View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10513_low_6 (Length: 323)

Name: NF10513_low_6
Description: NF10513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10513_low_6
NF10513_low_6
[»] chr1 (29 HSPs)
chr1 (19-318)||(42267674-42267973)
chr1 (146-304)||(17642009-17642168)
chr1 (146-305)||(11397894-11398053)
chr1 (146-304)||(26325756-26325915)
chr1 (178-304)||(49078058-49078185)
chr1 (148-301)||(2567223-2567377)
chr1 (146-303)||(41663861-41664019)
chr1 (146-304)||(8763935-8764094)
chr1 (146-304)||(10422732-10422891)
chr1 (142-304)||(31576548-31576711)
chr1 (148-210)||(5504070-5504132)
chr1 (146-304)||(17389716-17389874)
chr1 (146-304)||(2980936-2981095)
chr1 (178-304)||(5855466-5855593)
chr1 (142-304)||(9853278-9853440)
chr1 (146-217)||(16956498-16956569)
chr1 (178-304)||(18915811-18915938)
chr1 (178-304)||(33004052-33004179)
chr1 (178-304)||(48798107-48798234)
chr1 (146-212)||(4581687-4581753)
chr1 (146-248)||(9659184-9659286)
chr1 (230-304)||(31152660-31152734)
chr1 (235-304)||(41743217-41743286)
chr1 (180-304)||(50503400-50503525)
chr1 (142-304)||(30927728-30927892)
chr1 (146-248)||(26660138-26660240)
chr1 (142-216)||(10336549-10336623)
chr1 (179-216)||(18649390-18649427)
chr1 (268-304)||(33418243-33418279)
[»] chr3 (34 HSPs)
chr3 (146-304)||(45877397-45877556)
chr3 (146-304)||(15320129-15320288)
chr3 (150-304)||(29127862-29128017)
chr3 (146-304)||(25294903-25295062)
chr3 (146-304)||(26207806-26207965)
chr3 (146-305)||(7650169-7650329)
chr3 (146-210)||(47219182-47219246)
chr3 (178-304)||(32873586-32873712)
chr3 (178-305)||(47749142-47749269)
chr3 (146-304)||(54261169-54261328)
chr3 (142-217)||(55069680-55069755)
chr3 (146-300)||(3136699-3136853)
chr3 (226-304)||(10855327-10855405)
chr3 (226-304)||(13893869-13893947)
chr3 (150-304)||(47471775-47471929)
chr3 (142-216)||(50405604-50405678)
chr3 (148-304)||(29135856-29136013)
chr3 (152-300)||(30767258-30767407)
chr3 (152-304)||(33251605-33251758)
chr3 (235-304)||(42412869-42412938)
chr3 (146-304)||(928543-928702)
chr3 (241-300)||(22405644-22405703)
chr3 (146-217)||(23511598-23511669)
chr3 (146-304)||(29762160-29762319)
chr3 (146-212)||(3507538-3507604)
chr3 (142-200)||(19873420-19873478)
chr3 (146-204)||(28572216-28572274)
chr3 (143-217)||(35923625-35923699)
chr3 (178-216)||(43330769-43330807)
chr3 (235-305)||(46529965-46530035)
chr3 (146-212)||(49021208-49021274)
chr3 (142-204)||(50753342-50753404)
chr3 (147-204)||(26361973-26362030)
chr3 (268-304)||(48341963-48341999)
[»] chr7 (31 HSPs)
chr7 (142-301)||(1797409-1797569)
chr7 (146-304)||(48804629-48804788)
chr7 (178-304)||(4228790-4228914)
chr7 (178-302)||(34659174-34659299)
chr7 (178-305)||(4195238-4195366)
chr7 (146-305)||(3353370-3353529)
chr7 (150-304)||(17748390-17748545)
chr7 (178-304)||(26423323-26423450)
chr7 (146-305)||(43346783-43346943)
chr7 (142-304)||(13095804-13095967)
chr7 (146-301)||(24969330-24969484)
chr7 (150-304)||(42210270-42210425)
chr7 (146-304)||(22573759-22573917)
chr7 (178-304)||(4973146-4973273)
chr7 (142-300)||(23658130-23658288)
chr7 (150-300)||(42032046-42032197)
chr7 (146-204)||(48551904-48551962)
chr7 (178-305)||(43925457-43925585)
chr7 (146-304)||(10047880-10048039)
chr7 (178-304)||(14650263-14650390)
chr7 (146-304)||(43861976-43862135)
chr7 (225-304)||(45447916-45447995)
chr7 (227-301)||(5069901-5069975)
chr7 (146-212)||(38578871-38578937)
chr7 (142-212)||(39420876-39420946)
chr7 (146-212)||(41945512-41945578)
chr7 (146-216)||(44961642-44961712)
chr7 (178-212)||(49142705-49142739)
chr7 (235-304)||(19914796-19914865)
chr7 (180-304)||(47341822-47341947)
chr7 (268-304)||(5039545-5039581)
[»] chr2 (28 HSPs)
chr2 (142-301)||(21286390-21286550)
chr2 (178-304)||(21180350-21180477)
chr2 (142-300)||(7787003-7787162)
chr2 (146-304)||(29422158-29422317)
chr2 (146-280)||(2784900-2785034)
chr2 (142-294)||(25549681-25549834)
chr2 (146-305)||(41031910-41032069)
chr2 (146-304)||(7747217-7747376)
chr2 (146-304)||(8410074-8410233)
chr2 (147-301)||(37560119-37560274)
chr2 (142-304)||(42770651-42770814)
chr2 (142-300)||(24179518-24179674)
chr2 (146-212)||(25540408-25540474)
chr2 (152-304)||(10046487-10046639)
chr2 (147-212)||(28525460-28525525)
chr2 (178-304)||(2550811-2550938)
chr2 (146-204)||(20116616-20116674)
chr2 (146-305)||(12864166-12864326)
chr2 (146-297)||(39806889-39807041)
chr2 (253-304)||(14853479-14853530)
chr2 (178-304)||(18649062-18649189)
chr2 (178-304)||(38005345-38005472)
chr2 (151-304)||(5035231-5035385)
chr2 (147-304)||(6358156-6358314)
chr2 (146-212)||(10823096-10823162)
chr2 (146-304)||(20612538-20612699)
chr2 (179-304)||(34356149-34356275)
chr2 (146-211)||(34722717-34722782)
[»] chr8 (25 HSPs)
chr8 (146-305)||(45521115-45521274)
chr8 (142-300)||(18373961-18374120)
chr8 (146-304)||(15884560-15884718)
chr8 (146-304)||(2467122-2467281)
chr8 (150-304)||(8141049-8141204)
chr8 (146-304)||(14666075-14666234)
chr8 (142-304)||(44893278-44893441)
chr8 (178-304)||(29933720-29933846)
chr8 (178-304)||(33935771-33935898)
chr8 (178-304)||(6100419-6100546)
chr8 (178-300)||(17981392-17981515)
chr8 (178-304)||(583761-583886)
chr8 (146-304)||(14846523-14846681)
chr8 (150-204)||(43027353-43027407)
chr8 (178-300)||(33401835-33401958)
chr8 (150-265)||(36662391-36662506)
chr8 (235-306)||(38922508-38922579)
chr8 (146-212)||(4479300-4479366)
chr8 (194-304)||(30903283-30903393)
chr8 (151-216)||(3567940-3568005)
chr8 (227-304)||(6940505-6940582)
chr8 (244-305)||(10535506-10535567)
chr8 (235-304)||(13085471-13085540)
chr8 (256-305)||(17845679-17845728)
chr8 (148-304)||(24938568-24938725)
[»] chr5 (35 HSPs)
chr5 (146-304)||(42086271-42086430)
chr5 (146-304)||(8513463-8513622)
chr5 (146-304)||(41163464-41163622)
chr5 (146-304)||(1538375-1538534)
chr5 (146-304)||(20525782-20525941)
chr5 (146-212)||(42291509-42291575)
chr5 (146-250)||(21375350-21375454)
chr5 (146-304)||(5731924-5732083)
chr5 (178-304)||(19572668-19572795)
chr5 (179-305)||(24498926-24499052)
chr5 (142-212)||(39099779-39099849)
chr5 (146-304)||(42861222-42861381)
chr5 (142-216)||(3653914-3653988)
chr5 (147-280)||(11845806-11845940)
chr5 (178-248)||(38897755-38897825)
chr5 (146-212)||(43399165-43399231)
chr5 (147-216)||(41801010-41801079)
chr5 (254-306)||(23383590-23383642)
chr5 (153-217)||(24875377-24875441)
chr5 (140-304)||(37263185-37263349)
chr5 (146-304)||(30349523-30349682)
chr5 (146-212)||(9805041-9805107)
chr5 (226-304)||(18136365-18136443)
chr5 (150-204)||(27648433-27648487)
chr5 (183-304)||(28857072-28857194)
chr5 (235-304)||(6767145-6767214)
chr5 (235-304)||(7866525-7866594)
chr5 (235-304)||(9812816-9812885)
chr5 (235-304)||(12704958-12705027)
chr5 (178-251)||(25452923-25452996)
chr5 (147-204)||(27484206-27484263)
chr5 (235-304)||(35403606-35403675)
chr5 (142-210)||(6764457-6764525)
chr5 (178-218)||(14974360-14974400)
chr5 (229-301)||(18327717-18327789)
[»] chr4 (30 HSPs)
chr4 (146-305)||(33647668-33647828)
chr4 (146-304)||(24166398-24166557)
chr4 (146-304)||(29895735-29895894)
chr4 (146-304)||(38165975-38166134)
chr4 (178-304)||(1446774-1446901)
chr4 (179-304)||(53599008-53599134)
chr4 (178-306)||(47078404-47078533)
chr4 (146-304)||(2559255-2559414)
chr4 (178-304)||(3574482-3574609)
chr4 (142-304)||(8888970-8889133)
chr4 (146-217)||(14859327-14859398)
chr4 (146-216)||(6032647-6032717)
chr4 (150-212)||(43458654-43458716)
chr4 (142-212)||(49260665-49260735)
chr4 (146-211)||(40780865-40780930)
chr4 (142-231)||(46108713-46108802)
chr4 (237-305)||(4736544-4736612)
chr4 (268-304)||(26480076-26480112)
chr4 (228-304)||(41162969-41163045)
chr4 (142-217)||(14597900-14597975)
chr4 (235-306)||(34667696-34667767)
chr4 (146-217)||(47682386-47682457)
chr4 (226-304)||(1940859-1940937)
chr4 (146-212)||(7246650-7246716)
chr4 (142-216)||(8064798-8064872)
chr4 (146-216)||(14858747-14858817)
chr4 (146-212)||(16450341-16450407)
chr4 (146-248)||(48834704-48834806)
chr4 (235-304)||(27248376-27248445)
chr4 (235-304)||(27531751-27531820)
[»] chr6 (27 HSPs)
chr6 (146-304)||(14107362-14107521)
chr6 (142-248)||(13391290-13391396)
chr6 (146-304)||(29333143-29333301)
chr6 (146-305)||(5253227-5253387)
chr6 (146-304)||(8932608-8932767)
chr6 (146-304)||(8944074-8944233)
chr6 (146-304)||(19089445-19089604)
chr6 (146-304)||(21898595-21898754)
chr6 (142-304)||(2271303-2271464)
chr6 (146-304)||(6606101-6606260)
chr6 (146-301)||(13036008-13036164)
chr6 (146-304)||(8938658-8938817)
chr6 (226-304)||(9179821-9179899)
chr6 (146-212)||(9633629-9633695)
chr6 (142-227)||(21872928-21873013)
chr6 (146-221)||(8149801-8149876)
chr6 (237-304)||(22709862-22709929)
chr6 (146-217)||(30788857-30788928)
chr6 (146-212)||(3601124-3601190)
chr6 (143-213)||(33940050-33940120)
chr6 (151-217)||(34954628-34954694)
chr6 (235-304)||(8612068-8612137)
chr6 (235-304)||(10311563-10311632)
chr6 (268-305)||(19230684-19230721)
chr6 (147-216)||(32157172-32157241)
chr6 (176-212)||(9366457-9366493)
chr6 (152-212)||(29444775-29444835)
[»] scaffold0011 (2 HSPs)
scaffold0011 (146-217)||(224351-224422)
scaffold0011 (147-211)||(186557-186621)
[»] scaffold0170 (1 HSPs)
scaffold0170 (151-304)||(9791-9945)
[»] scaffold0029 (1 HSPs)
scaffold0029 (148-306)||(40988-41147)
[»] scaffold0332 (1 HSPs)
scaffold0332 (220-301)||(15280-15361)
[»] scaffold0004 (1 HSPs)
scaffold0004 (142-298)||(94980-95136)
[»] scaffold0209 (1 HSPs)
scaffold0209 (178-304)||(12521-12646)
[»] scaffold0016 (1 HSPs)
scaffold0016 (254-306)||(8823-8875)
[»] scaffold0005 (1 HSPs)
scaffold0005 (142-217)||(219403-219478)
[»] scaffold0116 (1 HSPs)
scaffold0116 (150-228)||(17413-17491)
[»] scaffold0086 (1 HSPs)
scaffold0086 (146-204)||(26230-26288)
[»] scaffold0006 (1 HSPs)
scaffold0006 (226-304)||(68463-68541)
[»] scaffold0010 (2 HSPs)
scaffold0010 (268-304)||(25911-25947)
scaffold0010 (146-210)||(155715-155779)


Alignment Details
Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 19 - 318
Target Start/End: Complemental strand, 42267973 - 42267674
Alignment:
Q  19 attaaggccataggaaactttacacacaactcagttgaaatccaatttcttaaatttgcattatcaacgaggatatagaagatcatactttgatgaatct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  42267973 attaaggccataggaaactttacacacaactcagttgaaatccaatttcttaaatttgcattatcaacgaggatatagaaggtcatactttgatgaacct 42267874  T
Q  119 acatttaaagatctttgaatgtattttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaat 218  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||  ||||||| | |||||||||||||||||  ||||| |||||| ||| |||||      
T  42267873 acatctaaagatctttgaatgtactttgcaccggtttccgatccactaaatatgaacgtctaatccggctcgtatatagagacatgtgtactagtcaagc 42267774  T
Q  219 attttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttgtgttcttctctct 318  Q
    ||| || |||| | |||||||| |||||||||  || |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  42267773 attgttcccctaggagtcgaactcggtatttccagggtacatcattgtaaggagctccttgccagtggagcccaaacaacttggttgtgttcttttctct 42267674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 17642009 - 17642168
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    ||||| |||||||||||| ||||  |||| | |||||||||||||| |||||||||||| ||||||| ||| | || ||  |||||| | |||||||| |    
T  17642009 gcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccag 17642108  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||| ||| ||| ||| ||  ||||||||||||  | |||||||||||||||||||||    
T  17642109 tatttcctgggtacgtccgtggaaggagctccttgtcactggagcccaaacaacttggtt 17642168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 305
Target Start/End: Original strand, 11397894 - 11398053
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    |||||| ||||||||||| ||||  |||| | |||||||| ||| | |||||||||||  ||| ||| ||||  || || |||| | | |||||||||||    
T  11397894 gcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttcccctcggaatcgaacccggt 11397993  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    |||    |||||||||||||  ||||||||||||| | |||||||||| |||||||||||    
T  11397994 attctccggatacatccttggaaggagctccttgccactggagcccaagcaacttggttg 11398053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 26325915 - 26325756
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttcc-ctggaagtcgaacccgg 244  Q
    |||||||||||||||||| |||   |||| | |||||||||||| | |||||||||||| ||||||  ||| | || || || |||| | |||||||||     
T  26325915 gcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaacccga 26325816  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| || |||||| ||||||  ||||||||||||| | |||||||| | ||||||||||    
T  26325815 tattcctcggatacgtccttgaaaggagctccttgccactggagccctagcaacttggtt 26325756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 304
Target Start/End: Complemental strand, 49078185 - 49078058
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||| | |||||||||||| ||||||| ||| | || |||||| ||| | |||||||||||||| |  |||||| |||||   |||||||||    
T  49078185 ctaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttagaaggagctcc 49078086  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||||| ||||||||||    
T  49078085 ttgccactggagcccaagcaacttggtt 49078058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 301
Target Start/End: Complemental strand, 2567377 - 2567223
Alignment:
Q  148 accggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggta 246  Q
    |||||||||||||||| |||| ||||| | |||||| | |||||  ||||||||||| ||||||| |||   || ||||||| | || ||||||||||||    
T  2567377 accggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatcgaacccggta 2567278  T
Q  247 tttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttg 301  Q
    ||    | |||| ||||||  ||||||||||||| |||| |||||||||||||||    
T  2567277 ttctccgaatacgtccttggaaggagctccttgccagtgaagcccaaacaacttg 2567223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 303
Target Start/End: Original strand, 41663861 - 41664019
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccgg 244  Q
    |||||||||||||||||| |||   |||| | ||||||| |||| | |||||||||||| ||||||  ||| | || || ||| ||| | ||||||||||    
T  41663861 gcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccgg 41663960  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggt 303  Q
    |||| |  |||||| |||||   ||||||||||||| | ||||||||||||||||||||    
T  41663961 tattccccggatacgtccttagaaggagctccttgccactggagcccaaacaacttggt 41664019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 8764094 - 8763935
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||||||||||||||| |||   |||| | |||||||||||||| |||||||||||| ||||||| ||| | || ||  |||||| |  ||||||||     
T  8764094 gcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaacccga 8763995  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  || ||| ||||||  ||||||||||||| |  ||||||||| ||||||||||    
