View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10502_low_1 (Length: 446)

Name: NF10502_low_1
Description: NF10502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10502_low_1
NF10502_low_1
[»] chr5 (35 HSPs)
chr5 (120-204)||(2890966-2891050)
chr5 (120-204)||(7157490-7157574)
chr5 (120-204)||(35766582-35766666)
chr5 (94-204)||(17645303-17645413)
chr5 (120-204)||(5102695-5102779)
chr5 (120-204)||(6789606-6789690)
chr5 (120-204)||(12280804-12280888)
chr5 (120-204)||(13359473-13359557)
chr5 (120-204)||(25881530-25881614)
chr5 (120-204)||(35638787-35638871)
chr5 (94-182)||(5050116-5050204)
chr5 (119-204)||(17540283-17540368)
chr5 (120-177)||(36944259-36944316)
chr5 (90-204)||(37530737-37530851)
chr5 (120-204)||(15498668-15498752)
chr5 (120-204)||(16218300-16218384)
chr5 (120-204)||(24171388-24171472)
chr5 (120-204)||(29525313-29525397)
chr5 (120-204)||(36761085-36761169)
chr5 (120-204)||(41734261-41734345)
chr5 (120-204)||(42709334-42709418)
chr5 (120-196)||(13019017-13019093)
chr5 (90-204)||(34589918-34590032)
chr5 (120-204)||(76437-76521)
chr5 (120-204)||(10815086-10815170)
chr5 (120-204)||(12953824-12953908)
chr5 (120-204)||(24463540-24463624)
chr5 (120-204)||(27812993-27813077)
chr5 (119-193)||(20768871-20768945)
chr5 (120-196)||(1923970-1924046)
chr5 (143-204)||(3703498-3703559)
chr5 (123-196)||(7615002-7615075)
chr5 (120-196)||(20017306-20017382)
chr5 (144-196)||(3749366-3749418)
chr5 (120-156)||(11575645-11575681)
[»] chr3 (38 HSPs)
chr3 (124-204)||(4070843-4070923)
chr3 (124-204)||(42293004-42293084)
chr3 (120-199)||(42528053-42528132)
chr3 (119-204)||(51760493-51760578)
chr3 (119-204)||(25999162-25999246)
chr3 (120-204)||(6124734-6124818)
chr3 (120-191)||(52959315-52959386)
chr3 (93-204)||(51980728-51980839)
chr3 (120-204)||(19274753-19274837)
chr3 (120-204)||(32999649-32999733)
chr3 (120-204)||(8879387-8879471)
chr3 (124-204)||(12764698-12764778)
chr3 (308-356)||(42293216-42293264)
chr3 (93-204)||(9558852-9558963)
chr3 (123-204)||(54463448-54463529)
chr3 (120-204)||(17666825-17666909)
chr3 (124-204)||(50197998-50198078)
chr3 (120-182)||(48051017-48051079)
chr3 (93-204)||(52184819-52184930)
chr3 (119-204)||(43968344-43968429)
chr3 (120-204)||(8321423-8321507)
chr3 (120-204)||(12055507-12055591)
chr3 (120-204)||(30317936-30318020)
chr3 (119-191)||(30743019-30743091)
chr3 (120-204)||(34435967-34436051)
chr3 (120-204)||(41991676-41991760)
chr3 (120-204)||(51062933-51063017)
chr3 (93-196)||(6586261-6586364)
chr3 (123-204)||(2557894-2557975)
chr3 (120-196)||(32111560-32111636)
chr3 (123-204)||(35554605-35554686)
chr3 (91-192)||(46668335-46668436)
chr3 (120-204)||(36237859-36237943)
chr3 (120-191)||(12122179-12122250)
chr3 (119-196)||(32390114-32390191)
chr3 (123-196)||(40374508-40374581)
chr3 (120-156)||(41888832-41888868)
chr3 (308-356)||(48104775-48104823)
[»] chr7 (38 HSPs)
chr7 (124-204)||(42997541-42997621)
chr7 (124-204)||(3370476-3370556)
chr7 (120-204)||(21920788-21920872)
chr7 (120-204)||(30523946-30524030)
chr7 (120-204)||(46534431-46534515)
chr7 (119-204)||(981359-981444)
chr7 (120-193)||(28235308-28235381)
chr7 (144-204)||(43158184-43158244)
chr7 (120-195)||(6476949-6477024)
chr7 (120-204)||(25696056-25696140)
chr7 (120-204)||(46349876-46349960)
chr7 (120-204)||(28958114-28958198)
chr7 (120-191)||(4060375-4060446)
chr7 (89-204)||(28494268-28494383)
chr7 (138-204)||(42980871-42980937)
chr7 (119-204)||(14792109-14792194)
chr7 (120-204)||(27826732-27826816)
chr7 (120-196)||(40061186-40061262)
chr7 (120-204)||(42265265-42265349)
chr7 (120-204)||(42329015-42329099)
chr7 (120-195)||(43468011-43468086)
chr7 (143-195)||(47479832-47479884)
chr7 (122-204)||(29994208-29994290)
chr7 (119-196)||(31969466-31969543)
chr7 (95-196)||(9806589-9806690)
chr7 (120-196)||(37658115-37658191)
chr7 (120-196)||(39870021-39870097)
chr7 (120-204)||(35647439-35647523)
chr7 (120-204)||(46672529-46672613)
chr7 (124-191)||(31031899-31031966)
chr7 (120-196)||(35670354-35670430)
chr7 (119-191)||(42328169-42328242)
chr7 (119-204)||(46350828-46350913)
chr7 (308-356)||(30523767-30523814)
chr7 (120-204)||(43337656-43337740)
chr7 (120-204)||(46536145-46536229)
chr7 (124-204)||(46615671-46615751)
chr7 (120-204)||(48935258-48935342)
[»] chr4 (39 HSPs)
chr4 (120-204)||(53431653-53431737)
chr4 (119-204)||(30653283-30653368)
chr4 (120-204)||(51941126-51941210)
chr4 (120-195)||(24152699-24152774)
chr4 (93-199)||(28778552-28778658)
chr4 (124-204)||(25687013-25687093)
chr4 (119-198)||(40674769-40674849)
chr4 (120-190)||(44525944-44526014)
chr4 (123-204)||(37498229-37498310)
chr4 (119-204)||(47633836-47633921)
chr4 (120-204)||(2943644-2943728)
chr4 (120-204)||(49335183-49335267)
chr4 (119-204)||(6287859-6287944)
chr4 (120-204)||(6238211-6238295)
chr4 (120-204)||(43374618-43374702)
chr4 (120-204)||(54683620-54683704)
chr4 (123-204)||(44448473-44448554)
chr4 (119-172)||(55496061-55496114)
chr4 (152-204)||(7141135-7141187)
chr4 (120-204)||(19801855-19801939)
chr4 (120-204)||(33984111-33984195)
chr4 (120-204)||(55001736-55001820)
chr4 (120-191)||(39840200-39840271)
chr4 (120-191)||(53284030-53284101)
chr4 (120-178)||(52908430-52908487)
chr4 (120-196)||(1771840-1771916)
chr4 (119-204)||(19800948-19801033)
chr4 (120-196)||(30411252-30411328)
chr4 (144-204)||(40685825-40685885)
chr4 (119-193)||(28459634-28459708)
chr4 (120-191)||(32012570-32012641)
chr4 (120-196)||(19912696-19912772)
chr4 (308-353)||(34438305-34438350)
chr4 (123-204)||(36181362-36181443)
chr4 (120-156)||(2390310-2390346)
chr4 (120-204)||(20356693-20356777)
chr4 (120-204)||(37114426-37114510)
chr4 (120-156)||(43590557-43590593)
chr4 (120-204)||(45561308-45561392)
[»] chr8 (36 HSPs)
chr8 (120-204)||(2773575-2773659)
chr8 (120-204)||(41355634-41355718)
chr8 (120-195)||(3512494-3512569)
chr8 (131-204)||(34903370-34903443)
chr8 (120-195)||(24804488-24804563)
chr8 (144-204)||(7303365-7303425)
chr8 (120-204)||(35057293-35057377)
chr8 (308-356)||(41788981-41789029)
chr8 (123-193)||(16786534-16786604)
chr8 (119-204)||(284840-284925)
chr8 (119-204)||(630952-631037)
chr8 (119-204)||(816764-816849)
chr8 (119-204)||(5574624-5574709)
chr8 (145-206)||(16785863-16785924)
chr8 (155-204)||(21266856-21266905)
chr8 (119-204)||(22215133-22215218)
chr8 (120-196)||(29051173-29051249)
chr8 (87-189)||(39733716-39733818)
chr8 (120-204)||(43800761-43800845)
chr8 (143-206)||(16785663-16785726)
chr8 (120-191)||(35160275-35160346)
chr8 (120-196)||(18146365-18146441)
chr8 (119-204)||(20697498-20697583)
chr8 (120-196)||(40532080-40532156)
chr8 (120-196)||(45069819-45069895)
chr8 (120-204)||(14911788-14911872)
chr8 (120-195)||(53472-53546)
chr8 (124-191)||(17121842-17121909)
chr8 (120-191)||(38746962-38747033)
chr8 (120-196)||(12208829-12208905)
chr8 (120-196)||(12453257-12453333)
chr8 (119-204)||(36859250-36859335)
chr8 (119-195)||(41356312-41356388)
chr8 (120-204)||(25100207-25100291)
chr8 (139-191)||(35398012-35398064)
chr8 (120-204)||(40529524-40529608)
[»] chr2 (32 HSPs)
chr2 (120-204)||(6432193-6432277)
chr2 (120-204)||(10361416-10361500)
chr2 (124-204)||(45376936-45377016)
chr2 (22-93)||(13512642-13512713)
chr2 (120-204)||(42097904-42097988)
chr2 (124-204)||(35422070-35422150)
chr2 (123-204)||(43568389-43568470)
chr2 (120-204)||(1876025-1876109)
chr2 (92-204)||(34245241-34245353)
chr2 (120-191)||(36936078-36936149)
chr2 (93-204)||(3147443-3147554)
chr2 (119-196)||(39532084-39532161)
chr2 (119-204)||(8875695-8875780)
chr2 (315-356)||(10361637-10361678)
chr2 (119-194)||(10247387-10247460)
chr2 (120-204)||(12160906-12160990)
chr2 (120-204)||(30523632-30523716)
chr2 (120-204)||(39241153-39241237)
chr2 (120-204)||(42519737-42519821)
chr2 (121-204)||(7454556-7454639)
chr2 (120-196)||(18109715-18109791)
chr2 (120-193)||(43496185-43496258)
chr2 (124-204)||(5774120-5774200)
chr2 (124-204)||(14958147-14958227)
chr2 (120-182)||(11018046-11018108)
chr2 (158-204)||(40788756-40788802)
chr2 (124-196)||(40862204-40862276)
chr2 (120-204)||(16496608-16496692)
chr2 (120-204)||(28014488-28014572)
chr2 (120-156)||(28125046-28125082)
chr2 (120-156)||(38245940-38245976)
chr2 (120-156)||(38928604-38928640)
[»] chr1 (30 HSPs)
chr1 (120-204)||(2459638-2459722)
chr1 (120-204)||(38058772-38058856)
chr1 (123-204)||(44277957-44278038)
chr1 (124-204)||(28343716-28343796)
chr1 (120-204)||(41865310-41865394)
chr1 (120-204)||(46742479-46742563)
chr1 (120-193)||(2937360-2937433)
chr1 (119-204)||(36739575-36739660)
chr1 (120-196)||(5698531-5698606)
chr1 (124-204)||(11332869-11332949)
chr1 (124-204)||(11490890-11490970)
chr1 (120-204)||(46315680-46315764)
chr1 (97-193)||(25365760-25365856)
chr1 (92-204)||(28955547-28955659)
chr1 (123-193)||(9423058-9423128)
chr1 (120-182)||(47326598-47326660)
chr1 (124-193)||(31657103-31657172)
chr1 (123-204)||(38624094-38624175)
chr1 (124-204)||(28314846-28314926)
chr1 (120-204)||(30358097-30358181)
chr1 (120-204)||(33076628-33076711)
chr1 (91-195)||(35179814-35179918)
chr1 (120-204)||(39325634-39325718)
chr1 (120-191)||(27747630-27747701)
chr1 (120-191)||(50586184-50586255)
chr1 (120-204)||(38815541-38815625)
chr1 (124-204)||(45900196-45900276)
chr1 (120-196)||(5698149-5698225)
chr1 (119-156)||(23259107-23259144)
chr1 (124-196)||(42628218-42628290)
[»] scaffold1391 (1 HSPs)
scaffold1391 (123-204)||(1487-1568)
[»] chr6 (16 HSPs)
chr6 (123-204)||(6834038-6834119)
chr6 (120-204)||(25023447-25023531)
chr6 (120-191)||(20645681-20645752)
chr6 (93-193)||(21459018-21459118)
chr6 (93-204)||(12130477-12130588)
chr6 (120-204)||(18801723-18801807)
chr6 (124-204)||(20992257-20992337)
chr6 (120-204)||(24119231-24119315)
chr6 (120-196)||(18368734-18368810)
chr6 (124-204)||(13756312-13756392)
chr6 (132-204)||(21778078-21778150)
chr6 (120-191)||(22707314-22707385)
chr6 (120-196)||(1789810-1789886)
chr6 (120-204)||(21860257-21860341)
chr6 (120-156)||(24159261-24159297)
chr6 (120-156)||(32562451-32562487)
[»] scaffold0007 (1 HSPs)
scaffold0007 (120-204)||(157607-157691)
[»] scaffold0115 (2 HSPs)
scaffold0115 (120-196)||(4172-4248)
scaffold0115 (120-196)||(11912-11988)
[»] scaffold0330 (1 HSPs)
scaffold0330 (120-204)||(7014-7098)
[»] scaffold0076 (1 HSPs)
scaffold0076 (120-204)||(14183-14267)
[»] scaffold0060 (1 HSPs)
scaffold0060 (120-204)||(57841-57925)
[»] scaffold0039 (1 HSPs)
scaffold0039 (120-156)||(76267-76303)


