View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10501_low_23 (Length: 319)
Name: NF10501_low_23
Description: NF10501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10501_low_23 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 23)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 19103438 - 19103135
Alignment:
| Q |
1 |
ttatggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19103438 |
ttatggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtt |
19103339 |
T |
|
| Q |
101 |
tcagctagagctaacaaggatgatgnnnnnnnggccagcagggggcacgtagaggagatcggaaaagaggaagagtggctaaattggcttaactcaaagc |
200 |
Q |
| |
|
|||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19103338 |
tcagctagggctaacaaggatgatgaaaaaaaggccagtagggggcacgtagaggagatcggaaaagaggaagagtggctaaattggcttaactcaaagc |
19103239 |
T |
|
| Q |
201 |
aaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacggtcttgaaaattcaggtcataa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19103238 |
aaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcacacggtcttgaaaattcaggtcataa |
19103139 |
T |
|
| Q |
301 |
tttt |
304 |
Q |
| |
|
|||| |
|
|
| T |
19103138 |
tttt |
19103135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 26088038 - 26088341
Alignment:
| Q |
1 |
ttatggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||| ||||||||||||||||| ||||||| |||||| |
|
|
| T |
26088038 |
ttatggaacactatacaatagttttcatgaactggaaagtgattatgaaaaacttggaagcactacaatggggatcaaatcttggagtgtagggccagtt |
26088137 |
T |
|
| Q |
101 |
tcagctagagctaacaaggatgatgnnnnnnnggccagcagggggcacgtagaggagatcggaaaagaggaagagtggctaaattggcttaactcaaagc |
200 |
Q |
| |
|
|||||| | | |||||| |||||| ||||| ||||| ||| |||||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26088138 |
tcagcttggaccaacaagaatgatgaaaaaaaggccaataggggacacatagaggagcttggaaaagaggaagagtggctaaattggcttaactcaaagg |
26088237 |
T |
|
| Q |
201 |
aaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacggtcttgaaaattcaggtcataa |
300 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
26088238 |
aaaatgagtccgtattgtatgtaagttttggaagtctaattaggcttgataatgctcagattgtagaaattgcacacggtctcgaaaattcaggtcataa |
26088337 |
T |
|
| Q |
301 |
tttt |
304 |
Q |
| |
|
|||| |
|
|
| T |
26088338 |
tttt |
26088341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 26111826 - 26112129
Alignment:
| Q |
1 |
ttatggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||| ||||||||||||||||| ||||||| |||||| |
|
|
| T |
26111826 |
ttatggaacactatacaatagttttcatgaactggaaagtgattatgaaaaacttggaagcactacaatggggatcaaatcttggagtgtagggccagtt |
26111925 |
T |
|
| Q |
101 |
tcagctagagctaacaaggatgatgnnnnnnnggccagcagggggcacgtagaggagatcggaaaagaggaagagtggctaaattggcttaactcaaagc |
200 |
Q |
| |
|
|||||| | | |||||| |||||| ||||| ||||| ||| |||||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26111926 |
tcagcttggaccaacaagaatgatgaaaaaaaggccaataggggacacatagaggagcttggaaaagaggaagagtggctaaattggcttaactcaaagg |
26112025 |
T |
|
| Q |
201 |
aaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacggtcttgaaaattcaggtcataa |
300 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
26112026 |
aaaatgagtccgtattgtatgtaagttttggaagtctaattaggcttgataatgctcagattgtagaaattgcacacggtctcgaaaattcaggtcataa |
26112125 |
T |
|
| Q |
301 |
tttt |
304 |
Q |
| |
|
|||| |
|
|
| T |
26112126 |
tttt |
26112129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 26128823 - 26129126
Alignment:
| Q |
1 |
ttatggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| ||| || |||| ||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
26128823 |
ttatggaacactatgcaatagttttcatgaactggaaagtgattatgaaaacatttgtaacactaccttggggatcaaatcttggagtgtaggaccagtt |
26128922 |
T |
|
| Q |
101 |
tcagctagagctaacaaggatgatgnnnnnnnggccagcagggggcacgtagaggagatcggaaaagaggaagagtggctaaattggcttaactcaaagc |
200 |
Q |
| |
|
||| | | |||||||||||||||| || | ||||| ||| |||||||| | |||||||||| ||| ||| ||||||||||||||||||||| |