T  8763994 tattccccgggtacgtccttggaaggagctccttgccacgggagcccaagcaacttggtt 8763935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 10422891 - 10422732
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccgg 244  Q
    |||||||||||||||  | ||||  |||| | |||||||||||| | |||||||||||| ||||||| ||| | || || | ||| ||| ||||||||||    
T  10422891 gcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaacccgg 10422792  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  | |||| || |||  ||||||||||||| | || ||||||||||||||||||    
T  10422791 tattccccgaatacgtcattggaaggagctccttgccactgtagcccaaacaacttggtt 10422732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 304
Target Start/End: Original strand, 31576548 - 31576711
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaac 240  Q
    ||||||||||||||||||| ||||||| ||||| | |||| ||||||| | ||||||||||   ||| ||| |||  ||| ||| |||||  | ||||||    
T  31576548 ttttgcaccggtttccgacacatcaaagatggacgactaagccggctcatgcgtagaggcacacgcattggccaagcattgtttcccctgagaatcgaac 31576647  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||   |||||| |||||   | ||||||||||| | | |||||||||||||||||||    
T  31576648 ccggtattttcgggatacgtccttagaatgagctccttgccactagagcccaaacaacttggtt 31576711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 5504132 - 5504070
Alignment:
Q  148 accggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcact 210  Q
    |||||||||||||||||||||  |||| | |||||||||||| | ||||||||||||||||||    
T  5504132 accggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcact 5504070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 17389874 - 17389716
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    |||||||||||||||||||||   ||||| | ||||||| |||| | ||| |||||||| |||||||||||| ||| || ||| | || ||||| ||| |    
T  17389874 gcaccggtttccgacccatcagcaatggacgactaatccagctcatgcgtggaggcatgcgcactggtcaaacattgttcccccgaaaatcgaatccgat 17389775  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||  ||| || || |||  ||||||||||||| | ||||| |||| | ||||||||    
T  17389774 atttcccggaaacgtcattgaaaggagctccttgccactggagtccaagctacttggtt 17389716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 2980936 - 2981095
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttcc-ctggaagtcgaacccgg 244  Q
    |||||| |||||||||||  ||| ||||| | |||||||| ||||| ||||||||||||  |||||| ||| | || || || |||| | |||||||| |    
T  2980936 gcaccgatttccgacccactaaacatggacgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaacccag 2981035  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||| ||  ||||||||||||| | | |||||||| ||||||||||    
T  2981036 tattccccggatacgtccctggaaggagctccttgccactagagcccaagcaacttggtt 2981095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 304
Target Start/End: Complemental strand, 5855593 - 5855466
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||| ||| | |||||||||||| ||||||| |||   || || | ||||| | |||||||||||||| |  | |||| ||||||  |||||||||    
T  5855593 ctaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtccttggaaggagctcc 5855494  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||||||||||||||||    
T  5855493 ttgccactggagcccaaacaacttggtt 5855466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 304
Target Start/End: Original strand, 9853278 - 9853440
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaac 240  Q
    |||||||||| |||| |||||| ||||  |||| |  ||||| || ||||  ||||||||||| |||||||| |||  || |||||| | | | ||||||    
T  9853278 ttttgcaccgatttctgacccaccaaaggtggacgattaatctggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaac 9853377  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||   || ||||||||||  ||||||||||||| | |||||||| ||||||||||||    
T  9853378 ccggtattttccgggtacatccttggaaggagctccttgccactggagccc-aacaacttggtt 9853440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 16956569 - 16956498
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaa 217  Q
    |||| ||||||||||||| ||||  ||  || |||||||||||||| |||||||||||| ||||||||||||    
T  16956569 gcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaa 16956498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 304
Target Start/End: Complemental strand, 18915938 - 18915811
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||||| ||||||||||||  |||||| ||| | || || ||| ||| | |||||||||||||| |  || ||| ||||||  || ||||||    
T  18915938 ctaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaagaagctcc 18915839  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | || ||||||||||||||||||    
T  18915838 ttgccactgaagcccaaacaacttggtt 18915811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 33004052 - 33004179
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||||| |||||||||||| ||||||| |||  ||| ||| |||||||| ||||| ||| |||| |  |||||| ||||||  |||||||||    
T  33004052 ctaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatattccccggatacgtccttggaaggagctcc 33004151  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |    | |||||||||| ||||||||||    
T  33004152 tcatcactggagcccaagcaacttggtt 33004179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 48798107 - 48798234
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||| | |||||||||||| ||||| |||||   || ||  |||||||| ||||||||| |||| |  |||||| || |||  |||||||||    
T  48798107 ctaatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagctcc 48798206  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||| ||||||||||||    
T  48798207 ttgccactggagccccaacaacttggtt 48798234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 4581687 - 4581753
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||||| ||||  |||| | ||| |||||||||| |||||||||||| |||||||    
T  4581687 gcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactgg 4581753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 248
Target Start/End: Original strand, 9659184 - 9659286
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    |||||||||||| ||||| ||||  |||| | |||||||||||| | |||| ||||||| ||||| ||||||  || || |||||| | |||||||||||    
T  9659184 gcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgttcccctgggaatcgaacccggt 9659283  T
Q  246 att 248  Q
    |||    
T  9659284 att 9659286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 31152734 - 31152660
Alignment:
Q  230 ggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |||||||||||||| | ||| ||||||||||  | ||||||||||| | | |||||||||||||||||||    
T  31152734 ggaaatcgaacccggtattccctgggtacatccttggaaagagctccttgccactagagcccaaacaacttggtt 31152660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 41743286 - 41743217
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||||||| || |||||| ||||||  ||||||||||||| |  ||||||||| ||||||||||    
T  41743286 tcgaacccggtattcctcggatacgtccttggaaggagctccttgccaccggagcccaagcaacttggtt 41743217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 50503400 - 50503525
Alignment:
Q  180 aatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcctt 278  Q
    |||||||||||| |||||||||||| ||||||||||| | || ||  |||||| | ||||||||| |||| |  |||||| ||||||  ||||||||||     
T  50503400 aatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacccgatattccccggatacgtccttgaaaggagctcctc 50503499  T
Q  279 gctagtggagcccaaacaacttggtt 304  Q
    || | | ||| ||| |||||||||||    
T  50503500 gccactagagtccatacaacttggtt 50503525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 304
Target Start/End: Original strand, 30927728 - 30927892
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttcc-ctggaagtcgaac 240  Q
    ||||||||||||||| |||||| ||||  |||| | |||||||||||| | ||||||||||||  || ||| |||   || || || |||||| ||||||    
T  30927728 ttttgcaccggtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaac 30927827  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggag-cccaaacaacttggtt 304  Q
    ||| ||||||   | ||| ||||||  ||||||||||||| | ||||| || |||||||||||||    
T  30927828 ccgatatttcccaggtacgtccttggaaggagctccttgccactggagtccaaaacaacttggtt 30927892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 26660240 - 26660138
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccgg 244  Q
    |||||||||||||||||| ||||  |||  | |||||||||||| | |||||||||||| | |||| |||||| || || ||| ||||| ||||||||||    
T  26660240 gcaccggtttccgacccaccaaaggtggc-gactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaacccgg 26660142  T
Q  245 tatt 248  Q
    ||||    
T  26660141 tatt 26660138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 10336623 - 10336549
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaa 216  Q
    ||||||| |||||| ||| ||||||||  |||| |  ||||||||||| | |||||||||||| |||||||||||    
T  10336623 ttttgcatcggttttcgatccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaa 10336549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 18649390 - 18649427
Alignment:
Q  179 taatccggctcgtacgtagaggcatgtgcactggtcaa 216  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  18649390 taatctggctcgtacgtagaggcatgcgcactggtcaa 18649427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 304
Target Start/End: Original strand, 33418243 - 33418279
Alignment:
Q  268 aggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||||||||||||| | |||||||||||||||||||||    
T  33418243 aggagctccttgccactggagcccaaacaacttggtt 33418279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 6e-28; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 45877556 - 45877397
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccgg 244  Q
    ||||||||||||||||||||||   || | | |||||||||||| | |||||||||||||||||||| ||| | || |||||| ||||| ||||||||||    
T  45877556 gcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccgg 45877457  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||||||  ||| ||||||||| | |||||||||||||||||||||    
T  45877456 tattccccggatacgtccttggaaggggctccttgccactggagcccaaacaacttggtt 45877397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 15320288 - 15320129
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccgg 244  Q
    ||||||||||| |||||| ||||  |||  | |||||||||||||| ||||||||||||  |||||| |||  ||| || | ||| ||| ||||||||||    
T  15320288 gcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaacccgg 15320189  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  || ||| ||||||  ||||||||||||| | ||||| |||||||||||||||    
T  15320188 tattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggtt 15320129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 29128017 - 29127862
Alignment:
Q  150 cggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttt-tccctggaagtcgaacccggtatt 248  Q
    |||||||||||||| ||||  |||  | |||||||||||| | |||||||||||| ||||||  ||| | || || ||||||||| ||||||||| ||||    
T  29128017 cggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaacccgatatt 29127918  T
Q  249 tcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
     |   ||||| ||||||  |||| |||||||| | |||||||||||||||||||||    
T  29127917 ccccagatacgtccttggaaggatctccttgccactggagcccaaacaacttggtt 29127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 25295062 - 25294903
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctgga-agtcgaacccgg 244  Q
    |||||||||||| ||||| |||   |||| | |||||||||||| | | |||||||||| ||||||| ||| | || ||||||  || | || |||||||    
T  25295062 gcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaacccgg 25294963  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  25294962 tattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 25294903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 26207806 - 26207965
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccgg 244  Q
    ||||||||||||||||||  ||  ||||  | |||||||||||| | ||||||||||||  |||||| |||   || || ||| ||| | ||||||||||    
T  26207806 gcaccggtttccgacccactaataatggccgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaacccgg 26207905  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  || ||||||||||  ||||||||||||| | |||||||||| ||||||||||    
T  26207906 tattccccgggtacatccttggaaggagctccttgccactggagcccaagcaacttggtt 26207965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 305
Target Start/End: Complemental strand, 7650329 - 7650169
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||||||||| ||||| ||||  |||  | |||||||||||||| ||||||| |||  | ||||| ||| | || ||  |||||||| ||||||||||    
T  7650329 gcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaacccgg 7650230  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    |||| | |   ||||||||||  |||| |||||||| | |||| |||||||||||||||||    
T  7650229 tattccctaagtacatccttgaaaggaactccttgccactggaacccaaacaacttggttg 7650169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 47219246 - 47219182
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcact 210  Q
    |||||||||||||||||||||||  |||| | |||||||||||| | |||||||||||| |||||    
T  47219246 gcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcact 47219182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 32873586 - 32873712
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||| ||||| ||||||||||||||||||||||||||   || || ||||| | | ||||||| |||| |||  || ||| ||||||  | |||||||    
T  32873586 ctaatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggta-ttcccgggtacgtccttggaatgagctcc 32873684  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||||||||||||||||    
T  32873685 ttgccactggagcccaaacaacttggtt 32873712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 305
Target Start/End: Original strand, 47749142 - 47749269
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcct 277  Q
    ||||| |||||||| |||||||||||| ||||||| |||   || || |||| | | |||||||||||||| | ||||||| ||||||  || ||||| |    
T  47749142 ctaattcggctcgtgcgtagaggcatgcgcactggccaagagttgttcccctaggaatcgaacccggtattccctggatacgtccttggaagaagctcat 47749241  T
Q  278 tgctagtggagcccaaacaacttggttg 305  Q
    | | | |||||||||||||| |||||||    
T  47749242 taccactggagcccaaacaatttggttg 47749269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 54261328 - 54261169
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccgg 244  Q
    ||||||||||||||||||  |||  || | | |||||||||||| | |||||||||||| ||||||| |||   || || | ||| | | ||||||||||    
T  54261328 gcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccgg 54261229  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |   | ||| ||||||  ||||||||||||| | |||||||||||||||||||||    
T  54261228 tattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 54261169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 55069680 - 55069755
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaa 217  Q
    |||||||||||||||||||||| ||||  ||   |  ||||||||||||| |||||||||||||||||||| ||||    