Alignment Details
Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 2891050 - 2890966
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||| ||||||||||||| ||||    
T  2891050 tagcttatagtttgttggactaacttataagcttgttggatgaaaatgtgatgtgtttgataataaacttttctcacgagcttat 2890966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 7157574 - 7157490
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  7157574 tagcttatagcttgttggactaacttataagcttgttggatgaaaacgtgatgcgtttggtaacaagcttttctcacgagcttat 7157490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 35766582 - 35766666
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| || ||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  35766582 tagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttat 35766666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 17645303 - 17645413
Alignment:
Q  94 ggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttct 193  Q
    ||||||||||||||||||        |||||||||| ||||| || || |||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  17645303 ggctgtgtttggtaacataaataagctagcttatagcttgttagattagcttataagttcgttggatgaaaacgtgacgtgtttggtaacaagcttttct 17645402  T
Q  194 cacgagtttat 204  Q
    || ||| ||||    
T  17645403 catgagcttat 17645413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 5102779 - 5102695
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||| ||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||| ||| || ||||||||| ||| ||||    
T  5102779 tagcgtatagattgttggactagcttataagtttgttggatcaaaacatgatgtgtttgataacaaacttttctcatgagcttat 5102695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 6789690 - 6789606
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  6789690 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 6789606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 12280804 - 12280888
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||||| || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  12280804 tagcttatagtttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 12280888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 13359557 - 13359473
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||| ||||| |||||||| || |||||||| ||||| ||||||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  13359557 tagcatatagcttgttggattagcttataagcttgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 13359473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 25881530 - 25881614
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| ||||| || || |||||||| | ||||||||||||||||| ||||||||||| || ||||||||| ||| ||||    
T  25881530 tagcttatagcttgttagattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaaacttttctcatgagcttat 25881614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 35638787 - 35638871
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||||| ||||||||||| | ||| |||||||| |||  ||||||| ||| |||||||| ||||||| ||||    
T  35638787 tagcttatagtttgttggattaacttataagctcgttagatgaaaatgtggcgtgtttgataacaagcttttttcacgagcttat 35638871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 5050204 - 5050116
Alignment:
Q  94 ggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaa 182  Q
    ||||||||||||||||||        |||||||||| |||||||| || |||||||| | ||||||||||||||||| |||||||||||    
T  5050204 ggctgtgtttggtaacataaataagctagcttatagcttgttggattagcttataagctcgttggatgaaaacgtgacgtgtttggtaa 5050116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 17540283 - 17540368
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||| |||||||| || |||||||| | ||||||| ||||||||| ||||||||||| || ||||| ||| ||| ||||    
T  17540283 ttagcttatagcttgttggattagcttataagctcgttggattaaaacgtgacgtgtttggtaacaaacttttttcatgagcttat 17540368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 36944316 - 36944259
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgttt 177  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||| |||| |||||    
T  36944316 tagcttatagcttgttagactaacttataagcttgttggatgaaaacatgatatgttt 36944259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 37530851 - 37530737
Alignment:
Q  90 cataggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctt 189  Q
    |||||||||||||||||||||         |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| ||||||    
T  37530851 cataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagctt 37530752  T
Q  190 ttctcacgagtttat 204  Q
    || ||| ||| ||||    
T  37530751 ttttcatgagcttat 37530737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 15498668 - 15498752
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  15498668 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 15498752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 16218384 - 16218300
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  16218384 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 16218300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 24171388 - 24171472
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||| ||||| ||||||||||| |||||||| ||| ||| ||||    
T  24171388 tagcttatagcttgttggattagcttataagctcgttagatgaaatcgtgacgtgtttggtaacaagcttttttcatgagcttat 24171472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 29525397 - 29525313
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  29525397 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 29525313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 36761085 - 36761169
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  36761085 tagcttataggttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 36761169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 41734345 - 41734261
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  41734345 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 41734261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 42709334 - 42709418
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  42709334 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 42709418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 13019017 - 13019093
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||  ||||||||||| |||||||||||| || ||| |||| | |||||||||||||| |||||||||||||    
T  13019017 tagcttataacttgttggactagcttataagtttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 13019093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 34590032 - 34589918
Alignment:
Q  90 cataggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctt 189  Q
    |||||||||||||||||||||         |||||||||| |||||||| || |||||||| | ||| ||||||||| ||  ||||||||||| ||||||    
T  34590032 cataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacatggcgtgtttggtaacaagctt 34589933  T
Q  190 ttctcacgagtttat 204  Q
    || ||| ||| ||||    
T  34589932 ttttcatgagcttat 34589918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 76437 - 76521
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| || ||||| || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| || |||| ||||    
T  76437 tagcttatagctttttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcccgagcttat 76521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 10815086 - 10815170
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||||| || |||||||| | ||| ||||||||  ||| |||||| |||| |||||||| ||| ||| ||||    
T  10815086 tagcttatagtttgttggattagcttataagctcgttagatgaaaatatgacgtgtttagtaacaagcttttttcatgagcttat 10815170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 12953908 - 12953824
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||| ||||||||| || |||||||| | ||| ||||||||||||  ||||||| ||| |||||||| ||| ||| ||||    
T  12953908 tagcttataatttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttgataacaagcttttttcatgagcttat 12953824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 24463540 - 24463624
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| || ||| | || |||||||||||||||||| ||||| |||||| |||||||| ||  |||||||| ||| ||||    
T  24463540 tagcttataggttattgaattagcttataagtttgttggatcaaaacatgatgtatttggtaacaattttttctcatgagcttat 24463624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 27813077 - 27812993
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||| | ||  ||||||| | ||| ||||||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  27813077 tagcttatagcttgttgaattagtttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 27812993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 20768945 - 20768871
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttct 193  Q
    |||| |||||||||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| ||||||||||    
T  20768945 ttagtttatagtttgttggactatcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttct 20768871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 1923970 - 1924046
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | || ||||||||||| |||||||||||||    
T  1923970 tagcttatagcttgttggactagcttataagcttgctttgat-aaaatgagacgtgtttggtaaaaagcttttctcac 1924046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 3703498 - 3703559
Alignment:
Q  143 cttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||| || |||||||||||||||| ||||||| ||| ||| |||||||| ||| ||||    
T  3703498 cttataagcttattggatgaaaacgtgacgtgtttgataacaagtttttctcatgagcttat 3703559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 7615075 - 7615002
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    ||||||| |||||||| || |||||||| | ||| ||||||||| ||  ||||||||||| |||||||| ||||    
T  7615075 cttatagcttgttggattagcttataagctcgttagatgaaaacatggcgtgtttggtaacaagcttttttcac 7615002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 20017382 - 20017306
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| ||| |||||||||    
T  20017382 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagtttttctcac 20017306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 3749418 - 3749366
Alignment:
Q  144 ttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    ||||||||||||||||| ||||  ||| ||||||| ||||||| |||||||||    
T  3749418 ttataagtttgttggatcaaaatatgacgtgtttgataataagtttttctcac 3749366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 11575645 - 11575681
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgtt 156  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  11575645 tagcttatagcttgttggactagcttataagtttgtt 11575681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 4070843 - 4070923
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4070843 ttatagtttgttgaactagcttataagttagttggatgaaaacgtgatgtgtttggtaataaacttttctcacgagtttat 4070923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 42293004 - 42293084
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  42293004 ttatagtttgttggactagcttataagttcgttggatgaaaacgtgatgtgtttggtaacaagcttttctcacgagcttat 42293084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 42528132 - 42528053
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgag 199  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  42528132 tagcttatagcttgttggactagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaagtttttctcacgag 42528053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 51760493 - 51760578
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||| | ||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  51760493 ttagcttacaatttattggattaacttataagcttgttggatgaaaacgtgatgtgtttggtaacaagcttttctcacgagcttat 51760578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 25999246 - 25999162
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||| || ||| ||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  25999246 ttagcttatagcttattgaactaatttataagtttgttggatgaaaacgtgatgtgtttgg-aacaagcttttctcacgagcttat 25999162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 6124734 - 6124818
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||  ||||||||||| |||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||| ||||    
T  6124734 tagcttataacttgttggactatcttataagcttgtttgatgaaaacgtgatgtgtttggtaacaaacttttctcacgagcttat 6124818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 52959315 - 52959386
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    ||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||| ||||||||    
T  52959315 tagcttatagtttgttggattaacttataagctcgttggatgaaaacgtgacgtgtttggtaacaagctttt 52959386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 51980728 - 51980839
Alignment:
Q  93 aggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttc 192  Q
    ||||||||||||||||||        |||| |||||| ||||||||||| |||||||| ||||||||||||||| |||||||||||||||  |||||||     
T  51980728 aggctgtgtttggtaacacaaaaaagttagtttatagcttgttggactagcttataagcttgttggatgaaaacatgatgtgtttggtaacgagcttttt 51980827  T
Q  193 tcacgagtttat 204  Q
    ||||||| ||||    
T  51980828 tcacgagcttat 51980839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 19274753 - 19274837
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | |||||||||||| |||| ||||||||||| |||||||||||||||| ||||    
T  19274753 tagcttatagcttgttggattagcttataagctcgttggatgaaaatgtgacgtgtttggtaacaagcttttctcacgaggttat 19274837  T

