View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10501_low_28 (Length: 303)

Name: NF10501_low_28
Description: NF10501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10501_low_28
NF10501_low_28
[»] chr4 (21 HSPs)
chr4 (1-168)||(11702840-11703005)
chr4 (1-150)||(10385667-10385816)
chr4 (1-130)||(33400585-33400714)
chr4 (1-103)||(56089567-56089669)
chr4 (1-168)||(18859476-18859644)
chr4 (1-161)||(10247508-10247686)
chr4 (177-292)||(33400883-33401000)
chr4 (11-168)||(23652979-23653136)
chr4 (1-155)||(49640069-49640222)
chr4 (31-169)||(11560510-11560649)
chr4 (1-155)||(3734026-3734179)
chr4 (1-103)||(13978897-13978999)
chr4 (1-103)||(19928667-19928769)
chr4 (1-155)||(49636776-49636929)
chr4 (1-103)||(26703744-26703846)
chr4 (1-103)||(15850936-15851038)
chr4 (1-102)||(17670181-17670283)
chr4 (1-168)||(3719749-3719914)
chr4 (1-168)||(14701606-14701771)
chr4 (89-168)||(17670102-17670181)
chr4 (258-292)||(18859228-18859262)
[»] chr6 (21 HSPs)
chr6 (1-156)||(34502053-34502208)
chr6 (1-147)||(31262490-31262636)
chr6 (1-168)||(17696287-17696454)
chr6 (1-168)||(2330328-2330495)
chr6 (8-168)||(7560435-7560595)
chr6 (1-119)||(9314038-9314156)
chr6 (1-103)||(12746569-12746671)
chr6 (1-168)||(2330991-2331147)
chr6 (1-119)||(28117587-28117705)
chr6 (1-168)||(14969367-14969533)
chr6 (1-103)||(33679441-33679543)
chr6 (13-96)||(5618573-5618656)
chr6 (1-168)||(22920229-22920394)
chr6 (1-155)||(17231568-17231721)
chr6 (1-103)||(28894734-28894836)
chr6 (1-103)||(35027386-35027488)
chr6 (1-157)||(3827069-3827225)
chr6 (7-103)||(31123193-31123289)
chr6 (1-168)||(11410466-11410630)
chr6 (1-155)||(13095951-13096104)
chr6 (38-100)||(22464181-22464243)
[»] chr5 (23 HSPs)
chr5 (1-168)||(19685866-19686035)
chr5 (1-158)||(34653008-34653165)
chr5 (1-168)||(19689249-19689418)
chr5 (13-168)||(2453036-2453186)
chr5 (1-119)||(17944398-17944516)
chr5 (1-103)||(33920905-33921007)
chr5 (1-168)||(25185084-25185252)
chr5 (1-168)||(26547791-26547959)
chr5 (1-168)||(26551350-26551518)
chr5 (1-103)||(9690526-9690628)
chr5 (2-161)||(4732085-4732245)
chr5 (1-168)||(28562612-28562780)
chr5 (1-168)||(28566180-28566348)
chr5 (1-103)||(26337746-26337848)
chr5 (1-82)||(3194943-3195024)
chr5 (1-103)||(1810661-1810764)
chr5 (1-102)||(2500261-2500362)
chr5 (1-100)||(33321177-33321276)
chr5 (1-168)||(26726647-26726811)
chr5 (1-58)||(40800169-40800226)
chr5 (125-168)||(3194898-3194941)
chr5 (258-292)||(26547540-26547574)
chr5 (258-292)||(26551099-26551133)
[»] chr2 (16 HSPs)
chr2 (1-168)||(1503686-1503851)
chr2 (1-168)||(38326068-38326235)
chr2 (1-168)||(38326524-38326691)
chr2 (1-168)||(1506890-1507055)
chr2 (1-160)||(4577567-4577718)
chr2 (1-168)||(18011648-18011816)
chr2 (1-167)||(13518003-13518170)
chr2 (1-168)||(11059494-11059665)
chr2 (1-119)||(30719524-30719640)
chr2 (1-155)||(18938607-18938760)
chr2 (1-168)||(15719477-15719642)
chr2 (1-168)||(15704223-15704388)
chr2 (1-103)||(38316300-38316402)
chr2 (1-103)||(40678025-40678127)
chr2 (1-168)||(29435452-29435616)
chr2 (1-168)||(22592215-22592380)
[»] chr3 (29 HSPs)
chr3 (1-168)||(9157688-9157854)
chr3 (1-168)||(44508507-44508674)
chr3 (7-168)||(18882912-18883073)
chr3 (1-168)||(42354664-42354829)
chr3 (1-168)||(9154515-9154681)
chr3 (1-168)||(10963106-10963273)
chr3 (1-168)||(10966615-10966782)
chr3 (1-168)||(10959599-10959766)
chr3 (3-169)||(20536832-20536995)
chr3 (1-103)||(4250149-4250251)
chr3 (1-103)||(19868745-19868848)
chr3 (1-168)||(2783819-2783987)
chr3 (1-155)||(5887235-5887388)
chr3 (1-168)||(30158284-30158457)
chr3 (1-168)||(29233839-29234004)
chr3 (1-155)||(5897219-5897372)
chr3 (1-155)||(23374981-23375134)
chr3 (1-168)||(6173604-6173769)
chr3 (1-103)||(28327207-28327309)
chr3 (1-103)||(28330532-28330634)
chr3 (3-99)||(27054638-27054734)
chr3 (13-103)||(3305613-3305703)
chr3 (69-168)||(25888734-25888833)
chr3 (1-100)||(2279871-2279969)
chr3 (1-155)||(16314841-16314993)
chr3 (30-168)||(16415035-16415171)
chr3 (1-155)||(18495835-18495987)
chr3 (30-168)||(18516009-18516145)
chr3 (6-130)||(18551405-18551529)
[»] chr8 (20 HSPs)
chr8 (1-167)||(30645173-30645339)
chr8 (1-168)||(22653960-22654128)
chr8 (1-168)||(27863807-27863975)
chr8 (1-168)||(31981058-31981214)
chr8 (1-168)||(14187699-14187867)
chr8 (1-168)||(31984693-31984855)
chr8 (1-103)||(5827790-5827892)
chr8 (1-168)||(5963954-5964122)
chr8 (1-168)||(20262256-20262421)
chr8 (1-168)||(21048886-21049051)
chr8 (1-155)||(24434744-24434897)
chr8 (1-103)||(39660210-39660312)
chr8 (1-103)||(9466891-9466993)
chr8 (1-103)||(13331852-13331954)
chr8 (1-155)||(24444790-24444943)
chr8 (1-168)||(18696178-18696344)
chr8 (1-113)||(24903737-24903848)
chr8 (1-153)||(17543765-17543916)
chr8 (1-153)||(17013285-17013436)
chr8 (70-103)||(452908-452941)
[»] scaffold0214 (3 HSPs)
scaffold0214 (1-168)||(19756-19921)
scaffold0214 (1-168)||(13306-13472)
scaffold0214 (1-168)||(27322-27488)
[»] chr1 (16 HSPs)
chr1 (1-168)||(37641565-37641733)
chr1 (1-168)||(28918072-28918240)
chr1 (1-168)||(17903040-17903206)
chr1 (1-155)||(16839186-16839339)
chr1 (1-155)||(16849116-16849269)
chr1 (1-103)||(33898089-33898191)
chr1 (1-103)||(6195581-6195683)
chr1 (1-103)||(18392156-18392258)
chr1 (1-103)||(23441537-23441639)
chr1 (1-168)||(49716072-49716236)
chr1 (1-168)||(49719555-49719719)
chr1 (1-168)||(20964157-20964322)
chr1 (1-103)||(34552937-34553039)
chr1 (1-155)||(24200497-24200649)
chr1 (1-168)||(20981060-20981225)
chr1 (1-63)||(3087978-3088040)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-119)||(6985-7103)
[»] chr7 (24 HSPs)
chr7 (1-168)||(748294-748462)
chr7 (1-168)||(20100342-20100509)
chr7 (1-103)||(22083695-22083797)
chr7 (1-168)||(22256957-22257123)
chr7 (3-103)||(3541423-3541523)
chr7 (1-168)||(2349173-2349338)
chr7 (1-168)||(5826961-5827128)
chr7 (1-155)||(26182014-26182167)
chr7 (1-155)||(26460178-26460331)
chr7 (21-168)||(11825628-11825776)
chr7 (3-168)||(22232882-22233052)
chr7 (3-168)||(22253687-22253857)
chr7 (1-103)||(12803517-12803619)
chr7 (1-103)||(38431156-38431258)
chr7 (1-103)||(43548956-43549058)
chr7 (1-102)||(44018045-44018146)
chr7 (1-103)||(6964050-6964152)
chr7 (1-120)||(8397590-8397710)
chr7 (1-168)||(710270-710435)
chr7 (1-103)||(26152914-26153016)
chr7 (108-168)||(23467446-23467506)
chr7 (5-56)||(23467389-23467440)
chr7 (1-168)||(23599016-23599180)
chr7 (1-168)||(2251572-2251736)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-168)||(227051-227213)
[»] scaffold0401 (1 HSPs)
scaffold0401 (1-103)||(4022-4124)
[»] scaffold0083 (2 HSPs)
scaffold0083 (1-103)||(52882-52984)
scaffold0083 (1-103)||(29085-29187)
[»] scaffold0043 (1 HSPs)
scaffold0043 (3-103)||(13355-13455)
[»] scaffold0911 (1 HSPs)
scaffold0911 (1-103)||(4328-4428)
[»] scaffold0062 (2 HSPs)
scaffold0062 (1-168)||(68034-68199)
scaffold0062 (1-168)||(53135-53300)
[»] scaffold0067 (1 HSPs)
scaffold0067 (1-155)||(27074-27227)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-168)||(28913-29078)
[»] scaffold0012 (2 HSPs)
scaffold0012 (1-155)||(27132-27285)
scaffold0012 (30-168)||(31347-31483)
[»] scaffold0273 (1 HSPs)
scaffold0273 (34-103)||(19971-20040)
[»] scaffold0360 (2 HSPs)
scaffold0360 (30-138)||(2193-2300)
scaffold0360 (1-138)||(6019-6151)
[»] scaffold1048 (1 HSPs)
scaffold1048 (1-77)||(1192-1267)


Alignment Details
Target: chr4 (Bit Score: 133; Significance: 4e-69; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 11702840 - 11703005
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  11702840 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcatatgaaaagcaatgaacacaaattattctgaataaa 11702939  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||||||||||| |||||||||||||   ||||||||||||||||||||||||||||    
T  11702940 gactgaataatattgataataaagagagtttcaacta--cattcatatattacaataggtttatcatg 11703005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10385816 - 10385667
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  10385816 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaagcaatcatatgaaaagcaatgaacacaaataattctgaataaa 10385717  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatat 150  Q
    ||| || |||||||||||||||| ||||||||||||| | ||||||||||    
T  10385716 gactgaataatattgataataaagagagtttcaactactaattcatatat 10385667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 33400585 - 33400714
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||||||||||||||    
T  33400585 tcaattactaagatcaatttatgtgattgcaagaagctagggttaatagtcaagcaaacaatcatatgaaaagcaattaacataaataattctgaataaa 33400684  T
Q  101 gaccgactaatattgataataaaaagagtt 130  Q
    |||||| |||||||||||| ||| ||||||    
T  33400685 gaccgaataatattgataacaaagagagtt 33400714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 56089567 - 56089669
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  56089567 tcaattcctaagatcaatttatgtgattgaaagaagctagggttaatagtcatgcaaacaatcatacgaaaagcaatgaacacaaataattctgaataaa 56089666  T
Q  101 gac 103  Q
    |||    
T  56089667 gac 56089669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 18859644 - 18859476
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| |||| ||||  | ||||||||||||||||||| |||||||||||||    
T  18859644 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaatcaattatttgaaaagcaatgaacacaagtaattctgaataa 18859545  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || |||| || |||||||| ||||| ||||||| | ||||||||||||||||||||| ||||||    
T  18859544 agactgaataattttaataataaagagagtatcaactactaattcatatattacaataggttcatcatg 18859476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 10247686 - 10247508
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaat------------------cgtatgaaaagcaatgaaca 82  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||                  | ||||||| ||||||||||    
T  10247686 tcaattcctaagatcaatttatgtgattgtaagaagttagggttaatagtcatgcaaacaatgcaaacaatgcaaacaatcatatgaaaggcaatgaaca 10247587  T
Q  83 caaataattctgaataaagaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtt 161  Q
    || |||||||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  10247586 cagataattctgaataaagactgaataatattgataataaaaagagttttaactactgattcatatattacaataggtt 10247508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 33400883 - 33401000
Alignment:
Q  177 tcctgtatcccaatttcctccaaaacgtgatgtgctg--cggccagcttccccaacgtgaattccacttttgtgcatagctaactttcttatatatagga 274  Q
    ||||||||||||||||||||| ||| |||||||||||  |||| |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  33400883 tcctgtatcccaatttcctccgaaatgtgatgtgctgtgcggctagcttccccaacatgaattccaattttgtgcatagctagctttcttatatatagga 33400982  T
Q  275 atgtaacctagttccttt 292  Q
    ||||||||||||||||||    
T  33400983 atgtaacctagttccttt 33401000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 23653136 - 23652979
Alignment:
Q  11 agatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagaccgactaa 110  Q
    ||||||||| |  |||||| |||||| |||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||  || |||    
T  23653136 agatcaattaacatgattgaaagaagttaggtttaatagtcatgcaaacaatcataataaaagcaatgaacacaaataattctgaataaagattgaataa 23653037  T
Q  111 tattgataataaaaagagtttcaacta-ttgattcatatattacaataggtttatcatg 168  Q
     |||||||||||| |||| |||||||| ||| |||| ||||||||||||||| ||||||    
T  23653036 cattgataataaagagag-ttcaactacttggttcacatattacaataggttcatcatg 23652979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 49640069 - 49640222
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| | | ||||  ||||||||||||||||||||||||||||||||||||    
T  49640069 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatccgagcaattatatgaaaagcaatgaacacaaataattctgaataaa 49640167  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  49640168 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 49640222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 11560649 - 11560510
