View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10500_high_27 (Length: 239)
Name: NF10500_high_27
Description: NF10500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10500_high_27 |
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Alignment Details
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 39718663 - 39718885
Alignment:
| Q |
1 |
ttcatataaagggatacatatattctttcatatgcatcaatttaagatcaaatcatttactaagatgataatttatcaactgtgtcgtaccatgtcgatt |
100 |
Q |
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| T |
39718663 |
ttcatataaagggatacatatattctttcatatgcatcaatttaaaatcaaatcatttactaagatgataatttatcaactgtgtcgcaccatgtcgatt |
39718762 |
T |
|
| Q |
101 |
ctctctcttaaaacaatttaaatgcttcaactccaaacaaactctaaaatattgcgacacttctaattaaaaacgtgttcagtgttctacgcgacaaata |
200 |
Q |
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|||| |||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||||| |
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| T |
39718763 |
ctctttcttaaaacaatttgaatgcttcaactccaaacaaactctaaaatactgcaacacttctaattaaaaatatgttcagtgttctacgcgaaaaata |
39718862 |
T |
|
| Q |
201 |
taaattacatccaattaatttat |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
39718863 |
taaattacatccaattaatttat |
39718885 |
T |
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