T  55069680 ttttgcaccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaa 55069755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 300
Target Start/End: Original strand, 3136699 - 3136853
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    |||||||||||||||| | ||||  |||| | |||||||| ||| | |||||||||||| ||||||  ||| | || || ||||| || ||||| |||||    
T  3136699 gcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttcccctgaaaatcgaatccggt 3136798  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaactt 300  Q
    ||| |  || ||| ||||||  ||||||| ||||| |  ||||||||||||||||    
T  3136799 attccccgggtacgtccttgaaaggagcttcttgccacgggagcccaaacaactt 3136853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 304
Target Start/End: Complemental strand, 10855405 - 10855327
Alignment:
Q  226 ccctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||| || |||||||||||||     ||||||||||  ||||||||||||| | |||||||||||||||||||||    
T  10855405 ccctggaaatcaaacccggtatttcccaagtacatccttggaaggagctccttgccactggagcccaaacaacttggtt 10855327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 304
Target Start/End: Complemental strand, 13893947 - 13893869
Alignment:
Q  226 ccctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||| || ||||||||||| |  ||| || ||||||  ||||||||||||| | |||||||||||||||||||||    
T  13893947 ccctggaaatccaacccggtattccccggacacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 13893869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 47471929 - 47471775
Alignment:
Q  150 cggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggtattt 249  Q
    |||||||||||||| ||||  |||| | ||||| |||||| | |||||| ||||| ||||| | |||  ||| || |||||| | ||||||||||||||     
T  47471929 cggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcattgttcccctgggaatcgaacccggtattc 47471830  T
Q  250 cttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    | | | ||| ||||||  |||||||| |||| | | |||||||| ||||||||||    
T  47471829 cctaggtacgtccttggaaggagctctttgccactagagcccaagcaacttggtt 47471775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 50405604 - 50405678
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaa 216  Q
    |||||||||||||||||||||| |||   |||  | |||||||| ||||| |||||||||||| |||||||||||    
T  50405604 ttttgcaccggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaa 50405678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 304
Target Start/End: Complemental strand, 29136013 - 29135856
Alignment:
Q  148 accggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggta 246  Q
    |||||||||| ||||| |||   |||| | |||||||||||| | |||||||||||| ||||||| ||| | || ||  |||||| | ||||| ||||||    
T  29136013 accggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggta 29135914  T
Q  247 tttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    || |  |||||| ||||||  || |||||||||| | |||||||||| ||| ||||||    
T  29135913 ttccccggatacgtccttggaagaagctccttgccactggagcccaagcaatttggtt 29135856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 30767258 - 30767407
Alignment:
Q  152 gtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtatttc 250  Q
    |||||||||||| ||||  |||  | |||||||||||||| ||||||||||||  |||||| ||| | || ||  |||||||| ||||||||| |||| |    
T  30767258 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgatattcc 30767357  T
Q  251 ttggatacatccttgttaggagctccttgctagtggagcccaaacaactt 300  Q
       | ||||||||||  |||| |||||||| | |||||||||| ||||||    
T  30767358 ccaggtacatccttggaaggaactccttgccactggagcccaagcaactt 30767407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 304
Target Start/End: Complemental strand, 33251758 - 33251605
Alignment:
Q  152 gtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttcc-ctggaagtcgaacccggtatttc 250  Q
    |||| ||||||||||||| |||| | |||||||||||| | ||||||||||||  |||||| ||||  || || || | || | |||||||||||||| |    
T  33251758 gttttcgacccatcaaatgtggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtattcc 33251659  T
Q  251 ttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
        |||| ||||||  |||||||| |||| |  ||||||||||||||||||||    
T  33251658 cctaatacgtccttggaaggagctcattgccaccggagcccaaacaacttggtt 33251605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 42412869 - 42412938
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||||||| |  |||||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  42412869 tcgaacccggtattccccggatacgtccttggaaggagctccttgccattggagcccaagcaacttggtt 42412938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 928702 - 928543
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||| ||| |||| || ||||  |||||| |||||||||||||| ||||| |||||| ||||||||||| | || ||  |||||  | ||||| | ||    
T  928702 gcaccgattttcgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaagtgttgttccccctgagaatcgaatctgg 928603  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| | | | ||| ||||||  | ||||||||||| ||| ||||| |||||||||||||    
T  928602 tattccctaggtacgtccttggaatgagctccttgccagttgagcctaaacaacttggtt 928543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 22405644 - 22405703
Alignment:
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaactt 300  Q
    ||||||||||  |||||| || ||| |||||||||||||| | |||||||||||||||||    
T  22405644 ccggtatttcacggatacgtcattggtaggagctccttgccactggagcccaaacaactt 22405703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 23511669 - 23511598
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaa 217  Q
    |||||||||| ||||||||||||  |||| |  ||||||| ||| | |||||||||||| ||||||||||||    
T  23511669 gcaccggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaa 23511598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 29762160 - 29762319
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctgga-agtcgaacccgg 244  Q
    |||||||||||||||||| |||   |||| | ||||||| |||| | | |||||||||| ||||||| ||| | || || |||  || | ||| |||||     
T  29762160 gcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcggacccga 29762259  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  | |||||||||||  ||||||||||||| | |||||||||| ||||||||||    
T  29762260 tattccccgaatacatccttggaaggagctccttgccactggagcccaagcaacttggtt 29762319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 3507538 - 3507604
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||||| ||||  ||   | |||||||||||||| |||||||||||| |||||||    
T  3507538 gcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactgg 3507604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 19873478 - 19873420
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagagg 200  Q
    ||||||||| ||||||||||||  ||| ||||| | |||||||||||||| ||||||||    
T  19873478 ttttgcaccagtttccgacccacaaaagatggacgactaatccggctcgtgcgtagagg 19873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 28572216 - 28572274
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatg 204  Q
    |||||||||||||||||| ||||  |||  | |||||||||||||| ||||||||||||    
T  28572216 gcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatg 28572274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 35923625 - 35923699
Alignment:
Q  143 tttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaa 217  Q
    ||||||||||||| ||| |||||||| ||||| | ||||| || ||||| | |||||||||| ||||||| ||||    
T  35923625 tttgcaccggttttcgatccatcaaagatggacgactaattcgactcgtgcttagaggcatgcgcactggccaaa 35923699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 43330769 - 43330807
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaa 216  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  43330769 ctaatccggctcgtgcgtagaggcatgcgcactggtcaa 43330807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 46529965 - 46530035
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    |||||||||||||| |   | ||| ||||||  ||||||||||||| | ||||||||||||||||||||||    
T  46529965 tcgaacccggtattccccaggtacgtccttgaaaggagctccttgccactggagcccaaacaacttggttg 46530035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 49021208 - 49021274
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||||| |||   |||| | |||||||||||| | |||||||||||| |||||||    
T  49021208 gcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 50753342 - 50753404
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatg 204  Q
    |||||||||||||||||||||| |||  ||| | | |||||||| ||||| ||||||||||||    
T  50753342 ttttgcaccggtttccgacccaccaatgatgaacgactaatccgactcgtgcgtagaggcatg 50753404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 26361973 - 26362030
Alignment:
Q  147 caccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatg 204  Q
    ||||||||||||||||||||||  ||   | |||||||||||||| ||||||||||||    
T  26361973 caccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatg 26362030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 304
Target Start/End: Complemental strand, 48341999 - 48341963
Alignment:
Q  268 aggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||||||||||||| | |||||||||||||||||||||    
T  48341999 aggagctccttgccactggagcccaaacaacttggtt 48341963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 9e-24; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 142 - 301
Target Start/End: Complemental strand, 1797569 - 1797409
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaac 240  Q
    |||||||||||||| ||| |||||||| ||||| | ||| |||||||||| ||||||| |||| ||||||| |||   || |||||| ||| | ||||||    
T  1797569 ttttgcaccggttttcgatccatcaaagatggacgactagtccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaac 1797470  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttg 301  Q
    |||||||| || |||||| ||||||  ||||||||||||| | |||||||||| |||||||    
T  1797469 ccggtattcctcggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 1797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 48804788 - 48804629
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccct-ggaagtcgaacccgg 244  Q
    |||||||||||||||||| |||   |||| | |||||||||||| | |||||||||||| ||||||| ||| | || || |||| || | ||||||||||    
T  48804788 gcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaacccgg 48804689  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  48804688 tattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 48804629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 4228790 - 4228914
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcct 277  Q
    |||||||||||| | ||||| |||||||||||||| ||||  || ||  ||||||| ||||||| |||||| || |||||| ||||||  ||||||||||    
T  4228790 ctaatccggctcatgcgtaggggcatgtgcactggccaaacgttgtt--cctggaaatcgaacctggtattcctcggatacgtccttggaaggagctcct 4228887  T
Q  278 tgctagtggagcccaaacaacttggtt 304  Q
    |||   |||||||||||||||||||||    
T  4228888 tgccgctggagcccaaacaacttggtt 4228914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 302
Target Start/End: Complemental strand, 34659299 - 34659174
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctgga-agtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||||| |||||||||||| |||||||||||   || || |||| || | |||||||||||||| |  || ||||||| ||  |||||||||    
T  34659299 ctaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaacccggtattccccgggtacatccctggaaggagctcc 34659200  T
Q  277 ttgctagtggagcccaaacaacttgg 302  Q
    |||| | |||||||||||||||||||    
T  34659199 ttgccactggagcccaaacaacttgg 34659174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 305
Target Start/End: Original strand, 4195238 - 4195366
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||| | |||||||||||| ||||| | ||||| || || | ||||||| |||||| ||||||| |  |||||| ||||||  |||||||||    
T  4195238 ctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaactcggtattccccggatacgtccttggcaggagctcc 4195337  T
Q  277 ttgctagtggagcccaaacaacttggttg 305  Q
    |||| | |||||||||| |||||||||||    
T  4195338 ttgccactggagcccaagcaacttggttg 4195366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 305
Target Start/End: Complemental strand, 3353529 - 3353370
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    ||||||||||| || ||||||||  |||| | |||||||||||||| |||||||||||| ||||||| ||||| || ||||||||  | |||| |||| |    
T  3353529 gcaccggtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtttccctgagaatcgatcccgat 3353430  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    ||| | | ||||| ||||| | | ||||||||||| | || || |||| ||| |||||||    
T  3353429 attccctagatacgtccttataatgagctccttgccactgcaggccaagcaatttggttg 3353370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 304
Target Start/End: Original strand, 17748390 - 17748545
Alignment:
Q  150 cggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtatt 248  Q
    |||||||||||||| ||||  |||| | ||||||||||||||||||||||||||| ||||||| |||   || ||  |||||| | ||||||||||||||    
T  17748390 cggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 17748489  T
Q  249 tcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
     |  | |||| ||||||  || |||| ||||| | | |||||||||||||||||||    
T  17748490 ccccgaatacgtccttggaagaagctgcttgccactagagcccaaacaacttggtt 17748545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 26423323 - 26423450
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||| ||||||| |||||||||| ||||||||| |||   || |||||| ||| | |||||||||||||| ||||| ||| ||||||  ||||| | |    
T  26423323 ctaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaacccggtattccttgggtacgtccttggaaggagtttc 26423422  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||||||||||||||||    
T  26423423 ttgccactggagcccaaacaacttggtt 26423450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 305
Target Start/End: Original strand, 43346783 - 43346943
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctgga-agtcgaacccgg 244  Q
    |||| ||||||||||||| |||| |||   | ||||||||||||||||||||||||||| |||| || ||| | || || |||| || | | ||||||||    
T  43346783 gcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaacccgg 43346882  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    |||| |   ||||| || |||  ||||||||||||| | ||||| ||||||||||||||||    
T  43346883 tattccccagatacgtctttggaaggagctccttgccactggagtccaaacaacttggttg 43346943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 304
Target Start/End: Complemental strand, 13095967 - 13095804
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaac 240  Q
    |||||||||||||||||||||| ||||  ||   | |||||||||||| | |||||||||||| ||||||| ||| | || || ||| ||| | | ||||    
T  13095967 ttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaac 13095868  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||| |  || ||| ||||||  ||||||||||||| |  ||||||||| ||||||||||    
T  13095867 ccggtattccccgggtacgtccttgaaaggagctccttgccacgggagcccaagcaacttggtt 13095804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 301