Alignment:
Q  31 aagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagaccgactaatattgataataaaaagagtt 130  Q
    |||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||  |  ||| |||||||||||| ||||||    
T  11560649 aagaagttagggttaatagtcatgcaaacaatcataataaaagcaatgaacacaaataattttgaataaagattgtataacattgataataaagagagtt 11560550  T
Q  131 tcaacta-ttgattcatatattacaataggtttatcatgt 169  Q
    ||||||| |||  ||| |||||||||||| || |||||||    
T  11560549 tcaactacttggatcacatattacaatagattcatcatgt 11560510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 3734179 - 3734026
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| ||||||||||||||||||||| || | | ||||  ||||||||||||||||||||||||||||||||||||    
T  3734179 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagttatccgagcaattatatgaaaagcaatgaacacaaataattctgaataaa 3734081  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  3734080 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 3734026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 13978999 - 13978897
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||  | |||||||| | | ||||||||||||||||||||    
T  13978999 tcaattcctaagatcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcagaagaaaagcattaagcacaaataattctgaataaa 13978900  T
Q  101 gac 103  Q
    |||    
T  13978899 gac 13978897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 19928769 - 19928667
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||  | |||||||| | | ||||||||||||||||||||    
T  19928769 tcaattcctaagatcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcagaagaaaagcattaagcacaaataattctgaataaa 19928670  T
Q  101 gac 103  Q
    |||    
T  19928669 gac 19928667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 49636776 - 49636929
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| ||||||||||||||||||||| || | | ||||  ||||||||||||||||||||||||||||||||||||    
T  49636776 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagttatacgagcaattatatgaaaagcaatgaacacaaataattctgaataaa 49636874  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  49636875 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 49636929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 26703744 - 26703846
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||||||||||| |||||| |||||||||| |||| ||||||| ||||||||| || |||||||| | | ||||||||||||||||||||    
T  26703744 tcaattcctaagatcaatttatatgattgaaagaagctagagttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 26703843  T
Q  101 gac 103  Q
    |||    
T  26703844 gac 26703846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 15851038 - 15850936
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| ||||||| ||||||||| || |||||||| | | ||||||||||| ||||||||    
T  15851038 tcaattcctaagataaatttatgtgattgaaagaagttagggttattagtcatacaaacaatcataagaaaagcattaagcacaaataattttgaataaa 15850939  T
Q  101 gac 103  Q
    |||    
T  15850938 gac 15850936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17670283 - 17670181
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgc-aaacaatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| | |||||||  | | ||||||||||||||||| ||||| |||||||    
T  17670283 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaaacaattatttaaaaagcaatgaacacaagtaattttgaataa 17670184  T
Q  100 aga 102  Q
    |||    
T  17670183 aga 17670181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 3719749 - 3719914
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | | | |||||||||||||||||||||||| ||| ||||  |||| ||| |||| ||||||| | ||||||||||||    
T  3719749 tcaattcctaatatcaattcatataaattcaagaagctagggttaatagtcatacaagcaattatatg-aaatcaataaacacaagtgattctgaataaa 3719847  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||  |||  || ||||| ||||||| | | ||||||||||||| ||||| ||||||    
T  3719848 gactgaataatattattaaataagagagtatcaactactaaatcatatattacaa-aggttcatcatg 3719914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 14701771 - 14701606
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | | | |||||||||||||||||||||||| ||| ||||  |||| |||||||| ||||||| | ||||||||||||    
T  14701771 tcaattcctaatatcaattcatataaattcaagaagctagggttaatagtcatacaagcaattatatg-aaagcaataaacacaagtgattctgaataaa 14701673  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||  |||  || ||||| | ||||| | | ||||||||||||| ||||| ||||||    
T  14701672 gactgaataatattattaaataagagagtattaactactaaatcatatattacaa-aggttcatcatg 14701606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 168
Target Start/End: Complemental strand, 17670181 - 17670102
Alignment:
Q  89 attctgaataaagaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||||||||||||||| || ||| ||| |||||||| ||||| ||||||| | ||||||||||||||||| ||| ||||||    
T  17670181 attctgaataaagactgaataacattaataataaagagagtatcaactactaattcatatattacaatacgttcatcatg 17670102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 18859262 - 18859228
Alignment:
Q  258 ctttcttatatataggaatgtaacctagttccttt 292  Q
    |||||||||||||||||||||||||||||||||||    
T  18859262 ctttcttatatataggaatgtaacctagttccttt 18859228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 1e-68; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 34502208 - 34502053
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34502208 tcaattcctaagatcaatttatgtgattgtaagaagctagggttaatagtcatgcaaacaatcatatgaaaagcaatgaacacaaataattctgaataaa 34502109  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaat 156  Q
    ||| || |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  34502108 gactgaataatattgataataaagagagtttcaactactgattcatatattacaat 34502053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 31262636 - 31262490
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31262636 tcaattcctaagatcaatttatgtgattgcaagaagttagagttaataatcatgcaaacaatcatatgaaaagcaatgaacacaaataattctgaataaa 31262537  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcata 147  Q
    |||||| ||| |||||||||||| |||||||||| || | |||||||    
T  31262536 gaccgaataaaattgataataaagagagtttcaaatactaattcata 31262490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 17696454 - 17696287
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||| || |||||||||| |||||||||||||||||| ||||||    
T  17696454 tcaatttctaagatcaatttatgtgattgcaagaagttagggttaatagtcatacaaacagtcatatgaaaagcgatgaacacaaataattctaaataaa 17696355  T
Q  101 gaccgactaat-attgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||| |||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||||    
T  17696354 gactgaataatcattgataataaagagag-ttcaactactgattcatatattacaataggttcatcatg 17696287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 2330495 - 2330328
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||| ||||||||||||||||| |||| ||||| |||| ||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||||    
T  2330495 tcaatttctaagatcaatttatgttattgaaagaatctagagttaatagtcatgcaaataatcatatgaaaaacaatgaacacaaataattatgaataaa 2330396  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||||||||||| |||| |||||||| |||| |||||||||||||||||| ||||||    
T  2330395 gactgaataatattgataataaagagagcttcaactactgatccatatattacaataggttcatcatg 2330328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 7560435 - 7560595
Alignment:
Q  8 ctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagaccgac 107  Q
    |||||||||||| || |||||| ||||||||||||||||| ||||| ||||||||| || ||||| || |||||| |||||||||||||||||||| ||     
T  7560435 ctaagatcaattaatatgattgaaagaagctagggttaattgtcatacaaacaatcataagaaaaacactgaacataaataattctgaataaagactgaa 7560534  T
Q  108 taatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||||||||||||||| ||||||||||||| ||||||| |||| |||||||||| ||||||    
T  7560535 taatattgataataaagagagtttcaactactgattcacatatcacaataggttcatcatg 7560595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 9314038 - 9314156
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  9314038 tcaattcctaagatcaatttatgtgattgcaataagctagggttaatagtcatgcaaacaatcatataaaaagcaatgaacataaataattctgaataaa 9314137  T
Q  101 gaccgactaatattgataa 119  Q
    ||| || | ||||||||||    
T  9314138 gactgaattatattgataa 9314156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12746671 - 12746569
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  12746671 tcaattcctaagatcaatttatgtgattgaaagaagctagggttaatagtcatgcaaacaatcatacgaaaagcaatgaacacaaataattctgaataaa 12746572  T
Q  101 gac 103  Q
    |||    
T  12746571 gac 12746569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 2331147 - 2330991
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||||||||||||| |||| ||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||| ||||        
T  2331147 tcaattcctaagatcaatttatgttattgaaagaagctaggatcaatagtcatgcaaacaatcatatgaaaagcaatgaacacaaataattatgaa---- 2331052  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
           |||||||||||||||| |||| |||||||| |||| |||||||||||||||||| ||||||    
T  2331051 -------taatattgataataaagagagcttcaactactgatccatatattacaataggttcatcatg 2330991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 28117705 - 28117587
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| |||||||||||||| |||||||||||||||||    
T  28117705 tcaattcctaaaatcaatttatgtgattgcaagaagctagggttaataatcatgaaaacaatcatataaaaagcaatgaacataaataattctgaataaa 28117606  T
Q  101 gaccgactaatattgataa 119  Q
    ||| || | ||||||||||    
T  28117605 gactgaattatattgataa 28117587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 14969533 - 14969367
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| |||| ||||  | ||||||||||||||||  | |||||||||||||    
T  14969533 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaagcaattatctgaaaagcaatgaaca--agtaattctgaataa 14969436  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  14969435 agactgaataacattaataataaagagagtatcaactactgattcatatattacaataggttcatcatg 14969367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33679441 - 33679543
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||    
T  33679441 tcaattcctaagataaatttatgtgattgaaagaagttagggttaatagtcatgcaaacaatcatacgaaaagcaatgaacacaaataattctaaataaa 33679540  T
Q  101 gac 103  Q
    |||    
T  33679541 gac 33679543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 5618573 - 5618656
Alignment:
Q  13 atcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaa 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  5618573 atcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcatatgaaaagcaataaacacaaataattatgaa 5618656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 22920394 - 22920229
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||| ||||||||||    
T  22920394 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatacaagcaattatatgaaaagcaatgaacacaaataactctgaataaa 22920296  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||  |||  || ||||| ||||||| | ||||||||||||||| ||||| ||||||    
T  22920295 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa-aggttcatcatg 22920229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 17231721 - 17231568
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| ||||||| |||||||||||||||| ||| ||||  ||||||| ||||||||||||| ||||||||||||||    
T  17231721 tcaattcctaatatcaattcatgtaatttcaagaagatagggttaatagtcatacaagcaattatatgaaa-gcaatgaacacaagtaattctgaataaa 17231623  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || ||| ||| |||||||| ||||| || |||| | |||||||||||||||    
T  17231622 gactgaataacattaataataaagagagtatcgactactaattcatatattacaa 17231568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 28894734 - 28894836
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| ||||||| ||||||||| || |||||||| | | ||||||||||||||||||||    
