View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10501_high_9 (Length: 278)
Name: NF10501_high_9
Description: NF10501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10501_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 11 - 262
Target Start/End: Complemental strand, 51679605 - 51679354
Alignment:
| Q |
11 |
ttggaggccttgaccctatttgaagtttctctgctaacattgatccattctcttccatgccattctgcacatgcataaatatatattgagatatggagct |
110 |
Q |
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| T |
51679605 |
ttggaggccttgaccctatttgaagtttctctgctaacattgatccattctcttccatgccattctgcacatgcataaatatatattgagatatggagct |
51679506 |
T |
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| Q |
111 |
atagagatatnnnnnnntatatatgatttatgaatttgatattgtaatacctttgcaacttcattgagattggaaattggtcttcctgcatacataataa |
210 |
Q |
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| T |
51679505 |
atagagatataaaaaaatatatatgatttatgaatttgatattgtaatacctttgcaacttcgttgagattggaaattggtcttcctgcatacataataa |
51679406 |
T |
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| Q |
211 |
ttttatagacatggttaaaaataagaatattacaagttggaatattgaatat |
262 |
Q |
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| T |
51679405 |
ttttatagacatggttaaaaataagaatattacaagttggaatattgaatat |
51679354 |
T |
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