View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10502_low_10 (Length: 237)
Name: NF10502_low_10
Description: NF10502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10502_low_10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 32688383 - 32688147
Alignment:
| Q |
1 |
acatatgagaatattcatggatctgctaatatgaccaacactggtcatgaatgagatcatttatataattaattgcggtccagaagagttattggataat |
100 |
Q |
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| T |
32688383 |
acatatgagaatattcatggatctgctaatatgaccaacactggtcatgaatgagatcatttatataattaattgcggtccagaagagttattggataat |
32688284 |
T |
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| Q |
101 |
tccattatctcaacccaaaacatatacaaaatataatctaatataactacagcaattaagtcaatgattttgtaccaaaccataatgaaaagatggaaga |
200 |
Q |
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| T |
32688283 |
tccattatctcaacccaaaacatatacaaaatataatctaatataactacagcaattaagtcaatgattttgtaccaaaccataatgaaaagatggaaga |
32688184 |
T |
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| Q |
201 |
gagaagttagttgctaaatcatttttgttcggtttct |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
32688183 |
gagaagttagttgctaaatcatttttgttcggtttct |
32688147 |
T |
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