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Target: chr3; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 32999733 - 32999649
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| || ||||| || |||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||| ||||    
T  32999733 tagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacgagcttttctcatgagcttat 32999649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 8879387 - 8879471
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||||| || |||||||||| ||| ||||||||||||| || |||||||| |||||||| ||| ||| ||||    
T  8879387 tagcttatagtttgttggattagcttataagttcgttagatgaaaacgtgacgtatttggtaacaagcttttttcatgagcttat 8879471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 12764698 - 12764778
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||| || ||||| || |||||||| ||| ||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  12764698 ttatagctttttggattagcttataagcttgctggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttat 12764778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 42293216 - 42293264
Alignment:
Q  308 acaagctacccacgttattattctttaatcgctgcactacctcattgct 356  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42293216 acaagctacccacgttattattctttaaccgctgcactacctcattgct 42293264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 9558963 - 9558852
Alignment:
Q  93 aggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttc 192  Q
    |||||||||||||||||||        |||||||||| ||||| || || |||||||| | |||||| |||||||||| ||||||||||| |||||||||    
T  9558963 aggctgtgtttggtaacataaataagctagcttatagcttgttagattagcttataagctcgttggaagaaaacgtgacgtgtttggtaacaagcttttc 9558864  T
Q  193 tcacgagtttat 204  Q
    ||| ||| ||||    
T  9558863 tcatgagcttat 9558852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 54463529 - 54463448
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||| || |||||||| | ||| ||||||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  54463529 cttatagtttgttggattatcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 54463448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 17666825 - 17666909
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| || ||||| ||||||||||| | ||||||||||||||||| ||||||||||| || ||||| ||| ||| ||||    
T  17666825 tagcttatagcttattggattaacttataagctcgttggatgaaaacgtgacgtgtttggtaacaaacttttttcatgagcttat 17666909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 50198078 - 50197998
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||  ||||| ||| |||||| ||||||||||||||||||||||||||| |||| ||| |||||||| ||| ||||    
T  50198078 ttatagttaattggattaatttataaatttgttggatgaaaacgtgatgtgtttagtaacaagtttttctcatgagcttat 50197998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 48051017 - 48051079
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaa 182  Q
    |||||||||| |||||||| ||||||||||| | ||| ||||||||||||| |||||||||||    
T  48051017 tagcttatagcttgttggattaacttataagctcgttagatgaaaacgtgacgtgtttggtaa 48051079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 52184930 - 52184819
Alignment:
Q  93 aggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttc 192  Q
    ||||||||||||||||||        ||||||||||| ||||| || ||||||||||| | ||| ||||||||||||  ||||||||||| ||||||||     
T  52184930 aggctgtgtttggtaacacaaaaaagttagcttatagcttgttagattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttt 52184831  T
Q  193 tcacgagtttat 204  Q
    ||| ||| ||||    
T  52184830 tcatgagcttat 52184819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 43968429 - 43968344
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| ||||||| | || |||||||| ||||||||| ||||| ||| ||||||||||| ||| |||||||| ||| ||||    
T  43968429 ttagcttataatttgttgaattagcttataagcttgttggatcaaaacatgacgtgtttggtaacaagtttttctcatgagcttat 43968344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 8321507 - 8321423
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  8321507 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 8321423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 12055591 - 12055507
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||||| || |||||||| |  || ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  12055591 tagcttatagtttgttggattagcttataagctccttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 12055507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 30318020 - 30317936
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||||| || |||||||| | ||| ||||||||||||| ||||||| ||| ||| |||| ||| ||| ||||    
T  30318020 tagcttatagtttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttgataacaagattttttcatgagcttat 30317936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 30743091 - 30743019
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||| ||||||||||||||| || |||||||| | ||| |||||||| ||| |||||||||||| ||||||||    
T  30743091 ttagtttatagtttgttggattagcttataagctggttagatgaaaatgtggtgtgtttggtaacaagctttt 30743019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 34436051 - 34435967
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  34436051 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 34435967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 41991760 - 41991676
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  41991760 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 41991676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 51062933 - 51063017
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||| | || |||||||||| ||| ||||||||||||| ||||||| ||| |||||||| ||| ||| ||||    
T  51062933 tagcttatagcttgttgaattatcttataagttcgttagatgaaaacgtgacgtgtttgataacaagcttttttcatgagcttat 51063017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 6586261 - 6586364
Alignment:
Q  93 aggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||||||||||||       |||| |||||||||||||||||| |||||||| ||| || ||| |||| |  ||||||||||||| ||||||||    
T  6586261 aggctgtgtttggtaacataaaaaagttagtttatagtttgttggactagcttataagcttgttttgat-aaaatgatatgtgtttggtaaaaagctttt 6586359  T
Q  192 ctcac 196  Q
    |||||    
T  6586360 ctcac 6586364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 2557975 - 2557894
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||| ||||| || ||||||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  2557975 cttatagcttgtttgattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 2557894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 32111636 - 32111560
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| |||||||||||||    
T  32111636 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 32111560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 35554605 - 35554686
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||  | ||| ||||||||||| ||||| ||||| ||||||||||| ||| || ||||||||| ||| ||||    
T  35554605 cttatagtttgttaaattaatttataagtttgctggatcaaaacatgatgtgtttgataacaaacttttctcatgagattat 35554686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 46668335 - 46668436
Alignment:
Q  91 ataggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagctt 189  Q
    |||||||||||||||||||||        |||||||||| |||||||||||||||||||| ||| || ||| ||||   |||||||||||||| ||||||    
T  46668335 ataggctgtgtttggtaacataaaaaagctagcttatagcttgttggactaacttataagcttgttttgat-aaaataagatgtgtttggtaaaaagctt 46668433  T
Q  190 ttc 192  Q
    |||    
T  46668434 ttc 46668436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 36237859 - 36237943
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||||| ||||||||||| | ||| ||| |||| |||  || |||||||| |||||||| ||| ||| ||||    
T  36237859 tagcttatagtttgttggattaacttataagctcgttagataaaaatgtggcgtatttggtaacaagcttttttcatgagcttat 36237943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 12122250 - 12122179
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||| |||||| | || |||||||| |||||| || |||| |||| ||||||||||| ||||||||    
T  12122250 tagcttatagcttgttgaattagcttataagcttgttgtatcaaaatgtgacgtgtttggtaacaagctttt 12122179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 32390191 - 32390114
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    ||||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| ||| |||||||||    
T  32390191 ttagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagtttttctcac 32390114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 40374581 - 40374508
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttg-gatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    ||||||| ||||||||||| |||||||| |||||  ||| |||| | |||||||||||||| |||||||||||||    
T  40374581 cttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 40374508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 41888832 - 41888868
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgtt 156  Q
    |||||||||||||||||||||| |||||||| |||||    
T  41888832 tagcttatagtttgttggactagcttataagcttgtt 41888868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 48104823 - 48104775
Alignment:
Q  308 acaagctacccacgttattattctttaatcgctgcactacctcattgct 356  Q
    |||||||||||||| | |||||||||||  |||||| ||||||||||||    
T  48104823 acaagctacccacgcttttattctttaactgctgcagtacctcattgct 48104775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 42997541 - 42997621
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  42997541 ttatagtttgttggactagcttataagctcgttggatgaaaacgtgatgtgtttggtaacaagcttttctcacgagcttat 42997621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 3370476 - 3370556
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||| ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  3370476 ttatagttttttggattagtttataagtttgttggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttat 3370556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 21920872 - 21920788
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| ||||||||||| |||||||| | |||| |||||||||||||||||||||||| |||||||||||| ||| ||||    
T  21920872 tagcttatagcttgttggactagcttataagctagttgaatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttat 21920788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 30524030 - 30523946
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||| |||||| ||| |||||||||||| ||||    
T  30524030 tagcttatagcttgttggattaactcataagcttgttggatgaaaacgtgatgtgtatggtaacaagtttttctcacgagcttat 30523946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 46534431 - 46534515
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| |||||||||||||||||||||||| |||||| || ||||||||||||| ||||    
T  46534431 tagcttatagcttgttggattagcttataagcttgttggatgaaaacgtgatgtgtatggtaacaaacttttctcacgagcttat 46534515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 981359 - 981444
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||||||| || |||||||| | |||| |||||||||||||||||||| ||| |||||||| ||||||| ||||    
T  981359 ttagcttatagtttgttggattagcttataagctagttgaatgaaaacgtgatgtgtttgataacaagcttttttcacgagcttat 981444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 28235308 - 28235381
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttct 193  Q
    ||||||||||||||||||| || |||||||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  28235308 tagcttatagtttgttggattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttct 28235381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 43158244 - 43158184
Alignment:
Q  144 ttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43158244 ttataagctcgttggatgaaaacgtgatgtgtttggtaagaagcttttctcacgagtttat 43158184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 6476949 - 6477024
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctca 195  Q
    |||||||||| || ||||| || |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||    
T  6476949 tagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaagtttttctca 6477024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 25696056 - 25696140
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| ||||| || || |||||||| | ||||||||||||||||| ||||||||||| |||||||||||| ||| ||||    
T  25696056 tagcttatagcttgttagattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttctcatgagcttat 25696140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 46349960 - 46349876
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| || ||||| ||||||||||| ||||||||||||||| | || ||||||||||| ||||||||||| ||| ||||    
T  46349960 tagcttatagcttcttggattaacttataagcttgttggatgaaaacataatatgtttggtaatgagcttttctcatgagcttat 46349876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 28958198 - 28958114
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| ||||||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  28958198 tagcttatagcttgttggattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 28958114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 4060375 - 4060446
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    ||||||||||||||||||| || |||||||| | ||| ||||||||||||  ||||||||||| ||||||||    
T  4060375 tagcttatagtttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagctttt 4060446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 28494383 - 28494268
Alignment:
Q  89 acataggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagct 188  Q
    ||||||||||||||||||||||         |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||    
T  28494383 acataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagct 28494284  T
Q  189 tttctcacgagtttat 204  Q
    ||| ||| ||| ||||    
T  28494283 tttttcatgagcttat 28494268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 42980937 - 42980871
Alignment:
Q  138 actaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||| |||||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||| ||||    
T  42980937 actagcttataagtttgttggattaaaatgtgacgtgtttggtaataagtttttctcatgagcttat 42980871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 14792194 - 14792109
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||| ||||| || || |||||||| | ||||||| ||||||||||||||||||||| || ||||| ||| ||| ||||    
T  14792194 ttagcttatagcttgttagattagcttataagctcgttggattaaaacgtgatgtgtttggtaacaaacttttttcatgagcttat 14792109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 27826732 - 27826816
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  27826732 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 27826816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 40061186 - 40061262
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| |||||  |  |||| | |||||||||||||| |||||||||||||    
T  40061186 tagcttatagcttgttggactagcttataagcttgttttaataaaatgagatgtgtttggtaaaaagcttttctcac 40061262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 42265349 - 42265265
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||| ||||||||||| || ||||| ||| ||| ||||    
T  42265349 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaaacttttttcatgagcttat 42265265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 42329099 - 42329015
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  42329099 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 42329015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 43468086 - 43468011
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctca 195  Q
    |||||||||||||||||||||  |||||||||||| || ||| |||| | |||||||||||||| ||||||||||||    
T  43468086 tagcttatagtttgttggactggcttataagtttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctca 43468011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 47479832 - 47479884
Alignment:
Q  143 cttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctca 195  Q
    |||||||| | ||||||||||||||||| ||||||||||| ||||||||||||    
T  47479832 cttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttctca 47479884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 29994290 - 29994208
Alignment:
Q  122 gcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||| || || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  29994290 gcttatagtttgttagattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 29994208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 31969543 - 31969466
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    ||||||||||| |||||||||||||||||||| ||| || ||| |||| |  ||||||||||||| |||||||||||||    
T  31969543 ttagcttatagattgttggactaacttataagcttgttttgat-aaaatgaaatgtgtttggtaaaaagcttttctcac 31969466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 9806690 - 9806589
Alignment:
Q  95 gctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttg-gatgaaaacgtgatgtgtttggtaataagcttttct 193  Q
    |||||||||||||||||       |||| |||||| ||||||||||| |||||||| |||||  ||| |||| | |||||||||||||| ||||||||||    
T  9806690 gctgtgtttggtaacataaaaaagttagtttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttct 9806592  T
Q  194 cac 196  Q
    |||    
T  9806591 cac 9806589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 37658191 - 37658115
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| |||||||||||||    
T  37658191 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 37658115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 39870097 - 39870021
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    ||||||||||||||||||| || |||||||| ||| || ||| |||| | |||||||||||||| |||||||||||||    
T  39870097 tagcttatagtttgttggattagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 39870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 35647439 - 35647523
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| |  |||||||| | ||| |||||||| |||| ||||||||||| |||||||| ||| ||| ||||    
T  35647439 tagcttatagcttgttggatttgcttataagctcgttagatgaaaatgtgacgtgtttggtaacaagcttttttcatgagcttat 35647523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 46672529 - 46672613
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||  |||||||| || |||||||| | ||| |||||||| |||| ||||||||||| |||||||| ||| ||| ||||    
T  46672529 tagcttataacttgttggattagcttataagctcgttagatgaaaatgtgacgtgtttggtaacaagcttttttcatgagcttat 46672613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 31031966 - 31031899
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||| |||||||| ||||||||||| | |||  |||||||||||  ||||||||||| ||||||||    
T  31031966 ttatagcttgttggattaacttataagctcgttaaatgaaaacgtggcgtgtttggtaacaagctttt 31031899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 35670430 - 35670354
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| || ||||||||||    
T  35670430 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaaacttttctcac 35670354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 42328242 - 42328169
Alignment:
Q  119 ttagcttata-gtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||| | |||||||| || |||||||| | ||| |||||||| |||| | ||||||||||||||||||    
T  42328242 ttagcttataagcttgttggattagcttataagctcgttagatgaaaatgtgacgagtttggtaataagctttt 42328169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 46350913 - 46350828
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||| |||||||| ||  ||||||| | ||| ||||||||| ||| ||||||||||| || ||||| ||| ||| ||||    
T  46350913 ttagcttatagcttgttggattagtttataagctcgttagatgaaaacatgacgtgtttggtaacaaacttttttcatgagcttat 46350828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 30523814 - 30523767
Alignment:
Q  308 acaagctacccacgttattattctttaatcgctgcactacctcattgct 356  Q
    ||||||||||||| ||||||| |||||| || |||||||||||||||||    
T  30523814 acaagctacccacattattat-ctttaaccggtgcactacctcattgct 30523767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 43337656 - 43337740
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || ||||||||   ||||||||||| |||||||| ||| ||| ||||    
T  43337656 tagcttatagcttgttggattagcttataagctcgttagacgaaaacgttgcgtgtttggtaacaagcttttttcatgagcttat 43337740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 46536145 - 46536229
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||| ||| |||||||| || |||||||  | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  46536145 tagcttgtagcttgttggattagcttataaactcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 46536229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 46615751 - 46615671
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||| || || |||||||| | ||| |||||||||||   ||||||||||| |||||||| ||| ||| ||||    
T  46615751 ttatagtttgttagattagcttataagctcgttagatgaaaacgtagcgtgtttggtaacaagcttttttcatgagcttat 46615671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 48935258 - 48935342
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| ||  ||||||| | |||||||  |||||||| ||||||||||| || ||||| ||| ||| ||||    
T  48935258 tagcttatagcttgttggattagtttataagctcgttggatagaaacgtgacgtgtttggtaacaaacttttttcatgagcttat 48935342  T

