View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10499_low_33 (Length: 229)
Name: NF10499_low_33
Description: NF10499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10499_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 32778310 - 32778532
Alignment:
| Q |
1 |
cagaagggtaaacacattactctgcgtccttagcaatgatgataaaacaagtgtttggtgagggccgtgtacgtgtgaatgcagaagtagaaagctcaaa |
100 |
Q |
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| T |
32778310 |
cagaagggtaaacacattactctgcgtccttagcaatgatgataaaacaagtgtttggtgagggccgtgtacgtgtgaatgcagaagtagaaagctcaaa |
32778409 |
T |
|
| Q |
101 |
tgtaacnnnnnnnattttacagtattaaatgaaaacagaaggttaaagaggaaaacatgagcataaagctactataaacctttcatagattcaacagtaa |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
32778410 |
tgtaactttttttattttacagtattaaatgaaaacagaaggttaaagaggaaaacatgagcataaagctactataaacctttcgtagattcaacagtaa |
32778509 |
T |
|
| Q |
201 |
cactagtagtgactacattaaag |
223 |
Q |
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|||||||||||||| |||||||| |
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| T |
32778510 |
cactagtagtgactgcattaaag |
32778532 |
T |
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