View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10501_low_51 (Length: 246)
Name: NF10501_low_51
Description: NF10501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10501_low_51 |
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Alignment Details
Target: chr2 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 15659070 - 15659285
Alignment:
| Q |
1 |
aaatttacatttcatttttagatttgttaaagaaatatttaatttcatattaaatnnnnnnn-tattttaaattgtgaatgaatttgaactgacaaatta |
99 |
Q |
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| T |
15659070 |
aaatttacatttcatttttagatttgttaaagaaatatttaatttcatattaaataaaaaaaatattttaaattgtgaatgaatttgaactgacaaatta |
15659169 |
T |
|
| Q |
100 |
atttggaagattatgtggaagacctgtttgattaattttgtcaaaaaaataataataaag-nnnnnnnnnnnngaaggaataataaagtgtttgattatt |
198 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
15659170 |
atttggaagagtatgtggaagacctgtttgattaattttgtcaaaaaaataataataaagtgtttttttttttgaaggaataataaagtgtttgattatt |
15659269 |
T |
|
| Q |
199 |
aaaatctcttgcatac |
214 |
Q |
| |
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|||||||||||||||| |
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|
| T |
15659270 |
aaaatctcttgcatac |
15659285 |
T |
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