|
|
| T |
26128923 |
tcatcatgggctaacaaggatgatgaaaacaaggggaataggggacacatagaggagcttggaaaagaggcagactggttaaattggcttaactcaaagc |
26129022 |
T |
|
| Q |
201 |
aaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacggtcttgaaaattcaggtcataa |
300 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
26129023 |
aaaatgagtccgtactgtatgtaagttttggaagtctaactaggcttgataatgctcagattgtagaaattgcacacggtctcgaaaattcaggtcataa |
26129122 |
T |
|
| Q |
301 |
tttt |
304 |
Q |
| |
|
|||| |
|
|
| T |
26129123 |
tttt |
26129126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 26186502 - 26186801
Alignment:
| Q |
5 |
ggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtttcag |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| ||||||| |||| |||| |||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
26186502 |
ggaacactatacaatagttttcatgaactggagagtgattataaaaaacttagtaacactatcttggggatcaaatcatggagtgtaggaccagtttcat |
26186601 |
T |
|
| Q |
105 |
ctagagctaacaaggatgatgnnnnnnnggccagcagggggcacgtagaggagatcggaaaagaggaagagtggctaaattggcttaactcaaagcaaaa |
204 |
Q |
| |
|
| |||||||||||||||| || | ||||| ||| | |||||| | | | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26186602 |
cattggctaacaaggatgatgaaaagaagggtaataggggacacatggaggagcttgcagaagaggaagagtggctaaattggcttaactcaaagcaaat |
26186701 |
T |
|
| Q |
205 |
tgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacggtcttgaaaattcaggtcataatttt |
304 |
Q |
| |
|
|||||| ||| ||||| |||||||||||||| ||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| |||||||||| |
|
|
| T |
26186702 |
tgagtccgtactgtatttaagttttggaagtgtaactaggcttgataatgctcagattgtagaaattgcacacggtcttgaaaattcagatcataatttt |
26186801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 2 - 304
Target Start/End: Original strand, 26191522 - 26191824
Alignment:
| Q |
2 |
tatggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagttt |
101 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||| |||| |||||| |||| |||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
26191522 |
tatggcacactatacaatagttttcatgaactagaaagtgaatatgagaaactttgtaatactacaagggggatcaaatcttggagtgtaggaccagttt |
26191621 |
T |
|
| Q |
102 |
cagctagagctaacaaggatgatgnnnnnnnggccagcagggggcacgtagaggagatcggaaaagaggaagagtggctaaattggcttaactcaaagca |
201 |
Q |
| |
|
||||| | ||||| |||||||||| || | ||||||| ||||||||| ||||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
26191622 |
cagcttgggctaaaaaggatgatgaaaagaagggtgataaggggcacatagaggagaatggaaaagtggcagagtggctaaattggcttaactcaaagca |
26191721 |
T |
|
| Q |
202 |
aaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacggtcttgaaaattcaggtcataat |
301 |
Q |
| |
|
||||||||||||| | |||||||| ||||||||| |||||||||| ||| |||| |||||||||| ||| | || ||||||||||||||||||||| |
|
|
| T |
26191722 |
aaatgagtctgtactttatgtaagctttggaagtttaactaggctaactcatgctcagcttgtagaaattgcacatgggcttgaaaattcaggtcataat |
26191821 |
T |
|
| Q |
302 |
ttt |
304 |
Q |
| |
|
||| |
|
|
| T |
26191822 |
ttt |
26191824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 26179339 - 26179642
Alignment:
| Q |
1 |
ttatggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||| |||| | |||| |||||| ||||||||||| ||||| |||||||||||||| |
|
|
| T |
26179339 |
ttatggaacactatacaatagttttcatgaacttgaaagtgattatgaaaaattaagtaacactacaatggggatcaaaacttggagtgtaggaccagtt |
26179438 |
T |
|
| Q |
101 |
tcagctagagctaacaaggatgatgnnnnnnnggccagcagggggcacgtagaggagatcggaaaagaggaagagtggctaaattggcttaactcaaagc |
200 |
Q |
| |
|
|||||| | |||||||||||| || ||||| ||||| ||| ||||||| | |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
26179439 |
tcagcttggactaacaaggatggtgaaaaaaaggccaaaaggggacacatagaggaacttggaaaagaggaagaatggctaaattggcttaactcaaagc |
26179538 |
T |
|
| Q |
201 |
aaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacggtcttgaaaattcaggtcataa |
300 |
Q |
| |
|
|||||||||||||||| |||||||||||||| || || |||| || ||| |||| |||||||||| || |||| |||||||| |||||||| || |
