View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10505_low_4 (Length: 359)
Name: NF10505_low_4
Description: NF10505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10505_low_4 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 327; Significance: 0; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 18 - 348
Target Start/End: Original strand, 26675296 - 26675626
Alignment:
| Q |
18 |
aattccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaactt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26675296 |
aattccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaactt |
26675395 |
T |
|
| Q |
118 |
gaattattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26675396 |
gaattattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatat |
26675495 |
T |
|
| Q |
218 |
cacaatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtgcatt |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26675496 |
cacaatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtgcatt |
26675595 |
T |
|
| Q |
318 |
tgatgagagattttcagctaaagaacccttt |
348 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |
|
|
| T |
26675596 |
tgatgagaggttttcagctaaagaacccttt |
26675626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 21 - 344
Target Start/End: Complemental strand, 26732093 - 26731770
Alignment:
| Q |
21 |
tccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26732093 |
tccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
26731994 |
T |
|
| Q |
121 |
ttattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatcac |
220 |
Q |
| |
|
|||| |||||||||||| |||| || |||||||||||||||||| ||| |||||| |||||||||||||||| ||||||||||| |||||||| |||| |
|
|
| T |
26731993 |
ttatcaagattgttcctttgtagtaacttagacaacccaaaatccgctaccttgggttggtaatcagagtcaattagtatgttttgcggctttatgtcac |
26731894 |
T |
|
| Q |
221 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtgcatttga |
320 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
26731893 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagacactttgcagttccgagagcaattttatacctcttaccccaattaagtgcatttga |
26731794 |
T |
|
| Q |
321 |
tgagagattttcagctaaagaacc |
344 |
Q |
| |
|
||| | ||| || ||||||||||| |
|
|
| T |
26731793 |
tgacaaattatccgctaaagaacc |
26731770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 21 - 344
Target Start/End: Complemental strand, 26690782 - 26690459
Alignment:
| Q |
21 |
tccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26690782 |
tccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
26690683 |
T |
|
| Q |
121 |
ttattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatcac |
220 |
Q |
| |
|
|||| |||||||||||| |||| || |||||||||||||||||| ||| |||||| |||||| |||||||| ||||||||||| |||||||| |||| |
|
|
| T |
26690682 |
ttatcaagattgttcctttgtagtaacttagacaacccaaaatccgctaccttgggttggtaattggagtcaattagtatgttttgcggctttatgtcac |
26690583 |
T |
|
| Q |
221 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtgcatttga |
320 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
26690582 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagacactttgcagttccgagagcaattttatacctcttaccccaattaagtgcatttga |
26690483 |
T |
|
| Q |
321 |
tgagagattttcagctaaagaacc |
344 |
Q |
| |
|
||| | ||| || ||||||||||| |
|
|
| T |
26690482 |
tgacaaattatccgctaaagaacc |
26690459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 21 - 344
Target Start/End: Complemental strand, 26694943 - 26694620
Alignment:
| Q |
21 |
tccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
120 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26694943 |
tccatagctataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtcccatgtaacctcttgttcctctcatccttgagaaacttgaa |
26694844 |
T |
|
| Q |
121 |
ttattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatcac |
220 |
Q |
| |
|
|||| || ||||||||| |||| || |||||||||||||||||| ||| |||||| |||||| |||||||| ||||||||||| |||||||| |||| |
|
|
| T |
26694843 |
ttatcaaaattgttcctttgtactaacttagacaacccaaaatccgctaccttgggttggtaattggagtcaattagtatgttttgcggctttatgtcac |
26694744 |
T |
|
| Q |
221 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtgcatttga |
320 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||| || |||||||||||||||| ||| |||||||| |
|
|
| T |
26694743 |
aatgcaaaatccactccaaacattcttcatgtaaataggcaagacactttgcagttccgagagcaattttgtacctcttaccccaattaagcgcatttga |
26694644 |
T |
|
| Q |
321 |
tgagagattttcagctaaagaacc |
344 |
Q |
| |
|
||| | ||| |||| ||||||||| |
|
|
| T |
26694643 |
tgacaaattatcagttaaagaacc |
26694620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 21 - 340
Target Start/End: Original strand, 26698511 - 26698830
Alignment:
| Q |
21 |
tccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
120 |
Q |
| |
|
|||||| ||||||||||| || || ||||| ||| ||| |||||||| ||||||||||||||||||||||||||| |||| ||||| |||||| ||||| |
|
|
| T |
26698511 |
tccatagctataaacatccacttttgaagtaatttgcatgttgaaaacccattcaggtgccatgtaacctcttgtccctcgaatcctcgagaaatttgaa |
26698610 |
T |
|
| Q |
121 |
ttattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatcac |
220 |
Q |
| |
|
|||| ||| | ||||||| |||||||||||||| ||||||||| ||| || ||| | ||||| ||||||| |||||||||||| ||||||||||| | |
|
|
| T |
26698611 |
ttatcaaggtcattcctattcaatagcttagacaaaccaaaatctgctaccttaggttgataatccgagtcaacaagtatgttttgtggctttatatcgc |
26698710 |
T |
|
| Q |
221 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtgcatttga |
320 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||| |||||| ||||||| ||||| | ||||||||||||||| ||||||||||||||| || |||| |
|
|
| T |
26698711 |
aatgcaaaatccactccaaacactcttcgtgtaaataagcaagaccctttgcagttcccatagcaatgttataccttttaccccaatcaagttcacttga |
26698810 |
T |
|
| Q |
321 |
tgagagattttcagctaaag |
340 |
Q |
| |
|
||||||||| |||||||||| |
|
|
| T |
26698811 |
tgagagattatcagctaaag |
26698830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 21 - 340
Target Start/End: Original strand, 26733674 - 26733993
Alignment:
| Q |
21 |
tccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
120 |
Q |
| |
|
|||||| ||||||||||| || || ||||| ||| ||| |||||||| ||||||||||||||||||||||||||| |||| ||||| |||||| ||||| |
|
|
| T |
26733674 |
tccatagctataaacatccacttttgaagtaatttgcatgttgaaaacccattcaggtgccatgtaacctcttgtccctcgaatcctcgagaaatttgaa |
26733773 |
T |
|
| Q |
121 |
ttattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatcac |
220 |
Q |
| |
|
|||| ||| | ||||||| |||||||||||||| ||||||||| ||| || ||| | ||||| ||||||| |||||||||||| ||||||||||| | |
|
|
| T |
26733774 |
ttatcaaggtcattcctattcaatagcttagacaaaccaaaatctgctaccttaggttgataatccgagtcaacaagtatgttttgtggctttatatcgc |
26733873 |
T |
|
| Q |
221 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtgcatttga |
320 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||| |||||| ||||||| ||||| | ||||||||||||||| ||||||||||||||| || |||| |
|
|
| T |
26733874 |
aatgcaaaatccactccaaacactcttcgtgtaaataagcaagaccctttgcagttcccatagcaatgttataccttttaccccaatcaagttcacttga |
26733973 |
T |
|
| Q |
321 |
tgagagattttcagctaaag |
340 |
Q |
| |
|
||||||||| |||||||||| |
|
|
| T |
26733974 |
tgagagattatcagctaaag |
26733993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 21 - 348
Target Start/End: Original strand, 26750835 - 26751162
Alignment:
| Q |
21 |
tccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
120 |
Q |
| |
|
|||||| |||||||| || || || ||||||||| ||| |||||||| ||||||||||||||||||||||||||| |||| ||||| |||||| ||||| |
|
|
| T |
26750835 |
tccatagctataaacgtccactttagaagtgatttgcatgttgaaaacccattcaggtgccatgtaacctcttgtccctcgaatcctcgagaaatttgaa |
26750934 |
T |
|
| Q |
121 |
ttattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatcac |
220 |
Q |
| |
|
|||| ||| | | ||||| |||||||| |||| |||||||| ||| || ||| ||||||| ||||||| |||||||||||| || |||||||| | |
|
|
| T |
26750935 |
ttatcaaggtcatccctattcaatagcttggacagaccaaaatcagctaccttcggttggtaatcggagtcaacaagtatgttttgcggttttatatcgc |
26751034 |
T |
|
| Q |
221 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtgcatttga |
320 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||| ||||||| ||||| | ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26751035 |
aatgcaaaatccactccaaacattcttcgtgtaaatacgcaagtccctttgcagttcccatagcaatgttatacctcttaccccaatcaagttcatttga |
26751134 |
T |
|
| Q |
321 |
tgagagattttcagctaaagaacccttt |
348 |
Q |
| |
|
||||||||| |||||||||| ||||||| |
|
|
| T |
26751135 |
tgagagattatcagctaaagtacccttt |
26751162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 21 - 340
Target Start/End: Original strand, 26736899 - 26737218
Alignment:
| Q |
21 |
tccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
120 |
Q |
| |
|
|||||| ||||||||||| || || ||||||||| ||| |||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| ||||| |
|
|
| T |
26736899 |
tccatagctataaacatccacttttgaagtgatttgcatgttgaaaacccattcaggtgccatgtaacctcgtgtccctcgaatccttgagaagtttgaa |
26736998 |
T |
|
| Q |
121 |
ttattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatcac |
220 |
Q |
| |
|
|||| | | | ||||| | |||||||||||||| ||||||||| | | || ||||| ||||||||||||| |||||||||||| ||||||||||| | |
|
|
| T |
26736999 |
ttatcatgctcattcctgttcaatagcttagacaaaccaaaatctgcaaccttaggtcgataatcagagtcaacaagtatgttttgcggctttatatcgc |
26737098 |
T |
|
| Q |
221 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtgcatttga |
320 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |||||| ||||| ||||||| |||||| ||| ||||| |||||||||||| ||||||| |
|
|
| T |
26737099 |
aatgcaaaatccactccaaacactcttcatgtaaataagcaagacattttgcagttcctatagcaataccatatctctttccccaatcaagttcatttga |
26737198 |
T |
|
| Q |
321 |
tgagagattttcagctaaag |
340 |
Q |
| |
|
||||||||| |||||||||| |
|
|
| T |
26737199 |
tgagagattatcagctaaag |
26737218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 21 - 340
Target Start/End: Original strand, 26743910 - 26744229
Alignment:
| Q |
21 |
tccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
120 |
Q |
| |
|
|||||| ||||||||||| || || ||||||||| || |||||||| ||| ||||||||||||||||||||||| |||| ||||| ||||| ||||| |
|
|
| T |
26743910 |
tccatagctataaacatccacttttgaagtgatttccatgttgaaaacccactcaggtgccatgtaacctcttgtccctcgaatcctcgagaattttgaa |
26744009 |
T |
|
| Q |
121 |
ttattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatcac |
220 |
Q |
| |
|
| || || | || ||||| ||||||||| ||||| |||||||| ||| || ||| ||||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
26744010 |
tgatcaaagtcgtccctatttaatagcttggacaaaccaaaatccgctaccttcggttggtaatcagagtcaacaagtatgttttgcggctttatatcac |
26744109 |
T |
|
| Q |
221 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtgcatttga |
320 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||| ||||||| ||||| | ||||||||||||||| |||| |||||||||| |||||| |
|
|
| T |
26744110 |
aatgcaaaatccactccaaacattcttcgtgtaaataagcaaggccctttgcagttcccatagcaatgttataccttttactccaatcaagtttatttga |
26744209 |
T |
|
| Q |
321 |
tgagagattttcagctaaag |