Target Start/End: Original strand, 24969330 - 24969484
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    |||||||||||||| |||||||| |||   |  ||||||| || ||||||||||||| | ||||||| ||| | || || |||||||| |||||||||||    
T  24969330 gcaccggtttccgagccatcaaagatgagcgattaatccgacttgtacgtagaggcacgcgcactggccaagtgttgtt-ccctggaaatcgaacccggt 24969428  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttg 301  Q
    ||||    ||||| ||||||  |  |||||||||| | ||||||||||||||||||    
T  24969429 attttccagatacgtccttgaaaaaagctccttgccactggagcccaaacaacttg 24969484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 304
Target Start/End: Original strand, 42210270 - 42210425
Alignment:
Q  150 cggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtatt 248  Q
    |||||||||||||| |||   ||| ||  ||||||||||||| |||||||||||| ||||||| ||||  || ||||| |||| | ||||| ||||||||    
T  42210270 cggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaagccggtatt 42210369  T
Q  249 tcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
     || |||||| ||||||  | ||||||||||| | ||||| | || ||||||||||    
T  42210370 cctcggatacgtccttggaaagagctccttgccactggagtctaagcaacttggtt 42210425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 22573917 - 22573759
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    |||||||||| | |||||||||  ||||| |  ||||||||||| | |||| ||||||| ||||||||||||| || || ||||| || ||||||||| |    
T  22573917 gcaccggttttcaacccatcaatgatggacgattaatccggctcatgcgtaaaggcatgcgcactggtcaaatgttgttcccctgaaaatcgaacccgat 22573818  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||| |    ||| ||| |||  || |||| ||||||| |||||||||| ||||||||||    
T  22573817 attcccccaatatatctttggaagaagcttcttgctactggagcccaagcaacttggtt 22573759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 4973146 - 4973273
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    ||||||||||||||||||||||||||| ||| ||||||| | || || ||| | | | ||||||||| |||| |  | |||  ||||||  || ||||||    
T  4973146 ctaatccggctcgtacgtagaggcatgcgcattggtcaagtgttattccccgtaggaatcgaacccgatattccccgaataagtccttggaagaagctcc 4973245  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||  |||||||||||||||||||||||    
T  4973246 ttgtcagtggagcccaaacaacttggtt 4973273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 23658288 - 23658130
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaac 240  Q
    |||||||| |||||| |||||| |||| ||||| | ||||||||||||||  |||||||||||  |||||| |||   || ||  |||||||| ||||||    
T  23658288 ttttgcacaggtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaac 23658189  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaactt 300  Q
      | |||| | ||| ||| ||||||  ||||||||||||| | |||||||||||||||||    
T  23658188 tggatattccctgggtacgtccttg-aaggagctccttgccactggagcccaaacaactt 23658130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 42032197 - 42032046
Alignment:
Q  150 cggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatt 248  Q
    |||||||||||||||||||  ||||   ||||| |||||| | |||||| | ||||||||||| ||||  || || ||| ||| | ||||||| ||||||    
T  42032197 cggtttccgacccatcaaaggtggacaactaattcggctcatgcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcgaaccaggtatt 42032098  T
Q  249 tcttggatacatccttgttaggagctccttgctagtggagcccaaacaactt 300  Q
     |  || ||| ||||||  ||||||| ||||||| |||||||||||||||||    
T  42032097 ccccgggtacgtccttggaaggagcttcttgctactggagcccaaacaactt 42032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 48551962 - 48551904
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatg 204  Q
    |||||||||||||| ||||||||  |||| | |||||||||||| ||||||||||||||    
T  48551962 gcaccggtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatg 48551904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 305
Target Start/End: Complemental strand, 43925585 - 43925457
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    ||||||| |||| | |||||||||||| ||||||  ||| | || || ||| ||| | |||||||||||||| |  || ||| ||||||  |||||||||    
T  43925585 ctaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctcc 43925486  T
Q  277 ttgctagtggagcccaaacaacttggttg 305  Q
    |||| | |||||||||| |||||||||||    
T  43925485 ttgccactggagcccaagcaacttggttg 43925457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 10047880 - 10048039
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccgg 244  Q
    |||||||||||||||||| |||   |||| | ||||| | |||| | ||||||||| || ||||||| ||| | || || ||| ||| | ||||||||||    
T  10047880 gcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaacccgg 10047979  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||||||  ||||||||||||| | |||||  ||| ||||||||||    
T  10047980 tattccccggatacgtccttggaaggagctccttgccactggagttcaagcaacttggtt 10048039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 304
Target Start/End: Complemental strand, 14650390 - 14650263
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||| ||||||| | ||||||||||| ||||||||||||  ||| || | ||||||| ||||||||| ||||    || ||| ||||||  |||||||||    
T  14650390 ctaacccggctcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaacccgatattctccgggtacgtccttggaaggagctcc 14650291  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | | ||| |||||||||||||||    
T  14650290 ttgccactagagtccaaacaacttggtt 14650263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 43861976 - 43862135
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||||||| ||| ||| ||||  || ||| |||||||||||| | |||||||||||| ||||||| ||||  || ||  |||||| | ||||||||||    
T  43861976 gcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccgg 43862075  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |   ||||| || |||  | |||||||||||   | |||||||||||||||||||    
T  43862076 tattccccagatacgtctttggaaagagctccttgccgctagagcccaaacaacttggtt 43862135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 45447995 - 45447916
Alignment:
Q  225 tccctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||||||||| ||||||| ||||||||| || ||| ||||||  ||||||||||||| | | || ||||| ||||||||||    
T  45447995 tccctggaaatcgaacctggtatttctcgggtacgtccttggaaggagctccttgccactagaacccaagcaacttggtt 45447916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 5069901 - 5069975
Alignment:
Q  227 cctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttg 301  Q
    ||||||| ||||||||||||||||  || ||| |||||   || |||||||||| | ||||||||||||||||||    
T  5069901 cctggaaatcgaacccggtatttcccgggtacgtccttagaagaagctccttgccactggagcccaaacaacttg 5069975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 38578871 - 38578937
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||||| ||||  |||  | |||||||||||| | |||||||||||| |||||||    
T  38578871 gcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgg 38578937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 39420946 - 39420876
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    ||||||||||||||||| |||||||||  | || | |||||||||||| | |||||||||| | |||||||    
T  39420946 ttttgcaccggtttccggcccatcaaaggtagacgactaatccggctcatgcgtagaggcacgcgcactgg 39420876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 41945578 - 41945512
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||| |||||||| || ||||  |||| | |||||||||||||| |||||||||||| |||||||    
T  41945578 gcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactgg 41945512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 44961642 - 44961712
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaa 216  Q
    |||||||||||||||||||||||   ||||  |||||| | ||||||||||||| |||| | |||||||||    
T  44961642 gcaccggtttccgacccatcaaaggcggataactaatctgactcgtacgtagagacatgcgtactggtcaa 44961712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 49142705 - 49142739
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||| ||||||||||||||||||||    
T  49142705 ctaatccggctcgtgcgtagaggcatgtgcactgg 49142739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 19914796 - 19914865
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||| ||||| ||| | ||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  19914796 tcgaacccagtattccttaggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 19914865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 47341947 - 47341822
Alignment:
Q  180 aatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatttcttggatacatccttgttaggagctcctt 278  Q
    ||||| |||||| |||||||||||| ||||||| ||| | || || ||| ||| | |||||| ||||||| |  || ||| ||||||  | |||||||||    
T  47341947 aatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagctcctt 47341848  T
Q  279 gctagtggagcccaaacaacttggtt 304  Q
    || | |||||||||| ||||||||||    
T  47341847 gccactggagcccaagcaacttggtt 47341822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 304
Target Start/End: Original strand, 5039545 - 5039581
Alignment:
Q  268 aggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||||||||||||| | |||||||||||||||||||||    
T  5039545 aggagctccttgccactggagcccaaacaacttggtt 5039581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 301
Target Start/End: Complemental strand, 21286550 - 21286390
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaac 240  Q
    |||||||||||||||| ||||| |||  |||  || ||||||| |||||| |||||||||||| |||||||||||   || |||| ||||| | ||||||    
T  21286550 ttttgcaccggtttccaacccaccaatgatgagtgactaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaac 21286451  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttg 301  Q
    |||||||| |  |||||| ||||||  ||||||||||||| | |||||| |||||||||||    
T  21286450 ccggtattccccggatacgtccttggaaggagctccttgccactggagctcaaacaacttg 21286390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 21180350 - 21180477
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||||| |||||||||||||||||||| ||| | || || ||| ||| | ||||| ||||||||  | || ||| ||||||  |||||||||    
T  21180350 ctaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggagctcc 21180449  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||||||||||||||||    
T  21180450 ttgccactggagcccaaacaacttggtt 21180477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 7787162 - 7787003
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaac 240  Q
    |||||||||||||| ||| ||| |||| ||||  | |||||||||||||| |||||||||||| | ||||| ||| |||| ||  |||||||| ||||||    
T  7787162 ttttgcaccggttttcgatccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaac 7787063  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaactt 300  Q
    |||||||| |  || ||| |||| |  ||||| ||||||| | |||||||||| ||||||    
T  7787062 ccggtattccccgggtacgtcctagaaaggagttccttgccactggagcccaaccaactt 7787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 29422317 - 29422158
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttcc-ctggaagtcgaacccgg 244  Q
    |||||| ||||||| ||||||||  |||| | |||||||||||||| |||| ||| |||  || ||| ||| | || || || |||||| |||||||| |    
T  29422317 gcaccgatttccgatccatcaaaggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatcgaacccag 29422218  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  || ||| ||||||  ||||||||||||||| |||||||||||||||||||||    
T  29422217 tattccccgggtacgtccttgaaaggagctccttgctactggagcccaaacaacttggtt 29422158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 280
Target Start/End: Complemental strand, 2785034 - 2784900
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    ||||||||||||||| ||||||  ||||| | |||||| | ||| | |||||||||||| ||||||  ||||| || |||||||| || |||||| ||||    
T  2785034 gcaccggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactgaccaaatcttgtttccctgaaaatcgaactcggt 2784935  T
Q  246 atttcttggatacatccttgttaggagctccttgc 280  Q
    ||| || |||||| ||||||  |||||||| ||||    
T  2784934 attcctcggatacgtccttgaaaggagctcattgc 2784900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 294
Target Start/End: Complemental strand, 25549834 - 25549681
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaac 240  Q
    |||||||||| ||| ||| |||||||| ||||| | |||||||||||||| |||||||||||||||||| | ||||| || ||||||||   | ||||||    
T  25549834 ttttgcaccgatttacgatccatcaaagatggacgactaatccggctcgtgcgtagaggcatgtgcactagccaaatgttgttttccctaagaatcgaac 25549735  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaa 294  Q
    || ||||| |    |||| | ||||  ||||||||||||| | |||||||||||    
T  25549734 ccagtattccccaaatacgtacttggaaggagctccttgccactggagcccaaa 25549681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 305
Target Start/End: Original strand, 41031910 - 41032069
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||| ||||||||||||| ||||  ||| || |||||||||||||| ||||||||||||  |||||| ||| | || ||  |||||| | ||||||||||    
T  41031910 gcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccgg 41032009  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    | || | ||| ||| ||||||  ||||||||||||| | |||||||||| ||| |||||||    
T  41032010 tgttccctgg-tacgtccttggaaggagctccttgccactggagcccaagcaatttggttg 41032069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 7747376 - 7747217
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccgg 244  Q
    ||||||||||||||||||  |||  || | | |||||||||||| | ||||||||||||  |||||| ||||  || || | ||| | | ||||||||||    
T  7747376 gcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaacccgg 7747277  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  7747276 tattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 7747217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 8410233 - 8410074
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||||||||||||||  ||||  |||  | |||||||||||||| |||||||||||| ||||||| ||| | || ||  |||||| | |||||||||     
T  8410233 gcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccga 8410134  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||||    || ||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  8410133 tattctccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 8410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 301
Target Start/End: Complemental strand, 37560274 - 37560119
Alignment:
Q  147 caccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctgga-agtcgaacccggt 245  Q
    ||||||||| ||||||||||||  |||| |  ||||||||||||| |||||||||||| ||||||  ||||  || || |||| || | ||||||| |||    
T  37560274 caccggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaacctggt 37560175  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttg 301  Q
    ||| || || ||| ||||||  ||||||| ||| | | ||||||||||||||||||    
T  37560174 attcctcgggtacgtccttggaaggagcttcttaccactggagcccaaacaacttg 37560119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 304
Target Start/End: Original strand, 42770651 - 42770814
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctgga-agtcgaac 240  Q
