642  T
Q  159 cacgt-agaccaatatttatataaattcaatgaaaacttttataaaatgacatatatttt 217  Q
    ||| | ||||||||| | ||| ||| |||||| ||  |||||||||||||||||| ||||    
T  50578643 cacctaagaccaatactcatagaaactcaatggaagtttttataaaatgacatatttttt 50578702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 51660562 - 51660724
Alignment:
Q  75 tggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatat 173  Q
    ||||||||||||||||||| |||||| |||| ||  |||||||||||| ||| ||||| ||||||||  | || | |||| || |||| ||||||||||     
T  51660562 tggtttggtttgcggtttttattttaccaactgaatcaaaccaaaccaaaccgcaacataagaaaaacatcaactgaacacatttcacctagaccaatac 51660661  T
Q  174 ttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||||||| | || |||||||    
T  51660662 ttatagaaactcaatgaaaacttttataaaatgacatattttttctcttgataagtttcttct 51660724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 178
Target Start/End: Original strand, 5640270 - 5640390
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacac-ccaacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| ||| |||||||||| | ||||||||||| ||||| | ||| ||||||||| ||  ||||| |||||||||||||||||||||||||    
T  5640270 actcaaccgcatggtttagtttggtttgtgattttcattttaccaaccaaaccataccaaaccaaactgcaacataagaaaaatgttaattaaacatatc 5640369  T
Q  158 tcacgtagaccaatatttata 178  Q
    |||| || ||| ||| |||||    
T  5640370 tcacctaaaccgatacttata 5640390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 234
Target Start/End: Complemental strand, 26758762 - 26758591
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||| | |||||||||||    | ||| | ||||||||   |||| ||| |||| |    
T  26758762 actcaaccgcatgatttggttcggtttgcggttttgattttaccaaccaaaccaaaccaaac----cgcaatataagaaaaacactaataaaatatatat 26758667  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattctt 234  Q
    ||| |  |||||||   ||| ||| |||||||||||||| || ||||||||||| |||||||||||| || |||||    
T  26758666 cacttgaaccaatacccatagaaactcaatgaaaactttaatcaaatgacatattttttctcttgttaagtttctt 26758591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 38651586 - 38651685
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caac--agaagaaaaatgttaattaaacatat 156  Q
    |||||||||||| |||| ||||||||||||||||||||||| |||| || ||||||||||||| ||| ||||  | || |||||||||||||||||||||    
T  38651586 ctcaaccgcatggtttgatttggtttgcggttttcattttaccaactgaaccaaaccaaaccaaaccgcaacataaaaaaaaaatgttaattaaacatat 38651685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 8557323 - 8557460
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctc 159  Q
    |||||||||||| |||||||||||||| | ||||||||||| |||||     |||||||||| ||    ||| |||||||||||| ||||||||||||||    
T  8557323 ctcaaccgcatggtttggtttggtttgtgattttcattttaccaacc-----aaaccaaaccgca----acataagaaaaatgttgattaaacatatctc 8557413  T
Q  160 acgtagaccaatatttatataaattcaatgaaaacttttataaaatga 207  Q
    || |||||||||| | ||| ||| |||||| ||||  |||||||||||    
T  8557414 acctagaccaatactgatagaaactcaatggaaac-cttataaaatga 8557460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 37045796 - 37045690
Alignment:
Q  112 aaaccaaaccacaccc-aacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacat 210  Q
    ||||||||||| |||  |||| |||||||||||||||||||||||| |||   ||||||||| | ||| ||| ||||||||||||||||||||||| |||    
T  37045796 aaaccaaaccaaaccataacataagaaaaatgttaattaaacatatgtcatcaagaccaatactcatagaaactcaatgaaaacttttataaaatgtcat 37045697  T
Q  211 atatttt 217  Q
    || ||||    
T  37045696 atttttt 37045690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 55467127 - 55467365
Alignment:
Q  2 aaattgaaaccgcaaaaaattacatttggttcggatgtaatcagatcannnnnnnnnactcaaccgcatgatttggtttggtttgcggttttcattttat 101  Q
    |||||||||||||||||||   ||||||||| ||||||| ||||||||         ||||||||| ||| ||||||| ||||||| ||||| ||||||     
T  55467127 aaattgaaaccgcaaaaaaccgcatttggtttggatgtattcagatcaatttttt--actcaaccgtatggtttggttcggtttgcagttttgattttac 55467224  T
Q  102 caaccgacccaaaccaaaccacacc------caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaact 195  Q
     |||||| ||||||||||||| |||      ||| | ||||||||   ||| |||| |||| |||| |  ||||||| | ||| ||| ||||||||||||    
T  55467225 taaccgaaccaaaccaaaccaaaccaaacctcaatataagaaaaacactaactaaatatatatcacttgaaccaatactcatagaaactcaatgaaaact 55467324  T
Q  196 tttataaaatgacatatattttctcttgttcagattcttct 236  Q
    || |||||||||||| | |||||| ||||| || |||||||    
T  55467325 ttaataaaatgacatgttttttcttttgttaagtttcttct 55467365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 4280830 - 4280658
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| ||||||| ||||||||||||| |||||| ||||||| | ||  |||  || ||| || || ||||||||  || |||||||||||     
T  4280830 actcaaccgcatggtttggttcggtttgcggtttttattttaccaaccgaacaaagtcaagtcaaaccgcagcataagaaaaacattgattaaacatatg 4280731  T
Q  158 tcacgtagac-----caatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |||| |||||     || || | ||| ||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  4280730 tcacctagactagaccactaatcatagaaactcaatgaaaacttctataaaatgacatattttttctcttgtt 4280658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 48169201 - 48169049
Alignment:
Q  63 aaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctcacg 162  Q
    |||| |||| ||||||| |||||||||||||||||||| ||||| | |||||||||||  ||    | | |||||||||  |||| ||| |||| ||||     
T  48169201 aaccacatggtttggttcggtttgcggttttcattttaccaaccaaaccaaaccaaacagca----atataagaaaaatactaataaaatatatatcact 48169106  T
Q  163 tagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttct 219  Q
    |||||||||| | | | ||| | |||||||||||| |||||||||||||| ||||||    
T  48169105 tagaccaatactcaaagaaacttaatgaaaactttaataaaatgacatattttttct 48169049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 10481159 - 10481316
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc------caacagaagaaaaatgttaattaaac 152  Q
    ||||||||| ||| |||| |||| ||||||||||| |||||||||||||| ||||||||||||| |||      ||||| ||||||||   |||||||||    
T  10481159 actcaaccgtatggtttgatttgatttgcggtttttattttatcaaccgaaccaaaccaaaccaaaccaaaccgcaacataagaaaaactgtaattaaac 10481258  T
Q  153 atatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacat 210  Q
    ||||  ||| |||| ||||| ||||| ||| | |||| ||| || ||||||| |||||    
T  10481259 atatgccacctagatcaatacttatagaaacttaatggaaatttgtataaaaagacat 10481316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 222
Target Start/End: Complemental strand, 8355866 - 8355703
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    |||||||| |||| ||| ||| ||||||| ||||| ||||||||||||||  |||||||||||| ||| ||| | ||| |||   | ||||||| |||      
T  8355866 actcaaccacatggtttagttcggtttgcagttttgattttatcaaccgaatcaaaccaaaccaaaccgcaatataagtaaacact-aattaaatataca 8355768  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctctt 222  Q
    |||  |||||||||| | ||| ||||| |||||||||||| |||||||||||| | |||||||||    
T  8355767 tcatctagaccaatactcatagaaatttaatgaaaactttaataaaatgacattttttttctctt 8355703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 51661919 - 51662013
Alignment:
Q  61 tcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacat 154  Q
    ||||||||||| |||||||||||||||||||||  ||||| ||||||| |||| |||||||| ||| ||||| || |||||   |||||||||||    
T  51661919 tcaaccgcatggtttggtttggtttgcggtttttgttttaccaaccgaaccaacccaaaccaaaccgcaacataataaaaagactaattaaacat 51662013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 52632664 - 52632602
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacc 121  Q
    ||||||| ||||| ||||||||||||||||||||| |||||| ||||| | ||||||||||||    
T  52632664 actcaactgcatggtttggtttggtttgcggtttttattttaccaaccaaaccaaaccaaacc 52632602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 2565981 - 2566061
Alignment:
Q  163 tagaccaatatttatataaattcaatgaaaacttttataaaatgacata-tattttctcttgttcagattcttctctgctt 242  Q
    |||||||||||||||| |||||||||| ||||||| || |||||||||| | |||||| ||||| || ||||||| |||||    
T  2565981 tagaccaatatttatagaaattcaatggaaactttaatgaaatgacatatttttttcttttgttaagtttcttctttgctt 2566061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 2832037 - 2832108
Alignment:
Q  165 gaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||||||| | ||| ||| |||||| |||||||||||||||||||| | |||||||||||| || |||||||    
T  2832037 gaccaatactcataaaaactcaatgtaaacttttataaaatgacattttttttctcttgttaagtttcttct 2832108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 25918798 - 25918949
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacc-acacccaacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||| ||||| ||| ||| ||||||||||||| |||||| |||| || |||||||||||| | || ||| | ||||||||     |||||| ||||     
T  25918798 actcaactgcatggttttgttcggtttgcggttttgattttaccaactgaaccaaaccaaaccaaaacgcaatataagaaaaacacggattaaatatata 25918897  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgaca 209  Q
     ||| | |||||||| ||||| ||| |||||| ||||||| |||||||||||    
T  25918898 ccacctcgaccaatacttatagaaactcaatggaaactttaataaaatgaca 25918949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 153
Target Start/End: Complemental strand, 4555156 - 4555062
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaaca 153  Q
    ||||||||||   ||| ||||| |||||||||||||||||| ||  ||| ||||||| || || ||| ||||| |||||||||||||||||||||    
T  4555156 ctcaaccgcactgtttagtttgatttgcggttttcattttaccagtcgaaccaaaccgaatcaaaccgcaacataagaaaaatgttaattaaaca 4555062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 17144362 - 17144444
Alignment:
Q  143 ttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |||||||||||||| | || |||| ||||| | | | |||||||||| ||||||||||||||| |||||| ||||| ||||||    
T  17144362 ttaattaaacatatgttacctagatcaataataaaaaaaattcaatggaaacttttataaaataacatattttttcacttgtt 17144444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 20846943 - 20846846
Alignment:
Q  127 caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgt 224  Q
    ||||| ||||||||  ||||||| |  ||| |||| ||||| |||| | ||||||  ||||  ||||||||||||||||||||||| |||||||||||    
T  20846943 caacataagaaaaactttaattacatctatatcacctagactaatactcatataagctcaacaaaaacttttataaaatgacatattttttctcttgt 20846846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 38681631 - 38681587
Alignment:
Q  180 aaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||    
T  38681631 aaattcaatgaaaacttttataaaatgacata-attttcacttgtt 38681587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 45914761 - 45914802
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcatttta 100  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  45914761 actcaaccgcatggtttggtttggtttgcggttttgatttta 45914802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 210
Target Start/End: Original strand, 46252992 - 46253148
Alignment:
Q  61 tcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaa------aca 153  Q
    ||||||| ||| ||||||| ||||||||||||| ||||||  ||||||  |||||||||||| ||| ||| | ||||||||   |||||||      | |    
T  46252992 tcaaccgtatggtttggttcggtttgcggttttaattttactaaccgaagcaaaccaaaccaaaccgcaatataagaaaaacactaattaaatatatata 46253091  T
Q  154 tatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacat 210  Q
    ||| |||| | |||||||| | ||| ||| |||||||||||||| ||||||||||||    
T  46253092 tatatcacttggaccaatactcatagaaactcaatgaaaactttaataaaatgacat 46253148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 17144288 - 17144335
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaacc 106  Q
    ||||||||  ||| ||||||||||||||||||||| ||||||||||||    
T  17144288 actcaaccatatggtttggtttggtttgcggtttttattttatcaacc 17144335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 38651692 - 38651741
Alignment:
Q  176 atataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    ||| ||| |||||| ||||||||||||||| |||||| ||||||||||||    
T  38651692 atagaaactcaatggaaacttttataaaattacatattttttctcttgtt 38651741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 4764108 - 4764068
Alignment:
Q  195 ttttataaaatgacatatattttctcttgttcagattcttc 235  Q
    |||||||||||||||||| |||||||||||| || ||||||    
T  4764108 ttttataaaatgacatattttttctcttgttaagtttcttc 4764068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 45629644 - 45629552
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||||||| |||| |||| | |||||||| | ||| || ||||| | ||||||| |||||||||||||| |||| | ||||| || |||||||    
T  45629644 taattaaatatatatcacttggaccaatactcatagaatttcaacggaaactttaataaaatgacatattttttattttgttaagtttcttct 45629552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 524414 - 524597
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatct 158  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| ||||| || ||||||  ||||||||  ||| |    
T  524414 ctcaaccgcatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccgcaacataaaaaaaattctaattaaatctatgt 524513  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    ||| ||||||| || | ||| ||| |||||| ||||||||||||||| |||||| |||||| ||||| || ||||||| |||||    
T  524514 cacctagaccagtactcatagaaactcaatggaaacttttataaaataacatattttttctattgttaagtttcttctttgctt 524597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 217