340 |
Q |
| |
|
||| ||||| || ||||||| |
|
|
| T |
26744210 |
tgaaagattatcggctaaag |
26744229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 21 - 340
Target Start/End: Original strand, 26713663 - 26713982
Alignment:
| Q |
21 |
tccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaa |
120 |
Q |
| |
|
|||||| ||||||||||| || || ||||||||| ||| |||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| ||||| |
|
|
| T |
26713663 |
tccatagctataaacatccacttttgaagtgatttgcatgttgaaaacccattcaggtgccatgtaacctcgtgtccctcgaatccttgagaagtttgaa |
26713762 |
T |
|
| Q |
121 |
ttattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatcac |
220 |
Q |
| |
|
|||| | | | ||||| | |||||||||||||| ||||||||| | | || ||||| |||||| |||||| |||||||||||| ||||||||||| | |
|
|
| T |
26713763 |
ttatcatgctcattccttttcaatagcttagacaaaccaaaatctgcaaccttaggtcgataatcatagtcaacaagtatgttttgcggctttatatcgc |
26713862 |
T |
|
| Q |
221 |
aatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtgcatttga |
320 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |||||| ||||| ||||||| |||||| ||| ||||| |||||||||||| ||||||| |
|
|
| T |
26713863 |
aatgcaaaatccactccaaacactcttcatgtaaataagcaagacattttgcagttcctatagcaataccatatctctttccccaatcaagttcatttga |
26713962 |
T |
|
| Q |
321 |
tgagagattttcagctaaag |
340 |
Q |
| |
|
| ||||||| |||||||||| |
|
|
| T |
26713963 |
taagagattatcagctaaag |
26713982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 47212252 - 47212304
Alignment:
| Q |
199 |
atgttttgaggctttatatcacaatgcaaaatccactccaaacattcttcatg |
251 |
Q |
| |
|
|||||||| ||||| | ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
47212252 |
atgttttgtggcttcacatcacaatgcaaaatccactccaaacactcttcatg |
47212304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 47212117 - 47212153
Alignment:
| Q |
64 |
aaaatccattcaggtgccatgtaacctcttgttcctc |
100 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |
|
|
| T |
47212117 |
aaaatccactcaggtgccatgtaacctcttgttcctc |
47212153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 260
Target Start/End: Complemental strand, 21108565 - 21108324
Alignment:
| Q |
19 |
attccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttg |
118 |
Q |
| |
|
|||||||||||||||||||| ||||| || || |||||||| ||||||||||||||||||||||| || |||||||||||||| ||| |||||| | || |
|
|
| T |
21108565 |
attccataactataaacatccaccttagatgttattggcaaattgaaaatccattcaggtgccatataccctcttgttcctctaatcattgagatgcatg |
21108466 |
T |
|
| Q |
119 |
aattattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatc |
218 |
Q |
| |
|
|||||||||| |||||||| | | ||||| ||||| |||||||| ||| ||||| || | | ||| |||| |||||||||||| ||||||||||| |
|
|
| T |
21108465 |
aattattaaggttgttcctgttttgcagctttgacaatccaaaatcggctaacttgggctggaagttagaatcaagaagtatgttttgtggctttatatc |
21108366 |
T |
|
| Q |
219 |
acaatgcaaaatccactccaaacattcttcatgtaaatatgc |
260 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
21108365 |
acaatgcaaaatccactccaaacattcttcatgtagatatgc |
21108324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 22 - 313
Target Start/End: Original strand, 21123132 - 21123426
Alignment:
| Q |
22 |
ccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaat |
121 |
Q |
| |
|
||||||||||||||||| || || || || ||||| || ||| ||||||||||||| ||||| || |||||||||||||| ||| ||||||| ||||| |
|
|
| T |
21123132 |
ccataactataaacatccactttagatgttattggtaaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattctgaat |
21123231 |
T |
|
| Q |
122 |
tatta---agattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatc |
218 |
Q |
| |
|
||||| |||||||| || | ||||||||||| ||||||||| ||| |||||| | | | ||| |||| |||||| ||||||||||||||||| |
