View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10501_low_49 (Length: 250)
Name: NF10501_low_49
Description: NF10501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10501_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 10 - 239
Target Start/End: Complemental strand, 4922013 - 4921784
Alignment:
| Q |
10 |
agatgaaaacttcaattttaattgatgatcctaagtaactttcataccattaatcattatctaatggtaacatatatataatttgcaaggctaatacaca |
109 |
Q |
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| T |
4922013 |
agatgaaaacttcaattttaattgatgatcctaagtaactttcataccattaatcattatctaatggtaacatatatataatttgcaaggctaatacaca |
4921914 |
T |
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| Q |
110 |
ctctattgaaaataagaaacgactaatctctcaccagttttccnnnnnnngtagcttgccttcctgctcgatgaattggctatgtatgcaagtttaacct |
209 |
Q |
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| T |
4921913 |
ctctattgaaaataagaaacgactaatctctcaccagttttcctttttttgtagcttgccttcctgctcgatgaattggctatgtatgcaagtttaacct |
4921814 |
T |
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| Q |
210 |
tcctcccagtcatgacaacgatgatcaaaa |
239 |
Q |
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| T |
4921813 |
tcctcccagtcatgacaacgatgatcaaaa |
4921784 |
T |
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