Target Start/End: Complemental strand, 40849396 - 40849237
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| ||||| ||||| ||   ||||||||  |||     
T  40849396 actcaaccgcatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccgcaacataagaacaactctaattaaatctatg 40849297  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatatttt 217  Q
    |||   ||||||||| | ||| ||| |||||| |||||||||||||| ||||||| ||||    
T  40849296 tcatcgagaccaatactcatagaaactcaatggaaacttttataaaacgacatatttttt 40849237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 30079152 - 30079250
Alignment:
Q  75 tggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaata 172  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||| ||| ||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  30079152 tggtttggtttgcggttttcagtttagcaaccgaaccaaaccaaaccaaaccgcaacataagaaaaatgttaattaaatatatctcacctagaccaata 30079250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 27456856 - 27456687
Alignment:
Q  63 aaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctcacg 162  Q
    ||||||||  |||| ||||||||||||||||||||||  ||||||| |||||||||||| ||    ||| ||||||||   ||||||||  ||| || |     
T  27456856 aaccgcatagtttgctttggtttgcggttttcattttcccaaccgaaccaaaccaaaccgca----acataagaaaaacactaattaaatctatgtctcc 27456761  T
Q  163 tagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||||||||| | ||| ||| ||||||||||||||| ||||||||||||| |||||||||||| || |||||||    
T  27456760 tagaccaatactcatagaaactcaatgaaaacttttgtaaaatgacatattttttctcttgttaagtttcttct 27456687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 225
Target Start/End: Complemental strand, 48643363 - 48643157
Alignment:
Q  7 gaaaccgcaaaaaattacatttggttcggatgtaatcagatcannnnnnnnnactcaaccgcatgatttggtttggtttgcggttttcattttatcaacc 106  Q
    |||||||||||||||| |||||||||| ||||||||  |||||          ||||||| |||  ||||||||||||||| |||| ||||||| ||||     
T  48643363 gaaaccgcaaaaaattgcatttggttcagatgtaattggatcattttcttg--ctcaaccacatagtttggtttggtttgcagtttacattttaccaact 48643266  T
Q  107 gacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatg 206  Q
    || |||||||          ||||| ||||||||||||||||||||||||||||| || ||||||| | ||| ||| ||||||||||| |||||||||||    
T  48643265 gaaccaaaccg---------caacataagaaaaatgttaattaaacatatctcacctataccaatactcatagaaactcaatgaaaac-tttataaaatg 48643176  T
Q  207 acatatattttctcttgtt 225  Q
    |||||| ||||||||||||    
T  48643175 acatattttttctcttgtt 48643157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 225
Target Start/End: Original strand, 8117841 - 8117993
Alignment:
Q  73 tttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaat 171  Q
    ||||||||||||||| |||||||||||| ||||| | |||||||||| || ||| ||||| |||||||| |||||||||| || | |||| || ||||||    
T  8117841 tttggtttggtttgcagttttcattttaccaaccaaaccaaaccaaatcaaaccgcaacataagaaaaacgttaattaaaaatgtatcacctaaaccaat 8117940  T
Q  172 atttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    | | ||||||| |||||| ||||| ||||||||||| |||| |||||| |||||    
T  8117941 actcatataaactcaatggaaactcttataaaatga-atattttttcttttgtt 8117993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 27100153 - 27100331
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    ||||||||| ||| ||||||||||||||||||||| |||||| ||||| | |||||||||||| ||    | | ||||||||   |  ||||| |||| |    
T  27100153 actcaaccgtatggtttggtttggtttgcggttttgattttaccaaccaaaccaaaccaaaccgca----atataagaaaaacactctttaaatatatat 27100248  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    ||| || ||||||| |||||||||||||||||||||||| |||||||||| | | |||| ||||||| || ||||||| |||||    
T  27100249 cacttataccaatacttatataaattcaatgaaaactttaataaaatgac-ttttttttttcttgttaagtttcttctttgctt 27100331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 27178150 - 27177972
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    ||||||||| ||| ||||||||||||||||||||| |||||| ||||| | |||||||||||| ||    | | ||||||||   |  ||||| |||| |    
T  27178150 actcaaccgtatggtttggtttggtttgcggttttgattttaccaaccaaaccaaaccaaaccgca----atataagaaaaacactctttaaatatatat 27178055  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    ||| || ||||||| |||||||||||||||||||||||| |||||||||| | | |||| ||||||| || ||||||| |||||    
T  27178054 cacttataccaatacttatataaattcaatgaaaactttaataaaatgac-ttttttttttcttgttaagtttcttctttgctt 27177972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 235
Target Start/End: Complemental strand, 11399657 - 11399482
Alignment:
Q  61 tcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaaca-tatct 158  Q
    ||||||||||| |||| |||||||||||||||||||||||  |||||| |||||| |||||| ||| || || || |||||   ||||||||   ||| |    
T  11399657 tcaaccgcatggtttgatttggtttgcggttttcattttactaaccgaaccaaac-aaaccaaaccgcagcataataaaaacactaattaaaatctatgt 11399559  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttc 235  Q
    ||| |||||||||| |  || |||||||||| |||||||||||||||||||||| || ||||||||| || ||||||    
T  11399558 cacctagaccaataatcttagaaattcaatggaaacttttataaaatgacatattttgtctcttgttaagtttcttc 11399482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 37376300 - 37376194
Alignment:
Q  61 tcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc------caacagaagaaaaatgttaattaaacat 154  Q
    ||||| ||||| |||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||      ||||| ||||||||||||||||||| ||    
T  37376300 tcaactgcatggtttgatttggtttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccaaacagcaacataagaaaaatgttaattaaatat 37376201  T
Q  155 atctcac 161  Q
    |||||||    
T  37376200 atctcac 37376194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 236
Target Start/End: Original strand, 6879662 - 6879820
Alignment:
Q  79 ttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttat 177  Q
    |||||||| | |||| |||||| ||| ||| | ||||||||||| ||  ||||  |||||||||  ||||||||||||| |||| ||||| |||| | ||    
T  6879662 ttggtttgtgatttttattttaccaatcgaactaaaccaaaccaaactacaacttaagaaaaatactaattaaacatatatcacctagactaatactcat 6879761  T
Q  178 ataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    | ||  |||||||||||||| |||||||||||||| |||||||||||| || |||||||    
T  6879762 agaagctcaatgaaaactttaataaaatgacatattttttctcttgttaagtttcttct 6879820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 29628747 - 29628606
Alignment:
Q  63 aaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcac 161  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||| ||||| ||||||||   ||||||||  ||| ||||    
T  29628747 aaccgcatggtttggtttggtttgcgattttcattttaccaaccgaaccaaaccaaaccaaaccgcaacataagaaaaacactaattaaagctatgtcac 29628648  T
Q  162 gtagaccaatatttatataaattcaatgaaaacttttataaa 203  Q
     || || || | | ||| ||| |||||| |||||||||||||    
T  29628647 ctacacaaacactgatagaaactcaatggaaacttttataaa 29628606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 221
Target Start/End: Complemental strand, 30855628 - 30855470
Alignment:
Q  61 tcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctca 160  Q
    |||||| |||| |||||||||||||||||||||||||||| ||||| | |||||| |||   | |  |||| ||||||||| || ||||||||||| |||    
T  30855628 tcaaccacatggtttggtttggtttgcggttttcattttaccaaccaaaccaaactaaa--gcgcgtaacataagaaaaatattgattaaacatatgtca 30855531  T
Q  161 cgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctct 221  Q
    | || ||||||| | ||| ||| || | |||||  ||||||||||||||||| ||||||||    
T  30855530 cctacaccaatactcataaaaactctacgaaaatatttataaaatgacatattttttctct 30855470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 234
Target Start/End: Complemental strand, 22299068 - 22298893
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||| ||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||  ||  || | ||||||||   |||||||| || |     
T  22299068 actcaacagcatgatttggttcggtttgcggttttgattttaccaaccgaaccaaaccaaaccaatccgtaatataagaaaaacactaattaaatatcta 22298969  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattctt 234  Q
    |||  || | ||||| | ||| |||||||||||||||||| | ||||||||| || |||||||||||| || |||||    
T  22298968 tcatctaaatcaatactcatagaaattcaatgaaaactttaacaaaatgaca-attttttctcttgttaagtttctt 22298893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 7697834 - 7697651
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatg-ttaattaaacatat 156  Q
    ||||||| ||||| |||| | || ||||||||||| |||||| ||||||| ||||||||||||| ||| ||| | ||||||||   ||||||||| ||||    
T  7697834 actcaactgcatggtttgatctgatttgcggttttgattttaccaaccgaaccaaaccaaaccaaaccacaatataagaaaaacacttaattaaatatat 7697735  T
Q  157 ctcacgta----gaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
     |||| ||    |||||||| | ||| ||| |||||||||||||| |||||| ||||||| |||||| ||||| || |||||||    
T  7697734 atcacatacatagaccaatactcatagaaactcaatgaaaactttaataaaaagacatattttttctattgttaagtttcttct 7697651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 16535383 - 16535471
Alignment:
Q  148 taaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||||||||| |||| |||||||||| ||||| ||| |||||| |||||||| ||||||||||||| |||||||||| | || |||||||    
T  16535383 taaacatatgtcacctagaccaatacttatagaaactcaatggaaacttttttaaaatgacatattttttctcttgataagtttcttct 16535471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 16630279 - 16630191
Alignment:
Q  148 taaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||||||||| |||| |||||||||| ||||| ||| |||||| |||||||| ||||||||||||| |||||||||| | || |||||||    
T  16630279 taaacatatgtcacctagaccaatacttatagaaactcaatggaaacttttttaaaatgacatattttttctcttgataagtttcttct 16630191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 242
Target Start/End: Complemental strand, 1812912 - 1812833
Alignment:
Q  163 tagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    |||||||||| | ||| |||||||||||||| ||| |||||||||||||| |||||||||||| || ||||||| |||||    
T  1812912 tagaccaatactcatagaaattcaatgaaaattttaataaaatgacatattttttctcttgttgagtttcttctttgctt 1812833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 20335044 - 20334963
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    ||||||||  ||| |||| |||||||||| | ||| |||||||||||||||||| ||||| |||||||| ||||||||||||    
T  20335044 taattaaatgtatatcacctagaccaatactcatagaaattcaatgaaaactttaataaattgacatattttttctcttgtt 20334963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 211
Target Start/End: Original strand, 8568095 - 8568247
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatct 158  Q
    |||||||| ||| ||| | ||||||||||||||  |||||| || |||| ||||||||||||| ||| ||| | ||||||||   |||||||| |||| |    
T  8568095 ctcaaccgaatggttttgcttggtttgcggtttaaattttaccagccgaaccaaaccaaaccaaaccgcaatataagaaaaacactaattaaatatatat 8568194  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacata 211  Q
    ||   ||||||||  | ||| |||||||||| ||||||| |||||||||||||    
T  8568195 catcaagaccaatgctcatagaaattcaatggaaactttaataaaatgacata 8568247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 31287322 - 31287382
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaa 119  Q
    ||||||||||||| ||||||| ||||||||||||| |||||| ||||||| ||||||||||    
T  31287322 actcaaccgcatggtttggttcggtttgcggttttaattttaccaaccgaaccaaaccaaa 31287382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 43202942 - 43202774
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    |||||| |||||| |||||||||||||| |||||| |||||| |||||     |||||||||||||    ||| || | |||   ||||||||  ||| |    
T  43202942 actcaatcgcatggtttggtttggtttgtggtttttattttaccaacc-----aaaccaaaccaca----acataatacaaacactaattaaatctatgt 43202852  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||  |||||||||| |  |||||| |||||||||||||||||| ||| |||||| |||||||||||| || |||||||    
T  43202851 catctagaccaatactcgtataaactcaatgaaaacttttatataataacatattttttctcttgttaagtttcttct 43202774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 2734809 - 2734686
Alignment:
Q  113 aaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacata 211  Q
    |||||||||| ||| ||||| |||||||||  ||||||||  ||| |||  |||||||||| | ||| ||| |||||||| |||||||||||||||||||    
T  2734809 aaccaaaccaaaccacaacacaagaaaaatcctaattaaatctatgtcatctagaccaatactcatagaaactcaatgaatacttttataaaatgacata 2734710  T
Q  212 -tattttctcttgttcagattctt 234  Q
     | |||||||||||| || |||||    
T  2734709 tttttttctcttgttaagtttctt 2734686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 29211248 - 29211338
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||||||||  ||| |||| |||||||||||| ||| ||| |||||||||||||||||||||||  ||||  ||||||||||| || |||||||    
T  29211248 taattaaatctatgtcacctagaccaatattcatagaaactcaatgaaaacttttataaaatg--atattgtttctcttgttaagtttcttct 29211338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 236
Target Start/End: Complemental strand, 36550932 - 36550824
Alignment:
Q  128 aacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttca 227  Q
    |||| |||||||| ||||||| ||| ||| || | |||| ||||||| ||| ||  |||||  ||| |||||||||||||||||| |||||||||||| |    