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Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 53431653 - 53431737
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||| || ||||||||||||| ||||    
T  53431653 tagcttatagcttgttggactagcttataagtttgttggatgaaaacatgatgtgtttggtaacaaacttttctcacgagcttat 53431737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 30653368 - 30653283
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||| | ||||||||||| |||||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||| ||||    
T  30653368 ttagcttatggcttgttggactagcttataagcttgttggatgaaaacatgatgtgtttggtaacaagcttttttcacgagcttat 30653283  T

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Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 51941126 - 51941210
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| |||| |||||||||| ||| |||||||| ||| ||||    
T  51941126 tagcttatagcttgttggactaacttataagtttgttggatcaaaacatgatatgtttggtaacaagtttttctcatgagcttat 51941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 24152699 - 24152774
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctca 195  Q
    |||||||||| |||||||||||  ||||||| | ||||||||||||||||||||||||||||||||| ||||||||    
T  24152699 tagcttatagcttgttggactagtttataagctagttggatgaaaacgtgatgtgtttggtaataagtttttctca 24152774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 28778552 - 28778658
Alignment:
Q  93 aggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttc 192  Q
    |||||||||||||||||||        ||| |||||| ||||| || |||||||||||||  |||||||||||||||| ||||||||||| |||||||||    
T  28778552 aggctgtgtttggtaacataaataagctagtttatagcttgttagattaacttataagttcattggatgaaaacgtgacgtgtttggtaacaagcttttc 28778651  T
Q  193 tcacgag 199  Q
    |||||||    
T  28778652 tcacgag 28778658  T