|
|
| T |
26179539 |
aaaatgagtctgtattatatgtaagttttggtagccttgttaggtttccgcatgctcagcttgtagaaattgcgcacgggcttgaaaactcaggtcaaaa |
26179638 |
T |
|
| Q |
301 |
tttt |
304 |
Q |
| |
|
|||| |
|
|
| T |
26179639 |
tttt |
26179642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 161 - 304
Target Start/End: Original strand, 26155604 - 26155747
Alignment:
| Q |
161 |
ggaaaagaggaagagtggctaaattggcttaactcaaagcaaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcaga |
260 |
Q |
| |
|
|||||||||| |||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
26155604 |
ggaaaagaggccgagtggttaaattggcttaacacaaagcaaaatgagtccgtattgtatgtaagttttggaagtctaactaggcttgataatgctcaga |
26155703 |
T |
|
| Q |
261 |
ttgtagaaatcgcatacggtcttgaaaattcaggtcataatttt |
304 |
Q |
| |
|
|||||||||| ||| ||||||| ||||||||||||||||||||| |
|
|
| T |
26155704 |
ttgtagaaattgcacacggtctcgaaaattcaggtcataatttt |
26155747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 26155459 - 26155583
Alignment:
| Q |
1 |
ttatggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||||||| ||||| |||||||||||||| |
|
|
| T |
26155459 |
ttatggaacactatacaatagttttcatgaactggaaagtgattatgaaaaacttagtaacactaccatggggatcaaaacttggagtgtaggaccagtt |
26155558 |
T |
|
| Q |
101 |
tcagctagagctaacaaggatgatg |
125 |
Q |
| |
|
||| | | |||||||||||||||| |
|
|
| T |
26155559 |
tcatcatgggctaacaaggatgatg |
26155583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 304
Target Start/End: Original strand, 26242661 - 26242959
Alignment:
| Q |
9 |
cactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtttcagctag |
108 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||| || ||| |||| |||||| | || |||||||| ||| |||| |||||||||||||| | |
|
|
| T |
26242661 |
cactatacaacagttttcatgaacttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcctg |
26242760 |
T |
|
| Q |
109 |
agctaacaaggatgatgnnnnnnnggccagcagggg--gcacgtagaggag-atcggaaaagaggaagagtggctaaattggcttaactcaaagcaaaat |
205 |
Q |
| |
|
||||||||||||||| ||| | ||||| |||| ||| || || |||||| || ||| | |||||||||||||||| ||||||||| |
|
|
| T |
26242761 |
ggctaacaaggatgataaaagaaaggcgaataggggacacacggagaaaagcataggaaaacagacagaattgctaaattggcttaacctgaagcaaaat |
26242860 |
T |
|
| Q |
206 |
gagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacggtcttgaaaattcaggtcataatttt |
304 |
Q |
| |
|
|||||||||||||||||||||||||| || | |||||| || ||| |||| |||||||||| || |||| |||||||||||||||||||||||| |
|
|
| T |
26242861 |
gagtctgtattgtatgtaagttttggcagccagactaggtttcctcatgctcagcttgtagaaattgctcacgggcttgaaaattcaggtcataatttt |
26242959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 26204153 - 26204254
Alignment:
| Q |
4 |
tggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtttca |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||||||||| || ||||||| |||||| |
|
|
| T |
26204153 |
tggaacactatacaatagttttcatgaactagaaagtgattatgagaaacttggtaaaactacaatagggatcaaatcttggagtataggaccggtttca |
26204252 |
T |
|
| Q |
104 |
gc |
105 |
Q |
| |
|
|| |
|
|
| T |
26204253 |
gc |
26204254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 26223791 - 26223892
Alignment:
| Q |
4 |
tggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtttca |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||||||||| || ||||||| |||||| |
|
|
| T |
26223791 |
tggaacactatacaatagttttcatgaactagaaagtgattatgagaaacttggtaaaactacaatagggatcaaatcttggagtataggaccggtttca |
26223890 |
T |
|
| Q |
104 |
gc |
105 |
Q |
| |
|
|| |
|
|
| T |
26223891 |
gc |
26223892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 304
Target Start/End: Original strand, 26251109 - 26251407
Alignment:
| Q |
9 |
cactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtttcagctag |
108 |
Q |
| |
|
|||||||||| |||||||||||||| |||| |||||| | || ||| |||| | |||| | || |||||||| ||| |||| ||||||||||| || | |
|
|
| T |
26251109 |