T  36550932 aacataagaaaaacgttaattgaacttatgtcgcttagatcaatattcatagaagctcaattgaaatttttataaaatgacatattttttctcttgttaa 36550833  T
Q  228 gattcttct 236  Q
    | |||||||    
T  36550832 gcttcttct 36550824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 21237438 - 21237492
Alignment:
Q  180 aaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattctt 234  Q
    |||||||||| |||||||||||||||||||||||||| || ||||| || |||||    
T  21237438 aaattcaatggaaacttttataaaatgacatatatttccttttgttaagtttctt 21237492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 31011310 - 31011487
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    |||||||||| || ||||||  |||||| |||||| |||||| ||||| | | |||||||||| ||    ||| ||||||||   ||||||||||||| |    
T  31011310 actcaaccgcgtggtttggtgcggtttgaggtttttattttaccaaccaaacgaaaccaaaccgca----acataagaaaaacactaattaaacatatgt 31011405  T
Q  159 cacgtagaccaatatttata-----taaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |   |||||||||||| |||     |||| |||||| ||||||||||||||| | |||| |||||||||||| || |||||||    
T  31011406 cgtctagaccaatattcatagaaactaaactcaatggaaacttttataaaataagatat-ttttctcttgttaagtttcttct 31011487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 35495893 - 35495760
Alignment:
Q  111 caaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgaca 209  Q
    |||||||||||| ||| ||| | ||||||||   ||||||||||||| |||| |||| ||||| || || ||  |||||| ||||||||||||||  |||    
T  35495893 caaaccaaaccaaaccgcaatataagaaaaacactaattaaacatatgtcacctagatcaatacttttagaatctcaatggaaacttttataaaacaaca 35495794  T
Q  210 ta-tattttctcttgttcagattcttctctgctt 242  Q
    || | |||||||||||| || ||||||| |||||    
T  35495793 tatttttttctcttgttaagtttcttctttgctt 35495760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 35819659 - 35819712
Alignment:
Q  67 gcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaac 120  Q
    ||||||||| ||||||||||||||||| |||||| ||| ||| |||||||||||    
T  35819659 gcatgattttgtttggtttgcggttttgattttaccaatcgaaccaaaccaaac 35819712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 26208941 - 26208992
Alignment:
Q  166 accaatatttatataaattcaatgaaaacttttataaaatgacatatatttt 217  Q
    ||||||| | ||| ||| |||| |||||||||||||||||||||||||||||    
T  26208941 accaatactcatagaaaatcaacgaaaacttttataaaatgacatatatttt 26208992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 46147735 - 46147680
Alignment:
Q  66 cgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacc 121  Q
    |||||| ||| |||||| ||||||||||||||||| ||||| | ||||||||||||    
T  46147735 cgcatggtttagtttggattgcggttttcattttaccaaccaaaccaaaccaaacc 46147680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 27214859 - 27214920
Alignment:
Q  180 aaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    |||||||||| ||||||||||||| ||||||||||| ||| ||||| || ||||||| |||||    
T  27214859 aaattcaatggaaacttttataaa-tgacatatattatcttttgttaagtttcttctttgctt 27214920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 47646406 - 47646484
Alignment:
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||| |||||||||| | ||| ||| || ||| ||| ||| |||||||||||||| |||||||||||| || |||||||    
T  47646406 tcacctagaccaatactcatagaaactcgatggaaattttaataaaatgacatattttttctcttgttaagtttcttct 47646484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 10338028 - 10338140
Alignment:
Q  8 aaaccgcaaaaaattacatttggttcggatgtaatcagatcannnnnnnnnactcaaccgcatgatttggtttggtttgcggttttcattttatcaaccg 107  Q
    |||| ||||||||  |||||||||||||||||| || |||||          |||||||||||| ||||||| | |||| |||||| |||||| ||||||    
T  10338028 aaactgcaaaaaacaacatttggttcggatgtattcggatcatttttttttgctcaaccgcatggtttggttcgatttgtggttttgattttaccaaccg 10338127  T
Q  108 acccaaaccaaac 120  Q
    | | |||||||||    
T  10338128 aactaaaccaaac 10338140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 23033163 - 23033051
Alignment:
Q  113 aaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacata 211  Q
    |||||||||| ||| ||||| ||||||||  ||||||||||||||  ||| |||| ||||| | ||| ||| |||| | ||||| ||| ||||||| |||    
T  23033163 aaccaaaccaaaccgcaacataagaaaaactttaattaaacatatgacac-tagatcaatactcatagaaactcaacggaaactcttacaaaatgaaata 23033065  T
Q  212 tattttctcttgtt 225  Q
    | ||||||||||||    
T  23033064 ttttttctcttgtt 23033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 24477886 - 24477841
Alignment:
Q  61 tcaaccgcatgatttggtttggtttgcggttttcattttatcaacc 106  Q
    |||||| ||||||||||||||||||| |||||| |||||| |||||    
T  24477886 tcaaccacatgatttggtttggtttgtggtttttattttagcaacc 24477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 33435430 - 33435341
Alignment:
Q  147 ttaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||||||||| |||  || || || ||| ||| ||| ||||||  ||||||||||||||||||| | |||||||||||| || |||||||    
T  33435430 ttaaacatatgtcatctatactaaaattcatagaaactcaatgtgaacttttataaaatgacatgttttttctcttgttaagtttcttct 33435341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 60 - 210
Target Start/End: Original strand, 11072917 - 11073068
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatct 158  Q
    |||||||||||| ||||| |||||||| ||||||||||||| ||||||  ||  ||||||||| ||| ||||| |||||||||||||| |||||||||||    
T  11072917 ctcaaccgcatggtttggcttggtttgaggttttcattttaccaaccgcaccgcaccaaaccaaaccgcaacataagaaaaatgttaaataaacatatct 11073016  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacat 210  Q
    ||| || ||||||| ||||| ||| ||||| |||||||||||||||||||||    
T  11073017 cacctaaaccaatacttatagaaactcaataaaaacttttataaaatgacat 11073068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 44056271 - 44056104
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| |||||||  ||||||||||||||||||| |||| || ||||||||||||| ||  ||||| ||||||||| || |||||||||||     
T  44056271 actcaaccgcatggtttggttatgtttgcggttttcattttaccaactgaaccaaaccaaaccaaactgcaacataagaaaaatattgattaaacatatg 44056172  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |||| |||||||||| | ||||||| ||||||||   ||||||||||||| |||| ||||||||||||    
T  44056171 tcacttagaccaatactcatataaactcaatgaatttttttataaaatgatatattttttctcttgtt 44056104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 8269155 - 8269005
Alignment:
Q  87 cggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattc 185  Q
    ||||||| |||||||||||||| ||||||||||  | ||| ||||| ||||||||  ||||||||| |||| |||  |||||||||||||||||||| ||    
T  8269155 cggtttttattttatcaaccgaaccaaaccaaataaaaccgcaacacaagaaaaacattaattaaatatatatcatctagaccaatatttatataaactc 8269056  T
Q  186 aatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||| ||||||||||||||||||||||||||||| ||||| || |||||||    
T  8269055 aatggaaacttttataaaatgacatatattttcttttgttaagtttcttct 8269005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 18310504 - 18310320
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    |||||||| |||| |||||||||||| | |||||| |||||||||| ||| ||||||||||||| ||| |||||  ||||| |   |||||||||||||     
T  18310504 actcaaccacatggtttggtttggttagtggtttttattttatcaaacgaaccaaaccaaaccaaaccgcaacattagaaatacactaattaaacatatg 18310405  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    |||  || ||||||| ||||| ||||||||||||||||||||||||||||||| | |||||||||| | || ||||||| |||||    
T  18310404 tcatttaaaccaatacttatagaaattcaatgaaaacttttataaaatgacatgttttttctcttgataagtttcttctttgctt 18310320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 18834106 - 18834271
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||| ||||  |||| ||||||||| |||||| |||||| ||||||| ||||| ||||||| ||| ||||| ||||||||   |||||||| ||||     
T  18834106 actcaactgcatattttgatttggtttgaggtttttattttaccaaccgaaccaaatcaaaccaaaccacaacataagaaaaacactaattaaatatatg 18834205  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttg 223  Q
    |||| |||||||||| | ||| ||| ||||||||||||||||||||||||||||| ||||||||||    
T  18834206 tcacctagaccaatactaataaaaactcaatgaaaacttttataaaatgacatattttttctcttg 18834271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 36202993 - 36203178
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaatt-aaacatat 156  Q
    ||||||||||||| ||||||||||||||||| |||||||||| ||||||| ||| ||||||||| ||| ||||| || |||||   ||||| |||  |||    
T  36202993 actcaaccgcatggtttggtttggtttgcggctttcattttaccaaccgaaccataccaaaccaaaccgcaacataataaaaacactaattaaaatctat 36203092  T
Q  157 ctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
     |||| |||||||||| | ||| ||| |||||| |||||||||||||||||||||| | |||||||||| || ||||||| |||||    
T  36203093 gtcacctagaccaatactaatagaaactcaatggaaacttttataaaatgacatatttgttctcttgttaagtttcttctttgctt 36203178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 242
Target Start/End: Complemental strand, 6248603 - 6248427
Alignment:
Q  62 caaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctcac 161  Q
    |||||||||| ||||||| ||||||||||||| |||||| ||||||| |||||||||||| ||    | | ||||||||   |||||||| |||| ||||    
T  6248603 caaccgcatggtttggttcggtttgcggttttgattttaccaaccgaaccaaaccaaaccgca----atataagaaaaacactaattaaatatatatcac 6248508  T
Q  162 gtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
     |||||||||| | ||| |||||||||| ||||||| |||||||||||||| ||| |||||||| || ||||||| |||||    
T  6248507 ttagaccaatactcatagaaattcaatggaaactttaataaaatgacatatttttcctcttgttaagtttcttctttgctt 6248427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 225
Target Start/End: Original strand, 32909917 - 32910082
Alignment:
Q  61 tcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctc 159  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||| ||| |  || ||||||| ||| ||||| ||||||||||||||||||| |||||||    
T  32909917 tcaaccgcatggtttggtttggtttgtggttttcattttaccaatcgaacagaatcaaaccaaaccgcaacataagaaaaatgttaattaaatatatctc 32910016  T
Q  160 acgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    || |||| ||||| | ||| ||| | ||||||||||||||||||| |||  ||  |||||||||||    
T  32910017 acctagatcaataatcatagaaacttaatgaaaacttttataaaacgacgcattctttctcttgtt 32910082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 210
Target Start/End: Original strand, 8165098 - 8165241
Alignment:
Q  73 tttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc------caacagaagaaaaatgttaattaaacatatctcacgtaga 166  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||||||| |||      ||||| || ||||||||||||||||||||| |||| ||||    
T  8165098 tttggtttagtttgtggttttcattttatcaaccgaaccaaaccaaaccaaaccaaaccgcaacataataaaaatgttaattaaacatatgtcacctaga 8165197  T
Q  167 ccaatatttatataaattcaatgaaaacttttataaaatgacat 210  Q
     ||||| | ||||||| |||||||||  ||||||||||||||||    
T  8165198 tcaatactcatataaactcaatgaaattttttataaaatgacat 8165241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 218
Target Start/End: Complemental strand, 35375701 - 35375545
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||| | |||||||||||  |   ||||| ||||||||  ||||||||||||||      
T  35375701 actcaaccgcatggttttgtttggtttgcggtttttattttaccaacctaaccaaaccaaactgc---caacataagaaaaacattaattaaacatatgc 35375605  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttc 218  Q
    ||  | |||||||| ||||| ||| |||||| |||||||||||||||||||||| |||||    
T  35375604 catcttgaccaatacttatagaaactcaatggaaacttttataaaatgacatattttttc 35375545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 236
Target Start/End: Original strand, 52380299 - 52380457
Alignment:
Q  81 ggtttgcggttttcattttatcaaccgacccaaaccaaaccaca-cccaacagaagaaaaatgttaattaa--acatatctcacgtagaccaatatttat 177  Q
    |||||||| |||| |||||| ||||||| ||||||||||| | | ||||| | ||||||||   |||||||  | |||| |||| |||||||||| ||||    
T  52380299 ggtttgcgattttgattttaccaaccgaaccaaaccaaactaaaccccaatataagaaaaacactaattaaatatatatatcacctagaccaatacttat 52380398  T
Q  178 ataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    | ||||||||| |||||||| |||||||||||||| |||||||||||| || |||||||    
T  52380399 agaaattcaataaaaactttaataaaatgacatattttttctcttgttaagtttcttct 52380457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 27507057 - 27507241
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| ||||||| ||||||||||||| |||||| |||| || ||||||||||||| ||| ||| | ||||||||   |||||||| ||||     
T  27507057 actcaaccgcatgctttggttcggtttgcggttttgattttaccaactgaaccaaaccaaaccaaaccgcaatataagaaaaacactaattaaatatata 27507156  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    |||  |||| | ||| | ||| |||||||||  |||||||  ||||||||||| | |||||||||||| ||  |||||| |||||    
T  27507157 tcatctagatcgatactcatagaaattcaattgaaactttagtaaaatgacattttttttctcttgttaagtctcttctttgctt 27507241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 9330867 - 9330752
Alignment:
Q  127 caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttc 226  Q
    ||||| ||||||||  |||||||||||||| |||| |||||||||| | ||| ||| |||||||||||||||||||||||| |||| |||||| |||||     
T  9330867 caacataagaaaaacattaattaaacatatgtcacctagaccaatactcatagaaactcaatgaaaacttttataaaatgatatattttttcttttgtta 9330768  T
Q  227 agattcttctctgctt 242  Q
    || || |||| |||||    
T  9330767 agtttgttctttgctt 9330752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 6693653 - 6693824
