View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10507_low_1 (Length: 389)
Name: NF10507_low_1
Description: NF10507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10507_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 17 - 378
Target Start/End: Original strand, 29421936 - 29422296
Alignment:
| Q |
17 |
ttttgatgatcacattcagtttcatatggttttggacnnnnnnnggttttgaaataagtgtgagtatgttgtttgatgatttgtaggctgctaagttgag |
116 |
Q |
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| T |
29421936 |
tttttatgatcacattcagtttcatatggttttggactttttttggttttgaaataagtgtgactatgttgtttgatgatttgcaggctgccaagttgag |
29422035 |
T |
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| Q |
117 |
atggccagacttgtttgacagtgtggattcagccacagaagattggattgttgaacagatgattaaagtaaataaatttaattatggctagttttgtttt |
216 |
Q |
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| T |
29422036 |
atggcctgacttgtttggcagtgtggattcatccacagaagattggattgttgaacagatgattaaagtaaataaatataattatggctagttttgtttt |
29422135 |
T |
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| Q |
217 |
attttatcttgtcttgttattactttttggttattctacatttctactccaaattagagtttaactgtgttggtagccaagcactgctagaggtgaaaca |
316 |
Q |
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| T |
29422136 |
attttatcttgtcttgttattactttttggttattgtacatttctactccaaattagag-aaaactgtgttggtagccaagcactgctagaggtgaaaca |
29422234 |
T |
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| Q |
317 |
atcttgaattcactagcaggaaactacttaatttatttgaagttgaacttaagttttttcat |
378 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29422235 |
atcttgaattcactagcaggaaactacttaatttatttgaagttgaacttaagttttttcat |
29422296 |
T |
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