View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10503_low_3 (Length: 310)
Name: NF10503_low_3
Description: NF10503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10503_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 19 - 299
Target Start/End: Original strand, 54745626 - 54745906
Alignment:
| Q |
19 |
catcaggtccaaatgcacttttggttgcatcaaatatcataaacactattgatgctgtgagtcaaaaattgagtcatgagtcacccatgtttcagttttt |
118 |
Q |
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| T |
54745626 |
catcaggtccaaatgcacttttggtagcatcaaatatcataaacactattgatgctgtgagtcaaaaattgagtcatgagtcacccatgtttcagttttt |
54745725 |
T |
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| Q |
119 |
cctcaatgacctatttggaaatgacttcaataccacttttaagttactccctgattttataaaaatactacaagaagagaaaggacaaaagtttagtcca |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
54745726 |
cctcaatgacctatttggaaatgacttcaataccacttttaagttactacctgattttataaaaagactacaagaagagaaaggacaaaagtttagtcca |
54745825 |
T |
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| Q |
219 |
tgtttctttagtggaacacctgggtctttttatgggagactcttccccgacaattccattcacttttttcattcctcctat |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54745826 |
tgtttctttagtggaacacctgggtctttttatgggagactcttccccgacaattccattcacttttttcattcctcctat |
54745906 |
T |
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