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    |||||| |||||| ||||||| |||||| |||||| |||||||||||| | |||||||||||| ||    | | ||||||||   |||||||| |||| |    
T  6693653 actcaatcgcatggtttggttaggtttgtggttttaattttatcaaccaaaccaaaccaaaccgca----atataagaaaaacactaattaaatatatat 6693748  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||| | |||||||| | ||| ||| |||||||||||||| ||||||||||  || |||||||||||| || |||||||    
T  6693749 cacttggaccaatactcatagaaactcaatgaaaactttaataaaatgac--attttttctcttgttaagtttcttct 6693824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 25507404 - 25507262
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    |||||||||||  |||||||||||||||||||||| |||||| |||||     |||||||||||||    ||| ||||||||   |||||||| |||| |    
T  25507404 actcaaccgcacaatttggtttggtttgcggtttttattttaccaacc-----aaaccaaaccaca----acataagaaaaaaactaattaaatatatgt 25507314  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacat 210  Q
    | | ||  |||||||| ||| ||| |||||||||||||||||||||||||||    
T  25507313 ctcataatccaatattcatagaaactcaatgaaaacttttataaaatgacat 25507262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 35979831 - 35980003
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctc 159  Q
    |||||| ||||| |||||||||||||||||||||| ||||| |||||     |||||||||| ||    ||| ||||||||   ||||||||  ||| ||    
T  35979831 ctcaacagcatggtttggtttggtttgcggttttctttttaccaacc-----aaaccaaaccgca----acataagaaaaacactaattaaatctatgtc 35979921  T
Q  160 acgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    || ||||| |||| | ||| ||| |||||| ||||||||||||| |||||||| |||||||||||| || ||||||| |||||    
T  35979922 acctagacaaatactcatagaaactcaatggaaacttttataaa-tgacatattttttctcttgttaagtttcttctttgctt 35980003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 236
Target Start/End: Original strand, 35992144 - 35992320
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacac-ccaacagaagaaaaatgttaattaaacatatct 158  Q
    ||||| |||||| ||||||||||||||| |||||| ||||| ||||| | ||||||||||||| ||  ||||| ||||| ||   ||||||||  ||| |    
T  35992144 ctcaatcgcatggtttggtttggtttgcagttttctttttaccaaccaaaccaaaccaaaccaaactgcaacataagaagaacactaattaaatctatgt 35992243  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||| ||||| |||| | | | ||| | |||| |||||||||| ||||||||||| |||||||||||| || |||||||    
T  35992244 cacctagacaaatactcaaagaaacttaatggaaacttttat-aaatgacatattttttctcttgttaagtttcttct 35992320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 212
Target Start/End: Original strand, 26063762 - 26063911
Alignment:
Q  63 aaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcac 161  Q
    |||| |||| ||||||| ||||||  ||||| |||||| ||||||| |||||| |||||| ||| ||| | ||||||||  ||||||||| |||| ||||    
T  26063762 aaccacatggtttggttcggtttggagttttgattttaccaaccgaaccaaac-aaaccaaaccgcaatataagaaaaacattaattaaatatatatcac 26063860  T
Q  162 gtagaccaatatttatataaattcaatgaaaacttttataaaatgacatat 212  Q
     |||| ||||| | ||| ||| |||||||||||||| ||||||| ||||||    
T  26063861 ctagagcaatactcatagaaactcaatgaaaactttaataaaataacatat 26063911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 9249705 - 9249813
Alignment:
Q  127 caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttc 226  Q
    ||||| ||||||||  |||||||||||||| |||| |||||||||| | |  ||||   || |||||||||||||||||||||||| ||||||||||||     
T  9249705 caacataagaaaaacattaattaaacatatgtcacctagaccaatactcaattaaacataa-gaaaacttttataaaatgacatattttttctcttgtta 9249803  T
Q  227 agattcttct 236  Q
    || |||||||    
T  9249804 agtttcttct 9249813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 21685172 - 21685256
Alignment:
Q  133 aagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatatttt 217  Q
    ||||||||  |||||||||||||| |||| |||||||||| ||||| ||| |||||  | |||||||||||||||||||| ||||    
T  21685172 aagaaaaacattaattaaacatatgtcacctagaccaatacttatagaaactcaatagacacttttataaaatgacatatttttt 21685256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 40094730 - 40094895
Alignment:
Q  63 aaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctcacg 162  Q
    ||||||||||||||||| |||||||||||||||||||| |||||          ||||||||    | | ||||||||   |||||||| |||| ||||     
T  40094730 aaccgcatgatttggttcggtttgcggttttcattttaccaacc----------aaaccaca----atataagaaaaacactaattaaatatatatcact 40094815  T
Q  163 tagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    |  ||||||| | ||| ||| |||||||||||||| ||||||||||||||  ||||||||||| || ||||||| |||||    
T  40094816 tgaaccaatactcatagaaactcaatgaaaactttaataaaatgacatattatttctcttgttaagtttcttctttgctt 40094895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 16537384 - 16537430
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaacc 106  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||    
T  16537384 ctcaaccgcatgatttggtttggtttgcggtttttattttaccaacc 16537430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 17652264 - 17652202
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacca 122  Q
    |||||||||||| ||| ||||| |||| ||||||||||||| ||||||| |||||||||||||    
T  17652264 ctcaaccgcatggttttgtttgatttggggttttcattttaccaaccgaaccaaaccaaacca 17652202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 208
Target Start/End: Complemental strand, 17989577 - 17989432
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    |||||||| |||  ||||||||||||| |||| |||||||||     ||| |||||||| |||| ||| ||||| ||||||||  |||||||||  |||     
T  17989577 actcaaccacatagtttggtttggtttacggtattcatttta-----cgaaccaaaccataccagaccgcaacataagaaaaactttaattaaatctatg 17989483  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgac 208  Q
    |||| ||||||||||   ||| ||| |||||| ||||||||||||||||||    
T  17989482 tcacctagaccaatacacatagaaactcaatggaaacttttataaaatgac 17989432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 16063344 - 16063284
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaa 119  Q
    |||||||||||||||||||||  |||||||||||| |||||| ||||| | ||||||||||    
T  16063344 actcaaccgcatgatttggttcagtttgcggttttgattttaccaacccaaccaaaccaaa 16063284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 45949080 - 45949238
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||| ||||| | ||||||| ||||||||||| |||||| ||||||| ||||||||||| | ||| ||||     || ||| ||||| ||||||||     
T  45949080 actcaactgcatggtatggtttgatttgcggtttttattttaccaaccgaaccaaaccaaacaaaaccgcaac-----aagaatattaatcaaacatatg 45949174  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctctt 222  Q
    |||| |||||||||| | ||| |||||||||| ||| ||||| ||| |||| | | |||||||||    
T  45949175 tcacatagaccaatactcataaaaattcaatggaaa-ttttacaaactgactttttttttctctt 45949238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 23474752 - 23474815
Alignment:
Q  163 tagaccaatatttatataaattcaatgaaaactttt-ataaaatgacatatattttctcttgtt 225  Q
    |||||||||| | ||| |||||||||| |||||||| |||||||||||||| ||||||||||||    
T  23474752 tagaccaatactcatagaaattcaatggaaactttttataaaatgacatattttttctcttgtt 23474815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 217
Target Start/End: Original strand, 39157872 - 39158014
Alignment:
Q  77 gtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagacc-aatatt 174  Q
    |||||||||| |||||| |||||||||||||| |||||||||| || ||| ||||| |||| |||   ||||||||||| | |||| || ||| || | |    
T  39157872 gtttggtttgtggtttttattttatcaaccgaaccaaaccaaatcaaaccgcaacataagataaacactaattaaacatttgtcacctaaaccaaacact 39157971  T
Q  175 tatataaattcaatgaaaacttttataaaatgacatatatttt 217  Q
     | |||   ||||||| ||||||||||||||||||||| ||||    
T  39157972 cacatagcctcaatgataacttttataaaatgacatatttttt 39158014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 9961794 - 9961835
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcatttta 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  9961794 actcaaccgcatgatttggtttgatttgctgttttcatttta 9961835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 26344603 - 26344660
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaacc 116  Q
    ||||||||||||| ||||||| ||||||| ||||| |||||| ||||||| |||||||    
T  26344603 actcaaccgcatggtttggttcggtttgcagttttgattttaccaaccgaaccaaacc 26344660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 26344700 - 26344777
Alignment:
Q  165 gaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    |||||||| | ||| ||| | ||||| |||||| |||||||||||||| |||||||||||| || ||||||| |||||    
T  26344700 gaccaatactcatagaaactaaatgagaactttaataaaatgacatattttttctcttgttaagtttcttctttgctt 26344777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 19051521 - 19051481
Alignment:
Q  196 tttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  19051521 tttataaaatgacatatattttctcttgttcaatttcttct 19051481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 12974107 - 12974044
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacca 122  Q
    |||||||  |||| ||||||| ||||||| ||||| |||||| ||||||| |||||||||||||    
T  12974107 actcaacaacatggtttggttcggtttgctgttttgattttaccaaccgaaccaaaccaaacca 12974044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 10847077 - 10847139
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacc 121  Q
    ||||||||||||||||||||||  |||| |||||| |||||| || || | ||||||||||||    
T  10847077 actcaaccgcatgatttggtttaatttgtggtttttattttaccagcccaaccaaaccaaacc 10847139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 50471626 - 50471580
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaac 105  Q
    ||||||| ||||| ||||||| ||||||||||||| |||||||||||    
T  50471626 actcaactgcatggtttggttcggtttgcggttttgattttatcaac 50471580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 16537453 - 16537526
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatatttt 217  Q
    |||||||||||||   | ||||||||||| |  || ||| ||||||||||||||| ||||||||||||| ||||    
T  16537453 taattaaacatatgcaatgtagaccaatactcgtagaaagtcaatgaaaacttttgtaaaatgacatatttttt 16537526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 25533349 - 25533308
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcatttta 100  Q
    ||||||| |||||||||| || ||||||||||||||||||||    
T  25533349 actcaacagcatgatttgattcggtttgcggttttcatttta 25533308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 26397 - 26219
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatct 158  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| | ||| ||||| |||||||||  ||||      ||| |    
T  26397 ctcaaccgcatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaacaaaaccgcaacataagaaaaattctaat-----ctatgt 26303  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    ||| |||||||||| | ||| ||| |||||| |||||||||||||||||||||| |||||| ||||| || ||||||| |||||    
T  26302 cacctagaccaatactcatagaaactcaatggaaacttttataaaatgacatattttttctattgttaagtttcttctttgctt 26219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 15057 - 14995
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacc 121  Q
    ||||||||||||  ||||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  15057 actcaaccgcatagtttggtttggtctgcggttttcattttaccaaccgaaccaaaccaaacc 14995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 48338875 - 48338697
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatct 158  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| | ||| ||||| |||||||||  ||||      ||| |    
T  48338875 ctcaaccgcatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaacaaaaccgcaacataagaaaaattctaat-----ctatgt 48338781  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    ||| |||||||||| | ||| ||| |||||| |||||||||||||||||||||| |||||| ||||| || ||||||| |||||    
T  48338780 cacctagaccaatactcatagaaactcaatggaaacttttataaaatgacatattttttctattgttaagtttcttctttgctt 48338697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 46472008 - 46471797
Alignment:
Q  2 aaattgaaaccgcaaaaaattacatttggttcggatgtaatcagatcannnnnnnnnactcaaccgcatgatttggtttggtttgcggttttcattttat 101  Q
    |||| ||||||||||||||   ||||||||||||||||| || |||||         |||||||||||||||||||||||||||||||||||||||||||    
T  46472008 aaatcgaaaccgcaaaaaaccccatttggttcggatgtattcggatcactttttt--actcaaccgcatgatttggtttggtttgcggttttcattttat 46471911  T
Q  102 caaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttata 201  Q
         || |||||||||||||    ||||| ||||||||  |||||||||  ||| |||| |||||||||| ||||| ||| |||||| ||| |||||||    
T  46471910 -----gaaccaaaccaaacca----caacataagaaaaactttaattaaa-ttatgtcacctagaccaatacttataaaaactcaatggaaatttttata 46471821  T
Q  202 aaatgacatatattttctcttgtt 225  Q
    ||||||||||| ||||||||||||    
T  46471820 aaatgacatattttttctcttgtt 46471797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 236
Target Start/End: Complemental strand, 20986987 - 20986759
Alignment:
Q  7 gaaaccgcaaaaaattacatttggttcggatgtaatcagatcannnnnnnnnactcaaccgcatgatttggtttggtttgcggttttcattttatcaacc 106  Q
    |||||||||||||||  ||||||||||||||||| || |||||         ||||||||||||  |||||||||||||| | |||| ||||||  ||||    
