View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10501_low_54 (Length: 244)
Name: NF10501_low_54
Description: NF10501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10501_low_54 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 32688398 - 32688621
Alignment:
| Q |
1 |
atacttcaatatgtgaagaagggaacttccaacattggaattatatatcctaaaaatgcagaagtttgcttgctatattcagattggtggtggtcatgaa |
100 |
Q |
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| T |
32688398 |
atacttcaatatgtgaagaagggaacttccaacattggaattatatatcctaaaaatgcagaagtttgcttgctatattcagattggtg-tggtcatgaa |
32688496 |
T |
|
| Q |
101 |
agtaatagcaaaacacagtagataatgcttttgtgtgtgggaaaatcctctgggcatcggacaaatagtttatggcagtggccaaatgtaaagtgaggtc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32688497 |
agtaatagcaaaacacagtagataatgcttttgtgtgtgggaaaatcctctgggcatcggacaaatagtttatggtggtggccaaatgtaaagtgaggtc |
32688596 |
T |
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| Q |
201 |
gagcatgttgttacaatgactatga |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
32688597 |
gagcatgttgttacaatgactatga |
32688621 |
T |
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