T  28894734 tcaattcctaagatcaatttatgtgattgaaagaagttagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 28894833  T
Q  101 gac 103  Q
    |||    
T  28894834 gac 28894836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 35027386 - 35027488
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||  |||||||| || |||||||| | | ||||||||||||||||||||    
T  35027386 tcaattcctaagatcaatttatgtgattgaaagaagctagggttagtagtcatataaacaatcataagaaaagcattaagcacaaataattctgaataaa 35027485  T
Q  101 gac 103  Q
    |||    
T  35027486 gac 35027488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 3827069 - 3827225
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| ||||||||||| |||||||||||||||| |||| ||||  ||| |||| |||| || ||||||||||||||||||    
T  3827069 tcaattcctaatatcaattcatgtaattgcaagaagttagggttaatagtcatacaaagcaattatataaaaaacaataaatacaaataattctgaataa 3827168  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaata 157  Q
    |||| || ||| ||| ||||| |||||||| ||||||| | ||||||||| |||||||    
T  3827169 agactgaataacattaataat-aaaagagtatcaactactaattcatataatacaata 3827225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 31123289 - 31123193
Alignment:
Q  7 cctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagac 103  Q
    ||||||||||||| |  |||||| ||||||||||||||||||||||||||||||||| ||  |||||||||||| ||||||||||||||||||||||    
T  31123289 cctaagatcaattaacatgattgaaagaagctagggttaatagtcatgcaaacaatcataataaaagcaatgaaaacaaataattctgaataaagac 31123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 11410630 - 11410466
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| |||||||||||||||||||||||| ||| ||||  |||| ||||||||| |||||| ||||||||||||||    
T  11410630 tcaattcctaatatcaattcatgtaatttcaagaagctagggttaatagtcatacaagcaattatatg-aaagcaatggacacaagtaattctgaataaa 11410532  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||| |||  |||| || ||||| ||||||| | ||||||||||||||| ||||| ||||||    
T  11410531 gactgaataacattattaat-aagagagtatcaactactaattcatatattacaa-aggttcatcatg 11410466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 13095951 - 13096104
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| ||||||| |||||||||||||||| ||| ||||  |||||||  ||||||| |||| ||||||||||||||    
T  13095951 tcaattcctaatatcaattcatgtaatttcaagaagttagggttaatagtcatacaagcaattatatgaaat-caatgaatacaagtaattctgaataaa 13096049  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || ||| |||  ||||||| ||||| ||||||| | |||||||||||||||    
T  13096050 gactgaataacattattaataaagagagtatcaactactaattcatatattacaa 13096104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 22464243 - 22464181
Alignment:
Q  38 tagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  22464243 tagggttaatagtcatgcaaacaatcatataaaaagcaatgaacataaataattctgaataaa 22464181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 6e-68; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 19686035 - 19685866
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtat--gaaaagcaatgaacacaaataattctgaata 98  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  19686035 tcaattcctaagatcaatttatgtgattgtaagaagctagggttaatagtcatgcaaacaatcatatatgaaaagcaatgaacacaaataattctgaata 19685936  T
Q  99 aagaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||||| || |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  19685935 aagactgaataatattgataataaagagagtttcaactactgattcatatattacaatagatttatcatg 19685866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 34653008 - 34653165
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34653008 tcaattcctaagatcaatttatgtgattgcaagaagttagggttaatagtcatgcaaacaatcatatgaaaagcaatgaacacaaataattctgaataaa 34653107  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaatag 158  Q
    ||| || |||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  34653108 gactgaataatattgataataaagagagtttcaactactaattcatatattacaatag 34653165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 19689418 - 19689249
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtat--gaaaagcaatgaacacaaataattctgaata 98  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  19689418 tcaattcctaagatcaatttatgtgattgtaagaagctagggttaatagtcatgcaaacaatcatatatgaaaagcaatgaacacaaataattctgaata 19689319  T
Q  99 aagaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||||| || |||||||||||||||| ||||||||||||| |||||||||||||||||||| || ||||||    
T  19689318 aagactgaataatattgataataaagagagtttcaactactgattcatatattacaatagattcatcatg 19689249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 2453186 - 2453036
Alignment:
Q  13 atcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagaccgactaata 112  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| ||    |||||||||||||||| |||||||||||||||||||||| || |||||    
T  2453186 atcaatttatgtggttgcaagaagttagggttaatagtcatgcaatca----tatgaaaagcaatgaatacaaataattctgaataaagactgaataata 2453091  T
Q  113 ttgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||    
T  2453090 ttgataat-aaaagagtttcaactactaattcatatattacaataggttcatcatg 2453036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 17944516 - 17944398
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  17944516 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcatataaaaagcaatgaacataaataattctgaataaa 17944417  T
Q  101 gaccgactaatattgataa 119  Q
    ||| || | ||||||||||    
T  17944416 gactgaattatattgataa 17944398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 33921007 - 33920905
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  33921007 tcaattcctaagatcaatttatgtgattgaaagaagctagggttaatagtcatgcaaacaatcatacgaaaagcaatgaacacaaataattctgaataaa 33920908  T
Q  101 gac 103  Q
    |||    
T  33920907 gac 33920905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 25185252 - 25185084
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||  ||| ||||| ||| ||||||||||||||||| || |||| |||||    
T  25185252 tcaattcctaaaatcaatttatgtgattgcaagaagctagggttattagtcatataaaacaatcatataaaaagcaatgaacacaagtatttctaaataa 25185153  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||  || ||||||| |||| ||| ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  25185152 agattgaataatattaataacaaagagagtatcaactactgattcatatattacaataggttcatcatg 25185084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 26547959 - 26547791
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| |||| ||||  | ||||||||||||||||||| |||||||||||||    
T  26547959 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaaacaattatctgaaaagcaatgaacacaagtaattctgaataa 26547860  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||| |||||||||||||| |||||||| ||||||    
T  26547859 agactgaataacattaataataaagagagtatcaactactgattcatatattaaaataggttcatcatg 26547791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 26551518 - 26551350
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| |||| ||||  | ||||||||||||||||||| |||||||||||||    
T  26551518 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaaacaattatctgaaaagcaatgaacacaagtaattctgaataa 26551419  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||| |||||||||||||| |||||||| ||||||    
T  26551418 agactgaataacattaataataaagagagtatcaactactgattcatatattaaaataggttcatcatg 26551350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9690628 - 9690526
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  9690628 tcaattcctaagatcaatttatgtgattgaaataagctagggttaatagtcatgcaaacaatcgtacgaaaagcaatgaacacaaataattatgaataaa 9690529  T
Q  101 gac 103  Q
    |||    
T  9690528 gac 9690526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 4732085 - 4732245
Alignment:
Q  2 caattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||| ||||||||||||||||| ||||||||||||||    
T  4732085 caattcctaatatcaattcatgtaattgcaagaagctagggttaatagtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataaa 4732184  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtt 161  Q
    ||| || ||| ||| |||||||| |||   ||||||| |||||||||||||||||||||||    
T  4732185 gactgaataagattaataataaagagaagatcaactactgattcatatattacaataggtt 4732245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 28562612 - 28562780
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| ||||  ||||| ||||||||||||||||||||| |||| ||||  | ||||||||||||||||||| |||||||||||||    
T  28562612 tcaattcctaatatcaattcatgtagttgcacgaagctagggttaatagtcatacaaagcaattatctgaaaagcaatgaacacaagtaattctgaataa 28562711  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||  ||||||| |||||||||||||||||||| || ||||||    
T  28562712 agactgaataacattaataataaagagaggatcaactactgattcatatattacaatagattcatcatg 28562780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 28566180 - 28566348
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| ||||  ||||| ||||||||||||||||||||| |||| ||||  | ||||||||||||||||||| |||||||||||||    
T  28566180 tcaattcctaatatcaattcatgtagttgcacgaagctagggttaatagtcatacaaagcaattatctgaaaagcaatgaacacaagtaattctgaataa 28566279  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||  ||||||| |||||||||||||||||||| || ||||||    
T  28566280 agactgaataacattaataataaagagaggatcaactactgattcatatattacaatagattcatcatg 28566348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 26337848 - 26337746
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||| || |||||||||| ||||||||||||||||||||||    
T  26337848 tcaattcctaagatcaatttatgtgattgaaagaaactagggttaatagtcattcatacaatcatacgaaaagcaataaacacaaataattctgaataaa 26337749  T
Q  101 gac 103  Q
    |||    
T  26337748 gac 26337746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3195024 - 3194943
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaaca 82  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  3195024 tcaattcctaagatcaatttatgtgattgcaagaagttagggttaatagtcatgcaaacaatcatatgaaaagcaatgaaca 3194943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 1810661 - 1810764
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgc-aaacaatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    |||||| ||||||||||||||||| |||| |||||| |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||    
T  1810661 tcaatttctaagatcaatttatgtaattgtaagaagttagggttaatagtcatgcaaaacaatcatatgaaaaacaatgaacacaaataattctcaataa 1810760  T
Q  100 agac 103  Q
    ||||    
T  1810761 agac 1810764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2500261 - 2500362
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| ||||||| ||||||||| || |||||||| | | |||||||| |||||||||||    
T  2500261 tcaattcctaagatcaatttatgtgattgaaagaagttagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaatatttctgaataaa 2500360  T
Q  101 ga 102  Q
    ||    
T  2500361 ga 2500362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 33321177 - 33321276
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| ||||||| ||||||||| || |||||||| | | ||||||||||| ||||||||    
T  33321177 tcaattcctaagatcaatttatgtgattgaaagaagttagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattttgaataaa 33321276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 26726811 - 26726647
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||| ||||||||||||| ||| ||||  ||||||| ||||| ||||||| | ||||||||||||    
T  26726811 tcaattcctaatatcaattcatataatt-caagaagctatggttaatagtcatacaagcaattatatgaaa-gcaataaacacaagtgattctgaataaa 26726714  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||  | |||||||  |||  || ||||| ||||||| | | ||||||||||||| ||||| ||||||    
T  26726713 gacttaataatattattaaataagagagtatcaactactaaatcatatattacaa-aggttcatcatg 26726647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40800169 - 40800226
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa 58  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| ||||    
T  40800169 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaa 40800226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 3194941 - 3194898
