View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10505_low_17 (Length: 251)
Name: NF10505_low_17
Description: NF10505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10505_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 37054284 - 37054520
Alignment:
| Q |
1 |
caaaactttcaggtttatcaaagtacatgggattcttatttgttccaataaatgcccagaatatctgttaaagtacaagttcacaaatgatttagtaaca |
100 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37054284 |
caaaactttcaggtttatcaaagtacttgggattcttatttgttccaataaatgcccagaatatctgttaaagtacaagttcacaaatgatttagtaaca |
37054383 |
T |
|
| Q |
101 |
atttaagttacatgttactactttttaatgaatataggcaatatatatcttaatatattatgatgaattcaatttgaaggtaccttccatccctttggaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37054384 |
atttaagttacatgttactactttttaatgaatataggca----atatcttaatatattatgatgaattcaatttgaaggtaccttccatccctttggaa |
37054479 |
T |
|
| Q |
201 |
tggtaaagccttcataggtgaaatctgttttagcctctctg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
37054480 |
tggtaaagccttcataggtgaaatctgttttagcctctctg |
37054520 |
T |
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