T  20986987 gaaaccgcaaaaaatcgcatttggttcggatgtattcggatcaatttttt--actcaaccgcattgtttggtttggtttgggattttgattttactaacc 20986890  T
Q  107 gacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaat 205  Q
    || ||||||||||||| ||| ||| | ||||||||   |||||||| |||| |||| | |||||||| | ||||||| |||||  ||||||| |||||||    
T  20986889 gaaccaaaccaaaccaaaccgcaatataagaaaaacactaattaaatatatatcacttggaccaatactcatataaactcaatagaaactttaataaaat 20986790  T
Q  206 gacatatattttctcttgttcagattcttct 236  Q
    ||||||| |||||||||||| || |||||||    
T  20986789 gacatattttttctcttgttaagtttcttct 20986759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 154
Target Start/End: Complemental strand, 45983919 - 45983773
Alignment:
Q  7 gaaaccgcaaaaaattacatttggttcggatgtaatcagatcannnnnnnnnactcaaccgcatgatttggtttggtttgcggttttcattttatcaacc 106  Q
    ||||||||||||||| |||||||||||||||||||||  || |          ||||||| |||| |||||||||||||||||||||||||||| |||||    
T  45983919 gaaaccgcaaaaaatcacatttggttcggatgtaatcgaattattttcttg--ctcaaccacatggtttggtttggtttgcggttttcattttaccaacc 45983822  T
Q  107 gacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacat 154  Q
    ||  |||||||||||| ||| ||||| | ||||||||||||||||||||    
T  45983821 gaatcaaaccaaaccaaaccgcaacatatgaaaaatgttaattaaacat 45983773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 41325933 - 41325755
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||| ||||| ||||||| ||||||| ||||| |||||| ||||||| ||||||||||||| ||| ||| | ||||||||   |||||| | ||||     
T  41325933 actcaactgcatggtttggttcggtttgcagttttgattttaccaaccgaaccaaaccaaaccaaaccgcaatataagaaaaacactaattagatatata 41325834  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||| | |||||||| |   ||||| |||||| ||||||| |||||||||||||| |||||| ||||| || |||||||    
T  41325833 tcactttgaccaatactcgaataaactcaatggaaactttaataaaatgacatattttttcttttgttaagtttcttct 41325755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 21069595 - 21069410
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| ||| ||| |||||||| |||| |||||| ||||||| ||||||||||||| ||| | | | ||||||||   |||||||| ||||     
T  21069595 actcaaccgcatggttttgttcggtttgcg-ttttgattttaccaaccgaaccaaaccaaaccaaaccgcgatataagaaaaacactaattaaatatatg 21069497  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacata--tattttctcttgttcagattcttctctgctt 242  Q
    |||| || ||||||| |  |||||| | |||||||||||| |||||||||||||  | |||||||||||| || ||||||| |||||    
T  21069496 tcacttacaccaatactcgtataaacttaatgaaaactttaataaaatgacatatgttttttctcttgttaagtttcttctttgctt 21069410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 219
Target Start/End: Original strand, 32222860 - 32223020
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaac-atat 156  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |||   ||| || |||||||| ||| ||||| || |||||   ||||||||  ||||    
T  32222860 actcaaccgtatggtttggtttggtttgcggttttcatttta-caaattaccgaa-ccaaaccaaaccgcaacataataaaaacactaattaaaatatat 32222957  T
Q  157 ctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttct 219  Q
     |||| || ||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||    
T  32222958 gtcacctataccaatattcatataaactcaatgtaaacttttataaaatgacatattttttct 32223020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 1564606 - 1564772
Alignment:
Q  63 aaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc------caacagaagaaaaatgttaattaaacatat 156  Q
    ||||||||| ||||||| ||||||||||||| |||||| |||| || ||||||||||||| |||      ||| | ||||||||   |||||||| ||||    
T  1564606 aaccgcatggtttggttcggtttgcggttttgattttaccaactgaaccaaaccaaaccaaaccaaactgcaatataagaaaaacaataattaaatatat 1564705  T
Q  157 ctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
     |||  |||||||||| | |||||||||||| ||||||||| |||||||||||| | ||||||||||||    
T  1564706 atcatctagaccaatactcatataaattcaa-gaaaactttaataaaatgacat-ttttttctcttgtt 1564772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 8485216 - 8485064
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| ||||||  ||||||||||||| |||||| ||||||| | ||||||||||| ||| ||| | ||||||||   |||| ||| ||||     
T  8485216 actcaaccgcatggtttggtccggtttgcggttttgattttaccaaccgaactaaaccaaaccaaaccgcaatataagaaaaacactaatcaaatatata 8485117  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacat 210  Q
    ||   |||||||||| | ||| |||||||||| ||||||| ||||||||||||    
T  8485116 tcctctagaccaatactcatagaaattcaatgtaaactttaataaaatgacat 8485064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 3666683 - 3666798
Alignment:
Q  127 caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttc 226  Q
    ||||| ||||||||   ||||||||||||| | || ||||| |||||| ||| ||| |||||||||||||||||||||||| |||| ||||||||||||     
T  3666683 caacataagaaaaacaataattaaacatatgtaacttagactaatattcatagaaactcaatgaaaacttttataaaatgatatattttttctcttgtta 3666782  T
Q  227 agattcttctctgctt 242  Q
    || || |||| |||||    
T  3666783 agttttttctatgctt 3666798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 8312335 - 8312256
Alignment:
Q  143 ttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctctt 222  Q
    |||||||||||||| |||| |||||||||||| ||| ||| |||||||||| ||||||||||||||| || |||||||||    
T  8312335 ttaattaaacatatgtcacatagaccaatattcatagaaactcaatgaaaatttttataaaatgacaaattttttctctt 8312256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 15724370 - 15724278
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatat 156  Q
    |||||||||||| |||||||||||||||  |||| |||||| ||||||| |||||||||||    | ||||| ||||||||||||||||||||||||    
T  15724370 ctcaaccgcatggtttggtttggtttgcaatttttattttaccaaccgaaccaaaccaaac----cgcaacataagaaaaatgttaattaaacatat 15724278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 18536204 - 18536383
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacat-at 156  Q
    |||||||| |||| |||| |||||||||  ||||||||||||  |||||| ||||| ||||||| ||| ||||| || |||||   ||||||||  | ||    
T  18536204 actcaacctcatggtttgctttggtttgtagttttcattttacaaaccgaaccaaatcaaaccaaaccgcaacataataaaaacactaattaaaatttat 18536303  T
Q  157 ctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
      ||  |||||||||| | ||||||| | |||| |||||||||||||||||||||| |||||||||||| || |||||||    
T  18536304 gccaactagaccaatactcatataaactaaatggaaacttttataaaatgacatattttttctcttgttaagtttcttct 18536383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 236
Target Start/End: Complemental strand, 29233281 - 29233109
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctc 159  Q
    |||||||||||| ||||||| |||||| |||||| |||||| ||||||| |||||| ||||    ||||| | ||||||||   |||||||| |||| |     
T  29233281 ctcaaccgcatggtttggttcggtttgtggttttaattttaccaaccgaaccaaacaaaac----cccaatataagaaaaacactaattaaatatatatt 29233186  T
Q  160 acgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    || | || ||||| | ||| ||| |||||||||||||| |||||||||||||| |||||  ||||| || |||||||    
T  29233185 acatggatcaatactcatagaaactcaatgaaaactttaataaaatgacatattttttcctttgttaagtttcttct 29233109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 5121947 - 5122093
Alignment:
Q  75 tggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatat 173  Q
    |||||||||||||||||||||||||| ||||  | ||||||||||||| ||| ||||| |  ||||||||||| ||||||||  |||| |||| |||||     
T  5121947 tggtttggtttgcggttttcattttaccaactaaaccaaaccaaaccaaaccgcaacata--aaaaatgttaa-taaacataagtcacctagatcaatac 5122043  T
Q  174 ttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |   ||||| || ||| ||| |||||||||||||||||| ||||||||||||    
T  5122044 t--cataaactcgatgtaaaattttataaaatgacatattttttctcttgtt 5122093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 217
Target Start/End: Original strand, 36106015 - 36106174
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| |||| |||| |||||||||| ||||||| ||||||| ||| ||||||||| ||| ||||| | ||||||   ||||||||  |||     
T  36106015 actcaaccgcatggtttgctttgctttgcggtttccattttaccaaccgaaccagaccaaaccaaaccgcaacataggaaaaactctaattaaatctatg 36106114  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatatttt 217  Q
    |||| |||||||||| | ||| ||  |||||  |||||||||||||| | ||||| ||||    
T  36106115 tcacctagaccaatactcatagaatctcaattgaaacttttataaaacggcatatttttt 36106174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 48602055 - 48602221
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| || |||| |||||||  |||| || ||| ||||||| |||| |||||||| ||| ||||| || |||||  ||||||||||||||     
T  48602055 actcaaccgcatggttcggttcggtttgcattttt-atcttaccaaccgaaccaatccaaaccaaaccacaacataaaaaaaacattaattaaacatatg 48602153  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    | || |||||||||| | | ||||| |||||  ||| ||||||||||||| ||||| |||||| ||||    
T  48602154 ttacctagaccaatactcaaataaactcaatagaaaattttataaaatgaaatatactttctcatgtt 48602221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 23119852 - 23119913
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacc 121  Q
    |||||||||||||||||||| |||||||| ||||||||||| ||||||| | ||||||||||    
T  23119852 ctcaaccgcatgatttggttcggtttgcgattttcattttaccaaccgaactaaaccaaacc 23119913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 54273479 - 54273536
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaacc 116  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||    
T  54273479 actcaaccgcatgattcggtttggtttgcggtttttattttagcaaccgaaccaaacc 54273536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 14867218 - 14867126
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||||||||||||| |||| |||||||||| | ||| ||| | ||| ||||||| |||||||||||||||  ||||||||||| || |||||||    
T  14867218 taattaaacatatatcacctagaccaatactcatagaaacttaatcaaaacttctataaaatgacatattatttctcttgttaagtttcttct 14867126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 27743872 - 27743809
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacca 122  Q
    |||||||||||||  |||||||||||||||||||| |||||| |||| || |||||||||||||    
T  27743872 actcaaccgcatgggttggtttggtttgcggttttaattttaccaactgaaccaaaccaaacca 27743809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 4689149 - 4689051
Alignment:
Q  127 caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    ||||| ||||||||   ||||||||| ||| |||| ||||| |||| | ||| ||| ||||||||||||| |||||||||| |||| ||||||||||||    
T  4689149 caacataagaaaaacaataattaaacttatgtcacctagacaaatactcataaaaactcaatgaaaacttctataaaatgatatattttttctcttgtt 4689051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 242
Target Start/End: Complemental strand, 28148299 - 28148119
Alignment:
Q  62 caaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacac-ccaacagaagaaaaatgttaattaaacatatctca 160  Q
    |||||||||||||| ||| ||||||||||||| ||||||  |||||| |||||||||| || ||  ||| | ||||||||   |||||||| | ||  ||    
T  28148299 caaccgcatgattttgttcggtttgcggttttgattttactaaccgaaccaaaccaaatcaaactgcaatataagaaaaacactaattaaatacatacca 28148200  T
Q  161 cgtagaccaatatttatataaattcaatgaaaacttttataaaatgacata-tattttctcttgttcagattcttctctgctt 242  Q
      |||||||||| | ||||||||||||||  |||||| ||  ||||| ||| ||||||||| |||| || ||||||| |||||    
T  28148199 tctagaccaatactcatataaattcaatgtgaactttaat--aatgaaatattattttctcctgttaagtttcttctttgctt 28148119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 6102324 - 6102247
Alignment:
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||| |||| ||||| | ||| ||||||||||||||||||||||||||||||| | ||||||| |||| || |||||||    
T  6102324 tcacctagatcaatactcataaaaattcaatgaaaacttttataaaatgacat-ttttttctcgtgttaagtttcttct 6102247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 23449530 - 23449683
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccaca-cccaacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| |||||||  |||||| ||||| |||||| ||||||| |||||||||| || | | ||| | ||||||||  ||||||||| | ||     
T  23449530 actcaaccgcatggtttggttcagtttgcagttttgattttaccaaccgaaccaaaccaaatcaaatcgcaatataagaaaaacattaattaaatacata 23449629  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatat 212  Q
    |||  |||||||||| | ||  | |||||||| ||||||| ||||||||| ||||    
T  23449630 tcatctagaccaatactcattgagattcaatg-aaactttaataaaatgaaatat 23449683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 45150481 - 45150597
Alignment:
Q  2 aaattgaaaccgcaaaaaattacatttggttcggatgtaatcagatcannnnnnnnnactcaaccgcatgatttggtttggtttgcggttttcattttat 101  Q
    ||||||||||||||||||||  || |||||||||||||| |||||  |         ||||||  ||||||||| ||||||||||||||||| ||||||     
T  45150481 aaattgaaaccgcaaaaaatggcacttggttcggatgtattcagacaattttttt--actcaatagcatgattttgtttggtttgcggttttgattttac 45150578  T
Q  102 caaccgacccaaaccaaac 120  Q
    ||| ||| |||||||||||    
T  45150579 caatcgaaccaaaccaaac 45150597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 48292976 - 48293038
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacca 122  Q
    ||||||| |||| |||||||||||||||||||||||||||| | ||| |  ||||||||||||    
T  48292976 ctcaaccacatggtttggtttggtttgcggttttcattttacctacccaaacaaaccaaacca 48293038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 18319126 - 18319298
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc------caacagaagaaaaatgttaattaaac 152  Q