|
|
| T |
21123232 |
tattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggttgaaagttagaatcaagaagtatattttgaggctttatatc |
21123331 |
T |
|
| Q |
219 |
acaatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtg |
313 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||| |||||| | | || ||||||| |||||| | |||||| |||| ||||||||||| |
|
|
| T |
21123332 |
acaatgcaaaatccactccatacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtg |
21123426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 260
Target Start/End: Complemental strand, 21098946 - 21098705
Alignment:
| Q |
19 |
attccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttg |
118 |
Q |
| |
|
|||||||| |||||||||||||| || || || |||||||| |||||||||||||| || ||||| || |||||||||||||| ||| | || | ||||| |
|
|
| T |
21098946 |
attccatagctataaacatctactttagatgttattggcaaattgaaaatccattctggggccatataccctcttgttcctctaatcatagatacacttg |
21098847 |
T |
|
| Q |
119 |
aattattaagattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatc |
218 |
Q |
| |
|
|||| || |||||||| || | | ||||||||||| |||||||| ||| |||||| | | | ||| |||| |||||| ||||| ||||||||||| |
|
|
| T |
21098846 |
aattgttgagattgtttctgttttgcagcttagacaatccaaaatccgctaacttgggttcgaagttagaatcaagaagtatattttgcggctttatatc |
21098747 |
T |
|
| Q |
219 |
acaatgcaaaatccactccaaacattcttcatgtaaatatgc |
260 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||| |||||| |
|
|
| T |
21098746 |
acaatgtaaaatccattccaaacattcttcatgtagatatgc |
21098705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 25 - 313
Target Start/End: Original strand, 21130263 - 21130554
Alignment:
| Q |
25 |
taactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaattat |
124 |
Q |
| |
|
|||||||||||||| || || || || ||||| || ||||||||||| ||||||||||| || |||| ||||||||| ||| ||||||| | |||| ||| |
|
|
| T |
21130263 |
taactataaacatccactttagatgttattggtaaattgaaaatccactcaggtgccatatatcctcgtgttcctctaatcattgagaatcctgaactat |
21130362 |
T |
|
| Q |
125 |
ta---agattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatcaca |
221 |
Q |
| |
|
|| |||||||| | || | |||||||||||| |||||||| ||| ||||| | | | ||| |||| |||||| |||||||||||||||||||| |
|
|
| T |
21130363 |
tatcgagattgtttcgattttgtagcttagacaatccaaaatcggctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatcaca |
21130462 |
T |
|
| Q |
222 |
atgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtg |
313 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||| | | | | || ||||||| |||||| | |||||| ||| ||||||||||| |
|
|
| T |
21130463 |
atgcaaaatccattccaaacattcttcatgtagatatgctaaaactctagctgttcctaaagcaatatcataccttttagtccaatcaagtg |
21130554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 313
Target Start/End: Original strand, 18658422 - 18658716
Alignment:
| Q |
22 |
ccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaat |
121 |
Q |
| |
|
||||||| ||||||||| || || || || |||||||| ||||||||||| ||||| ||||| || |||||||||||||| ||| ||||||| ||||| |
|
|
| T |
18658422 |
ccataaccataaacatccactttagatgttattggcaaattgaaaatccactcaggggccatatatcctcttgttcctctaatcattgagaattctgaat |
18658521 |
T |
|
| Q |
122 |
tatta---agattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatc |
218 |
Q |
| |
|
||||| ||| |||| | | |||||||| || ||||||||| ||| || || | | | ||| |||| |||||||||||||||||||||||| |
|
|
| T |
18658522 |
tattattaagactgtttcgggttttcagcttagataatccaaaatctgctaacttagggtgaaagttagaatcaagaagtatgttttgaggctttatatc |
18658621 |
T |
|
| Q |
219 |
acaatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtg |
313 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| ||| || ||| | || || ||||||| |||||| | |||||| |||| ||| ||||||| |