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Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 25687013 - 25687093
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||| ||||| || |||||||| |||||| |||||||||||||||||||||||| |||||||||||| ||| ||||    
T  25687013 ttatagttttttggattagcttataagcttgttgtatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttat 25687093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 40674769 - 40674849
Alignment:
Q  119 ttagcttata-gtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacga 198  Q
    |||||||||| | ||||||||||| |||||||| || |||||||||||| |||||||||||||||||||||||| ||||||    
T  40674769 ttagcttataagcttgttggactagcttataagcttattggatgaaaacatgatgtgtttggtaataagcttttttcacga 40674849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 44526014 - 44525944
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttt 190  Q
    ||||||||||||||||||| || |||||||||| |||  |||||||||||||||||||||||| |||||||    
T  44526014 tagcttatagtttgttggattagcttataagttcgttaaatgaaaacgtgatgtgtttggtaacaagcttt 44525944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 37498229 - 37498310
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||| || |||||||| | ||||||||||||||||| ||||||||||| || ||||||||| ||| ||||    
T  37498229 cttatagtttgttggattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaaacttttctcatgagcttat 37498310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 47633921 - 47633836
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||| |||||||| || |||||||| | ||| ||||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  47633921 ttagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagtttat 47633836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 2943728 - 2943644
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||||| || |||||||| | ||| ||||||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  2943728 tagcttatagtttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 2943644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 49335267 - 49335183
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||||| ||| || |||||||||| |||||||||||||||||||| ||| ||| ||||    
T  49335267 tagcttatagcttgttggattagcttataagttcgttagaagaaaacgtgacgtgtttggtaataagcttttttcatgagcttat 49335183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 6287859 - 6287944
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||| || || || || ||||||||||| |||||||||||||||||||||||||||| || ||||| ||| ||| ||||    
T  6287859 ttagcttatagcttcttagattagcttataagtttattggatgaaaacgtgatgtgtttggtaacaaacttttttcatgagcttat 6287944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 6238211 - 6238295
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  6238211 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 6238295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 43374618 - 43374702
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||||||||    
T  43374618 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagtttat 43374702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 54683620 - 54683704
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||  ||||| || || |||||||| | ||||||||||||||||| ||||||||||| |||||||||||| ||| ||||    
T  54683620 tagcttataacttgttagattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttctcatgagcttat 54683704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 44448473 - 44448554
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||| |||||||| ||||||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  44448473 cttatagcttgttggattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 44448554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 55496114 - 55496061
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatg 172  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||| |||||    
T  55496114 ttagcttatagcttgttggactagcttataagcttgttggatgaaaacatgatg 55496061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 7141187 - 7141135
Alignment:
Q  152 ttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| |||| ||||    
T  7141187 ttgttggatgaaaacgtgatgtgtttgttaacaagcttttctcgcgagcttat 7141135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 19801939 - 19801855
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  19801939 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 19801855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 33984111 - 33984195
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||| | || |||||||| | ||| ||||||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  33984111 tagcttatagcttgttgaattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 33984195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 55001820 - 55001736
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| |||||||||||| |||||||||||| | |||||| ||| ||| ||||    
T  55001820 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggtgtgtttggtaacaggcttttttcatgagcttat 55001736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 39840271 - 39840200
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||  ||||||||||| ||||||||    
T  39840271 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagctttt 39840200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 53284030 - 53284101
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| ||||||||    
T  53284030 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagctttt 53284101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 52908430 - 52908487
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttg 178  Q
    |||||||||||| ||||||||| ||||||| || |||||||||||| ||||||||||||    
T  52908430 tagcttatagtt-gttggactagcttataaattagttggatgaaaatgtgatgtgtttg 52908487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 1771916 - 1771840
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| |||||||||||||    
T  1771916 tagcttatagcttgttggactagcttataagcttgctttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 1771840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 19800948 - 19801033
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||| |||||||| || |||||||| | |||  |||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  19800948 ttagcttatagcttgttggattagcttataagctcgttacatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 19801033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 30411328 - 30411252
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| |||||||||||||    
T  30411328 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 30411252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 40685825 - 40685885
Alignment:
Q  144 ttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||| ||||||||||||| ||||||||||||||| || |||| |||| ||| ||||    
T  40685825 ttataagttcgttggatgaaaacatgatgtgtttggtaacaaactttgctcatgagcttat 40685885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 28459634 - 28459708
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttct 193  Q
    |||| |||||||||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| ||||||||||    
T  28459634 ttagtttatagtttgttggactatcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttct 28459708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 32012570 - 32012641
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||| ||||| || || |||||||||||||| |||||||| |||  |||||| |||| ||||||||    
T  32012570 tagcttatagcttgttagattagcttataagtttgttagatgaaaatgtggcgtgtttcgtaacaagctttt 32012641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 19912696 - 19912772
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| ||| |||||||||    
T  19912696 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagtttttctcac 19912772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 34438305 - 34438350
Alignment:
Q  308 acaagctacccacgttattattctttaatcgctgcactacctcatt 353  Q
    |||||||| ||||||||||||||||||| | ||| |||||||||||    
T  34438305 acaagctatccacgttattattctttaacccctggactacctcatt 34438350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 36181443 - 36181362
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||  | || |||||||  | ||| ||||||||||||  |||||||||||||||||||| ||| ||| ||||    
T  36181443 cttatagtttgttaaattagcttataaactcgttagatgaaaacgtgtcgtgtttggtaataagcttttttcatgagcttat 36181362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 2390346 - 2390310
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgtt 156  Q
    |||||||||| || |||||||||||||||||||||||    
T  2390346 tagcttatagcttcttggactaacttataagtttgtt 2390310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 20356777 - 20356693
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||  |||||||| || |||||||| | ||| ||||||||||||| |||||||| || ||| |||| ||| ||| ||||    
T  20356777 tagcttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggcaacaagtttttttcatgagcttat 20356693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 37114510 - 37114426
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | |||  |||||||||||  ||||||||||| ||| |||| ||| ||| ||||    
T  37114510 tagcttatagcttgttggattagcttataagctcgttatatgaaaacgtggcgtgtttggtaacaagtttttttcatgagcttat 37114426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 43590557 - 43590593
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgtt 156  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  43590557 tagcttatagcttgttggactagcttataagtttgtt 43590593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 45561392 - 45561308
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||  ||||||  ||| |||||||| ||| ||| ||||    
T  45561392 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttaataacaagcttttttcatgagcttat 45561308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 2773659 - 2773575
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  2773659 tagcttatagcttgttggactagcttataagcttgttggatgaaaacgtgacgtgcttggtaacaagcttttctcacgagcttat 2773575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 41355634 - 41355718
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |  ||||| || |||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||    
T  41355634 tagcttatagctccttggattagcttataagtttgttggatgaaaacgtgatgtgtttggtaacaaacttttctcatgagcttat 41355718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 3512494 - 3512569
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctca 195  Q
    |||||||||| || ||||| || |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||    
T  3512494 tagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaagtttttctca 3512569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 34903443 - 34903370
Alignment:
Q  131 ttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||| | ||| |||||||||||||||| ||||    
T  34903443 ttgttggactagcttataagcttgttggatgaaaacatgatgtgttggataacaagcttttctcacgagcttat 34903370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 24804563 - 24804488
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctca 195  Q
    |||||||||| || ||||| || | |||||| |||||||||||||| |||||||||||||||| ||||||||||||    
T  24804563 tagcttatagcttcttggattagcctataagcttgttggatgaaaatgtgatgtgtttggtaacaagcttttctca 24804488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 7303365 - 7303425
Alignment:
Q  144 ttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||| ||| ||||    
T  7303365 ttataagtttgttggatgaaaatgtgatgtgtttggtaccaagcttttctcatgagcttat 7303425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 35057377 - 35057293
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| ||||| || || |||||||| | |||||||| |||||||| ||||||||||| |||||||||||| ||| ||||    
T  35057377 tagcttatagcttgttagattagcttataagctcgttggatgcaaacgtgacgtgtttggtaacaagcttttctcatgagcttat 35057293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 41789029 - 41788981
Alignment:
Q  308 acaagctacccacgttattattctttaatcgctgcactacctcattgct 356  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  41789029 acaagctacccacgttattattctttaaccgctgcactacctcaatgct 41788981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 16786604 - 16786534
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttct 193  Q
    ||||||| || ||||| || |||||||| |||||| |||||||||||||||||||||||| || |||||||    
T  16786604 cttatagcttcttggattagcttataagcttgttgaatgaaaacgtgatgtgtttggtaacaaacttttct 16786534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 284840 - 284925
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||| |||||| |||||||| || |||||||||| ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  284840 ttagtttatagcttgttggattagcttataagttcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 284925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 631037 - 630952
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||| |||||| |||||||| || |||||||||| ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  631037 ttagtttatagcttgttggattagcttataagttcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 630952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 816849 - 816764
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||| |||||| |||||||| || |||||||||| ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  816849 ttagtttatagcttgttggattagcttataagttcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 816764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 5574624 - 5574709
