View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10501_high_20 (Length: 226)
Name: NF10501_high_20
Description: NF10501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10501_high_20 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 51679993 - 51679769
Alignment:
| Q |
1 |
aaatgcttacaaacgagtcttaaaagcaaaaactaagtcataaaataatatgtactatatagttgccaaatatctaccatatacaaggtgagaggcaaca |
100 |
Q |
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| T |
51679993 |
aaatgcttacaaacgagtcttaaaagcaaaaac-aagtcataaaataatatgtactatatagttgccaaatatctaccatatacaaggtgagaggcaaca |
51679895 |
T |
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| Q |
101 |
ttgctaagagatagagagacaaaaattaattaattaatatatacttggagtatttatttattccaaaataaataaatatggttgatccaattttgagtga |
200 |
Q |
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| T |
51679894 |
ttgctaagagatagagagacaaaaattaattaattaatatatacttggagtatttatttattccaaaataaataaatatggttgatccaattttgagtga |
51679795 |
T |
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| Q |
201 |
attaagggttgaaaaagtagtcccca |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
51679794 |
attaagggttgaaaaagtagtcccca |
51679769 |
T |
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