|
|
| T |
18658622 |
acaatgcaaaatccattccaaacattcttcatgtagataagctagaactttagctgttcctaaagcaatatcataccttttactccagtcaagtg |
18658716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 313
Target Start/End: Original strand, 21111300 - 21111594
Alignment:
| Q |
22 |
ccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaat |
121 |
Q |
| |
|
||||||||||||||||| || || || || ||||| | ||| ||||||||||||| ||||| || |||||||||||||| ||| ||||||| ||||| |
|
|
| T |
21111300 |
ccataactataaacatccactttagatgttattggtgaattggaaatccattcaggggccatatatcctcttgttcctctaatcattgagaattctgaat |
21111399 |
T |
|
| Q |
122 |
tatta---agattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatc |
218 |
Q |
| |
|
||||| |||||||| || | ||||||||||| ||||||||| ||| ||||| | | | ||| |||| |||||| ||||||||||||||||| |
|
|
| T |
21111400 |
tattattaagattgtttctgcttttcagcttagacaatccaaaatctgctaacttgggctgaaagttagaatcaagaagtatattttgaggctttatatc |
21111499 |
T |
|
| Q |
219 |
acaatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaagtg |
313 |
Q |
| |
|
||||||||| ||||| || | |||||||||||||| ||| |||||| | | || ||||||| |||||| | |||||| |||| ||||||||||| |
|
|
| T |
21111500 |
acaatgcaatatccattcgagacattcttcatgtagataagcaagaactctagctgttcctaaagcaatatcataccttttactccaatcaagtg |
21111594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 29213014 - 29213065
Alignment:
| Q |
199 |
atgttttgaggctttatatcacaatgcaaaatccactccaaacattcttcat |
250 |
Q |
| |
|
|||||||| ||||| | ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
29213014 |
atgttttgtggcttcacatcacaatgcaaaatccactccaaacactcttcat |
29213065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 29212879 - 29212911
Alignment:
| Q |
64 |
aaaatccattcaggtgccatgtaacctcttgtt |
96 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |
|
|
| T |
29212879 |
aaaatccactcaggtgccatgtaacctcttgtt |
29212911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 311
Target Start/End: Complemental strand, 39132476 - 39132184
Alignment:
| Q |
22 |
ccataactataaacatctaccttggaagtgattggcaagttgaaaatccattcaggtgccatgtaacctcttgttcctctcatccttgagaaacttgaat |
121 |
Q |
| |
|
||||||||||||||||| || || || || ||||| || ||||||| ||||||||| ||||| || |||||||||||||| ||| ||||||| ||||| |
|
|
| T |
39132476 |
ccataactataaacatccactttagatgttattggtaaattgaaaacccattcaggagccatatatcctcttgttcctctaatcattgagaattctgaat |
39132377 |
T |
|
| Q |
122 |
tatta---agattgttcctatgtaatagcttagacaacccaaaatctactattttgggtcggtaatcagagtcaataagtatgttttgaggctttatatc |
218 |
Q |
| |
|
|| || | |||||| |||| | ||||||||||| ||||| ||| ||| |||||| | || | ||| |||| |||||| ||||||||||||||||| |
|
|
| T |
39132376 |
tactattgacattgtttctatttctcagcttagacaatccaaagtctgctaacttgggttgatagttagaatcaagaagtatattttgaggctttatatc |
39132277 |
T |
|
| Q |
219 |
acaatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgcggttcctagagcaatgttatacctcttaccccaatcaag |
311 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||| || || | | || ||||||| |||||| | |||||| |||| ||||||||| |
|
|
| T |
39132276 |
acaatgtaaaatccactccaaacattcttcatgtagataagctaggactctagctgttcctaaagcaatatcataccttttactccaatcaag |
39132184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 11791094 - 11791167
Alignment:
| Q |
199 |
atgttttgaggctttatatcacaatgcaaaatccactccaaacattcttcatgtaaatatgcaagagcctttgc |
272 |
Q |
| |
|
||||||| ||||| |||||||||||||||| ||| |||||||| || ||||||| ||| |||| |||| |||| |
|
|
| T |
11791094 |
atgttttctggcttaatatcacaatgcaaaacccattccaaacactcctcatgtagatacgcaatagcccttgc |
11791167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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