Alignment:
Q  125 agagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||    
T  3194941 agagtttcaaccattgattcatatattacaataggttcatcatg 3194898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 26547574 - 26547540
Alignment:
Q  258 ctttcttatatataggaatgtaacctagttccttt 292  Q
    |||||||||||||||||||||||||||||||||||    
T  26547574 ctttcttatatataggaatgtaacctagttccttt 26547540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 26551133 - 26551099
Alignment:
Q  258 ctttcttatatataggaatgtaacctagttccttt 292  Q
    |||||||||||||||||||||||||||||||||||    
T  26551133 ctttcttatatataggaatgtaacctagttccttt 26551099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 9e-67; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 1503686 - 1503851
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  1503686 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaagcaatcatatgaaaagcaatgaacacaaataattctgaataaa 1503785  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||||||||||| |||||||||||||   ||||||||||||||||||||| ||||||    
T  1503786 gactgaataatattgataataaagagagtttcaacta--cattcatatattacaataggttcatcatg 1503851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 38326235 - 38326068
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  38326235 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcatatcaaaagtaatgaacacaaataattctgaataaa 38326136  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||||||||||| | ||||||||||| ||||||||||||| ||||||||| ||||||    
T  38326135 gacggaataatattgataataaagaaagtttcaactactgattcatatattccaataggttcatcatg 38326068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 38326524 - 38326691
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  38326524 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcatatcaaaagtaatgaacacaaataattctgaataaa 38326623  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||||||||||| | ||||||||||| ||||||||||||| ||||||||| ||||||    
T  38326624 gacggaataatattgataataaagaaagtttcaactactgattcatatattccaataggttcatcatg 38326691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 1506890 - 1507055
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  1506890 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaagcaatcatatgaaaaacaatgaacacaaataattctgaataaa 1506989  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||||||||||| |||||||||||||   ||||||||||||||||||||| ||||||    
T  1506990 gactgaataatattgataataaagagagtttcaacta--cattcatatattacaataggttcatcatg 1507055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 4577718 - 4577567
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||      
T  4577718 tcaattcctaagatcaatttatgtgattgtaagaagatagggttaatagtcatgcaaacaattatatgaaaagcaatgaacacaaataattctgaata-- 4577621  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggt 160  Q
     || || |||||||||||||||||||||| |||||     ||| ||||||||||||||||    
T  4577620 -actgaataatattgataataaaaagagtgtcaac-----atttatatattacaataggt 4577567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 18011816 - 18011648
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| |||| |||   ||| ||||||||||||||||| ||||| | |||||    
T  18011816 tcaattcctaatatcaattcatgtaattgcaagaagctagggttaatagtcatacaaagcaactatataaaaagcaatgaacacaagtaattataaataa 18011717  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||| ||||| ||||||||||||||||| ||||||    
T  18011716 agactgaataacattaataataaagagagtatcaactactgatttatatattacaataggttcatcatg 18011648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 13518170 - 13518003
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| |||| ||||  | |||||||| |||||||||| ||||| |||||||    
T  13518170 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaatcaattatttgaaaagctatgaacacaagtaattttgaataa 13518071  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcat 167  Q
    |||| || ||| ||| |||||||| ||||  | ||||| ||||||||||||||||||||||| |||||    
T  13518070 agactgaataacattaataataaagagaggataaactactgattcatatattacaataggttcatcat 13518003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 11059665 - 11059494
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| |||| ||||  | |||||| |||||||||||| ||| |||||||||    
T  11059665 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaagcaattatctgaaaaacaatgaacacaagtaactctgaataa 11059566  T
Q  100 agaccgactaat---attgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||||   ||| |||||||| ||||| ||||||| |||||||| |||||||||||||| ||||||    
T  11059565 agactgaataataacattaataataaagagagtatcaactactgattcatttattacaataggttcatcatg 11059494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 30719640 - 30719524
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| ||| |||||||||||||  |||||||||||||||||    
T  30719640 tcaattcctaagatcaatttatgtgattgcaagaagttagggttaatagtcatgcaa--aatcatataaaaagcaatgaacttaaataattctgaataaa 30719543  T
Q  101 gaccgactaatattgataa 119  Q
     || || | ||||||||||    
T  30719542 aactgaattatattgataa 30719524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 18938760 - 18938607
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| | | ||||  ||||||||||||||||||||||||||||||||||||    
T  18938760 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatccgagcaattatatgaaaagcaatgaacacaaataattctgaataaa 18938662  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  18938661 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 18938607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 15719477 - 15719642
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||| |||||| ||||||| |||||||| ||||||| ||||||||||||||||  || ||||  ||| |||| |||||||||||| ||||||||||||||    
T  15719477 tcaactcctaatatcaattcatgtgatttcaagaagttagggttaatagtcatataagcaattatataaaaa-caatgaacacaagtaattctgaataaa 15719575  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||| ||| |||||||| ||||| ||||||| | ||||||||||||||| ||||| ||||||    
T  15719576 gactgaataacattaataataaagagagtatcaactactaattcatatattacaa-aggttcatcatg 15719642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 15704223 - 15704388
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| || |||| |||||||||||||||| ||| ||||  ||| |||| |||||||||||||||||||| ||||||    
T  15704223 tcaattcctaatatcaattcatgtaatttcaggaagttagggttaatagtcatacaagcaattatataaaaa-caatgaacacaaataattctaaataaa 15704321  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||| ||| |||||||| ||||| ||||||  | ||||||||||||||| ||||| ||||||    
T  15704322 gactgaataacattaataataaagagagtatcaacttctaattcatatattacaa-aggttcatcatg 15704388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 38316300 - 38316402
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||| || ||||| || | | ||||||||||||||||||||    
T  38316300 tcaattcctaagatcaatttatgtgattgaaagaagctacggttagtagtcatacaaacaatcataagaaaaacattaagcacaaataattctgaataaa 38316399  T
Q  101 gac 103  Q
    |||    
T  38316400 gac 38316402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 40678025 - 40678127
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| || |||||||| | | ||||||||||||||||||||    
T  40678025 tcaattcctagcatcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 40678124  T
Q  101 gac 103  Q
    |||    
T  40678125 gac 40678127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 29435616 - 29435452
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| |||||||||||||||||||||||| ||| ||||  |||| |||||||||||||||| ||||||||||||||    
T  29435616 tcaattcctaatatcaattcatgtaatttcaagaagctagggttaatagtcatacaagcaattatatg-aaagcaatgaacacaagtaattctgaataaa 29435518  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||  |||  |||| || ||| | ||||||| | ||||||||||||||| ||||| ||||||    
T  29435517 gactgaatagcattattaat-aagagaatatcaactactaattcatatattacaa-aggttcatcatg 29435452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 22592380 - 22592215
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||  |||||| || | | | |||||||||||||||||||||||| ||| ||||  |||| |||||||| ||||||  | ||||||||||||    
T  22592380 tcaattcctaatctcaattcatataaattcaagaagctagggttaatagtcatacaagcaattatatg-aaagcaataaacacatgtgattctgaataaa 22592282  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||  |||  || ||||| ||||||| | | ||||||||||||| ||||| ||||||    
T  22592281 gactgaataatattattaaataagagagtatcaactactaaatcatatattacaa-aggttcatcatg 22592215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 9157854 - 9157688
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9157854 tcaattcctaagatcaatttatgtgattgcaagaagttagggttactagtcatgcaaacaatcatatgaaaagcaatgaacacaaataattctgaataaa 9157755  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||||    
T  9157754 gactgaataatattgataataaagagag-ttcaactactgattcatatattacaataggttcatcatg 9157688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 44508674 - 44508507
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  44508674 tcaattcttaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcatatgaaaaacaatgaacacaaataattctgaataaa 44508575  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||  || |||||||||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||    
T  44508574 gattgaataatattgataataaagagagttttaactactgattcatatattacaataggttcatcatg 44508507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 7 - 168
Target Start/End: Complemental strand, 18883073 - 18882912
Alignment:
Q  7 cctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagaccga 106  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  18883073 cctaagatcaatttatgtgattgtaagaagctagggttaatagtcatgcaaacaatcatatgaaaagcaatgaacacaaataattctgaataaagactga 18882974  T
Q  107 ctaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
     |||||||||||||||| ||| ||||||||| |||||||||||||||||||| || ||||||    
T  18882973 ataatattgataataaagagattttcaactactgattcatatattacaatagattcatcatg 18882912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 42354664 - 42354829
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  42354664 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcatatgaaaagcaatgaacacaaatgattctgaataaa 42354763  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||||||||||| | | |||||||||   ||||||||||||||||||||| ||||||    
T  42354764 gactgaataatattgataataaagacaatttcaacta--cattcatatattacaataggttcatcatg 42354829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 9154681 - 9154515
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  9154681 tcaattcctaagatcaatttatgtgattgcaagaagttaggattactagtcatgcaaacaatcatatgaaaagcaatgaatacaaataattctgaataaa 9154582  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||||| |||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||| ||||||    
T  9154581 gaccgagtaatatcgataataaagaga-tttcaactactgattcatatattacaataggttcatcatg 9154515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 10963273 - 10963106
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| ||||||||  ||||||||||||||||||||  ||||||||||||||    
T  10963273 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaacaattatatgaaaagcaatgaacacacgtaattctgaataaa 10963174  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||| ||| |||||||| ||||| ||||||| ||||||||||||||||| ||||| ||||||    
T  10963173 gactgaataacattaataataaagagagtatcaactactgattcatatattacaaaaggttcatcatg 10963106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 10966782 - 10966615
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| ||||||||  ||||||||||||||||||||  ||||||||||||||    
T  10966782 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaacaattatatgaaaagcaatgaacacacgtaattctgaataaa 10966683  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||| ||| |||||||| ||||| ||||||| ||||||||||||||||| ||||| ||||||    
T  10966682 gactgaataacattaataataaagagagtatcaactactgattcatatattacaaaaggttcatcatg 10966615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 10959766 - 10959599