    |||||| | |||| |||||||||||  |||||||| |||||| ||||| | ||||| ||||||  |||      ||||| ||||||||  ||||||||||    
T  18319126 actcaatctcatggtttggtttggtccgcggtttttattttaccaaccaaaccaaatcaaacctaaccaaacaacaacataagaaaaacattaattaaac 18319225  T
Q  153 atatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |||| |||  ||||||||||   ||| ||| |||||| ||| |||||| ||||||||||| |||  |||||||    
T  18319226 atatgtcatctagaccaatacaaatagaaactcaatggaaatttttatgaaatgacatatttttggtcttgtt 18319298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 18396863 - 18396691
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc------caacagaagaaaaatgttaattaaac 152  Q
    |||||| | |||| |||||||||||  |||||||| |||||| ||||| | ||||| ||||||  |||      ||||| ||||||||  ||||||||||    
T  18396863 actcaatctcatggtttggtttggtccgcggtttttattttaccaaccaaaccaaatcaaacctaaccaaacaacaacataagaaaaacattaattaaac 18396764  T
Q  153 atatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |||| |||  ||||||||||   ||| ||| |||||| ||| |||||| ||||||||||| |||  |||||||    
T  18396763 atatgtcatctagaccaatacaaatagaaactcaatggaaatttttatgaaatgacatatttttggtcttgtt 18396691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 29701045 - 29701012
Alignment:
Q  184 tcaatgaaaacttttataaaatgacatatatttt 217  Q
    ||||||||||||||||||||||||||||||||||    
T  29701045 tcaatgaaaacttttataaaatgacatatatttt 29701012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 41260647 - 41260462
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacac-ccaacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| || ||||   |||| |||||| |||||| |||||||  |||||||||||| ||  ||||| ||||||||   ||||||||| |||     
T  41260647 actcaaccgcatggttcggttcaatttgtggtttttattttaccaaccgaatcaaaccaaaccaaactgcaacataagaaaaacactaattaaacttatg 41260548  T
Q  158 tcacgtagaccaatatttatataaattcaatgaa-aacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    |||  || ||||||| | ||| ||| || |||||    |||||||||||||||||| |||||||||||  || ||||||| |||||    
T  41260547 tcatctaaaccaatactcatagaaactccatgaattttttttataaaatgacatattttttctcttgtaaagtttcttctttgctt 41260462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 23625474 - 23625522
Alignment:
Q  73 tttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacc 121  Q
    ||||||||||||||||||||| |||||| ||||| | ||||||||||||    
T  23625474 tttggtttggtttgcggttttgattttaccaaccaaaccaaaccaaacc 23625522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 25686031 - 25686089
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaa 118  Q
    |||||||| |||| ||||||||||||||||||||| |||||| ||||| | |||||||||    
T  25686031 actcaaccacatggtttggtttggtttgcggtttttatttta-caaccaaaccaaaccaa 25686089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 225
Target Start/End: Complemental strand, 40494928 - 40494783
Alignment:
Q  79 ttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttat 177  Q
    |||||||||||||||| ||||| ||||  | | |||||||| || ||  ||||| |||||||||| || ||||| |||| |||| |||||||||| |  |    
T  40494928 ttggtttgcggttttc-ttttaccaacgaaactaaaccaaaacaaactacaacataagaaaaatgctagttaaaaatatgtcacttagaccaatactctt 40494830  T
Q  178 ataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    | || |||||| | |||||||||||||||||| | ||||| |||||||    
T  40494829 agaacttcaat-ataacttttataaaatgacaaaaattttatcttgtt 40494783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 41312286 - 41312401
Alignment:
Q  127 caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttc 226  Q
    ||||| ||||||||  |||||||||  ||| |||| ||||||| || | ||| ||| |||||  ||||||||||| |||||||||| |||||| |||||     
T  41312286 caacataagaaaaactttaattaaatctatatcacctagaccagtactcatagaaactcaatagaaacttttatagaatgacatattttttctattgtta 41312385  T
Q  227 agattcttctctgctt 242  Q
    |  ||||||| |||||    
T  41312386 aatttcttctttgctt 41312401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 35232910 - 35233008
Alignment:
Q  127 caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    ||||| ||||||||   ||||||||| ||| |||| ||||| ||||   ||| ||| ||||||||||||| ||||||||||||| | |||| |||||||    
T  35232910 caacataagaaaaacactaattaaacttatgtcacctagacaaatacacatagaaactcaatgaaaacttctataaaatgacattttttttttcttgtt 35233008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 45464670 - 45464541
Alignment:
Q  87 cggttttcattttatcaaccgacccaaaccaaaccacacccaacag------aagaaaaatgttaattaaacatatctcacgtagaccaatatttatata 180  Q
    ||||||| |||||||||||||| ||||||||||||| | | ||| |      |||||||||  | |||||| |||| | |  || ||||||| | ||| |    
T  45464670 cggttttgattttatcaaccgaaccaaaccaaaccaaatcaaaccgcaatataagaaaaatactgattaaatatatataatctaaaccaatactcataga 45464571  T
Q  181 aattcaatgaaaacttttataaaatgacat 210  Q
    ||||||||||||||||| ||||||||||||    
T  45464570 aattcaatgaaaactttaataaaatgacat 45464541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 3999292 - 3999211
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaa 139  Q
    |||||||| |||| ||||||| ||||||||||||| |||||| |||| ||   ||||||||||| ||| ||||| |||||||    
T  3999292 actcaaccacatggtttggttcggtttgcggtttttattttaccaactgaattaaaccaaaccaaaccgcaacataagaaaa 3999211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 7763770 - 7763811
Alignment:
Q  184 tcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    ||||||||||||||||||||||||||| | ||||||| ||||    
T  7763770 tcaatgaaaacttttataaaatgacattttttttctcgtgtt 7763811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 19753093 - 19753142
Alignment:
Q  71 gatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaac 120  Q
    ||||| ||||||||||||||||| |||||| ||| ||| |||||||||||    
T  19753093 gattttgtttggtttgcggttttgattttaccaatcgaaccaaaccaaac 19753142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 19786713 - 19786664
Alignment:
Q  71 gatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaac 120  Q
    ||||| ||||||||||||||||| |||||| ||| ||| |||||||||||    
T  19786713 gattttgtttggtttgcggttttgattttaccaatcgaaccaaaccaaac 19786664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 18399475 - 18399383
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||||||||||||| |||  |||| |||||   ||| ||| |||||| |||||||||| ||||||||||| ||||  |||||| || |||||||    
T  18399475 taattaaacatatatcatctagaacaatacaaatagaaactcaatggaaacttttatgaaatgacatattttttgacttgttaagtttcttct 18399383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 18881612 - 18881688
Alignment:
Q  73 tttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaatt 148  Q
    |||||||||||||||| |||| ||||||||||| || | ||||| ||||| ||| ||||| ||| |||||| |||||    
T  18881612 tttggtttggtttgcgatttttattttatcaactgaactaaaccgaaccaaaccgcaacataagtaaaatgctaatt 18881688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 35014675 - 35014635
Alignment:
Q  195 ttttataaaatgacatatattttctcttgttcagattcttc 235  Q
    ||||||||| ||||||||||||||||||||| || ||||||    
T  35014675 ttttataaagtgacatatattttctcttgttaagtttcttc 35014635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 212
Target Start/End: Original strand, 48653566 - 48653594
Alignment:
Q  184 tcaatgaaaacttttataaaatgacatat 212  Q
    |||||||||||||||||||||||||||||    
T  48653566 tcaatgaaaacttttataaaatgacatat 48653594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 51907463 - 51907411
Alignment:
Q  184 tcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||||| |||||||||||||||||||| || ||||| |||||| || |||||||    
T  51907463 tcaataaaaacttttataaaatgacacattttttcgcttgttaagtttcttct 51907411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 156
Target Start/End: Original strand, 691105 - 691253
Alignment:
Q  7 gaaaccgcaaaaaattacatttggttcggatgtaatcagatcannnnnnnnnactcaaccgcatgatttggtttggtttgcggttttcattttatcaacc 106  Q
    ||||||||||||||| ||||||| ||||||||||||  |||||          |||||||||||| ||||||||| |||||||||||||||||| |||||    
T  691105 gaaaccgcaaaaaatcacatttgattcggatgtaattggatcattttcttg--ctcaaccgcatggtttggtttgatttgcggttttcattttaccaacc 691202  T
Q  107 gacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatat 156  Q
    || ||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  691203 gaaccaaaccaaaccaaaccgcaacaaaagaaaaatgttaattaaacatat 691253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 11403066 - 11402952
Alignment:
Q  127 caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttc 226  Q
    ||||| ||||||||||||||||||||||||||||| |||||| ||| | |||||||||||||| |||||| ||||||||||||||| ||||||||||||     
T  11403066 caacataagaaaaatgttaattaaacatatctcacctagaccgatactcatataaattcaatggaaacttgtataaaatgacatattttttctcttgtt- 11402968  T
Q  227 agattcttctctgctt 242  Q
    ||||| |||| |||||    
T  11402967 agatttttctttgctt 11402952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 61 - 218
Target Start/End: Complemental strand, 18432625 - 18432467
Alignment:
Q  61 tcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctc 159  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||||| ||||| ||||||| ||| ||||| || |||||  ||||||||   ||| ||    
T  18432625 tcaaccgcatagtttggtttggtttgcggtttttattttatcaaccgaaccaaatcaaaccaaaccgcaacataaaaaaaacattaattaagtctatgtc 18432526  T
Q  160 acgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttc 218  Q
    || || ||||||| | ||| ||| ||||||||||||||||||||||||||||| |||||    
T  18432525 acctataccaatactcatagaaaatcaatgaaaacttttataaaatgacatattttttc 18432467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 80 - 213
Target Start/End: Complemental strand, 39730770 - 39730637
Alignment:
Q  80 tggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttata 178  Q
    ||||||||||||||||||||| ||||| | | ||||||||||  ||  ||||| ||||||||||| ||||||||||||||||| |||||||||| |||||    
T  39730770 tggtttgcggttttcattttaccaaccaaacaaaaccaaaccgaactgcaacataagaaaaatgt-aattaaacatatctcacctagaccaatacttata 39730672  T
Q  179 taaattcaatgaaaacttttataaaatgacatata 213  Q
     ||| |||||||||| |||||||||||||||||||    
T  39730671 aaaactcaatgaaaagttttataaaatgacatata 39730637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 22553894 - 22553717
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    |||||||| |||  ||| ||| |||||||| |||| |||||| ||||| | ||||||||||||| ||| ||||| ||||||||   ||||||||||||||    
T  22553894 actcaaccccatagttttgttcggtttgcgatttt-attttaccaaccaaaccaaaccaaaccaaaccgcaacataagaaaaacactaattaaacatatc 22553796  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||| |||| ||||| | ||| ||| ||||| ||||||| ||||||||||||||| |||||||||||| || |||||||    
T  22553795 tcacctagatcaatactcatagaaactcaattaaaacttctataaaatgacatattttttctcttgttaagtttcttct 22553717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 225
Target Start/End: Complemental strand, 2423340 - 2423180
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatctc 159  Q
    ||||||| |||| ||||||||| |||||||||||||||||| ||||||| |||||||||||    | ||||| ||||||||  |||||||||  ||| ||    
T  2423340 ctcaaccacatggtttggtttgatttgcggttttcattttaccaaccgaaccaaaccaaac----cgcaacataagaaaaacattaattaaatctatgtc 2423245  T
Q  160 acgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    || ||||| |||| | ||| ||| |||||  |||||||||| ||||||||||||||||||||||||    
T  2423244 acctagacaaatactcataaaaactcaatagaaacttttat-aaatgacatatattttctcttgtt 2423180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 219
Target Start/End: Complemental strand, 6633842 - 6633680
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaa-ccacacc-caacagaagaaaaatgttaattaaacatat 156  Q
    |||||||  |||| ||||||||||||||||||||||||||||  |||||| |||||  ||| ||| ||| ||| | ||||||||  |||||||||  |||    
T  6633842 actcaactacatggtttggtttggtttgcggttttcattttacgaaccgaaccaaaaaaaaaccaaaccgcaatataagaaaaactttaattaaatctat 6633743  T
Q  157 ctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttct 219  Q
     |||||| |||||||| | ||| ||| ||||||||||||||||||||||||||||| ||||||    
T  6633742 gtcacgtggaccaatactcatagaaactcaatgaaaacttttataaaatgacatattttttct 6633680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 38147597 - 38147482
Alignment:
Q  111 caaaccaaaccacaccc-aacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgaca 209  Q
    |||||||||||| |||| |||| ||||||||   ||||||||||| | |||| |||||||||||| ||| ||| |||||||||||||||||||||||| |    
T  38147597 caaaccaaaccaaaccccaacataagaaaaacactaattaaacatgtgtcacatagaccaatattcatagaaactcaatgaaaacttttataaaatgata 38147498  T
Q  210 tatattttctcttgtt 225  Q
    ||| ||||||||||||    
T  38147497 tattttttctcttgtt 38147482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 6595464 - 6595372
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatat 156  Q
    |||||| ||||| |||||||||||||||||||||||||||| ||||| | |||||||||||    | ||||| ||||||||||||||||||||||||    
T  6595464 ctcaactgcatggtttggtttggtttgcggttttcattttaccaaccaaaccaaaccaaac----cgcaacataagaaaaatgttaattaaacatat 6595372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 41455411 - 41455244
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    |||||||| |||| ||||||| | ||||||||| | |||||| ||||||| |||||||||| |  ||| ||| | ||||||||   |||||||| ||||     
