View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10513_low_3 (Length: 382)
Name: NF10513_low_3
Description: NF10513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10513_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 16 - 364
Target Start/End: Original strand, 38684826 - 38685174
Alignment:
| Q |
16 |
gacatcaagcatgaaaaccaaaggagaaccacaatcatcatcaccaacaacaatcttcccagccctaacattctccccatcgccccacacatctccaacc |
115 |
Q |
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| T |
38684826 |
gacatcaagcatgaaaaccaaaggagaaccacaatcatcatcaccaacaacaatcttcccagccctaacattctccccatcgccccacacatctccaacc |
38684925 |
T |
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| Q |
116 |
tcacgccacaaaccatcctccaatcccatcaccaccgcatctctacaatactcatccaccggaaacacccccgaaaccgtcatggaaccactataaccac |
215 |
Q |
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| T |
38684926 |
tcacgccacaaaccatcctccaatcccatcaccaccgcatctctacaatactcatccaccggaaacacccccgaaaccgtcatggaaccactataaccac |
38685025 |
T |
|
| Q |
216 |
caaccaccctaaactccctctctcccctctccacaaatccaacacacccggcacgaaaacacggcaacggatccatttcctcccaccgatcctcctccac |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38685026 |
caaccaccctaaactccctctctcccctctccacaaatccaacacacccggcacgaaaacacggcaacggatccatttcctcccaccgatcctcctccac |
38685125 |
T |
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| Q |
316 |
atcgtaacgctccaccgccctaatcctcgatcccgccgctccaaatacc |
364 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38685126 |
atcgtaacgctccaccgccctaatcctcgatcccgccgctccaaatacc |
38685174 |
T |
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