cactatacaacagttttcatgaacttgaaaatgattacgagaagctttgtaaaagtacaattggaatcaaatcatggagtgtcggaccagtttctgcctg |
26251208 |
T |
|
| Q |
109 |
agctaacaaggatgatgnnnnnnnggccagcagggggcacgtagaggagatc---ggaaaagaggaagagtggctaaattggcttaactcaaagcaaaat |
205 |
Q |
| |
|
|||||||||||||||| ||| | ||||| ||| | ||| | | | |||||| || ||| | ||| |||||||||||||| ||||||||| |
|
|
| T |
26251209 |
ggctaacaaggatgatgaaagaaaggcgaataggggacacatggagaaaagcttaggaaaacagacagaattgcttaattggcttaactcgaagcaaaat |
26251308 |
T |
|
| Q |
206 |
gagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacggtcttgaaaattcaggtcataatttt |
304 |
Q |
| |
|
||||| |||||||||||||||||||| || || ||||||||| ||| |||| |||||||||| ||| | || |||||||||||||||||||||||| |
|
|
| T |
26251309 |
gagtcagtattgtatgtaagttttggcagccttactaggcttcctcatgctcagcttgtagaaattgcacatgggcttgaaaattcaggtcataatttt |
26251407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 26302059 - 26302159
Alignment:
| Q |
2 |
tatggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagttt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||| |||||| || | || ||| |||| |||||||||||| |||||||||||||| |
|
|
| T |
26302059 |
tatggaacactatacaatagttttcatgaacttgaaagtgattatgtgaaacttagtcaaacaacaatgggaatcaaatcttggaatgtaggaccagttt |
26302158 |
T |
|
| Q |
102 |
c |
102 |
Q |
| |
|
| |
|
|
| T |
26302159 |
c |
26302159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 26302244 - 26302368
Alignment:
| Q |
180 |
taaattggcttaactcaaagcaaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacgg |
279 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| || || | ||| | ||| |||| |||||||||| ||| |||| |
|
|
| T |
26302244 |
taaattggcttaactcaaagcaaaatgagtctgtattgtatgtaagttttggcagccttgtttggcatcctcatgctcagcttgtagaaattgcacacgg |
26302343 |
T |
|
| Q |
280 |
tcttgaaaattcaggtcataatttt |
304 |
Q |
| |
|
||||||||||||||||||| |||| |
|
|
| T |
26302344 |
gcttgaaaattcaggtcatagtttt |
26302368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 304
Target Start/End: Original strand, 26297709 - 26298007
Alignment:
| Q |
9 |
cactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtttcagctag |
108 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||| |||||| ||| |||||| | || ||||| || ||| |||| |||||||||||||| | |
|
|
| T |
26297709 |
cactatacaacagttttcatgaacttgaaagtgattatgagaaactttttaaaactacaatcggaatcaagtcatggagtgtcggaccagtttcagcctg |
26297808 |
T |
|
| Q |
109 |
agctaacaaggatgatgnnnnnnnggccagcagggggcacgtagaggaga---tcggaaaagaggaagagtggctaaattggcttaactcaaagcaaaat |
205 |
Q |
| |
|
|||||||||||||||| ||| | ||||| ||| | ||| | | | |||||| | ||| | ||||||||||||||| || ||| ||||| |
|
|
| T |
26297809 |
ggctaacaaggatgatgaaagaaaggctaataggggacacattgagaaaagcttaggaaaacatacagaattgctaaattggcttaattcgaaggaaaat |
26297908 |
T |
|
| Q |
206 |
gagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacggtcttgaaaattcaggtcataatttt |
304 |
Q |
| |
|
|| ||||||||||||||||||||||| || | ||||||||| ||| |||| |||||||||| | | || |||||||||||||||||||||||| |
|
|
| T |
26297909 |
gaatctgtattgtatgtaagttttggcagctttactaggcttccttatgctcagcttgtagaaattgttcatgggcttgaaaattcaggtcataatttt |
26298007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 26204320 - 26204443
Alignment:
| Q |
180 |
taaattggcttaactcaaagcaaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacgg |
279 |
Q |
| |
|
||||||||||||| || ||| |||| |||||||| |||||||||||||||||||| || ||||||||| |||| ||||||| ||||| || | || |
|
|
| T |
26204320 |
taaattggcttaattctaaggaaaacgagtctgtgttgtatgtaagttttggaagccttactaggctttctcatgaacagattgctgaaatagctcatgg |
26204419 |
T |
|
| Q |
280 |
tcttgaaaattcaggtcataattt |
303 |
Q |
| |
|
|||||||||||| ||||||||||| |
|
|
| T |
26204420 |
tcttgaaaattctggtcataattt |
26204443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 26223958 - 26224081
Alignment:
| Q |
180 |
taaattggcttaactcaaagcaaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacgg |
279 |
Q |
| |
|