    ||||||| |||||| ||||||| ||||  |||| |  ||||||||||||| || ||||||||| ||||||| |||   || || |||  || | | ||||    
T  42770651 ttttgcatcggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaac 42770750  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||||||||||| |||||| ||||||  |||||||| |||| | |||||||||| ||||||||||    
T  42770751 ccggtatttctcggatacgtccttggaaggagctctttgccactggagcccaagcaacttggtt 42770814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 24179674 - 24179518
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacc 241  Q
    ||||||||||||||   ||||| |||| ||||| | |||||||||||| | |||||||||||||||||||| ||||  || || |||||  | ||||| |    
T  24179674 ttttgcaccggtttttaacccaccaaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgttgttcccctgagaatcgaa-c 24179576  T
Q  242 cggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaactt 300  Q
    ||||| ||| ||| ||| ||||||  |||||||| |||| | | |||||||||||||||    
T  24179575 cggta-ttcatgggtacgtccttggaaggagctctttgccactagagcccaaacaactt 24179518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 25540408 - 25540474
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||||| ||||  |||| | |||||||||||||| |||||||||||| |||||||    
T  25540408 gcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactgg 25540474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 304
Target Start/End: Original strand, 10046487 - 10046639
Alignment:
Q  152 gtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctgga-agtcgaacccggtatttc 250  Q
    |||||||||||| ||||  |||  | |||||||||||| | |||||||||||| |||||| |||||  || ||||||| || | ||||||||||||||      
T  10046487 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactg-tcaaacgttgtttcccttgagaatcgaacccggtattct 10046585  T
Q  251 ttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
      |||||| | ||||  ||||||||||||| | |||||||||| ||||||||||    
T  10046586 ccggatacgttcttggaaggagctccttgccattggagcccaagcaacttggtt 10046639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 28525460 - 28525525
Alignment:
Q  147 caccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||| ||||||||||||| |||  |||||| |||||||||||||| |||||||||||| |||||||    
T  28525460 caccagtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactgg 28525525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 304
Target Start/End: Complemental strand, 2550938 - 2550811
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||| | ||||||| |||| |||||||  || | || || | ||||| | ||||||||| |||| |  |||||| ||||||| |||||||||    
T  2550938 ctaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccggatacgtccttgtaaggagctcc 2550839  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||||| ||||||||||    
T  2550838 ttgccactggagcccaagcaacttggtt 2550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 20116616 - 20116674
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatg 204  Q
    |||||||||||||||||||||||  |||| | |||||||||||| | ||||||||||||    
T  20116616 gcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatg 20116674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 305
Target Start/End: Complemental strand, 12864326 - 12864166
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||||||||||||||| |||   |||| | |||||| ||||| | || ||||||||| ||||||  ||| | || ||  |||||||| ||||| ||||    
T  12864326 gcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaatccgg 12864227  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    |||| |  | |||| || |||  ||||||||||||  | ||||||||||||||||||||||    
T  12864226 tattccccgaatacgtcattggaaggagctccttgtcactggagcccaaacaacttggttg 12864166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 297
Target Start/End: Original strand, 39806889 - 39807041
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccgg 244  Q
    ||||||||||  || ||| ||||  |||||| |||||||| |||||  ||||||||||| ||||||| ||||  || |||| | ||| | ||||||||||    
T  39806889 gcaccggtttatgaaccaccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaacccgg 39806988  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaa 297  Q
    |||| |  || ||| ||||||| ||||||  ||||| | ||||||||||||||    
T  39806989 tattccccgggtacgtccttgtaaggagcatcttgccactggagcccaaacaa 39807041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 14853479 - 14853530
Alignment:
Q  253 ggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||||||  ||||| ||||||| | |||||||||||||||||||||    
T  14853479 ggatacatccttgaaaggagttccttgccactggagcccaaacaacttggtt 14853530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 18649062 - 18649189
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||| ||| | |||||||||||| ||||||  |||||||| || | ||||  | ||||| |||||||| | || || ||||||||  || |||| |    
T  18649062 ctaatccgactcatgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaatcgaatccggtattccctgaatgcatccttggaagcagcttc 18649161  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||||||||||||||||    
T  18649162 ttgccactggagcccaaacaacttggtt 18649189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 304
Target Start/End: Complemental strand, 38005472 - 38005345
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccct-ggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||| |  ||||||||||| ||||||| |||   || || |||| || | |||||||| ||||| |  || ||| ||||||  |||||||||    
T  38005472 ctaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccagtattccccgggtacgtccttggaaggagctcc 38005373  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||||||||||||||||    
T  38005372 ttgccactggagcccaaacaacttggtt 38005345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 304
Target Start/End: Complemental strand, 5035385 - 5035231
Alignment:
Q  151 ggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtattt 249  Q
    |||||||||||||| |||  ||||||  |||||||| |||| ||||||| |||| |||||||||||  ||| ||||  |||| | ||||||||  |||||    
T  5035385 ggtttccgacccattaaaggtggatgattaatccggttcgtgcgtagagacatgcgcactggtcaagcattgttttttctgggaatcgaacccaatattt 5035286  T
Q  250 cttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
       |||||| | |||   || |||||| ||| | |||||||||||||||||||||    
T  5035285 tccggatacgttcttagaagcagctccgtgccactggagcccaaacaacttggtt 5035231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 304
Target Start/End: Original strand, 6358156 - 6358314
Alignment:
Q  147 caccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggt 245  Q
    ||||||||| ||||||| |||   |||| | |||||||||||| | |||||||||||| ||||||| ||| | || ||  |||||||| ||||| | |||    
T  6358156 caccggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggt 6358255  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||| |  |||||| |||||   | ||||| ||||| | |||||||||||||||| ||||    
T  6358256 attccccggatacgtcctttgaatgagcttcttgccactggagcccaaacaactcggtt 6358314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 10823162 - 10823096
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    ||||||||||||||||||  |||  |||  | |||||||||||||| |||||||||||| |||||||    
T  10823162 gcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactgg 10823096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 20612538 - 20612699
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatcc-ggctcgtacgtagaggcatgtgcactggtcaaatattttttcc--ctggaagtcgaaccc 242  Q
    |||||||||||||||||| |||   |||| | ||||||| ||||| | | |||||||||| ||||||| ||| | || || ||  |||  | ||||||||    
T  20612538 gcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcgaaccc 20612637  T
Q  243 ggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||| |  | ||||| |||||  ||||||||||||| | |||||||||| ||||||||||    
T  20612638 ggtattccccgaatacaaccttggaaggagctccttgccactggagcccaagcaacttggtt 20612699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 34356275 - 34356149
Alignment:
Q  179 taatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcct 277  Q
    ||||||||||| | | |||||||||| ||||||  ||| | || ||  |||||||| |||||||||||||| |   ||||| ||||||  |  |||||||    
T  34356275 taatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattccccagatacgtccttggaaatagctcct 34356176  T
Q  278 tgctagtggagcccaaacaacttggtt 304  Q
    ||| | |||||||||||||||||||||    
T  34356175 tgccactggagcccaaacaacttggtt 34356149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 34722782 - 34722717
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactg 211  Q
    ||||||||||| || ||||||||  |||  | |||||||||||||| ||||||| |||||||||||    
T  34722782 gcaccggtttctgatccatcaaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactg 34722717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 8e-21; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 146 - 305
Target Start/End: Complemental strand, 45521274 - 45521115
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    |||||||||||||||||||||||  ||   | |||||||||||| | |||||||||||| |||||| |||| | || || |||||| | |||||||||||    
T  45521274 gcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttcccctgggaatcgaacccggt 45521175  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    ||| |  || ||||||||||  | || |||||||| | |||||||||| |||||||||||    
T  45521174 attccccgggtacatccttggaatgaactccttgccactggagcccaagcaacttggttg 45521115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 18374120 - 18373961
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaac 240  Q
    |||||||||||||| ||||||| ||||  |||| | |||||||||||| | |||||||||||| |||||||||||   || || ||||||  | ||||||    
T  18374120 ttttgcaccggttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaac 18374021  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaactt 300  Q
    | ||||||||  ||||| ||| |||  | ||||||||||| | |||||||||||||||||    
T  18374020 ctggtatttcccggatatatctttggaatgagctccttgccattggagcccaaacaactt 18373961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 15884560 - 15884718
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    |||||||||||||||||| ||||  |||  | |||||||||||||| |||||||||||| ||||| | ||| | || || |||||| | |||||||||||    
T  15884560 gcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttcccctgggaatcgaacccggt 15884659  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||| |   | ||| ||||||  ||||||||||| | | |||||||||| ||||||||||    
T  15884660 attccccaggtacgtccttggaaggagctccttaccactggagcccaatcaacttggtt 15884718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 2467122 - 2467281
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaa-atattttttccctggaagtcgaacccgg 244  Q
    ||||||||||||||| || ||| | |||| | |||||||||||| | | ||||| |||| ||||||| ||| |  | ||  |||||||| ||||||||||    
T  2467122 gcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaacccgg 2467221  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  2467222 tattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 2467281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 8141204 - 8141049
Alignment:
Q  150 cggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatt 248  Q
    ||||||| |||||| ||||| |||| | ||||| | |||| | |||||||||||| ||||||| |||   || |||||| ||||| ||||||||||||||    
T  8141204 cggtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtatt 8141105  T
Q  249 tcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
     |  | |||| ||||||  || |||||||||| | |||||||||||||||||||||    
T  8141104 ccccgaatacgtccttggaagcagctccttgccactggagcccaaacaacttggtt 8141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 14666075 - 14666234
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccgg 244  Q
    |||||||||| ||||||| ||| | |||  | |||||| |||| || |||||||||||| ||||||| ||| | || |||||| ||| | ||||||||||    
T  14666075 gcaccggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccgg 14666174  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||||||  | ||||||||||| | |||||||||| ||||||||||    
T  14666175 tattccccggatacgtccttggaatgagctccttgccactggagcccaagcaacttggtt 14666234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 142 - 304
Target Start/End: Original strand, 44893278 - 44893441
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaac 240  Q
    ||||||||||||||||||||||||||   ||   |  ||||||||||||| ||||||||||||  |||||| |||  ||| || ||| | ||| | ||||    
T  44893278 ttttgcaccggtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaac 44893377  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||| |  || ||| ||||||  ||||||||||||| | |||||||||||||||||||||    
T  44893378 ccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 44893441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 304
Target Start/End: Complemental strand, 29933846 - 29933720
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||| ||||||||||||||| |||||||||| | || || ||||||| | |||||||| |||||    |||||||| |||   |||||||||    
T  29933846 ctaatccggctcatacgtagaggcatgtacactggtcaagtgttgttctccctgggaatcgaaccc-gtattctccggatacattcttagaaggagctcc 29933748  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | ||||| |||||||||||||||    
T  29933747 ttgccactggagtccaaacaacttggtt 29933720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 33935771 - 33935898
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttt-tccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||| ||| | |||| ||||||| ||||||| ||| | || || ||||| | | ||||| |||||||| ||||| |||||||||   |||||||||    
T  33935771 ctaatccgactcatgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtattccttgggtacatccttaaaaggagctcc 33935870  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||||||||||||||||    
T  33935871 ttgcaactggagcccaaacaacttggtt 33935898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 304
Target Start/End: Complemental strand, 6100546 - 6100419
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||| | ||||| |||||| ||||||| |||   || || | ||||| | |||||||||||||| |  |||||| ||||||  |||||||||    
T  6100546 ctaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttgaaaggagctcc 6100447  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | || ||||||||||||||||||    
T  6100446 ttgccactgaagcccaaacaacttggtt 6100419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 17981515 - 17981392
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    ||||| || ||||| ||||||||||||  ||||||||||   || || ||| ||| | ||||||||||||||||  || ||||||||||  |||||||||    
T  17981515 ctaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaacccggtatttcccgggtacatccttggaaggagctcc 17981416  T
Q  277 ttgctagtggagcccaaacaactt 300  Q
    |||| | |||||||||| ||||||    
T  17981415 ttgccactggagcccaagcaactt 17981392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 304
Target Start/End: Complemental strand, 583886 - 583761
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcct 277  Q
    |||||||| ||| | |||||||||||| |||||||||||   || || ||  |||| ||||||||||||||||| |  ||| ||||||  || |||||||    