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| |||||| |||||||||||| |||||||| ||| ||||  ||||||||||||||||||||| ||||||||||||||    
T  10959766 tcaattcctaatatcaattcatgtaattgcacgaagctagggttgatagtcatacaagcaattatatgaaaagcaatgaacacaagtaattctgaataaa 10959667  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    | | || ||| ||| |||||||| ||||| ||||||| ||||||||||||||||| ||||| ||||||    
T  10959666 ggctgaataacattaataataaagagagtatcaactactgattcatatattacaaaaggttcatcatg 10959599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 20536832 - 20536995
Alignment:
Q  3 aattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaaga 102  Q
    ||||||||||||||||| || |||||| |||||| |||||||||||||||| ||||||||| || |||||||||||||||||||||||| ||||||||||    
T  20536832 aattcctaagatcaattaatatgattg-aagaagttagggttaatagtcatacaaacaatcataagaaaagcaatgaacacaaataattttgaataaaga 20536930  T
Q  103 ccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatgt 169  Q
    | |  |||||||||||||  ||||||||||||| | ||||||| ||||||| ||||||| |||||||    
T  20536931 ctgcataatattgataat--aaagagtttcaaccactgattcacatattaccataggttcatcatgt 20536995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4250251 - 4250149
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  4250251 tcaattcctaagatcaatttatgtgattgaaagaagttagggttaatagtcatgcaaacaatcatacgaaaagcaatgaacacaaataattctgaataaa 4250152  T
Q  101 gac 103  Q
    |||    
T  4250151 gac 4250149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 19868848 - 19868745
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||||||||||||||    
T  19868848 tcaattcctaagatcaatttatgtaattggaagaagctagggttaatagtcatgcaaagcaatcatatgaaaagcaacaaacacaaataattctgaataa 19868749  T
Q  100 agac 103  Q
    ||||    
T  19868748 agac 19868745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 2783987 - 2783819
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| ||||  ||||| ||||||||||||||||||||| |||| ||||  | ||||||||||||||||||| |||||||||||||    
T  2783987 tcaattcctaatatcaattcatgtagttgcacgaagctagggttaatagtcatacaaagcaattatctgaaaagcaatgaacacaagtaattctgaataa 2783888  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| ||| |||| ||||  ||||||| | |||||||||||||||||| || ||||||    
T  2783887 agactgaataacattaatactaaagagaggatcaactactcattcatatattacaatagattcatcatg 2783819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 5887235 - 5887388
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| | | ||||  ||||||||||||||||||||||||||||||||||||    
T  5887235 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatccgagcaattatatgaaaagcaatgaacacaaataattctgaataaa 5887333  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  5887334 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 5887388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 30158284 - 30158457
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaa-----taattctg 94  Q
    ||||||| ||| ||||||| |||| |||||| ||||||||||||||||||||| |||| ||||  | |||||||||||||||||||      ||||||||    
T  30158284 tcaattcataatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaagcaattatctgaaaagcaatgaacacaacacaagtaattctg 30158383  T
Q  95 aataaagaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||||||||| || ||| ||| |||||||| ||||| ||||||| ||||||||||||||||||||| | ||||||    
T  30158384 aataaagactgaataacattaataataaagagagtatcaactactgattcatatattacaatagggtcatcatg 30158457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 29233839 - 29234004
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| ||| ||||  |||||||| |||||||||||||||||||||||||||    
T  29233839 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatacaagcaattatatgaaaaacaatgaacacaaataattctgaataaa 29233937  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||  |||  |  ||||| ||||||| | ||||||||||||||| ||||| ||||||    
T  29233938 gactgaataatattattaaatacgagagtatcaactactaattcatatattacaa-aggttcatcatg 29234004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 5897219 - 5897372
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | |||  ||||||||||||||||||||||| | | ||||  ||||||||||||||||||||||||||||||||||||    
T  5897219 tcaattcctaatatcaattcatataattt-aagaagctagggttaatagtcatccgagcaattatatgaaaagcaatgaacacaaataattctgaataaa 5897317  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  5897318 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 5897372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 23374981 - 23375134
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| | | ||||  ||||||||||||||||||||||||||||||||||||    
T  23374981 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatacgagcaattatatgaaaagcaatgaacacaaataattctgaataaa 23375079  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
     || || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  23375080 aactgaataatattattaaataagagagtatcaactactaattcatatattacaa 23375134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 6173604 - 6173769
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| |||||||||||||||||||||||| ||||||||   ||| |||||||||||||||| | ||||||||||||    
T  6173604 tcaattcctaatatcaattcatgtaatttcaagaagctagggttaatagtcatacaaacaattaaatg-aaagcaatgaacacaagtgattctgaataaa 6173702  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||  |||  || ||||| ||||||| | | ||||||||||||| ||||| ||||||    
T  6173703 gactgaataatattattaaataagagagtatcaactactaaatcatatattacaa-aggttcatcatg 6173769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 28327309 - 28327207
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| || |||||||| | | ||||||||||||||||||||    
T  28327309 tcaattcctagcatcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 28327210  T
Q  101 gac 103  Q
    |||    
T  28327209 gac 28327207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 28330634 - 28330532
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| || |||||||| | | ||||||||||||||||||||    
T  28330634 tcaattcctagcatcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 28330535  T
Q  101 gac 103  Q
    |||    
T  28330534 gac 28330532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 27054734 - 27054638
Alignment:
Q  3 aattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||||||||||||||||||| |||||| |||||||| ||||||| ||||||||| || |||||||| | | |||||||||||||||||||    
T  27054734 aattcctaagatcaatttatgtgattgaaagaagttagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataa 27054638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 3305703 - 3305613
Alignment:
Q  13 atcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagac 103  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| || |||||||| | | |||||||||||||||||||||||    
T  3305703 atcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaagac 3305613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 25888734 - 25888833
Alignment:
Q  69 aaaagcaatgaacacaaataattctgaataaagaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| |||||||||||| ||||||||||||||||| || ||| ||| |||||||| ||||| ||||||| |||||||||||||||||||| || ||||||    
T  25888734 aaaaacaatgaacacaagtaattctgaataaagactgaataacattaataataaagagagtatcaactactgattcatatattacaatagattcatcatg 25888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2279871 - 2279969
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| |||||||||| ||||||||||||| ||  ||||   ||| |||||||||||||||||||||||||||||||    
T  2279871 tcaattcctaatatcaattcatgtaatttcaagaagctaaggttaatagtcatacaggcaattaaatg-aaagcaatgaacacaaataattctgaataaa 2279969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 16314841 - 16314993
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| ||| ||||  |||| |||||||| |||| || | ||||||||||||    
T  16314841 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatacaagcaattatatg-aaagcaataaacataagtgattctgaataaa 16314938  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | | |||||||| ||||    
T  16314939 gactgaataatattattaaataagagagtatcaactactaaatcatatatcacaa 16314993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 16415035 - 16415171
Alignment:
Q  30 caagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagaccgactaatattgataataaaaagagt 129  Q
    |||||||||||||||||||||||| ||| ||||  |||| |||||||| |||||||   ||||||||||||||| || |||||||  |||  || |||||    
T  16415035 caagaagctagggttaatagtcatacaagcaattatatg-aaagcaataaacacaagcgattctgaataaagactgaataatattattaaataagagagt 16415133  T
Q  130 ttcaactattgattcatatattacaataggtttatcatg 168  Q
     ||||||| | | ||||||||||||| ||||| ||||||    
T  16415134 atcaactactaaatcatatattacaa-aggttcatcatg 16415171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 18495835 - 18495987
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| ||| ||||  |||| |||||||| |||| || | ||||||||||||    
T  18495835 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatacaagcaattatatg-aaagcaataaacataagtgattctgaataaa 18495932  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | | |||||||| ||||    
T  18495933 gactgaataatattattaaataagagagtatcaactactaaatcatatatcacaa 18495987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 18516009 - 18516145
Alignment:
Q  30 caagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagaccgactaatattgataataaaaagagt 129  Q
    |||||||||||||||||||||||| ||| ||||  |||| |||||||| |||||||   ||||||||||||||| || |||||||  |||  || |||||    
T  18516009 caagaagctagggttaatagtcatacaagcaattatatg-aaagcaataaacacaagcgattctgaataaagactgaataatattattaaataagagagt 18516107  T
Q  130 ttcaactattgattcatatattacaataggtttatcatg 168  Q
     ||||||| | | ||||||||||||| ||||| ||||||    
T  18516108 atcaactactaaatcatatattacaa-aggttcatcatg 18516145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 18551529 - 18551405
Alignment:
Q  6 tcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagaccg 105  Q
    |||||||||||||| ||   |||| ||||||||||||||| ||| ||| ||||||||| || ||||| |||| | ||   |||||||||||||||||| |    
T  18551529 tcctaagatcaattaatacaattgaaagaagctagggttagtagccatacaaacaatcataagaaaatcaataagcatgtataattctgaataaagactg 18551430  T
Q  106 actaatattgataataaaaagagtt 130  Q
    | |  ||||||||||||| ||||||    
T  18551429 aatgttattgataataaagagagtt 18551405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 30645339 - 30645173
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  30645339 tcaattcctaagatcaatttatgtgattgtaagaagttagggttaatagtcatgcaaacaatcatatcaaaagcaatgaacacaaataattctgaataaa 30645240  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcat 167  Q
    ||| |  ||||||| |||||||| ||||||||||||||| ||||||||||||||||||||| |||||    
T  30645239 gactggataatattaataataaagagagtttcaactattaattcatatattacaataggttcatcat 30645173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 22654128 - 22653960
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||| ||||||||||||||||| |||||||||||||    
T  22654128 tcaattcctaatatcaattcatgtaattgcaagaagctagggttaatagtcatacaaagcaataatataaaaagcaatgaacacaagtaattctgaataa 22654029  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  22654028 agactgaataacattaataataaagagagtatcaactattgattcatatattacaataggttcatcatg 22653960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 27863807 - 27863975
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||| |||||||||||||    
T  27863807 tcaattcctaagatcaattcatgtaattgcaagaagctagggttaatagtcatacaaaacaatcatataaaaagcaatgaacacaagtaattctgaataa 27863906  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||| ||||||||||| ||||||||||| ||||||    
T  27863907 agactgaataacattaataataaagagagtatcaactactgattcatatagtacaataggttcatcatg 27863975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 31981214 - 31981058
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||||||||||||  |||||||| |||||||| |||||||||||||||||||||||        