||||||||||||| || ||| |||| |||||||| |||||||||||||||||||| || ||||||||| |||| ||||||| ||||| || | || |
|
|
| T |
26223958 |
taaattggcttaattctaaggaaaacgagtctgtgttgtatgtaagttttggaagccttactaggctttctcatgaacagattgctgaaatagctcatgg |
26224057 |
T |
|
| Q |
280 |
tcttgaaaattcaggtcataattt |
303 |
Q |
| |
|
|||||||||||| ||||||||||| |
|
|
| T |
26224058 |
tcttgaaaattctggtcataattt |
26224081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 26260307 - 26260430
Alignment:
| Q |
180 |
taaattggcttaactcaaagcaaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacgg |
279 |
Q |
| |
|
|||||||||||||||| || | ||||| ||||| |||||||||||||||||||| | ||||||||| ||| |||| |||| ||||| || | || |
|
|
| T |
26260307 |
taaattggcttaactctaaccctaatgattctgtgttgtatgtaagttttggaagcttgactaggctttcttatgctcaggttgttgaaatagctcatgg |
26260406 |
T |
|
| Q |
280 |
tcttgaaaattcaggtcataattt |
303 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
26260407 |
acttgaaaattcaggtcataattt |
26260430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 26278167 - 26278258
Alignment:
| Q |
213 |
tattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacggtcttgaaaattcaggtcataatttt |
304 |
Q |
| |
|
||||||||||||| ||||| || || | ||||||| ||| |||| |||||||||| ||| |||| |||||||||||||||||||||||| |
|
|
| T |
26278167 |
tattgtatgtaagctttggcagccttattaggcttcctcatgctcagcttgtagaaattgcacacgggcttgaaaattcaggtcataatttt |
26278258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 26227484 - 26227530
Alignment:
| Q |
257 |
cagattgtagaaatcgcatacggtcttgaaaattcaggtcataattt |
303 |
Q |
| |
|
|||||||||||||| || | |||||||||||||||||||||||||| |
|
|
| T |
26227484 |
cagattgtagaaatagctcatggtcttgaaaattcaggtcataattt |
26227530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 26227412 - 26227461
Alignment:
| Q |
185 |
tggcttaactcaaagcaaaatgagtctgtattgtatgtaagttttggaag |
234 |
Q |
| |
|
|||||||| ||||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
26227412 |
tggcttaattcaaagccgaatgattctgtgttgtatgtaagttttggaag |
26227461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 26227252 - 26227356
Alignment:
| Q |
1 |
ttatggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtt |
100 |
Q |
| |
|
||||||||| ||| |||||| ||||| ||||| ||| ||||||||| || ||| |||| ||| ||||||||||| | ||| |||||||||||||| |
|
|
| T |
26227252 |
ttatggaactttatgcaatagctttcacgaacttgaaggtgattatgagaatctttacaagagcacaatggggatcaaagcatggagtgtaggaccagtt |
26227351 |
T |
|
| Q |
101 |
tcagc |
105 |
Q |
| |
|
||||| |
|
|
| T |
26227352 |
tcagc |
26227356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 44903506 - 44903812
Alignment:
| Q |
1 |
ttatggaacactatacaatagttttcatgaactggaaagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtt |
100 |
Q |
| |
|
|||||| ||| ||| |||||||||||||||||| ||||||||||||| ||| || |||| |||||| ||||||| || |||||| |||||||||||||| |
|
|
| T |
44903506 |
ttatgggacaatatgcaatagttttcatgaacttgaaagtgattatgagaaagttagtaaaactacaatggggattaagtcttggagtgtaggaccagtt |
44903605 |
T |
|
| Q |
101 |
tcagctagagctaacaaggatgatgnnnnnnnggccagcagggggcacgtagaggagatcgg---aaaagaggaagagtggctaaattggcttaactcaa |
197 |
Q |
| |
|
||| || | |||||||||| ||||| || || ||||| ||||| ||| ||| || ||||||| ||| | |||||||||||||||||||| |
|
|
| T |
44903606 |
tcaacttgggctaacaagggtgatgaacggaagggcaataggggacacgtggagaagaacgttgaaaaagagagagaattgctaaattggcttaactcaa |
44903705 |
T |
|
| Q |
198 |
agcaaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttgaaaatgatcagattgtagaaatcgcatacggtcttgaaaattcaggtca |
297 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| || |||| |||| ||| |||| |||||||||| ||| | || |||||||| |||||||| |
|
|
| T |
44903706 |
agcaaaatgagtctgtgttgtatgtaagttttggaagccttactaagctttttcatgctcagcttgtagaaattgcacatgggcttgaaaagtcaggtca |
44903805 |
T |
|
| Q |
298 |
taatttt |
304 |
Q |
| |
|
||||||| |
|
|
| T |
44903806 |
taatttt |
44903812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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