View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10506_low_13 (Length: 240)
Name: NF10506_low_13
Description: NF10506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10506_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 38728592 - 38728822
Alignment:
| Q |
1 |
tatttttgcagccataaccaaaaggagtagaagtaccagcttgaagtttctctgaagagttttttgagaaaaactctgttccttcattttccaaccttga |
100 |
Q |
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| T |
38728592 |
tatttttgcagccataaccaaaaggagtagaagtaccagcttgaagtttctctgtagagttttttgagaaaaactctgttccttcattttccaaccttga |
38728691 |
T |
|
| Q |
101 |
aataacctcctttggtataccatgattcaccaccttnnnnnnnccatattcttcgcaagctttcacaactaattccgacaactctgaccgttccatggaa |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
38728692 |
aataacctcctttggtataccatgattcaccaccttaaaaaaaccatattcttcgcaagctttcacaactaattccgacaactctgacctttccatggaa |
38728791 |
T |
|
| Q |
201 |
aggtcaattgtcggaattcccacagcctttg |
231 |
Q |
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||||||||||||||||||||||| ||||||| |
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| T |
38728792 |
aggtcaattgtcggaattcccacggcctttg |
38728822 |
T |
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