T  31981214 tcaattcctaatatcaatttatgtgattgtaagaagctatggttaatagtcattgaaacaatcatatgaaaatcaatgaacacaaataattctgaa---- 31981119  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
           |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31981118 -------taatattgataataaaaagagtttcaactactgattcatatattacaataggtttatcatg 31981058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 14187867 - 14187699
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||||| |||||||| |||| ||||  ||| ||||||||||||||||| |||||||||||||    
T  14187867 tcaattcctaatatcaattcatgtaattgcaagaagttagggtttatagtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataa 14187768  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||| |||||||||||||||||||| |||||||||    
T  14187767 agactgaataacattaataataaagagagtatcaactactgattcatatattacaatagatttatcatg 14187699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 31984855 - 31984693
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||          ||||||    
T  31984855 tcaattcctaagatcaatttatgtgattgtaagaagctatggttaatagtcatgcaaccaatcatatgaaaagcaatgaataca----------aataaa 31984766  T
Q  101 gaccgactaatattgat-----aataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||||||||||     |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31984765 gactgaataatattgataataaaataaaaagagtttcaactactgattcatatattacaataggtttatcatg 31984693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5827892 - 5827790
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||    
T  5827892 tcaattcctaagattaatttatgtgattgaaagaagctagggttaatagtcaagcaaacaatcataagaaaagcaatgaacacaaataattctgaataaa 5827793  T
Q  101 gac 103  Q
    |||    
T  5827792 gac 5827790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 5964122 - 5963954
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| |||| ||||  | ||||||||||||||||||| |||||||||||||    
T  5964122 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaagcaattatctgaaaagcaatgaacacaagtaattctgaataa 5964023  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || |   ||| |||||| | ||||| ||||||| ||||||||||||||||||||| | ||||||    
T  5964022 agactgaatcgcattaataatacagagagtatcaactactgattcatatattacaataggatcatcatg 5963954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 20262421 - 20262256
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| ||||||| |||||||||||||||| ||| ||||  ||||||| ||||||||||||| ||||||||||||||    
T  20262421 tcaattcctaatatcaattcatgtaatttcaagaagttagggttaatagtcatacaagcaattatatgaaa-gcaatgaacacaagtaattctgaataaa 20262323  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||| ||| |||||||| ||||| ||||||| | ||||||||||||||| ||||| ||||||    
T  20262322 gactgaataacattaataataaagagagtatcaactactaattcatatattacaa-aggttcatcatg 20262256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 21049051 - 21048886
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| ||||||| |||||||||||||||| ||| ||||  ||||||| ||||||||||||| ||||||||||||||    
T  21049051 tcaattcctaatatcaattcatgtaatttcaagaagttagggttaatagtcatacaagcaattatatgaaa-gcaatgaacacaagtaattctgaataaa 21048953  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||| ||| |||||||| ||||| ||||||| | ||||||||||||||| ||||| ||||||    
T  21048952 gactgaataacattaataataaagagagtatcaactactaattcatatattacaa-aggttcatcatg 21048886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 24434897 - 24434744
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| | |  |||  ||||||||||||||||||||||||||||||||||||    
T  24434897 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatacgagtaattatatgaaaagcaatgaacacaaataattctgaataaa 24434799  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  24434798 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 24434744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39660210 - 39660312
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| ||||||| ||||||||| || |||||||| | | ||||||||||||||||||||    
T  39660210 tcaattcctaagatcaatttatgtgattgaaagaagttagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 39660309  T
Q  101 gac 103  Q
    |||    
T  39660310 gac 39660312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9466993 - 9466891
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| ||||||| ||||||||| || |||||||| | | ||||||||||| ||||||||    
T  9466993 tcaattcctaagatcaatttatgtgattgaaagaagttagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattatgaataaa 9466894  T
Q  101 gac 103  Q
    |||    
T  9466893 gac 9466891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 13331954 - 13331852
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||||| || |||||||| | | ||||||||||| ||||||||    
T  13331954 tcaattcctaagatcaatttatgtgattgaaagaagctagggttagtagtcatacgaacaatcataagaaaagcattaagcacaaataattatgaataaa 13331855  T
Q  101 gac 103  Q
    |||    
T  13331854 gac 13331852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 24444943 - 24444790
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| | |  |||  ||||||||| ||||||||||||||||||||||||||    
T  24444943 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatacgagtaattatatgaaaagaaatgaacacaaataattctgaataaa 24444845  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  24444844 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 24444790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 18696178 - 18696344
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaag-aagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| ||| |||| ||| |||||||||||||||| ||| ||||  ||| |||| |||||||||||||||||||| |||||    
T  18696178 tcaattcctaatatcaattcatgtaatttcaaggaagttagggttaatagtcatacaagcaattatataaaaa-caatgaacacaaataattctaaataa 18696276  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||  | ||||||||||||||| ||||| ||||||    
T  18696277 agactgaataacattaataataaagagagtatcaacttctaattcatatattacaa-aggttcatcatg 18696344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24903737 - 24903848
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | | | |||||||||||||||||||||||| ||| ||||  |||| |||||||| ||||||| | ||||||||||||    
T  24903737 tcaattcctaatatcaattcatataaattcaagaagctagggttaatagtcatacaagcaattatatg-aaagcaataaacacaagtgattctgaataaa 24903835  T
Q  101 gaccgactaatat 113  Q
    ||| || ||||||    
T  24903836 gactgaataatat 24903848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 17543916 - 17543765
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||| ||| ||||||| || | | | ||| |||||||||||||||||||| ||| ||||  ||||||| ||||| ||||||| | ||||||||||||    
T  17543916 tcaattcataatatcaattcatataaattcaataagctagggttaatagtcatacaagcaattatatgaaa-gcaataaacacaagtgattctgaataaa 17543818  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattac 153  Q
    ||| || |||||||  |||  || ||||| ||||||| | | |||||||||||    
T  17543817 gactgaataatattattaaataagagagtatcaactactaaatcatatattac 17543765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 17013285 - 17013436
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||| ||| ||||||| || | | | ||| |||||||||||||||||||| ||| ||||  ||||||| ||||| ||||||| | ||||||||||||    
T  17013285 tcaattcataatatcaattcatataaattcaataagctagggttaatagtcatacaagcaattatatgaaa-gcaataaacacaagtgattctgaataaa 17013383  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattac 153  Q
    ||| || || ||||  |||  || ||||| ||||||| | | |||||||||||    
T  17013384 gactgaatattattattaaataagagagtatcaactactaaatcatatattac 17013436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 452941 - 452908
Alignment:
Q  70 aaagcaatgaacacaaataattctgaataaagac 103  Q
    |||||||||||||||| |||||||||||||||||    
T  452941 aaagcaatgaacacaagtaattctgaataaagac 452908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 113; Significance: 3e-57; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 19921 - 19756
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||  |||||||||  ||||||||||||||||||| |||||    
T  19921 tcaattcctaagatcaatttatgtgattgtaagaagttagggttaatagtcatgcaaacaataatatgaaaag--atgaacacaaataattctggataaa 19824  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||  || |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||    
T  19823 gagtgaataatattgataataaagagagtttcaactactgattcatatattacaataggttcatcatg 19756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 13472 - 13306
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||||||| | ||||||||||||| || |||||    
T  13472 tcaattcctaagatcaatttatgtgattgtaagaagttagggttaatagtcatgcaaaaaatcatatgaaaagcagttaacacaaataattttggataaa 13373  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||    
T  13372 gactgaataatattgataat-aaaagagtttcaattactgattcatatattacaataggttcatcatg 13306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 27488 - 27322
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||||||| | ||||||||||||| || |||||    
T  27488 tcaattcctaagatcaatttatgtgattgtaagaagttagggttaatagtcatgcaaaaaatcatatgaaaagcagttaacacaaataattttggataaa 27389  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||    
T  27388 gactgaataatattgataat-aaaagagtttcaattactgattcatatattacaataggttcatcatg 27322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 37641733 - 37641565
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||| |||| ||||  | ||||||||||||||||||| |||||||||||||    
T  37641733 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaatagtcatacaaagcaattatctgaaaagcaatgaacacaagtaattctgaataa 37641634  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||| ||||||||||||||||||||||||||||||    
T  37641633 agactgaataacattaataataaagagagtatcaactactgattcatatattacaataggtttatcatg 37641565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 28918240 - 28918072
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaa-acaatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| |||||||||| | ||| || || |||||||||||||||||| ||| |||||  ||||||||||||||||||||| |||||||||||||    
T  28918240 tcaattcctaatatcaatttatttaatttcatgatgctagggttaatagtcatacaacacaattatatgaaaagcaatgaacacaagtaattctgaataa 28918141  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||| ||||||||||||||||| ||||| ||||||    
T  28918140 agactgaataacattaataataaagagagtatcaactactgattcatatattacaaaaggttcatcatg 28918072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 17903040 - 17903206
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| |||||||||||||||||||||||| |||  |||  ||||||| ||||||||||||| ||||||||||||||    
T  17903040 tcaattcctaatatcaattcatgtaatttcaagaagctagggttaatagtcatacaagaaattatatgaaa-gcaatgaacacaagtaattctgaataaa 17903138  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||| ||| ||||| || ||||| ||||||| | ||||||||||||||| | ||| ||||||    
T  17903139 gactgaataacattaataattaagagagtatcaactactaattcatatattacaaaatgttcatcatg 17903206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 16839186 - 16839339
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| | | ||||  ||||||||||||||||||||||||||||||||||||    
T  16839186 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatccgagcaattatatgaaaagcaatgaacacaaataattctgaataaa 16839284  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  16839285 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 16839339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 16849116 - 16849269
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| | | ||||  ||||||||||||||||||||||||||||||||||||    
T  16849116 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatccgagcaattatatgaaaagcaatgaacacaaataattctgaataaa 16849214  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  16849215 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 16849269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 33898191 - 33898089
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| || |||||||| | | ||||||||||||||||||||    
T  33898191 tcaattcctaacatcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 33898092  T