T  583886 ctaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttccctaggaa-tcgaacccggtatttctcgagtacgtccttggaagtagctcct 583788  T
Q  278 tgctagtggagcccaaacaacttggtt 304  Q
    ||| | | |||||||||||||||||||    
T  583787 tgccactagagcccaaacaacttggtt 583761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 14846681 - 14846523
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    |||||| ||||||||||| ||||  |||| | || ||| | ||| | |||||||||||| ||||||  |||  ||| || |||||  | |||||||||||    
T  14846681 gcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaatcattgttcccctgagaatcgaacccggt 14846582  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||| |  || ||| |||||   ||||||| ||||| |||||||||||||||||||||||    
T  14846581 attccccgggtacgtccttagaaggagcttcttgccagtggagcccaaacaacttggtt 14846523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 43027407 - 43027353
Alignment:
Q  150 cggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatg 204  Q
    ||||||||||||||||||| ||||| | |||||||||||| | ||||||||||||    
T  43027407 cggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatg 43027353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 33401835 - 33401958
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||| ||| | ||||||||||||  |||||||||| | || || ||| || || |||||||||||||| |  |  ||| ||||||  |||||||||    
T  33401835 ctaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattccccgagtacgtccttgaaaggagctcc 33401934  T
Q  277 ttgctagtggagcccaaacaactt 300  Q
    |||| | |||||||||||||||||    
T  33401935 ttgccactggagcccaaacaactt 33401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 265
Target Start/End: Complemental strand, 36662506 - 36662391
Alignment:
Q  150 cggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggtattt 249  Q
    |||||||||| |||| |||  |||| | ||||||||| || |||||||||||||| |||||||  || |||| || ||||| || ||||||||| ||||     
T  36662506 cggtttccgatccattaaaagtggacgactaatccggttcatacgtagaggcatgcgcactggctaagtattgttcccctgaaaatcgaacccgatattc 36662407  T
Q  250 cttggatacatccttg 265  Q
    || | |||| ||||||    
T  36662406 ctcgtatacgtccttg 36662391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 38922508 - 38922579
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttgt 306  Q
    |||||||||||||| |  || ||| ||||||  ||||||||||||| | |||||||||| ||||||||||||    
T  38922508 tcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggttgt 38922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 4479300 - 4479366
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||||| ||||  |||| | ||||||| |||| | |||||||||||| |||||||    
T  4479300 gcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactgg 4479366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 30903393 - 30903283
Alignment:
Q  194 gtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaa 293  Q
    |||| |||||| |||||||||||  ||| |||||||| || ||||| |||||||| |  | |||| || |||  || |||||||| ||| |||||| |||    
T  30903393 gtagcggcatgcgcactggtcaagcattgtttccctgaaaatcgaatccggtattccccgaatacgtcattggaagaagctccttactactggagcgcaa 30903294  T
Q  294 acaacttggtt 304  Q
    |||||||||||    
T  30903293 acaacttggtt 30903283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 3568005 - 3567940
Alignment:
Q  151 ggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaa 216  Q
    ||||||||||||| ||||  |||||| |||||  ||||| | |||||||| |||||||||||||||    
T  3568005 ggtttccgacccaccaaaggtggatgactaatttggctcatgcgtagaggtatgtgcactggtcaa 3567940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 6940582 - 6940505
Alignment:
Q  227 cctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||||||| ||||||||| |||||   |||||| ||||||  | ||||||||| | | |||||||||||||||||||||    
T  6940582 cctggaaatcgaacccgatattttccggatacctccttggaatgagctccttaccactggagcccaaacaacttggtt 6940505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 10535506 - 10535567
Alignment:
Q  244 gtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    ||||| || |||||| ||||||  ||||||||||||| | ||||| ||||||||||||||||    
T  10535506 gtattcctcggatacgtccttggaaggagctccttgccactggagtccaaacaacttggttg 10535567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 13085540 - 13085471
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||||||| |  |||||| ||||||  |||||||||| || | |||||||||||||| ||||||    
T  13085540 tcgaacccggtattccccggatacgtccttggaaggagctcctcgccactggagcccaaacaagttggtt 13085471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 305
Target Start/End: Complemental strand, 17845728 - 17845679
Alignment:
Q  256 tacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    ||||||||||  |||||||| |||| | ||||||||||||||||||||||    
T  17845728 tacatccttggaaggagctcattgccactggagcccaaacaacttggttg 17845679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 304
Target Start/End: Original strand, 24938568 - 24938725
Alignment:
Q  148 accggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccggta 246  Q
    |||||||||||| ||||||||  |||||| ||||||||| || | |||||||||||| ||| ||  ||| | || ||||  || ||| ||||||| ||||    
T  24938568 accggtttccgatccatcaaaggtggatgactaatccggttcatgcgtagaggcatgcgcattgaccaagtgttgtttcatctagaaatcgaacctggta 24938667  T
Q  247 tttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||    || ||  ||||||   |||||||||||| | |||||||||||||||||||||    
T  24938668 ttctccgggtatgtccttggagggagctccttgccactggagcccaaacaacttggtt 24938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 42086430 - 42086271
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||||||||||||||| ||||  |||| | |||||||||||| | |||||||||||| |||||||||||   || ||  |||||| | ||||||||||    
T  42086430 gcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacccgg 42086331  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| || || ||| ||||||  ||||||||||||| |  ||||||||| ||||||||||    
T  42086330 tattcctcgggtacgtccttggaaggagctccttgccaccggagcccaagcaacttggtt 42086271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 8513622 - 8513463
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||||||||||||||| ||||  |||| | |||||| ||||||| |||||||||||||||||||| |||  ||| ||| |||| | | ||||||||||    
T  8513622 gcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaacccgg 8513523  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  || ||| ||||||  ||||||||||||| | | ||| |||| ||||||||||    
T  8513522 tattccccgggtacgtccttggaaggagctccttgccacttgagtccaagcaacttggtt 8513463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 41163464 - 41163622
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    ||||| ||||||||||||  |||  |||| | ||||||| |||| | ||||||| |||||||||||| ||||  || || |||||| | |||||||||||    
T  41163464 gcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgttcccctgggaatcgaacccggt 41163563  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||| |  || ||| | ||||  ||||||||||||| | |||||||||||||||||||||    
T  41163564 attccccgggtacgttcttggaaggagctccttgccactggagcccaaacaacttggtt 41163622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 1538534 - 1538375
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccgg 244  Q
    |||||||||||||||||| |||   |||| |  ||||||||||| | |||||||||||| ||||||| ||| | || || ||| ||| | ||||||||||    
T  1538534 gcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgg 1538435  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  | |||| |||| |  ||||||||||||| | |||||||||||||||||||||    
T  1538434 tattccccgaatacgtcctcggaaggagctccttgccactggagcccaaacaacttggtt 1538375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 20525941 - 20525782
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccgg 244  Q
    |||||||||||||| ||| |||   |||| | |||||||||||| | |||||||||||| |||||||  || | || || | ||||| | |||||||||     
T  20525941 gcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacccga 20525842  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||||||||||  ||||||||||||| | |||||||||| ||||||||||    
T  20525841 tattccccggatacatccttgaaaggagctccttgccactggagcccaagcaacttggtt 20525782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 42291509 - 42291575
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||| ||||||||  |||| | |||||||||||||| ||||||||||||||||||||    
T  42291509 gcaccggtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactgg 42291575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 21375454 - 21375350
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    |||| ||||||||| |||||||| ||||| | |||||||| ||| | |||||| ||||| ||||||||||||| || || || ||| ||||||||||| |    
T  21375454 gcactggtttccgatccatcaaagatggacgactaatccgactcatgcgtagaagcatgcgcactggtcaaatgttgttcccttgggagtcgaacccgat 21375355  T
Q  246 atttc 250  Q
    |||||    
T  21375354 atttc 21375350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 5731924 - 5732083
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccgg 244  Q
    ||||||||||||||||||  |||  || | | |||||| ||||| |||||||||||||| ||||||| |||   || || | ||||| | ||||||||||    
T  5731924 gcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccgg 5732023  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  || ||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  5732024 tattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 5732083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 304
Target Start/End: Complemental strand, 19572795 - 19572668
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||| | |||||||||||| ||||||| ||| | || || ||| ||| | || ||||||||||| |  |||||| ||||||  |||||||||    
T  19572795 ctaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaacccggtattccccggatacgtccttggaaggagctcc 19572696  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||||| ||||||||||    
T  19572695 ttgccactggagcccaagcaacttggtt 19572668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 305
Target Start/End: Complemental strand, 24499052 - 24498926
Alignment:
Q  179 taatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcctt 278  Q
    |||||||||||||||||||||||||| |||||| ||||   || ||| | | ||| ||||||||| ||||     ||||| ||||||  |||||||||||    
T  24499052 taatccggctcgtacgtagaggcatgcgcactgatcaagcgttattttcttagaaatcgaacccgatattctccagatacgtccttggaaggagctcctt 24498953  T
Q  279 gctagtggagcccaaacaacttggttg 305  Q
    |||| | |||||||||||||| |||||    
T  24498952 gctactagagcccaaacaactcggttg 24498926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 39099779 - 39099849
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||||||||| ||||  |||  | |||||||||||| | ||||||||||||||||||||    
T  39099779 ttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactgg 39099849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 42861222 - 42861381
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccct-ggaagtcgaacccgg 244  Q
    |||||||| ||||||||| |||   |||| |  ||||||||||| | |||||||||||| ||||||| ||| | || ||||||| |||| | |||||||     
T  42861222 gcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttccctgggaaattgaacccga 42861321  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||  ||||||  | ||||||||||| | |||||||||||||| ||||||    
T  42861322 tattccccggatatgtccttggaatgagctccttgccactggagcccaaacaatttggtt 42861381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 3653914 - 3653988
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaa 216  Q
    |||||||||||||| ||| ||| ||||  |||| | |||||||| ||||| |||||||||||| |||||||||||    
T  3653914 ttttgcaccggttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaa 3653988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 280
Target Start/End: Original strand, 11845806 - 11845940
Alignment:
Q  147 caccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggt 245  Q
    ||||||||||| ||||||||||  |||  |  |||| |||||| |||||||||||||| ||||||| ||||  || ||  |||| ||| ||||||||| |    
T  11845806 caccggtttccaacccatcaaaggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaacccgat 11845905  T
Q  246 atttcttggatacatccttgttaggagctccttgc 280  Q
    |||||| || ||| ||||||  |||||||||||||    
T  11845906 atttctcgggtacgtccttggaaggagctccttgc 11845940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 38897755 - 38897825
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggtatt 248  Q
    |||||||||||||| |||||||||||| ||||||| |||   || || |||||||| ||||||||||||||    
T  38897755 ctaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccctggaaatcgaacccggtatt 38897825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 43399231 - 43399165
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||| | ||||| |||| | ||||||| |||||| |||||||||||| |||||||    
T  43399231 gcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactgg 43399165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 41801079 - 41801010
Alignment:
Q  147 caccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaa 216  Q
    ||||| |||||||||||||||| ||| | | |||||||||||||| ||||||| |||| ||| |||||||    
T  41801079 caccgctttccgacccatcaaagatgaacgactaatccggctcgtgcgtagagacatgcgcattggtcaa 41801010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 23383642 - 23383590
Alignment:
Q  254 gatacatccttgttaggagctccttgctagtggagcccaaacaacttggttgt 306  Q
    ||||| ||||||  ||||||||||||| | |||||||||||||||||||||||    
T  23383642 gatacgtccttggaaggagctccttgccactggagcccaaacaacttggttgt 23383590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 24875441 - 24875377
Alignment:
Q  153 tttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaa 217  Q
    ||||||||||||||||  |||| |  ||||||||||||| ||||||| |||| ||||||||||||    
T  24875441 tttccgacccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcactggtcaaa 24875377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 304
Target Start/End: Complemental strand, 37263349 - 37263185
Alignment:
Q  140 tattttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaa 239  Q
    ||||| |||||||||||||| |||  |||  |||| | |||||||||||||| |||||||||||| ||| ||| |||   || || |||||  | |||||    
T  37263349 tatttcgcaccggtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttcccctgagaatcgaa 37263250  T
Q  240 cccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |||| |  || ||| |||||   |||| |||||||| | |||||||||| ||||||||||    
T  37263249 cccgatattccccgggtacgtccttagaaggaactccttgccactggagcccaagcaacttggtt 37263185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 30349682 - 30349523
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccgg 244  Q
    ||||||||||||| |||| | ||  |||| | ||||| | |||| | | |||||||||| ||||||| |||  ||| || ||| | ||| || |||||||    
T  30349682 gcaccggtttccggcccacctaaggtggacgactaattcagctcatgcatagaggcatgcgcactggccaatcattgttccccctagaaatcaaacccgg 30349583  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||||||  |||| |||||||| | |||||||||||||||||||||    