T  41455411 actcaaccacatggtttggttcgatttgcggttatgattttaccaaccgaaccaaaccaaatcgaaccgcaatataagaaaaacactaattaaatatata 41455312  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |||| | |||||||| | ||| ||| |||||| ||||||| |||||||||||||| ||||||||||||    
T  41455311 tcacttggaccaatactcatagaaactcaatggaaactttaataaaatgacatattttttctcttgtt 41455244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 23623540 - 23623426
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| |||||||||||||||||||||||||| |  |||||| ||||||||||||| ||| ||||| ||||||  | ||||||||| | ||     
T  23623540 actcaaccgcatggtttggtttggtttgcggttttcatttgacaaaccgaaccaaaccaaaccaaaccgcaacataagaaattttttaattaaatacatg 23623441  T
Q  158 tcacgtagaccaata 172  Q
    |||| ||||||||||    
T  23623440 tcacctagaccaata 23623426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 4414806 - 4414609
Alignment:
Q  8 aaaccgcaaaaaattacatttggttcggatgtaatcagatcannnnnnnnnactcaaccgcatgatttggtttggtttgcggttttcattttatcaaccg 107  Q
    ||||||||||||||| |||||||||| |||||| ||| ||||         ||||||||| ||| |||| |||||||||  ||||| ||||||  ||| |    
T  4414806 aaaccgcaaaaaattgcatttggttcagatgtattcatatcattttttt--actcaaccgtatggtttgatttggtttgttgtttttattttacgaactg 4414709  T
Q  108 acccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatg 206  Q
    | | ||||||||||| ||  ||||| ||||||||  |||||||||||||| |||  || ||||||| ||||| ||| |||||||||||||||||||||||    
T  4414708 aac-aaaccaaaccaaactacaacataagaaaaacattaattaaacatatgtcatataaaccaatacttatagaaactcaatgaaaacttttataaaatg 4414610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 42920589 - 42920761
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacccaacagaagaaaaatgttaattaaacatatct 158  Q
    |||||| |||||| ||||||||||||||||||||| |||||| | | |||  ||||||||||  ||    ||| ||||||||  ||||||||| |||| |    
T  42920589 actcaagcgcatggtttggtttggtttgcggtttttatttta-cgatcgaatcaaaccaaactgca----acataagaaaaactttaattaaatatatgt 42920683  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||  |||| || || | ||| ||| ||||| ||||||||||||||||||||||| |||||||||||| || |||||||    
T  42920684 catctagatcactactcatagaaactcaattaaaacttttataaaatgacatattttttctcttgttaagtttcttct 42920761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 25495629 - 25495450
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| |||||||   ||||||||||| |||||| ||||||| ||||||||||| | ||| ||| | ||||||||   |||||||| || |     
T  25495629 actcaaccgcatggtttggttca-tttgcggttttaattttaccaaccgaaccaaaccaaactaaaccgcaatataagaaaaaaactaattaaatatgta 25495531  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgaca--tatattttctcttgttcagattcttct 236  Q
    |||  |||||||||| | |||||| ||||||| ||||||| |||||||||||  | | |||||||||||| || |||||||    
T  25495530 tcatctagaccaatactcatataagttcaatggaaactttaataaaatgacattttttttttctcttgttaagtttcttct 25495450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 41805454 - 41805547
Alignment:
Q  143 ttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||||||| ||||| |||| |||||||||| ||||| ||| |||||| ||||||||||||||||||| || |||||||||| | || |||||||    
T  41805454 ttaattaagcatatgtcacctagaccaatacttatagaaactcaatggaaacttttataaaatgacacattttttctcttgataagtttcttct 41805547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 40109091 - 40109241
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||| |||||||| ||||||||||| |||| |||||| |||||||  |||||||||| | ||| ||||| ||||||||  |||||||||||| ||    
T  40109091 actcaaccgtatgatttgatttggtttgcgatttttattttaacaaccgagtcaaaccaaacaaaaccgcaacataagaaaaacattaattaaacatgtc 40109190  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatat 212  Q
     | |  ||||||||| |   | |||||||||||||||||||||  ||||||||||    
T  40109191 gctc--agaccaatact--aaaaaattcaatgaaaacttttatcgaatgacatat 40109241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 14652924 - 14652845
Alignment:
Q  127 caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgac 208  Q
    ||||| |||||||||||||| ||||||| |||||||  |||||||  ||||| |||  ||||||||||||||||||||||||    
T  14652924 caacataagaaaaatgttaactaaacatgtctcacg--gaccaatgcttatagaaacgcaatgaaaacttttataaaatgac 14652845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 217
Target Start/End: Original strand, 8541875 - 8542030
Alignment:
Q  61 tcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacac-ccaacagaagaaaaatgttaattaaacatatctc 159  Q
    |||||||||||||||||||  |||||||||||| |||| |||||| || ||||| ||||  | ||  ||||| ||| ||||| ||||||||||||||       
T  8541875 tcaaccgcatgatttggttcagtttgcggtttttatttcatcaactgaaccaaatcaaatgaaactgcaacataag-aaaatattaattaaacatatgct 8541973  T
Q  160 acgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatatttt 217  Q
    || |||| ||| | | ||| ||| ||||||||||| ||||||||||||||||| ||||    
T  8541974 acatagatcaagactcatagaaactcaatgaaaac-tttataaaatgacatatttttt 8542030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 28224409 - 28224470
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaac 120  Q
    ||||||| ||||  ||||||||||||||||||||| |||||| ||||||| |||||||||||    
T  28224409 actcaactgcatagtttggtttggtttgcggttttgattttaccaaccgaaccaaaccaaac 28224470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 242
Target Start/End: Complemental strand, 10090662 - 10090583
Alignment:
Q  163 tagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    |||||||||| | | | |||||||| ||||||||| |||||||||||| | |||||||||||| || ||||||| |||||    
T  10090662 tagaccaatactcagagaaattcaaagaaaactttaataaaatgacatcttttttctcttgttgagtttcttctttgctt 10090583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 17131601 - 17131718
Alignment:
Q  1 aaaattgaaaccgcaaaaaattacatttggttcggatgtaatcagatcannnnnnnnnactcaaccgcatgatttggtttggtttgcggttttcatttta 100  Q
    |||||||||||||||||||||  || |||||||||||||| |||||  |         ||||||  ||||||||| ||||||||||||||||| ||||||    
T  17131601 aaaattgaaaccgcaaaaaatggcacttggttcggatgtattcagacaattttttt--actcaatagcatgattttgtttggtttgcggttttgatttta 17131698  T
Q  101 tcaaccgacccaaaccaaac 120  Q
     ||| ||| |||||||||||    
T  17131699 ccaatcgaaccaaaccaaac 17131718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 22747144 - 22747207
Alignment:
Q  61 tcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccaca 124  Q
    ||||||||||| |||| || ||||||||||||| |||| ||||||||| || ||||||||||||    
T  22747144 tcaaccgcatggtttgattcggtttgcggtttttatttgatcaaccgaaccgaaccaaaccaca 22747207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 32721036 - 32721135
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaa-aacttttataaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    ||||||||| ||| | || |||||||||| | | ||||||||||||||    ||||||||||||||||||||||||||||||| || || |||| |||||    
T  32721036 taattaaacctatgttacctagaccaatactcaaataaattcaatgaattttttttataaaatgacatatattttctcttgttaagtttattctttgctt 32721135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 32243960 - 32244013
Alignment:
Q  67 gcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaac 120  Q
    ||||||||| ||||||||||||||||| |||||| ||| ||| |||||||||||    
T  32243960 gcatgattttgtttggtttgcggttttgattttaccaatcgaaccaaaccaaac 32244013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 12378661 - 12378700
Alignment:
Q  85 tgcggttttcattttatcaaccgacccaaaccaaaccaca 124  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  12378661 tgcggttttcattttatcaatcgaaccaaaccaaaccaca 12378700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 36568244 - 36568185
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaa 118  Q
    |||||||| |||| |||||||  |||||||||||| |||||| ||||||| |||||||||    
T  36568244 actcaaccacatggtttggttcagtttgcggttttgattttaccaaccgaaccaaaccaa 36568185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 2802634 - 2802696
Alignment:
Q  163 tagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |||||||||| | ||| ||| |||| ||||||||| |||||||||| ||| ||||||||||||    
T  2802634 tagaccaatactcataaaaactcaacgaaaactttgataaaatgacgtattttttctcttgtt 2802696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 12680673 - 12680722
Alignment:
Q  73 tttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacca 122  Q
    |||||||||||||||||||| ||| | | ||||||| |||||||||||||    
T  12680673 tttggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaacca 12680722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 14652964 - 14652931
Alignment:
Q  73 tttggtttggtttgcggttttcattttatcaacc 106  Q
    |||||||||||||||||||||||||||| |||||    
T  14652964 tttggtttggtttgcggttttcattttaccaacc 14652931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 23418437 - 23418328
Alignment:
Q  127 caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttc 226  Q
    ||||| ||||||||  ||||||||  |||| |||| |||||||| | | ||| |||   |||| |||||| |||||| |||||||| ||||||||||||     
T  23418437 caacataagaaaaacattaattaatgatatgtcacctagaccaacactcatagaaacaaaatgcaaacttctataaactgacatattttttctcttgtta 23418338  T
Q  227 agattcttct 236  Q
    || |||||||    
T  23418337 agtttcttct 23418328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 31075299 - 31075343
Alignment:
Q  192 aacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||||| |||||||||||||| |||||||||||| || |||||||    
T  31075299 aactttcataaaatgacatattttttctcttgttaagtttcttct 31075343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 33793164 - 33793108
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaac 115  Q
    |||||||||  || |||| |||||||||||||||| |||||||||||| | ||||||    
T  33793164 actcaaccgtgtggtttgatttggtttgcggttttgattttatcaaccaaaccaaac 33793108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 242
Target Start/End: Original strand, 34111381 - 34111506
Alignment:
Q  113 aaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacata 211  Q
    |||||||||| ||| ||||| ||||||||  |||||||||||||| |||| || || |||| | || |||| |||||| | ||||||||||||||||||     
T  34111381 aaccaaaccaaaccgcaacataagaaaaaa-ttaattaaacatatatcacctaaactaatactcat-taaactcaatggacacttttataaaatgacat- 34111477  T
Q  212 tattttctcttgttcagattcttctctgctt 242  Q
      |||| ||||||| || ||||||| |||||    
T  34111478 --ttttttcttgttaagtttcttctttgctt 34111506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 36568145 - 36568085
Alignment:
Q  165 gaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |||||||| | ||| ||| |||||| ||||||| ||| |||||||||| ||||||||||||    
T  36568145 gaccaatactcataaaaactcaatggaaactttgatacaatgacatattttttctcttgtt 36568085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688 (Bit Score: 64; Significance: 4e-28; HSPs: 4)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 225
Target Start/End: Complemental strand, 1707 - 1544
Alignment:
Q  68 catgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtaga 166  Q
    |||| ||||||||||||||||||||| |||||| |||||||  |||||||||||| ||| ||||| ||||||||   ||||||||||||| |    ||||    
T  1707 catggtttggtttggtttgcggtttttattttaccaaccgaatcaaaccaaaccaaaccacaacataagaaaaacactaattaaacatatgttgtctaga 1608  T
Q  167 ccaatatttata-----taaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |||||||| |||     |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  1607 ccaatattcatagaaactaaactcaatgaaaacttttataaaatgacatattttttctcttgtt 1544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 236
Target Start/End: Complemental strand, 3288 - 3127
Alignment:
Q  80 tggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttata 178  Q
    |||||||||||||| |||||| ||||||| ||||||||||||| ||| ||||| ||||||||   ||||||||||||| |    || ||||||||| |||    
T  3288 tggtttgcggtttttattttaccaaccgaaccaaaccaaaccaaaccacaacataagaaaaacactaattaaacatatattgtctaaaccaatattcata 3189  T
Q  179 -----taaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
         |||| ||||||||||||||||||||||||||||| |||||||||||| || |||||||    
T  3188 gaaactaaactcaatgaaaacttttataaaatgacatat-ttttctcttgttaagtttcttct 3127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 8159 - 8113
Alignment:
Q  179 taaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  8159 taaactcaatgaaaacttttataaaatgacatattttttctcttgtt 8113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 4850 - 4794
Alignment:
Q  179 taaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||| || |||||||    
T  4850 taaactcaatgaaaacttttataaaatgacatat-ttttctcttgttaagtttcttct 4794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 12659815 - 12659976
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatc 157  Q
    ||||||||||||| |||||||  |||||||||||  |||||| ||||||| ||||||||||||| ||| ||||| | ||||||  ||||||||||||||     
T  12659815 actcaaccgcatggtttggttcagtttgcggtttctattttaccaaccgaaccaaaccaaaccaaaccacaacataggaaaaacattaattaaacatatg 12659914  T
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctc 220  Q
    |||| || | ||||| | ||| ||| |||||| |||||| ||||||||||||||| |||||||    
T  12659915 tcacataaatcaatactcatagaaactcaatg-aaacttctataaaatgacatattttttctc 12659976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 9012395 - 9012563
