View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10503_1 (Length: 595)
Name: NF10503_1
Description: NF10503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10503_1 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 550; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 550; E-Value: 0
Query Start/End: Original strand, 22 - 595
Target Start/End: Complemental strand, 6369021 - 6368449
Alignment:
| Q |
22 |
tacaacgagctgttaaatagggtgatacggagacgagtagacgccatcgtgtgattagtcgggatattattactcaaccaaagtgccatggtggtttggg |
121 |
Q |
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| T |
6369021 |
tacaacgagctgttaaatagggtgatacggagacgagtagacgccatcgtgtgattagtcgggatattattactcaaccaaagtgccatggtggtttggg |
6368922 |
T |
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| Q |
122 |
cattaggaaacttgatgtgatgaacaaggcttgtcttatgaaattgtgttggggagtttattcagagagaagtccgtatggagtgatgtattaagaggca |
221 |
Q |
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| T |
6368921 |
cattaggaaacttcatgtgatgaacaaggcttgtcttatgaaattgtgttggggagtttattcagagagaagtccgtatggagtgatgtattaagaggca |
6368822 |
T |
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| Q |
222 |
aatatcaaagggatactgattttgtgacaatgattcagtttcagctaggccttcagactcgaagcttgtggaaagtgatggtgaaactttggccagaaat |
321 |
Q |
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| T |
6368821 |
aatatcaaagggatactgattttgtgacaatgattcagtttcagctaggtcttcagactcgaagcttgtggaaagtgatggtgaaactttggccagaaat |
6368722 |
T |
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| Q |
322 |
agtgcgtaatagtttttggtcaattggtaatggaaaaaatattgatgcttggaaacaaaatatgcttgattctgatatgaacatctccgaactaagtatc |
421 |
Q |
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| T |
6368721 |
agtgcgtaatagtttttggtcaattggtaatggaaaaaatattgatgcttggaaacaaaataagcttgattctgatatgaacatctccgaactaagtatc |
6368622 |
T |
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| Q |
422 |
gttatcctttaggaattattaggtgcaaaggttgcagacttaacatatgtgaaatagtgattggaattggttgatgcttgagcagtggctgccatcagat |
521 |
Q |
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| T |
6368621 |
gttatcctttaggaattattaggtgcaaaggttgcagacttaacatatgtg-aatagtgattggaattggttgatgcttgagcagtggctgccatcagat |
6368523 |
T |
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| Q |
522 |
gttttgcataaaattcaagcaatgacacctccaaatagttccttcttatattgcttaacgttggggggtgtatg |
595 |
Q |
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| T |
6368522 |
gttttgcataaaattcaagcaatgacacctccaaatagttccttcttatattgctcaacgttggggggtgtatg |
6368449 |
T |
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