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||||| | ||||||||||| | ||| ||||||||||||  ||||||||||| ||| |||| ||| ||| ||||    
T  5574624 ttagcttatagtttgttgaattaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagtttttttcatgagcttat 5574709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 16785863 - 16785924
Alignment:
Q  145 tataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttatga 206  Q
    |||||| | ||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||    
T  16785863 tataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttctcatgagcttatga 16785924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 21266905 - 21266856
Alignment:
Q  155 ttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  21266905 ttggatgaaaacgtgacgtgtttggtaacaagcttttctcacgagcttat 21266856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 22215133 - 22215218
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||| |||||||| || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  22215133 ttagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 22215218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 29051249 - 29051173
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttg-gatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    ||||||||||||||||||||||||| ||||| |||||  ||| | || |||||||||||||||| |||||||||||||    
T  29051249 tagcttatagtttgttggactaactcataagcttgttttgat-agaatgtgatgtgtttggtaaaaagcttttctcac 29051173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 39733716 - 39733818
Alignment:
Q  87 tgacataggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataag 186  Q
    ||||||||||||||||||||||||         |||||||||  |||||||| || |||||||| | ||| |||||||||||| |||||||||||| |||    
T  39733716 tgacataggctgtgtttggtaacacaaaaaagctagcttataccttgttggattagcttataagctcgttagatgaaaacgtggtgtgtttggtaacaag 39733815  T
Q  187 ctt 189  Q
    |||    
T  39733816 ctt 39733818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 43800845 - 43800761
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  43800845 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 43800761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 16785663 - 16785726
Alignment:
Q  143 cttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttatga 206  Q
    |||||||| | ||||||||||||||||| ||||||||||| |||||||| ||| ||| ||||||    
T  16785663 cttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttatcatgagcttatga 16785726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 35160346 - 35160275
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||| || ||||| || |||||||||| ||| ||||||||||||  ||||||||||| ||||||||    
T  35160346 tagcttatagcttattggattagcttataagttcgttagatgaaaacgtggcgtgtttggtaacaagctttt 35160275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 18146365 - 18146441
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| |||||||||||||    
T  18146365 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 18146441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 20697583 - 20697498
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||| |||||||| || |||||||| | ||| ||||||||| | | ||||||||||| |||||||| ||| ||| ||||    
T  20697583 ttagcttatagcttgttggattagcttataagctcgttagatgaaaacataacgtgtttggtaacaagcttttttcatgagcttat 20697498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 40532080 - 40532156
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    ||||||||||||| ||||||||||||||||| ||| || ||| |||| | |||||||| ||||| |||||||||||||    
T  40532080 tagcttatagtttattggactaacttataagcttgttttgat-aaaatgagatgtgttcggtaaaaagcttttctcac 40532156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 45069895 - 45069819
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| |||||||||||||    
T  45069895 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 45069819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 14911788 - 14911872
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||||| || |||||||| | ||| |||||||| |||  ||||||||||| ||| |||| ||| ||| ||||    
T  14911788 tagcttatagtttgttggattagcttataagctcgttagatgaaaatgtggcgtgtttggtaacaagtttttttcatgagcttat 14911872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 53546 - 53472
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctca 195  Q
    |||||||||| || ||| | ||||||||||||||||| ||| ||||   ||||||||| |||||||||||||||||    
T  53546 tagcttatagctttttgaattaacttataagtttgtttgat-aaaattagatgtgtttagtaataagcttttctca 53472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 17121842 - 17121909
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||| |||||||| ||||||||||||| ||| |||||||||||   ||||||||||| || |||||    
T  17121842 ttataggttgttggattaacttataagttcgttagatgaaaacgtagcgtgtttggtaacaaactttt 17121909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 38747033 - 38746962
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||  ||| ||||||| ||||||||    
T  38747033 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtggttggtaacaagctttt 38746962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 12208829 - 12208905
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttg-gatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| |||||  ||| |||| | || ||||||||||| |||||||||||||    
T  12208829 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagacgtgtttggtaaaaagcttttctcac 12208905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 12453257 - 12453333
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttg-gatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| |||||  ||| |||| | || ||||||||||| |||||||||||||    
T  12453257 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagacgtgtttggtaaaaagcttttctcac 12453333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 36859250 - 36859335
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||| |||||||| || |||||||| | ||| |||||||||||||  | |||||||| ||| |||| ||| ||| ||||    
T  36859250 ttagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacctatttggtaacaagtttttttcatgagcttat 36859335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 41356312 - 41356388
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttg-gatgaaaacgtgatgtgtttggtaataagcttttctca 195  Q
    ||||| ||||| ||||||||||| |||||||| |||||  ||| |||| | |||||||||||||| ||||||||||||    
T  41356312 ttagcatatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaacaagcttttctca 41356388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 25100291 - 25100207
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| ||||| |  || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  25100291 tagcttatagcttgttagcttagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 25100207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 35398064 - 35398012
Alignment:
Q  139 ctaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||||| | ||| ||||||||||||  ||||||||||| ||||||||    
T  35398064 ctaacttataagctcgttagatgaaaacgtggcgtgtttggtaacaagctttt 35398012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 40529524 - 40529608
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| ||||| |  || |||||||| ||||| |||||||| |||  ||||||||||| |||||||| ||| ||| ||||    
T  40529524 tagcttatagcttgtttgtttagcttataagcttgttagatgaaaatgtgtcgtgtttggtaacaagcttttttcatgagcttat 40529608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 6432193 - 6432277
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| ||||||||||| |||||||| | ||||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  6432193 tagcttatagcttgttggactagcttataagctagttggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttat 6432277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 10361416 - 10361500
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| ||||||||||| |||||||| |  |||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  10361416 tagcttatagcttgttggactagcttataagctcattggatgaaaacatgatgtgtttggtaataagcttttttcacgagcttat 10361500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 45376936 - 45377016
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||| ||||||||||| |||||||| | ||||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  45376936 ttatagcttgttggactagcttataagctagttggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttat 45377016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 13512713 - 13512642
Alignment:
Q  22 gtaatggcatgtagttagattgaatctcatggcaatccttatgaagagaaatattgagaatgtgatgacata 93  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||  |||||||| ||||||||||||||    
T  13512713 gtaatggcatgtagttagattggacctcatggcaatccttatgaagaataatattgaaaatgtgatgacata 13512642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 42097988 - 42097904
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| || ||||| || |||||||| || |||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  42097988 tagcttatagcttcttggattagcttataagcttattggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttat 42097904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 35422070 - 35422150
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||| ||||| || |||||||  ||||||| ||||||||||||||||||||||| |||||||||||| ||| ||||    
T  35422070 ttatagttttttggattagcttataaacttgttggttgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttat 35422150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 43568389 - 43568470
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||| |||||||| || |||||||| | ||||||||||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  43568389 cttatagcttgttggattagcttataagctcgttggatgaaaacgtgacgtgtttggtaacaagcttttatcatgagcttat 43568470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 1876109 - 1876025
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  1876109 tagcttatagtttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 1876025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 34245241 - 34245353
Alignment:
Q  92 taggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    ||||||||||||||||||||        |||||||||| |||||||| || |||||||| | ||| |||||||||||| | |||||||||| ||||||||    
T  34245241 taggctgtgtttggtaacataaaaaagctagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggtttgtttggtaacaagctttt 34245340  T
Q  192 ctcacgagtttat 204  Q
     ||| ||| ||||    
T  34245341 ttcatgagcttat 34245353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 36936149 - 36936078
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||| ||||||||||| ||||||||    
T  36936149 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagctttt 36936078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 3147443 - 3147554
Alignment:
Q  93 aggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttc 192  Q
    |||||||||||||||||||       ||||||||||  ||||| || || |||||||| || ||||||||||| |||| ||||||||||| ||| |||||    
T  3147443 aggctgtgtttggtaacataaataagttagcttataacttgttagattagcttataagcttcttggatgaaaatgtgacgtgtttggtaacaagtttttc 3147542  T
Q  193 tcacgagtttat 204  Q
    ||| ||| ||||    
T  3147543 tcatgagcttat 3147554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 39532084 - 39532161
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    ||||||||||| ||||||||||| |||||||||||| || ||| |||| | |||||||||||||| |||||||||||||    
T  39532084 ttagcttatagcttgttggactagcttataagtttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 39532161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 8875695 - 8875780
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||  |||||||| || |||||||| | ||| ||||||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  8875695 ttagcttataacttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 8875780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 356
Target Start/End: Original strand, 10361637 - 10361678
Alignment:
Q  315 acccacgttattattctttaatcgctgcactacctcattgct 356  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  10361637 acccacgttattattctttaaccgctgcactacctcattgct 10361678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 10247460 - 10247387
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctc 194  Q
    ||||||||||||||||||||||| |||||||| |||||   ||| ||  ||||||||||||||| |||||||||||    
T  10247460 ttagcttatagtttgttggactagcttataagcttgtt--ttgataaaatgatgtgtttggtaaaaagcttttctc 10247387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 12160990 - 12160906
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  12160990 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 12160906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 30523632 - 30523716
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  30523632 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 30523716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 39241237 - 39241153
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||| ||||||||||| || ||||| ||| ||| ||||    
T  39241237 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaaacttttttcatgagcttat 39241153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 42519737 - 42519821
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||| | || |||||||| | ||| ||||||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  42519737 tagcttatagcttgttgcattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 42519821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 7454556 - 7454639