Alignment:
Q  75 tggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgt-taattaaacatatctcacgtagaccaata 172  Q
    |||||||||||||||||||||| ||| ||||||| ||||  ||||||| ||| ||||| || |||||    ||||||||||||| | || || |||||||    
T  9012395 tggtttggtttgcggttttcatcttaccaaccgaaccaatacaaaccaaaccgcaacataaaaaaaaacactaattaaacatatgttacctaaaccaata 9012494  T
Q  173 tttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttctctgct 241  Q
     | | || || |||||| ||||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  9012495 ctcaaatgaactcaatggaaacttttataaaatgacatatattttctcttgttaagtttcttctttgct 9012563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 28442007 - 28441829
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc--caacagaagaaaaatgttaattaaacatat 156  Q
    ||||||||| ||  ||||||||||||| ||||||| |||| | ||||||| ||||||||||||| |||  ||| | ||||||||  ||||| ||| ||||    
T  28442007 actcaaccgtattgtttggtttggtttacggtttttatttaaccaaccgaaccaaaccaaaccaaaccggcaatataagaaaaaa-ttaatcaaatatat 28441909  T
Q  157 ctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
     | || |||| ||||| | ||| ||| |||||||||||||||||||||||||||||  ||||| ||||| || |||||||    
T  28441908 ataacatagatcaatactcataaaaactcaatgaaaacttttataaaatgacatattctttcttttgttaagtttcttct 28441829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 27675003 - 27674893
Alignment:
Q  113 aaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacata 211  Q
    |||||||||| ||| ||||| |||||||||||| ||||||||||| || | |||||||||| | ||| ||| ||| || |||||||||||||||||||||    
T  27675003 aaccaaaccaaaccgcaacataagaaaaatgttcattaaacatatgtcccctagaccaatactcatagaaactcattggaaacttttataaaatgacata 27674904  T
Q  212 tattttctctt 222  Q
    | |||||||||    
T  27674903 ttttttctctt 27674893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 236
Target Start/End: Original strand, 24681633 - 24681811
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatct 158  Q
    |||||||| ||| ||||||| |||||||||| || |||||| || |||| | |||||||| || ||| ||| | ||||||||   |||||||| |||| |    
T  24681633 ctcaaccgtatggtttggttcggtttgcggtcttgattttaccagccgaactaaaccaaaacaaaccacaatataagaaaaacactaattaaatatatat 24681732  T
Q  159 cacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacata-tattttctcttgttcagattcttct 236  Q
    ||  |||| ||||| ||||| ||| |||||| ||||||| ||||||||||||| | |||||||||||| || |||||||    
T  24681733 catctagatcaataattataaaaactcaatggaaactttaataaaatgacatatttttttctcttgttaagtttcttct 24681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 1271628 - 1271487
Alignment:
Q  102 caaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttat 200  Q
    ||||||| ||||||||||||| ||| ||| | ||||||||   |||||||| |||  |||| |||||||||| | ||| ||| |||||| ||||||| ||    
T  1271628 caaccgaaccaaaccaaaccaaaccgcaatataagaaaaacactaattaaatatacatcacttagaccaatactcatagaaactcaatggaaactttaat 1271529  T
Q  201 aaaatgacatatattttctcttgttcagattcttctctgctt 242  Q
    ||||||| |||| |||||||||||| || ||||||| |||||    
T  1271528 aaaatgatatattttttctcttgttaagtttcttctttgctt 1271487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 31477759 - 31477820
Alignment:
Q  60 ctcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacc 121  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  31477759 ctcaaccacatggtttggtttggtttgcggttttcattttaccaaccgaaccaaaccaaacc 31477820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 30943012 - 30942944
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatat 212  Q
    ||||||||||||| |||| ||||  |||||||||| ||| |||||||||||||||||||||||||||||    
T  30943012 taattaaacatatgtcacctagaataatatttatagaaactcaatgaaaacttttataaaatgacatat 30942944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 40436890 - 40436808
Alignment:
Q  143 ttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    ||||||||||| ||||||  ||||| |||| ||||| ||| |||||| ||| |||||||||||||||||| |||||| |||||    
T  40436890 ttaattaaacaaatctcatctagacaaatacttatagaaactcaatggaaatttttataaaatgacatattttttcttttgtt 40436808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 44024628 - 44024550
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctctt 222  Q
    |||||||| |||| |||| ||||| |||| | |||||||||||||| ||||||| | |||||||||||| |||||||||    
T  44024628 taattaaatatatatcacatagactaatactcatataaattcaatggaaactttaacaaaatgacatattttttctctt 44024550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 8036122 - 8036061
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaac 120  Q
    |||||||| |||| ||||||||||||| | |||||||||||| ||||||| |||||||||||    
T  8036122 actcaaccacatggtttggtttggtttacagttttcattttaccaaccgaaccaaaccaaac 8036061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 13325830 - 13325773
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaacc 116  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||||| | |||||||    
T  13325830 actcaaccgcatggtttggttcggtttgcggttttgattttatcaaccaaaccaaacc 13325773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 44334591 - 44334632
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcatttta 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  44334591 actcaaccgtatgatttggtttggtttgcggttttcatttta 44334632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 12193092 - 12193168
Alignment:
Q  143 ttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttct 219  Q
    ||||||||| |||| |||| |||||||||| | ||| |||||||||| ||||||| |||||||||||| | ||||||    
T  12193092 ttaattaaatatatatcacctagaccaatactcatagaaattcaatggaaactttaataaaatgacattttttttct 12193168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 12437520 - 12437596
Alignment:
Q  143 ttaattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttct 219  Q
    ||||||||| |||| |||| |||||||||| | ||| |||||||||| ||||||| |||||||||||| | ||||||    
T  12437520 ttaattaaatatatatcacctagaccaatactcatagaaattcaatggaaactttaataaaatgacattttttttct 12437596  T

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Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 28072684 - 28072740
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaac 115  Q
    ||||||||||||| ||||||||||||||||||||| |||||| |||| || ||||||    
T  28072684 actcaaccgcatgttttggtttggtttgcggtttttattttagcaactgaaccaaac 28072740  T

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Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 11219503 - 11219440
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacca 122  Q
    |||||| | |||| ||||||| ||||||||||||| |||||| ||||||| |||||||||||||    
T  11219503 actcaatcacatggtttggttcggtttgcggttttgattttaccaaccgaaccaaaccaaacca 11219440  T

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Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 28802025 - 28801950
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttct 219  Q
    ||||||||||||| |||| |||| ||||| ||||| ||| |||||| ||| |||||||||||||||| | ||||||    
T  28802025 taattaaacatatgtcacctagatcaatacttatagaaactcaatgtaaatttttataaaatgacattttttttct 28801950  T

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Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 36340271 - 36340387
Alignment:
Q  2 aaattgaaaccgcaaaaaattacatttggttcggatgtaatcagatcannnnnnnnnactcaaccgcatgatttggtttggtttgcggttttcattttat 101  Q
    ||||||||||||||||||||  || |||||||||||||| |||||  |         ||||||  ||||||||| ||||||||||||||||| ||||||     
T  36340271 aaattgaaaccgcaaaaaatggcacttggttcggatgtattcagacaattttttt--actcaatagcatgattttgtttggtttgcggttttgattttac 36340368  T
Q  102 caaccgacccaaaccaaac 120  Q
    ||| ||| |||||||||||    
T  36340369 caatcgaaccaaaccaaac 36340387  T

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Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 11017471 - 11017434
Alignment:
Q  63 aaccgcatgatttggtttggtttgcggttttcatttta 100  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  11017471 aaccgcatgatttggtttggtttgcggttttgatttta 11017434  T

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Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 12073865 - 12073930
Alignment:
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttg 223  Q
    |||| |||||||||| | ||| ||| | |||||||||||||| |||||||||||| ||||||||||    
T  12073865 tcacctagaccaatactcataaaaacttaatgaaaacttttacaaaatgacatattttttctcttg 12073930  T

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Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 22810737 - 22810894
Alignment:
Q  63 aaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcac 161  Q
    ||||||||| ||||||| |||||||  |||| ||||||  |||||| |||||||||| || ||| ||| | ||||||||   |||||||| |||| |||     
T  22810737 aaccgcatggtttggttaggtttgcaattttgattttacaaaccgaaccaaaccaaatcaaaccacaatataagaaaaacactaattaaatatatatcat 22810836  T
Q  162 gtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttct 219  Q
     |||||||||| | ||| ||| |||| | ||| ||| |||||||||||| | ||||||    
T  22810837 ctagaccaatactcatagaaactcaacggaaattttaataaaatgacattttttttct 22810894  T

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Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 35687884 - 35687941
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaacc 116  Q
    ||||||||||||||||||||||| |||||| |||| ||||||  |||||| |||||||    
T  35687884 actcaaccgcatgatttggtttgatttgcgatttttattttagtaaccgaaccaaacc 35687941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 11219375 - 11219335
Alignment:
Q  177 tataaattcaatgaaaacttttataaaatgacatatatttt 217  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  11219375 tataaattcaatgaaaactttaataaaatgacatatttttt 11219335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15452311 - 15452378
Alignment:
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgtt 225  Q
    ||||||||||||||| | ||| ||| |||||| | |||||||| ||||||||||| |||| |||||||    
T  15452311 tcacgtagaccaatactcatagaaactcaatggagacttttattaaatgacatattttttttcttgtt 15452378  T

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Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 26774881 - 26774944
Alignment:
Q  59 actcaaccgcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacca 122  Q
    ||||||||||||| |||||||  |||||| ||||| |||||| ||||||| ||||| |||||||    
T  26774881 actcaaccgcatggtttggttcagtttgcagtttttattttaccaaccgaaccaaatcaaacca 26774944  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 12070925 - 12070998
Alignment:
Q  158 tcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagatt 231  Q
    |||| |||||||||| | ||| ||| | ||| || ||||||| |||||| |||||||||||||||||| |||||    
T  12070925 tcacctagaccaatactcatagaaacttaattaatacttttacaaaatggcatatattttctcttgttaagatt 12070998  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 30252732 - 30252800
Alignment:
Q  176 atataaattcaatgaaaacttttataaaatgaca--tatattttctcttgttcagattcttctctgctt 242  Q
    |||||| ||||||||||||||| |||||||||||  | | |||||||||||| || ||||||| |||||    
T  30252732 atataatttcaatgaaaactttaataaaatgacattttttttttctcttgtttagtttcttctttgctt 30252800  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 3682398 - 3682350
Alignment:
Q  73 tttggtttggtttgcggttttcattttatcaaccgacccaaaccaaacc 121  Q
    |||||||||||||||||||| ||| | | ||||||| ||||||||||||    
T  3682398 tttggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaacc 3682350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 19539730 - 19539690
Alignment:
Q  82 gtttgcggttttcattttatcaaccgacccaaaccaaacca 122  Q
    |||||||||||| || ||||||||||| |||||||||||||    
T  19539730 gtttgcggtttttatcttatcaaccgaaccaaaccaaacca 19539690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 236
Target Start/End: Complemental strand, 428152 - 428005
Alignment:
Q  90 ttttcattttatcaaccgacccaaaccaaaccacacc-caacagaagaaaaatgttaattaaacatatctcacgtagaccaatatttatataaattcaat 188  Q
    |||| |||||| ||||||| | |||||||| || | | |||||  ||||||||  ||||||||||||| |||| || ||||||| | ||  ||| |||||    
T  428152 tttttattttaccaaccgaactaaaccaaatcaaatctcaacatcagaaaaataataattaaacatatgtcacataaaccaatactcattaaaactcaat 428053  T
Q  189 gaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    |||||||||||||||||||||||| |||||||||||| || |||||||    
T  428052 gaaaacttttataaaatgacatattttttctcttgttaagtttcttct 428005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 6433 - 6341
Alignment:
Q  144 taattaaacatatctcacgtagaccaatatttatataaattcaatgaaaacttttataaaatgacatatattttctcttgttcagattcttct 236  Q
    ||||||||||||| |||| || ||||||| | ||| ||| | ||||||||||| ||||| ||||||||| |||||||||||| || |||||||    
T  6433 taattaaacatatgtcacctaaaccaatactcatagaaacttaatgaaaacttctataacatgacatattttttctcttgttaagtttcttct 6341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 62908 - 62855
Alignment:
Q  67 gcatgatttggtttggtttgcggttttcattttatcaaccgacccaaaccaaac 120  Q
    ||||||||| ||||||||||||||||| |||||| ||| ||| |||||||||||    
T  62908 gcatgattttgtttggtttgcggttttgattttaccaatcgaaccaaaccaaac 62855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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