View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10508_low_8 (Length: 259)
Name: NF10508_low_8
Description: NF10508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10508_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 22 - 243
Target Start/End: Complemental strand, 9502777 - 9502556
Alignment:
| Q |
22 |
aaacacccttccatcaccctctcccaatcccattccctatcctcccaacacatctcgacctcctccgccacaatcctatacaacctctctctacacgaca |
121 |
Q |
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| T |
9502777 |
aaacacccttccatcaccctctcccaatcccattccctatcctcccaaaacatctcaacctcctccgccacaatcctatacaacctctctctacacgaca |
9502678 |
T |
|
| Q |
122 |
ccgccacctgagcaccaccgtgaccatcataaacaccgaagaaatcacacttctctccatccttcatcgtaaaacctatccccacactcaccgcatcctc |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |
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| T |
9502677 |
ccgccacctgagcaccaccgtgaccatcataaacaccgaagaaatcacacttctctccatccttcatcgtaaaacctatctccatactcaccgcatcctc |
9502578 |
T |
|
| Q |
222 |
catttccttcctacagcctatg |
243 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
9502577 |
catttccttcctacagcctatg |
9502556 |
T |
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