View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10501_low_57 (Length: 241)
Name: NF10501_low_57
Description: NF10501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10501_low_57 |
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Alignment Details
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 44573907 - 44574116
Alignment:
| Q |
19 |
catttaggggagaaattgtgtgtgcaccaatgtacattctcaacaaatgttctacacagagattataggagtggttccgaaagagacctgatctgggaga |
118 |
Q |
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| T |
44573907 |
catttaggggagaaattgtgtgtgcaccaatgtacattctcaacaaatgttctacacagagattataggagtggttccgaaagagacatgatctgggaga |
44574006 |
T |
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| Q |
119 |
aagctatcaatgaatcatttgaatacttttggtgcactttgttacaatcatgtgccttttcagnnnnnnncaaagttgtaggatatattcctttctaatg |
218 |
Q |
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| T |
44574007 |
aagctatcaatgaatcatttgaatacttttggtgcactttgttacaatcatgtgccttttcagagaaaaacaaagttgtaggatatattcctttctaatg |
44574106 |
T |
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| Q |
219 |
ctctttatgg |
228 |
Q |
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|||||||||| |
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| T |
44574107 |
ctctttatgg |
44574116 |
T |
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