Alignment:
Q  121 agcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  7454556 agcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 7454639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 18109791 - 18109715
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| |||||||||||||    
T  18109791 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 18109715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 43496185 - 43496258
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttct 193  Q
    |||||||||| |||||| | || |||||||| | ||||||||||||||||| |||||| |||| ||| ||||||    
T  43496185 tagcttatagcttgttgcattagcttataagctcgttggatgaaaacgtgacgtgtttagtaacaagtttttct 43496258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 5774120 - 5774200
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||| |||||||| || |||||||| ||||| ||||||||||||  ||||||||||| ||| |||| ||| ||| ||||    
T  5774120 ttatagcttgttggattagcttataagcttgttagatgaaaacgtggcgtgtttggtaacaagtttttttcatgagcttat 5774200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 14958147 - 14958227
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||| |||||||| ||  ||||||| | ||| ||||||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  14958147 ttatagcttgttggattagtttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 14958227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 11018108 - 11018046
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaa 182  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||  |||||||||||    
T  11018108 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaa 11018046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 40788756 - 40788802
Alignment:
Q  158 gatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||| |||| ||||||| |||||||||||| ||||    
T  40788756 gatgaaaacgtgatgtatttgataataagtttttctcacgagattat 40788802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 40862276 - 40862204
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttg-gatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||| ||||||||||| |||||||| |||||  ||| |||| | |||||||||||||| |||||||||||||    
T  40862276 ttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 40862204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 16496692 - 16496608
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| ||  ||||||| | ||| ||||||||||||  |||||||| || |||||||| ||| ||| ||||    
T  16496692 tagcttatagcttgttggattagtttataagctcgttagatgaaaacgtggcgtgtttggcaacaagcttttttcatgagcttat 16496608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 28014488 - 28014572
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| || ||| | || |||||||||||||||||| ||||| ||| |||||||  || || ||||||||| ||| ||||    
T  28014488 tagcttatagcttattgaattagcttataagtttgttggatcaaaacatgacgtgtttgacaacaaacttttctcatgagcttat 28014572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 28125082 - 28125046
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgtt 156  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  28125082 tagcttatagcttgttggactagcttataagtttgtt 28125046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 38245976 - 38245940
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgtt 156  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  38245976 tagcttatagtttattggactaacttataagcttgtt 38245940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 38928640 - 38928604
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgtt 156  Q
    |||||||||||||||||||||| |||||||| |||||    
T  38928640 tagcttatagtttgttggactagcttataagcttgtt 38928604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 2459722 - 2459638
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| || |||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  2459722 tagcttatagcttgttggattagcttataagcttattggatgaaaacgtgatgtgtttggtaacaagcttttctcacgagcttat 2459638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 38058772 - 38058856
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| ||||||||||| |||||||  ||||||| ||||||||||||||||||||||| |||||||||||||||| ||||    
T  38058772 tagcttatagcttgttggactagcttataaccttgttggttgaaaacgtgatgtgtttggtaacaagcttttctcacgagcttat 38058856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 44278038 - 44277957
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||| ||||||||||| |||||||| | ||||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  44278038 cttatagcttgttggactagcttataagctagttggatgaaaacgtgatgtgtttggtaacaagcttttctcatgagcttat 44277957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 28343716 - 28343796
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||| ||| ||||    
T  28343716 ttatagtttgttggagtaacttataagttcgttggatgaaaacgtgatgtgtttggtaacaagtttttttcatgagcttat 28343796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 41865310 - 41865394
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| || ||||| || |||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||| ||||    
T  41865310 tagcttatagcttcttggattagcttataagcttgttggatgaaaacgtgatgtgtttggtaacgagcttttctcatgagcttat 41865394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 46742479 - 46742563
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||| ||||| ||  ||||||| ||||||||||||||| ||||| ||||||||| |||||||||||| ||| ||||    
T  46742479 tagcttatagtttcttggattagattataagcttgttggatgaaaacatgatgcgtttggtaacaagcttttctcatgagcttat 46742563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 2937360 - 2937433
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttct 193  Q
    |||||||||| |||||| | || |||||||||||||||||| |||| |||||||||||||||| || |||||||    
T  2937360 tagcttatagcttgttgaattagcttataagtttgttggatcaaaatgtgatgtgtttggtaacaaacttttct 2937433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 36739575 - 36739660
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||| ||||||||||||||| ||||||||||| | ||| ||||||||||||| |||||||||||  ||||||| ||| ||| ||||    
T  36739575 ttagtttatagtttgttggattaacttataagctcgttagatgaaaacgtgacgtgtttggtaacgagcttttttcatgagcttat 36739660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 5698531 - 5698606
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| |||||||||||||||||||| ||||| ||| |||| | |||||||||| ||| |||||||||||||    
T  5698531 tagcttatagcttgttggactaacttataagcttgtttgat-aaaatgagatgtgtttgataaaaagcttttctcac 5698606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 11332869 - 11332949
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||||| |||||||| | || |||||||||  |||||||||| |||| |||||||||||| ||| ||||    
T  11332869 ttatagtttgttggactagcttataagctcgtgggatgaaaaattgatgtgtttagtaacaagcttttctcaggagcttat 11332949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 11490890 - 11490970
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||||| |||||||| | || |||||||||  |||||||||| |||| |||||||||||| ||| ||||    
T  11490890 ttatagtttgttggactagcttataagctcgtgggatgaaaaattgatgtgtttagtaacaagcttttctcaggagcttat 11490970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 46315764 - 46315680
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  46315764 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 46315680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 193
Target Start/End: Original strand, 25365760 - 25365856
Alignment:
Q  97 tgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttct 193  Q
    |||||||||||||||       ||||||||||| ||||| || ||||||||||| | |||||||||||||||||  |||||||||| || |||||||    
T  25365760 tgtgtttggtaacataaataagttagcttatagcttgttagattaacttataagctcgttggatgaaaacgtgacatgtttggtaacaaacttttct 25365856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 28955659 - 28955547
Alignment:
Q  92 taggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    ||||||||||||||||||||        || ||||||| ||||| || || |||||||| | ||| ||||||||||||||||||||||||| ||||||||    
T  28955659 taggctgtgtttggtaacataaaaaagctaacttatagcttgttagattagcttataagctcgttagatgaaaacgtgatgtgtttggtaacaagctttt 28955560  T
Q  192 ctcacgagtttat 204  Q
     ||| ||| ||||    
T  28955559 ttcatgagcttat 28955547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 9423128 - 9423058
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttct 193  Q
    ||||||| |||||| | || |||||||| ||||||||| |||| |||||||||||||||| ||||||||||    
T  9423128 cttatagcttgttgaattagcttataagcttgttggatcaaaatgtgatgtgtttggtaacaagcttttct 9423058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 47326660 - 47326598
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaa 182  Q
    ||||||||||||||||||| || |||||||| | ||| |||||||||||| ||||||||||||    
T  47326660 tagcttatagtttgttggattagcttataagctcgttagatgaaaacgtggtgtgtttggtaa 47326598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 31657172 - 31657103
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttct 193  Q
    ||||| ||||||||| || |||||||| | || ||||||||||||||||||||||| || ||||||||||    
T  31657172 ttataatttgttggattagcttataagctcgtcggatgaaaacgtgatgtgtttggcaacaagcttttct 31657103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 38624094 - 38624175
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||| || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  38624094 cttatagtttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 38624175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 28314926 - 28314846
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||| ||||||||| ||||||||||| |  || ||| ||||||||||||||||||||| |||||||| ||| ||| ||||    
T  28314926 ttataatttgttggattaacttataagctcattagataaaaacgtgatgtgtttggtaacaagcttttttcatgagcttat 28314846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 30358097 - 30358181
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  30358097 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 30358181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 33076628 - 33076711
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||| || || || ||||| | |||||||||||| |||| ||||||||||| |||||||||||| ||| ||||    
T  33076628 tagcttatagtttgttagattagct-ataagctcgttggatgaaaatgtgacgtgtttggtaacaagcttttctcatgagcttat 33076711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 35179814 - 35179918
Alignment:
Q  91 ataggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagctt 189  Q
    |||||||||||||||||||||        |||||||||| ||||||||||| |||||||||||| || ||| |||| | |||||||||| ||| ||||||    
T  35179814 ataggctgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagtttgttttgat-aaaatgagatgtgtttgataaaaagctt 35179912  T
Q  190 ttctca 195  Q
    ||||||    
T  35179913 ttctca 35179918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 39325634 - 39325718
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  39325634 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 39325718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 27747630 - 27747701
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||  ||||||||||| ||||||||    
T  27747630 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagctttt 27747701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 50586255 - 50586184
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||| |||||||| || |||||||| | ||| ||||||||||||  ||||||||||| ||||||||    
T  50586255 tagcttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagctttt 50586184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 38815625 - 38815541
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| |||||||| |||  ||||||||||| |||||||| ||| ||| ||||    
T  38815625 tagcttatagcttgttggattagcttataagctcgttagatgaaaatgtggcgtgtttggtaacaagcttttttcatgagcttat 38815541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 45900196 - 45900276
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||| |||||||| || |||||||| | ||| || |||||||||||||||||||||| || ||||| ||| ||| ||||    
T  45900196 ttatagcttgttggattagcttataagctcgttagaagaaaacgtgatgtgtttggtaacaaacttttttcatgagcttat 45900276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 5698149 - 5698225
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||| ||| |||||||||||||    
T  5698149 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttgataaaaagcttttctcac 5698225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 23259107 - 23259144
Alignment:
Q  119 ttagcttatagtttgttggactaacttataagtttgtt 156  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  23259107 ttagcttatagcttgttggactagcttataagtttgtt 23259144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 42628290 - 42628218
Alignment:
Q  124 ttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| |||||||||||||    
T  42628290 ttatagcttgttggactagcttataagcttgctttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 42628218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 1568 - 1487
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||| ||||    
T  1568 cttatagtttgttgaactagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaaacttttctcatgagcttat 1487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 6834119 - 6834038
Alignment:
Q  123 cttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||| ||||    
T  6834119 cttatagtttgttgaactagcttataagcttgttggatgaaaacgtgatgtgtttggtaacaaacttttctcatgagcttat 6834038  T

