View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10501_high_23 (Length: 213)
Name: NF10501_high_23
Description: NF10501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10501_high_23 |
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Alignment Details
Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 29320420 - 29320247
Alignment:
| Q |
17 |
actttacatatttcataacaccaaagattatgcatatattatgaaaatagtataagggacaattaagcctagccaaaggccaaaataatgctatacgtct |
116 |
Q |
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| T |
29320420 |
actttacatatttcataacaccaaagattatgcatatattatgaaaatagtataagggacaattaagcctagccaaaggccaaaataatgctatacgtct |
29320321 |
T |
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| Q |
117 |
actatagggacatttctacaattcgaccttagatattacaatatttctcccaaatgtttaattagtcgttcatc |
190 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
29320320 |
actatagggacatttctacaattcgaccttagatattacaatatttctcccaaatgtttaattagtcattcatc |
29320247 |
T |
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