T  30349582 tattccccggatacgtccttggaaggaactccttgccactggagcccaaacaacttggtt 30349523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 9805107 - 9805041
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    ||||| |||||||||||| ||||  |||| | |||||||||||| | |||||||||||| |||||||    
T  9805107 gcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 9805041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 304
Target Start/End: Original strand, 18136365 - 18136443
Alignment:
Q  226 ccctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||| | ||||||||||||||    |||||| || |||  ||||||||||||| | |||||||||||||||||||||    
T  18136365 ccctgggaatcgaacccggtattctccggatacgtctttggaaggagctccttgccactggagcccaaacaacttggtt 18136443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 27648433 - 27648487
Alignment:
Q  150 cggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatg 204  Q
    |||||||||| ||| |||| ||||| | |||||||||||| ||||||||||||||    
T  27648433 cggtttccgatccaccaaagatggacgactaatccggctcatacgtagaggcatg 27648487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 304
Target Start/End: Complemental strand, 28857194 - 28857072
Alignment:
Q  183 ccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgct 281  Q
    ||||||| | |||||||||||| ||||||| ||| | || || ||| ||| | |||||||||||||| |  || | | ||||||  |||||||||||||     
T  28857194 ccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgcc 28857095  T
Q  282 agtggagcccaaacaacttggtt 304  Q
    | |||||||||| ||||||||||    
T  28857094 actggagcccaagcaacttggtt 28857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 6767145 - 6767214
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||||||| |  || ||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  6767145 tcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 6767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 7866594 - 7866525
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||||||| || || ||| ||||||  ||||||||||||| | ||||| |||| ||||||||||    
T  7866594 tcgaacccggtattcctcgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggtt 7866525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 9812885 - 9812816
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||||||| |  || ||| ||||||  ||||||||||||| | ||||| |||||||||||||||    
T  9812885 tcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggtt 9812816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 12705027 - 12704958
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||||||| |  || ||| ||||||  ||||||||||||| | ||||| |||||||||||||||    
T  12705027 tcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggtt 12704958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 25452996 - 25452923
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggtatttct 251  Q
    |||||||||||||| ||||||||||||  ||||||||||| ||| || ||||| || |  ||| ||||||||||    
T  25452996 ctaatccggctcgtgcgtagaggcatgcacactggtcaaacattgttcccctgaaaattaaactcggtatttct 25452923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 27484263 - 27484206
Alignment:
Q  147 caccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatg 204  Q
    ||||||||||| ||| |||||| ||||| ||||||||||| || | ||||||||||||    
T  27484263 caccggtttccaacctatcaaagatggacgtctaatccggttcatgcgtagaggcatg 27484206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 35403606 - 35403675
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||||||||||||||||  |  ||| ||||||  ||||||||||||| | |||||||||||||| ||||||    
T  35403606 tcgaacccggtatttcccgagtacgtccttggaaggagctccttgccactggagcccaaacaagttggtt 35403675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 6764457 - 6764525
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcact 210  Q
    |||| |||| |||||||||||| |||| || |  | |||||||||||||| |||||||||||| |||||    
T  6764457 tttttcaccagtttccgacccaacaaagataggcgactaatccggctcgtgcgtagaggcatgcgcact 6764525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 14974360 - 14974400
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaat 218  Q
    |||||||||||| | |||||||||||||||||||| |||||    
T  14974360 ctaatccggctcatgcgtagaggcatgtgcactggccaaat 14974400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 18327789 - 18327717
Alignment:
Q  229 tggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttg 301  Q
    ||||| |||||||| ||||||| || |||| ||||||  ||||||||||||| | ||||| ||||| ||||||    
T  18327789 tggaaatcgaacccagtatttcctgaatacgtccttggaaggagctccttgccactggagtccaaaaaacttg 18327717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 146 - 305
Target Start/End: Complemental strand, 33647828 - 33647668
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttt-tccctggaagtcgaacccgg 244  Q
    |||||||||||||| ||| |||| ||| | | |||||| || |||| |||||||| |||||||||||||||   || || ||||||||| ||||||||||    
T  33647828 gcaccggtttccgatccaccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaacccgg 33647729  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    |||| |   ||||| ||||||  ||||||||||||| | | |||||||| |||||||||||    
T  33647728 tattccccagatacgtccttgaaaggagctccttgccactagagcccaagcaacttggttg 33647668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 24166557 - 24166398
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccgg 244  Q
    |||||||||||||| ||||||||  ||| || |||||| ||||||| |||||||||||| ||||||| ||||  || |||||| ||| | |||||||| |    
T  24166557 gcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacccag 24166458  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |  ||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  24166457 tattccccgagtacgtccttggaaggagctccttgccactggagcccaatcaacttggtt 24166398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 29895894 - 29895735
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccgg 244  Q
    |||||||||||||| ||| |||   |||| | |||||||||||| | |||||||||||| ||||||| ||| | || || ||| ||| | ||||||||||    
T  29895894 gcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgg 29895795  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  29895794 tattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 29895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 38166134 - 38165975
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccgg 244  Q
    |||||||||||||||||| ||||  |||  | |||||||||||||| ||||||| |||| ||||||| |||   || || ||| ||| | || ||||| |    
T  38166134 gcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaacccag 38166035  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||||||  ||||||||||||| |||||||||||||||||||||||    
T  38166034 tattccccggatacgtccttggaaggagctccttgccagtggagcccaaacaacttggtt 38165975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 304
Target Start/End: Complemental strand, 1446901 - 1446774
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||| | |||||||||||| ||||||| ||| | || || ||| ||| | |||||||||||||| |  |||||| ||||||  |||||||||    
T  1446901 ctaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctcc 1446802  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||||| ||||||||||    
T  1446801 ttgccactggagcccaagcaacttggtt 1446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 53599134 - 53599008
Alignment:
Q  179 taatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccggtatttcttggatacatccttgttaggagctcct 277  Q
    ||||||||||| | |||||||||||| ||||||| ||||  || || | ||||| | |||||||||||||| |  || ||| ||||||  ||||||||||    
T  53599134 taatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctcct 53599035  T
Q  278 tgctagtggagcccaaacaacttggtt 304  Q
    ||| | |||||||||||||||||||||    
T  53599034 tgccaatggagcccaaacaacttggtt 53599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 306
Target Start/End: Complemental strand, 47078533 - 47078404
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||||||||| |||||||||||||||||||| |||   || ||  |||||| | |||||||||||||| |  || ||| ||||||  |||||||||    
T  47078533 ctaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctcc 47078434  T
Q  277 ttgctagtggagcccaaacaacttggttgt 306  Q
    |||| | |||| ||||| ||||||||||||    
T  47078433 ttgccactggaacccaagcaacttggttgt 47078404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 2559414 - 2559255
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccgg 244  Q
    |||||||||||||||||| ||||  |||| |  |||||||||| || |||||||||||| ||||||| |||   || || | ||| ||| ||||| ||||    
T  2559414 gcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaatccgg 2559315  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |   | ||| ||||||  |||||||| |||| | |||||||||||||||||||||    
T  2559314 tattccccaggtacgtccttggaaggagctcgttgccactggagcccaaacaacttggtt 2559255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 3574482 - 3574609
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttt-tccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcc 276  Q
    |||||||| ||||| |||||||||||| ||||||| ||| | || || ||||||| | | |||| ||||||| | | | ||| ||||||  |||||||||    
T  3574482 ctaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttggaaggagctcc 3574581  T
Q  277 ttgctagtggagcccaaacaacttggtt 304  Q
    |||| | |||||||||| ||||||||||    
T  3574582 ttgccactggagcccaagcaacttggtt 3574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 304
Target Start/End: Complemental strand, 8889133 - 8888970
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaac 240  Q
    |||| ||||||||||||||||| ||||  |||| | |||||||||||| | ||||||| |||| ||||||  ||| | || ||  |||| | | ||||||    
T  8889133 ttttacaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaac 8889034  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||| |  |||||| |||||   |||||||||||||   | |||||||||||||||||||    
T  8889033 ccggtattccccggatacgtccttagaaggagctccttgccgctagagcccaaacaacttggtt 8888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 14859398 - 14859327
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaa 217  Q
    ||||| ||||||||| |||||||  |||||| |||||| ||||||| ||||||| |||| ||||||||||||    
T  14859398 gcaccagtttccgacacatcaaaggtggatgactaatctggctcgtgcgtagagacatgcgcactggtcaaa 14859327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 6032647 - 6032717
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaa 216  Q
    |||||||||||||||||| ||||  | || | |||||||||||| | |||||||||||| |||||||||||    
T  6032647 gcaccggtttccgacccaccaaaggtagacgactaatccggctcattcgtagaggcatgagcactggtcaa 6032717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 43458716 - 43458654
Alignment:
Q  150 cggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    ||||||||||| |||||||  |||| | |||||||||||||| |||||||||||| |||||||    
T  43458716 cggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactgg 43458654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 49260665 - 49260735
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||| ||||||||||| ||||  |||  | |||||||||||||| |||||||||||| |||||||    
T  49260665 ttttgcaccgatttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactgg 49260735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 40780865 - 40780930
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactg 211  Q
    |||||||||||||||||| ||||  |||| | |||||||||||| | |||||||||||| ||||||    
T  40780865 gcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactg 40780930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 46108802 - 46108713
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctgg 231  Q
    ||||||| |||||||||||||||||||  |||| | |||||| ||||| | |||||||||||| ||||| | ||||| || || ||||||    
T  46108802 ttttgcatcggtttccgacccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcactagccaaatgttgttcccctgg 46108713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 4736612 - 4736544
Alignment:
Q  237 gaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    |||||||||||| || || ||||||||||  |||||||| |||| | |||||| |||||||||||||||    
T  4736612 gaacccggtattcctcgggtacatccttgaaaggagctcattgccactggagctcaaacaacttggttg 4736544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 304
Target Start/End: Original strand, 26480076 - 26480112
Alignment:
Q  268 aggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26480076 aggagctccttgccagtggagcccaaacaacttggtt 26480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 41162969 - 41163045
Alignment:
Q  228 ctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||| |||||| |||||||||  |||||| ||||||  ||||||||||||  | |||||||||| ||||||||||    
T  41162969 ctggaaatcgaactcggtatttcccggatacgtccttggaaggagctccttgtcactggagcccaagcaacttggtt 41163045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 14597900 - 14597975
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaa 217  Q
    |||||||||||||| ||| ||||||||  |||| | ||||||| | |||| |||||||||||| ||||||| ||||    
T  14597900 ttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaaa 14597975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 34667696 - 34667767
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttgt 306  Q
    |||||||||||||| |  || ||| ||||||  ||||||||||||| | | |||||||||||||||||||||    
T  34667696 tcgaacccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggttgt 34667767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 47682386 - 47682457
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaa 217  Q
    |||||||||||||||||| ||||  |||  | |||| ||||||||| ||||||| |||||||||||| ||||    
T  47682386 gcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactggccaaa 47682457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 304
Target Start/End: Original strand, 1940859 - 1940937
Alignment:
Q  226 ccctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||| | ||||||||| ||||||  || ||| ||||||  ||||||||||||| | | |||||||||||||||||||    
T  1940859 ccctgggaatcgaacccgatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 1940937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 7246650 - 7246716
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||||| ||||  |||  | |||||||||||| | |||||||||||| |||||||    
T  7246650 gcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgg 7246716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 8064798 - 8064872
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaa 216  Q
    |||||||||||||| ||||| || ||   |||| | |||||||||||| | |||||||||||| |||||||||||    
T  8064798 ttttgcaccggttttcgacctattaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaa 8064872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 14858817 - 14858747
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaa 216  Q
    ||||||||||| |||||||||||  |||| |  ||||| | ||||||||||||| |||| |||||||||||    