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Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 25023531 - 25023447
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| ||||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  25023531 tagcttatagcttgttggattagcttataagcttgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 25023447  T

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Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 20645681 - 20645752
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    ||||||||||||||||||| || |||||||| | ||| |||||||| |||| ||||||||||| ||||||||    
T  20645681 tagcttatagtttgttggattagcttataagctcgttagatgaaaatgtgacgtgtttggtaacaagctttt 20645752  T

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Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 21459018 - 21459118
Alignment:
Q  93 aggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttc 192  Q
    |||||||||||||||||||        |||||||||| ||||| || || |||||||| | ||||||||||||||||| ||||||| ||| |||||||||    
T  21459018 aggctgtgtttggtaacatagataagctagcttatagcttgttagattagcttataagctcgttggatgaaaacgtgacgtgtttgataacaagcttttc 21459117  T
Q  193 t 193  Q
    |    
T  21459118 t 21459118  T

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Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 12130477 - 12130588
Alignment:
Q  93 aggctgtgtttggtaacatnnnnnnnttagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttc 192  Q
    ||||||||||||||||||        ||||||||||| |||||||| || ||||||| |||||| ||||||||||||  ||||||||||| || |||||     
T  12130477 aggctgtgtttggtaacacaaaaaagttagcttatagcttgttggattagcttataaatttgttagatgaaaacgtggcgtgtttggtaacaaacttttt 12130576  T
Q  193 tcacgagtttat 204  Q
    ||| ||| ||||    
T  12130577 tcatgagcttat 12130588  T

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Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 18801723 - 18801807
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttg-gatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||||||||||||||| |||||  ||| |||| | || ||||||||||| ||||||||||||| |||||||    
T  18801723 tagcttatagcttgttggactaacttataagcttgttttgat-aaaatgagacgtgtttggtaaaaagcttttctcactagtttat 18801807  T

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Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 20992337 - 20992257
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||| || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  20992337 ttatagtttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 20992257  T

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Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 24119315 - 24119231
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  24119315 tagcttatagcttgttggattagcttataagctcgttagaagaaaacgtgacgtgtttggtaacaagcttttttcatgagcttat 24119231  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 18368810 - 18368734
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttg-ttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| ||| || ||| |||| | |||||||||||||| |||||||||||||    
T  18368810 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagatgtgtttggtaaaaagcttttctcac 18368734  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 13756392 - 13756312
Alignment:
Q  124 ttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||| |||||||| || |||||||| | ||| ||||||||||||  ||||||||||| |||||||| ||| ||| ||||    
T  13756392 ttatagcttgttggattagcttataagctcgttagatgaaaacgtggcgtgtttggtaacaagcttttttcatgagcttat 13756312  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 21778150 - 21778078
Alignment:
Q  132 tgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||| ||||||||||| | ||| ||||||||  || |||||||||||| |||||||| ||||||| ||||    
T  21778150 tgttggattaacttataagctcgttagatgaaaatctggtgtgtttggtaacaagcttttttcacgagcttat 21778078  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 22707314 - 22707385
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagctttt 191  Q
    |||||||||| |||||||| ||  ||||||| | ||| ||||||||||||| ||| ||||||| ||||||||    
T  22707314 tagcttatagcttgttggattagtttataagctcgttagatgaaaacgtgacgtgattggtaacaagctttt 22707385  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 1789810 - 1789886
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttg-gatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| |||||  ||| |||| | || ||||||||||| |||||||||||||    
T  1789810 tagcttatagcttgttggactagcttataagcttgttttgat-aaaatgagacgtgtttggtaaaaagcttttctcac 1789886  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 21860257 - 21860341
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || |||||||||  ||||||||||| ||| |||| ||| ||| ||||    
T  21860257 tagcttatagcttgttggattagcttataagctcgttagacgaaaacgtggcgtgtttggtaacaagtttttttcatgagcttat 21860341  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 24159261 - 24159297
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgtt 156  Q
    |||||||||||||||||||||| |||||||| |||||    
T  24159261 tagcttatagtttgttggactagcttataagcttgtt 24159297  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 32562487 - 32562451
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgtt 156  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  32562487 tagcttatagcttgttggactagcttataagtttgtt 32562451  T

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Target: scaffold0007 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 157691 - 157607
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||||||||| || || |||||||| | |||||||||||| |||| ||||||||||| |||||||||||| ||||||||    
T  157691 tagcttatagtttgttagattagcttataagctcgttggatgaaaatgtgacgtgtttggtaaaaagcttttctcatgagtttat 157607  T

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Target: scaffold0115 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 4172 - 4248
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| |||||  |  |||| | |||||||||||||| |||||||||||||    
T  4172 tagcttatagcttgttggactagcttataagcttgttttaataaaatgagatgtgtttggtaaaaagcttttctcac 4248  T

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Target: scaffold0115; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 11912 - 11988
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcac 196  Q
    |||||||||| ||||||||||| |||||||| |||||  |  |||| | |||||||||||||| |||||||||||||    
T  11912 tagcttatagcttgttggactagcttataagcttgttttaataaaatgagatgtgtttggtaaaaagcttttctcac 11988  T

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Target: scaffold0330 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 7014 - 7098
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||||||| | || ||||||| || ||| ||||||||||||  ||||||||||| || ||||| ||| ||| ||||    
T  7014 tagcttatagtttgttgaattagcttataaattcgttagatgaaaacgtggcgtgtttggtaacaaacttttttcatgagcttat 7098  T

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Target: scaffold0076 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 14267 - 14183
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    ||||||||||||| ||||| ||  ||||||| | ||| ||||||||||||| ||||||||||| || ||||| ||| ||| ||||    
T  14267 tagcttatagtttattggattagattataagctcgttagatgaaaacgtgacgtgtttggtaacaaacttttttcatgagcttat 14183  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 57925 - 57841
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgttggatgaaaacgtgatgtgtttggtaataagcttttctcacgagtttat 204  Q
    |||||||||| |||||||| || |||||||| | ||| || ||||| |||  ||||||||||| |||||||| ||| ||| ||||    
T  57925 tagcttatagcttgttggattagcttataagctcgttagacgaaaatgtggcgtgtttggtaacaagcttttttcatgagcttat 57841  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 76267 - 76303
Alignment:
Q  120 tagcttatagtttgttggactaacttataagtttgtt 156  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  76267 tagcttatagtttgttggactagcttataaatttgtt 76303  T

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