Q  101 gac 103  Q
    |||    
T  33898091 gac 33898089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6195683 - 6195581
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||| || |||||||  | | ||||||||||||||||||||    
T  6195683 tcaattcctaagatcaatttatgtgattgaaagaagccagggttagtagtcatacaaacaatcataagaaaagcgttaagcacaaataattctgaataaa 6195584  T
Q  101 gac 103  Q
    |||    
T  6195583 gac 6195581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18392258 - 18392156
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| || ||||| || | | ||||||||||||||||||||    
T  18392258 tcaatttctaagatcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcataagaaaaccattaagcacaaataattctgaataaa 18392159  T
Q  101 gac 103  Q
    |||    
T  18392158 gac 18392156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 23441537 - 23441639
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| || |||||||| | | ||||||||||||||||||||    
T  23441537 tcaattcctagcatcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 23441636  T
Q  101 gac 103  Q
    |||    
T  23441637 gac 23441639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 49716236 - 49716072
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| |||||||||||||||||||||||| ||| ||||  |||| |||||||||||||||| ||||||||||||||    
T  49716236 tcaattcctaatatcaattcatgtaatttcaagaagctagggttaatagtcatacaagcaattatatg-aaagcaatgaacacaagtaattctgaataaa 49716138  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||  |||  |||| || ||| | ||||||| | ||||||||||||||| ||||| ||||||    
T  49716137 gactgaatagcattattaat-aagagaatatcaactactaattcatatattacaa-aggttcatcatg 49716072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 49719719 - 49719555
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| |||||||||||||||||||||||| ||| ||||  |||| |||||||||||||||| ||||||||||||||    
T  49719719 tcaattcctaatatcaattcatgtaatttcaagaagctagggttaatagtcatacaagcaattatatg-aaagcaatgaacacaagtaattctgaataaa 49719621  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||  |||  |||| || ||| | ||||||| | ||||||||||||||| ||||| ||||||    
T  49719620 gactgaatagcattattaat-aagagaatatcaactactaattcatatattacaa-aggttcatcatg 49719555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 20964322 - 20964157
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||  |||| ||| |||||||||| ||||||||||||| ||| ||||   |||||| ||||||||||||||||||||||||||||    
T  20964322 tcaattcctaatatcaatacatgtaatttcaagaagctatggttaatagtcatacaagcaattaaatgaaa-gcaatgaacacaaataattctgaataaa 20964224  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||| |||  |||  || ||||| ||||||| | | ||||||||||||| ||||| ||||||    
T  20964223 gactgaataacattattaaataagagagtatcaactactaaatcatatattacaa-aggttcatcatg 20964157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 34552937 - 34553039
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||| ||  |||| || | | ||||||||||||||||||||    
T  34552937 tcaattactaagatcaatttatgtgattgaaagaaactagggttagtagtcatacaaacaatcataaaaaaaacattaagcacaaataattctgaataaa 34553036  T
Q  101 gac 103  Q
    |||    
T  34553037 gac 34553039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 24200497 - 24200649
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| ||| ||||  |||| |||||||| ||||||| | ||| ||||||||    
T  24200497 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatacaagcaattatatg-aaagcaataaacacaagtgattttgaataaa 24200594  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | | |||||||||||||    
T  24200595 gactgaataatattattaaataagagagtatcaactactaaatcatatattacaa 24200649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 20981225 - 20981060
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||| ||| ||||||| |||| ||| ||||||| |||||||||||||||| ||  ||||   ||| ||||||||||||||||||||||||||||| |    
T  20981225 tcaattcttaatatcaattcatgtaatttcaagaagttagggttaatagtcatacatgcaattaaatg-aaagcaatgaacacaaataattctgaatata 20981127  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||| |||  |||  || | ||| ||||||| | | ||||||||||||| ||||| ||||||    
T  20981126 gactgaataacattattaaataagatagtatcaactactaaatcatatattacaa-aggttcatcatg 20981060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3087978 - 3088040
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatc 63  Q
    |||||||||||||||||||||| || ||| |||||| |||||||| ||||||| |||||||||    
T  3087978 tcaattcctaagatcaatttatatggttgaaagaagttagggttattagtcatacaaacaatc 3088040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 7103 - 6985
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  7103 tcaatttctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcatataaaaagcaatgaacataaataattctgaataaa 7004  T
Q  101 gaccgactaatattgataa 119  Q
    ||| || | ||||||||||    
T  7003 gactgaattatattgataa 6985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 6e-43; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 748294 - 748462
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| ||||||||||||||||||||| |||||| |||| || || ||| |||| |||||||||||| |||||||||||||    
T  748294 tcaattcctaatatcaattcatgtaattgcaagaagctagggttaaaagtcatacaaagcagtcatataaaaaacaatgaacacaagtaattctgaataa 748393  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  748394 agacagaataacattaataataaagagagtatcaactactgattcatatattacaataggttcatcatg 748462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 20100509 - 20100342
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    |||||| |||| ||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||| ||||||||||||||||| |||||||||||||    
T  20100509 tcaatttctaatatcaattcatgtaattgcaagaagctagggttaatagtcatacaaagcaattatat-aaaagcaatgaacacaagtaattctgaataa 20100411  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  20100410 agactgaataacattaataataaagagagtatcaactactgattcatatattacaataggttcatcatg 20100342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 22083695 - 22083797
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  22083695 tcaattcctaagatcaatttatgtgattgcaagaagttagggttaatagtcatgcaaacaatcatataaaaagcaatgaacataaataattctgaataaa 22083794  T
Q  101 gac 103  Q
    |||    
T  22083795 gac 22083797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 22257123 - 22256957
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||| ||||||||||||||||| |||||||||||||    
T  22257123 tcaattcctaatatcaattcatgtaattgcaagaagctagggttaatagtcatacaaagcaattatataaaaagcaatgaacacaagtaattctgaataa 22257024  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || |||  || |||||||| ||||| |||||||   ||||||||||||||||||||| ||||||    
T  22257023 agactgaataacgttaataataaagagagtatcaacta--cattcatatattacaataggttcatcatg 22256957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 3541423 - 3541523
Alignment:
Q  3 aattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaaga 102  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||| ||||    
T  3541423 aattcctaagatcaatttatgtgattgaaagaagctagggttaatagtcattcaaacaatcatacgaaaagcaatgaacacaaataattctgaatgaaga 3541522  T
Q  103 c 103  Q
    |    
T  3541523 c 3541523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 2349338 - 2349173
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    |||||| |||| ||||||| |||| |||||||||||||||||||||||||||| |||| ||||   || ||||| ||||||||||| |||||||||||||    
T  2349338 tcaatttctaatatcaattcatgtaattgcaagaagctagggttaatagtcatacaaaacaat---ataaaaagaaatgaacacaagtaattctgaataa 2349242  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||| ||||| | ||||||||||||||||||||||    
T  2349241 agactgaataacattaataataaagagagtatcaactactgatttacatattacaataggtttatcatg 2349173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 5826961 - 5827128
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||| ||| ||||||| |||| |||||| ||||||| ||||||||||||| |||| ||||  | |||||| |||||||||||| |||||||||||||    
T  5826961 tcaattcataatatcaattcatgtaattgcacgaagctatggttaatagtcatacaaagcaattatttgaaaa-caatgaacacaagtaattctgaataa 5827059  T
Q  100 agaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| || ||| ||| |||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  5827060 agactgaataacattaataataaagagagtatcaactactgattcatatattacaataggttcatcatg 5827128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 26182167 - 26182014
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||| ||| ||||||| || | ||| |||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||    
T  26182167 tcaattcttaatatcaattcatataatt-caagaagctagggttaatagtcatacaagcaattatatgaaaagcaatgaacacaaataattctgaataaa 26182069  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  26182068 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 26182014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 26460331 - 26460178
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| | | ||||  ||||||||||||||||||||||||||||||||||||    
T  26460331 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatccgagcaattatatgaaaagcaatgaacacaaataattctgaataaa 26460233  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  26460232 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 26460178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 11825628 - 11825776
Alignment:
Q  21 atgtgattgcaagaagctagggttaatagtcatgcaaa-caatcgtatgaaaagcaatgaacacaaataattctgaataaagaccgactaatattgataa 119  Q
    |||| |||||| |||||||||||||||||||||  ||| ||||  | ||||||| ||||||||||| ||||||||||||||||  || ||| ||| ||||    
T  11825628 atgtaattgcacgaagctagggttaatagtcatataaaacaattatgtgaaaagtaatgaacacaagtaattctgaataaagattgaataacattaataa 11825727  T
Q  120 taaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||| ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  11825728 taaagagagtatcaactactgattcatatattacaataggttcatcatg 11825776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 22232882 - 22233052
Alignment:
Q  3 aattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgc-aaacaatcgtatgaaaagcaatgaacacaaataattctgaataaag 101  Q
    ||||||||| ||||||| |||| |||||||||||||||||||||||||||| | |||||||  ||| ||||||||||||||||| |||||||||||||||    
T  22232882 aattcctaatatcaattcatgtaattgcaagaagctagggttaatagtcatacaaaacaattatataaaaagcaatgaacacaagtaattctgaataaag 22232981  T
Q  102 accgactaatattgataataaaaagagtttcaact--att--gattcatatattacaataggtttatcatg 168  Q
    ||  | ||| ||| ||| |||| ||||| ||||||  |||   ||||||||||||||||||||| ||||||    
T  22232982 actaaataacattaatagtaaagagagtatcaactacattcatattcatatattacaataggttcatcatg 22233052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 22253857 - 22253687
Alignment:
Q  3 aattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgc-aaacaatcgtatgaaaagcaatgaacacaaataattctgaataaag 101  Q
    ||||||||| ||||||| |||| |||||||||||||||||||||||||||| | |||||||  ||| ||||||||||||||||| |||||||||||||||    
T  22253857 aattcctaatatcaattcatgtaattgcaagaagctagggttaatagtcatacaaaacaattatataaaaagcaatgaacacaagtaattctgaataaag 22253758  T
Q  102 accgactaatattgataataaaaagagtttcaact--att--gattcatatattacaataggtttatcatg 168  Q
    ||  | ||| ||| ||| |||| ||||| ||||||  |||   ||||||||||||||||||||| ||||||    
T  22253757 actaaataacattaatagtaaagagagtatcaactacattcatattcatatattacaataggttcatcatg 22253687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12803517 - 12803619
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||  |||||||| || |||||||| | | ||||||||||||||||||||    
T  12803517 tcaattcctaagatcaatttatgtgattgaaagaagctagggttagtagtcatataaacaatcataagaaaagcattaagcacaaataattctgaataaa 12803616  T
Q  101 gac 103  Q
    |||    
T  12803617 gac 12803619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 38431258 - 38431156
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| || |||||||| | | ||||||||||||||||||||    
T  38431258 tcaatttctaagatcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcataagaaaagcagtaagcacaaataattctgaataaa 38431159  T
