View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10507_high_2 (Length: 240)
Name: NF10507_high_2
Description: NF10507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10507_high_2 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 7609763 - 7609524
Alignment:
| Q |
1 |
attacaaaacagaaaagttactaaaagtgctgcaacaaaaaatctattttctgttagaagaggttgagtgtcaaacatacattgttaactaatgatattc |
100 |
Q |
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| T |
7609763 |
attacaaaacagaaaagttactaaaagtgctgcaacaaaaaatctattttctgttagaagaggttgagtgtcaaacatacattgttaactaatgatattc |
7609664 |
T |
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| Q |
101 |
gagaatctattttctaatgatcacaaagagaagaggaagctagaactcttgcctatgccaaaagtacatatccgcggtgtccgaactgattgcccacttg |
200 |
Q |
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| T |
7609663 |
gagaatctattttctaatgatcacaaagagaagaggaagctagaactcttgcctatgccaaaagtacatatccgcggtgtccgaactgaatgcccacttg |
7609564 |
T |
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| Q |
201 |
ttacatagcttttcacaaattcacatatcgctctttcatc |
240 |
Q |
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||||||||||||||||||||||||||||| |||||||||| |
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| T |
7609563 |
ttacatagcttttcacaaattcacatatctctctttcatc |
7609524 |
T |
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