View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10499_high_9 (Length: 323)
Name: NF10499_high_9
Description: NF10499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10499_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 37195834 - 37195581
Alignment:
| Q |
19 |
gggttgcttcatcaagagactagagaatgaaaggggtacttgaattgaacaagtactcgtacttaaagtgaccaaatagcatcatgtgacagccaacttt |
118 |
Q |
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| T |
37195834 |
gggttgcttcatcaagagagtagagaatgaagggggtacttgaaatgaacaagtactcgtacttaaagtgaccaaatagcatcatgtgacagccaacttt |
37195735 |
T |
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| Q |
119 |
agatatatacatctttctctgaccatttccacactatggctgccctttcctttcatctatagtttcatgtggtgtataacttaatttaatgtgaaccaca |
218 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
37195734 |
agatacatacatctttctctgaccatttccacactatggctgccctttcctttcatctatagtttcatgttgtgtataacttaatttaatgtgaaccaca |
37195635 |
T |
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| Q |
219 |
aaattttgacaattggatccatgatatcgattatttgtgaggaaaatatatatt |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37195634 |
aaattttgacaattggatccatgatatcgattatttgtgaggaaaatatatatt |
37195581 |
T |
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