Q  101 gac 103  Q
    |||    
T  38431158 gac 38431156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 43549058 - 43548956
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||||||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||||| || |||||||| | | ||||||||||| ||||||||    
T  43549058 tcaattcctaagttcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattttgaataaa 43548959  T
Q  101 gac 103  Q
    |||    
T  43548958 gac 43548956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 44018045 - 44018146
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| || |||||||| | | ||||||||||||||||||||    
T  44018045 tcaattcctagcatcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaa 44018144  T
Q  101 ga 102  Q
    ||    
T  44018145 ga 44018146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6964152 - 6964050
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| ||||||| ||||||||| || ||||| || | | ||| ||||||||||||||||    
T  6964152 tcaattcctaagatcaatttatgtgattgaaagaaggtagggttagtagtcatacaaacaatcataagaaaaacattaagcaccaataattctgaataaa 6964053  T
Q  101 gac 103  Q
    |||    
T  6964052 gac 6964050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8397710 - 8397590
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgc-aaacaatcgtatgaaaagcaatgaacacaaataattctgaataa 99  Q
    ||||||||||| ||||||| |||| |||||| |||||||||||||||| |||| | |||||||  | |||||| |||||||||||| |||||||||||||    
T  8397710 tcaattcctaatatcaattcatgtaattgcacgaagctagggttaataatcatacaaaacaattatctgaaaaacaatgaacacaagtaattctgaataa 8397611  T
Q  100 agaccgactaatattgataat 120  Q
    |||| || ||| ||| |||||    
T  8397610 agactgaataacattaataat 8397590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 710270 - 710435
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | | | |||||||||||||||||||||||| ||| ||||  |||| |||||||| ||||||| | ||||||||||||    
T  710270 tcaattcctaatatcaattcatataaattcaagaagctagggttaatagtcatacaagcaattatatg-aaagcaataaacacaagtgattctgaataaa 710368  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||  |||  || ||||| ||||||| | | ||||||||||||| ||||| ||||||    
T  710369 gactgaataatattattaaataagagagtatcaactactaaatcatatattacaa-aggttcatcatg 710435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 26153016 - 26152914
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| |||||||  ||| |||| ||  ||||||  | | ||||||||||| ||||||||    
T  26153016 tcaattcctaagatcaatttatgtgattgaaagaagttagggttagtagtcataaaaagaatcataaaaaaagcgttaagcacaaataattatgaataaa 26152917  T
Q  101 gac 103  Q
    |||    
T  26152916 gac 26152914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 23467446 - 23467506
Alignment:
Q  108 taatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| || ||||||    
T  23467446 taatattgataataaagagagtttcaactactgattcatatattacaatagattcatcatg 23467506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 23467389 - 23467440
Alignment:
Q  5 ttcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgca 56  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  23467389 ttcctaagatcaatttatgtgattgtaagaagttagggttaatagtcatgca 23467440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 23599016 - 23599180
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||| ||||||||||||| ||| ||||  ||||||  ||||| ||||||| | ||||||||||||    
T  23599016 tcaattcctaatatcaattcatataatt-caagaagctatggttaatagtcatacaagcaattatatgaag-gcaataaacacaagtgattctgaataaa 23599113  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || |||||||  |||  || ||||| ||||||| | | ||||||||||||| ||||| ||||||    
T  23599114 gactgaataatattattaaataagagagtatcaactactaaatcatatattacaa-aggttcatcatg 23599180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 2251736 - 2251572
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| ||||||||||||||||||||||||  || ||||  |||| |||||||| ||||||| | ||||||||||||    
T  2251736 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcataaaagcaattatatg-aaagcaataaacacaagtgattctgaataaa 2251639  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    | | || |||||||  |||  || ||||| ||||| | | | ||||||||||||| ||||| ||||||    
T  2251638 ggctgaataatattattaaataagagagtatcaaccactaaatcatatattacaa-aggttcatcatg 2251572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 227213 - 227051
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||          ||||||    
T  227213 tcaattcctaagatcaatttatgtgattgtaagaagctatggttaatagtcatgcaaccaatcatatgaaaagcaatgaataca----------aataaa 227124  T
Q  101 gaccgactaatattgat-----aataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||||||||||     |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  227123 gactgaataatattgataataaaataaaaagagtttcaactactgattcatatattacaataggtttatcatg 227051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4124 - 4022
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||||||    
T  4124 tcaattcctaagatcaatttatgtgattgaaagaagctagggttaatagtcatgcaaccaatcatacgaaaaccaatgaacacaaataattctgaataaa 4025  T
Q  101 gac 103  Q
    |||    
T  4024 gac 4022  T

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Target: scaffold0083 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 52984 - 52882
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| || |||||||  ||||||||||||||||||||||||    
T  52984 tcaattcctaagatcaatttatgtgattgaaagaagctaggattaatagtcatgcaaacaatcatacgaaaagctttgaacacaaataattctgaataaa 52885  T
Q  101 gac 103  Q
    |||    
T  52884 gac 52882  T

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Target: scaffold0083; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 29187 - 29085
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||||    
T  29187 tcaattcctaagatcaatttatgtgattgaaagaagctaggtttaatagtcatgcaatcaatcatatgaaaatctttgaacacaaataattctgaataaa 29088  T
Q  101 gac 103  Q
    |||    
T  29087 gac 29085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 13455 - 13355
Alignment:
Q  3 aattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaaga 102  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||    
T  13455 aattcctaagatcaatttatgtgattgaaagaagttagggttaatagtcatgcaaacaattatacaaaaagcaatgaacacaaataattctgaataaaga 13356  T
Q  103 c 103  Q
    |    
T  13355 c 13355  T

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Target: scaffold0911 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0911
Description:

Target: scaffold0911; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4428 - 4328
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| || |||||||||  | ||||||||||||||||||||    
T  4428 tcaattcctaagatcaatttatgtgattgaaagaagctagggttagtagtcatacaaacaatcataagaaaagcaa--agcacaaataattctgaataaa 4331  T
Q  101 gac 103  Q
    |||    
T  4330 gac 4328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 68034 - 68199
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    |||| |||||| ||||||| |||||||| ||||||| ||||||||||||||||  || ||||  ||| |||| |||||||||||| ||||||||||||||    
T  68034 tcaactcctaatatcaattcatgtgatttcaagaagttagggttaatagtcatataagcaattatataaaaa-caatgaacacaagtaattctgaataaa 68132  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||| ||| |||||||| ||||| ||||||| | ||||||||||||||| ||||| ||||||    
T  68133 gactgaataacattaataataaagagagtatcaactactaattcatatattacaa-aggttcatcatg 68199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 53135 - 53300
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||| || |||| |||||||||||||||| ||| ||||  ||| |||| |||||||||||||||||||| ||||||    
T  53135 tcaattcctaatatcaattcatgtaatttcaggaagttagggttaatagtcatacaagcaattatataaaaa-caatgaacacaaataattctaaataaa 53233  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || ||| ||| |||||||| ||||| ||||||  | ||||||||||||||| ||||| ||||||    
T  53234 gactgaataacattaataataaagagagtatcaacttctaattcatatattacaa-aggttcatcatg 53300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 27227 - 27074
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| | | ||||  | ||||||||||||||||||||||||||||||||||    
T  27227 tcaattcctaatatcaattcatataatt-caagaagctagggttaatagtcatactagcaattatctgaaaagcaatgaacacaaataattctgaataaa 27129  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | |||||||||||||||    
T  27128 gactgaataatattattaaataagagagtatcaactactaattcatatattacaa 27074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 28913 - 29078
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||| ||| ||||  |||| |||||||| ||||||| | ||||||||||||    
T  28913 tcaattcctaatatcaattcatataatttcaagaagctagggttaatagtcatacaagcaattatatg-aaagcaataaacacaagtgattctgaataaa 29011  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaataggtttatcatg 168  Q
    ||| || || ||||  |||  || ||||| ||||||| | | ||||||||||||| ||||| ||||||    
T  29012 gactgaatactattattaaataagagagtatcaactactaaatcatatattacaa-aggttcatcatg 29078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 27132 - 27285
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| || | | | ||||||| |||||||||||||||| ||| ||||  ||||||| ||||| ||||||| | ||||||||||||    
T  27132 tcaattcctaatatcaattcatataaattcaagaagttagggttaatagtcatacaagcaattatatgaaa-gcaataaacacaagtgattctgaataaa 27230  T
Q  101 gaccgactaatattgataataaaaagagtttcaactattgattcatatattacaa 155  Q
    ||| || |||||||  |||  || ||||| ||||||| | | |||||||||||||    
T  27231 gactgaataatattattaaataagagagtatcaactactaaatcatatattacaa 27285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 31347 - 31483
Alignment:
Q  30 caagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagaccgactaatattgataataaaaagagt 129  Q
    |||||||||||||||||||||||| ||| ||||  ||||||| ||||| ||||||| | ||||||||||||||| || |||||||  |||  || |||||    
T  31347 caagaagctagggttaatagtcatacaagcaattatatgaaa-gcaataaacacaagtgattctgaataaagactgaataatattattaaataagagagt 31445  T
Q  130 ttcaactattgattcatatattacaataggtttatcatg 168  Q
     ||||||| | | ||||||||||||| ||||| ||||||    
T  31446 atcaactactaaatcatatattacaa-aggttcatcatg 31483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 19971 - 20040
Alignment:
Q  34 aagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagac 103  Q
    |||||||||||| ||||||| ||||||||| || |||||||| | | |||||||||||||||||||||||    
T  19971 aagctagggttagtagtcatacaaacaatcataagaaaagcattaagcacaaataattctgaataaagac 20040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 2300 - 2193
Alignment:
Q  30 caagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaagaccgactaatattgataataaaaagagt 129  Q
    |||||||||| | |||||| |||| ||| ||||  ||||||| ||||||||||||| ||||||||||||||||| || ||| |||  ||||||| | |||    
T  2300 caagaagctatgattaataatcatacaagcaattatatgaaa-gcaatgaacacaactaattctgaataaagactgaataacattattaataaagaaagt 2202  T
Q  130 ttcaactat 138  Q
     ||||||||    
T  2201 atcaactat 2193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 6151 - 6019
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaatgaacacaaataattctgaataaa 100  Q
    ||||||||||| ||||||| |||| ||||    |||||| | |||||| |||| ||| ||||  ||||||| ||||| ||||||| ||||||||||||||    
T  6151 tcaattcctaatatcaattcatgtaattg----aagctatgattaataatcatacaagcaattatatgaaa-gcaataaacacaagtaattctgaataaa 6057  T
Q  101 gaccgactaatattgataataaaaagagtttcaactat 138  Q
    ||| || ||| |||  ||||||| | ||| ||||||||    
T  6056 gactgaataacattattaataaagaaagtatcaactat 6019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1048 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1267 - 1192
Alignment:
Q  1 tcaattcctaagatcaatttatgtgattgcaagaagctagggttaatagtcatgcaaacaatcgtatgaaaagcaat 77  Q
    ||||||||||| ||||||| || | ||| ||| |||||||||||||||||||| ||| ||||  |||||||||||||    
T  1267 tcaattcctaatatcaattcatataatt-caaaaagctagggttaatagtcatacaagcaattatatgaaaagcaat 1192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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