T  14858817 gcaccggtttctgacccatcaaaggtggacgaataatctgactcgtacgtagagacatgcgcactggtcaa 14858747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 16450407 - 16450341
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||| | ||||  |||| | |||||| ||||| | ||||||||||||||||||||    
T  16450407 gcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactgg 16450341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 248
Target Start/End: Original strand, 48834704 - 48834806
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    |||||||||||||||||| ||||  | |  | |||||||| ||| |   |||||||||||||||||| | | |||| || |||||||| |||||||||||    
T  48834704 gcaccggtttccgacccaccaaaggtaggcgactaatccgactcatgtatagaggcatgtgcactggcctagtattattcccctggaaatcgaacccggt 48834803  T
Q  246 att 248  Q
    |||    
T  48834804 att 48834806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 27248445 - 27248376
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||||||| |  |||||| ||||||  |||||||| |||| | |||||||||| ||||||||||    
T  27248445 tcgaacccggtattccccggatacgtccttggaaggagctcgttgccactggagcccaagcaacttggtt 27248376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 27531751 - 27531820
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||||||| | ||| ||| ||||||  ||||||||||||| | ||||| |||| ||||||||||    
T  27531751 tcgaacccggtattccctgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggtt 27531820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 14107362 - 14107521
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccgg 244  Q
    ||||||||||||||||||  ||  ||||  | |||||||||||| | ||||||||||||||||||||||||   || || | ||||| | ||||||||||    
T  14107362 gcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaacccgg 14107461  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  | |||| || |||  ||||||||||||| | |||||||||||||||||||||    
T  14107462 tattccccgaatacgtctttggaaggagctccttgccactggagcccaaacaacttggtt 14107521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 248
Target Start/End: Complemental strand, 13391396 - 13391290
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacc 241  Q
    |||||||||||||| |||||||| ||||||||  | |||||||||||||| |||||||||||| ||||||| |||| ||| || ||||| || ||||| |    
T  13391396 ttttgcaccggttttcgacccattaaatatgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacattgttcccctgaaaatcgaatc 13391297  T
Q  242 cggtatt 248  Q
    || ||||    
T  13391296 cgatatt 13391290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 29333143 - 29333301
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggt 245  Q
    ||||||||| |||||| | ||||  |||| | || || |||||| | |||||||||||| ||||||| ||||  || || |||||||| |||||||||||    
T  29333143 gcaccggttaccgacctaccaaaggtggacgactgattcggctcatgcgtagaggcatgcgcactggccaaacgttgttcccctggaaatcgaacccggt 29333242  T
Q  246 atttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||| | ||| ||| ||||||  |||||||| |||| | | |||||||||||||||||||    
T  29333243 attccctgggtacgtccttggaaggagctcattgccactagagcccaaacaacttggtt 29333301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 305
Target Start/End: Original strand, 5253227 - 5253387
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc-tggaagtcgaacccgg 244  Q
    |||||||||||||||||| ||||  |||  |  ||||||||||| | |||||||||||| ||||||| ||| | || || ||| ||| | ||||||||||    
T  5253227 gcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgg 5253326  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttg 305  Q
    |||| |  || ||| ||||||  ||||||||||||| | |||||||||| |||||||||||    
T  5253327 tattccccgggtacgtccttggaaggagctccttgccattggagcccaagcaacttggttg 5253387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 8932767 - 8932608
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||||||||||||||||||||  ||| ||  ||||||||||| | |||||||||||| ||||| | ||| | || ||  |||||| | |||||||||     
T  8932767 gcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccga 8932668  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||||||||||  |||| |||||||| | |||||  ||||||||||||||    
T  8932667 tattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttggtt 8932608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 8944233 - 8944074
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||||||||||||||||||||  ||| ||  ||||||||||| | |||||||||||| ||||| | ||| | || ||  |||||| | |||||||||     
T  8944233 gcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccga 8944134  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||||||||||  |||| |||||||| | |||||  ||||||||||||||    
T  8944133 tattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttggtt 8944074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 19089604 - 19089445
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||||||||||||||| ||||  | || | |||||||||||||| ||||||||||||  |||||| ||| | || ||  |||||| | || |||| ||    
T  19089604 gcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaacctgg 19089505  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| || |||||| ||||||  | ||||||||||| | |||||||||| ||||||||||    
T  19089504 tattcctcggatacgtccttgaaatgagctccttgcgactggagcccaagcaacttggtt 19089445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 21898754 - 21898595
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccgg 244  Q
    ||||||||||||||||||  |||  || | | |||||||||||| | |||||||||||| ||||||| |||   || || | ||||| | ||||||||||    
T  21898754 gcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccgg 21898655  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  21898654 tattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 21898595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 304
Target Start/End: Original strand, 2271303 - 2271464
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacc 241  Q
    |||||||| |||||| |||||||||||  |||| | |||||||||||||| ||||||| |||| ||||||| | ||   || ||| |||  | |||||||    
T  2271303 ttttgcactggtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactgg-ctaagcgttgttctctgagaatcgaacc 2271401  T
Q  242 cggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||||||| |  | |||| ||||||  ||||||||||||| | |||||||||| ||||||||||    
T  2271402 cggtattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 2271464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 304
Target Start/End: Original strand, 6606101 - 6606260
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||||||||||||||| |||   |||| | |||||||||||| | ||||||||||||| |||||| ||| | || ||  |||||  | ||||||||||    
T  6606101 gcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaacccgg 6606200  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||| ||||||  ||||||||||||| | ||  |||||| ||||||||||    
T  6606201 tattccccggatacgtccttggaaggagctccttgccactgtggcccaagcaacttggtt 6606260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 301
Target Start/End: Original strand, 13036008 - 13036164
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccgg 244  Q
    |||||||||||||||||| |||   |||| | |||||| ||||| | |||||||||||| ||||||| ||| | || ||  ||||| || |||||||||     
T  13036008 gcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccga 13036107  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttg 301  Q
    |||| |  | |||| ||||||  ||||||||||||| | |||||||||| |||||||    
T  13036108 tattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 8938817 - 8938658
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttc-cctggaagtcgaacccgg 244  Q
    |||||||||||||||||||||||  |||| | ||||| |||||| | |||||| || || ||||||||||| | || || | ||||| | |||||||  |    
T  8938817 gcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcgaaccaag 8938718  T
Q  245 tatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||| |  |||||  || |||  ||||||||||||  | |||||||||||||||||||||    
T  8938717 tattccccggatatgtctttggaaggagctccttgtcactggagcccaaacaacttggtt 8938658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 304
Target Start/End: Original strand, 9179821 - 9179899
Alignment:
Q  226 ccctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||| | |||||||||||||| | ||| ||| ||||||  | ||||||||||| | |||||||||||||||||||||    
T  9179821 ccctgggaatcgaacccggtattccctgggtacgtccttggaatgagctccttgccactggagcccaaacaacttggtt 9179899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 9633629 - 9633695
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||||| ||||  |||  | |||||||||||||| |||||||||||| |||||||    
T  9633629 gcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactgg 9633695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 21873013 - 21872928
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttcc 227  Q
    |||||||| ||||||||||||||||||  |||| | |||||||  |||||||||| | ||||||||| ||| ||||| || |||||    
T  21873013 ttttgcactggtttccgacccatcaaaggtggacgactaatccaactcgtacgtaaaagcatgtgcattggccaaatgttgtttcc 21872928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 8149801 - 8149876
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt 221  Q
    |||||||||||| ||||| ||||  |||| | ||||| |||||  | |||||||||||||||| ||||||||||||    
T  8149801 gcaccggtttccaacccaccaaaggtggacgactaattcggctaatgcgtagaggcatgtgcattggtcaaatatt 8149876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 304
Target Start/End: Complemental strand, 22709929 - 22709862
Alignment:
Q  237 gaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||| ||||||||| | |||||||||   ||||||| ||||||| || ||||||||||||||||||    
T  22709929 gaaccctgtatttcttaggtacatccttagaaggagcttcttgctattgaagcccaaacaacttggtt 22709862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 30788857 - 30788928
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaa 217  Q
    |||||||||||||||||| ||||  |||  | |||||||||||||| | |||||||||| ||||||| ||||    
T  30788857 gcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaa 30788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 3601190 - 3601124
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||||| ||||  |||| | ||||||||||||||  ||| ||||||| |||||||    
T  3601190 gcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactgg 3601124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 33940120 - 33940050
Alignment:
Q  143 tttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggt 213  Q
    ||||| ||||||| |||||| ||||| ||||| | ||||||||||||||  ||||||||||| ||| ||||    
T  33940120 tttgctccggttttcgacccgtcaaagatggacgactaatccggctcgtgtgtagaggcatgcgcaatggt 33940050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 34954628 - 34954694
Alignment:
Q  151 ggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaa 217  Q
    ||||||||||||||||||  |||| | |||||| ||||| | |||||||| ||||||||||| ||||    
T  34954628 ggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaa 34954694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 8612068 - 8612137
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||||||| |  || ||| ||||||  ||||||||||||| | ||||| |||||||||||||||    
T  8612068 tcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggtt 8612137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 10311563 - 10311632
Alignment:
Q  235 tcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||||||||| |  |||||| | ||||  ||||||||||||||| |||||||||| |||| |||||    
T  10311563 tcgaacccggtattccccggatacgttcttggaaggagctccttgctactggagcccaagcaacatggtt 10311632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 19230684 - 19230721
Alignment:
Q  268 aggagctccttgctagtggagcccaaacaacttggttg 305  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  19230684 aggagctccttgccactggagcccaaacaacttggttg 19230721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 32157172 - 32157241
Alignment:
Q  147 caccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaa 216  Q
    |||||||||| || ||| |||| ||||||| |||||| ||||| | |||||||| ||| |||||||||||    
T  32157172 caccggtttctgatccaccaaagatggatgactaatctggctcatgcgtagaggtatgcgcactggtcaa 32157241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 9366457 - 9366493
Alignment:
Q  176 gtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||||||| |||||||||||| |||||||    
T  9366457 gtctaatccggctcgtgcgtagaggcatgcgcactgg 9366493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 29444775 - 29444835
Alignment:
Q  152 gtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactgg 212  Q
    |||||||||||| |||| |||||   |||||||||||| | |||||||||||| |||||||    
T  29444775 gtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactgg 29444835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 224422 - 224351
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaa 217  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||| |||||||| |||||||||| |||||    
T  224422 gcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactgatcaaa 224351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 186621 - 186557
Alignment:
Q  147 caccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactg 211  Q
    |||||||||||||||||  ||| ||| | | |||||||||||||| |||||||||||||||||||    
T  186621 caccggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcactg 186557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 304
Target Start/End: Complemental strand, 9945 - 9791
Alignment:
Q  151 ggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatatt-ttttccctggaagtcgaacccggtattt 249  Q
    |||||| |||||| ||||  |||| | |||||||||||||| |||||||||||| ||||||| |||   || ||  |||||||| ||||| ||||||||     
T  9945 ggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattc 9846  T
Q  250 cttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    ||  ||||||||||||  ||||||||||||  | ||||| | |||||||||||||    
T  9845 ctcagatacatccttggaaggagctccttgtcactggagtcaaaacaacttggtt 9791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 306
Target Start/End: Complemental strand, 41147 - 40988
Alignment:
Q  148 accggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctgga-agtcgaacccggta 246  Q
    ||||||||||||| || |||| ||||  | |||||||||||||| ||||||||||||  |||||  ||| | || || |||| || | ||||||||| ||    
T  41147 accggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaacccgata 41048  T
Q  247 tttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggttgt 306  Q
    || | ||  ||| ||| ||  ||||||||||||| | |||||||||||||||||||||||    
T  41047 ttccctgagtacgtccatggaaggagctccttgccactggagcccaaacaacttggttgt 40988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 301
Target Start/End: Complemental strand, 15361 - 15280
Alignment:
Q  220 ttttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttg 301  Q
    ||||| |||||||| |||||||||||||| |  || ||| ||||||| ||||||||||||| | | ||||||||||||||||    
T  15361 tttttcccctggaaatcgaacccggtattccccgggtacttccttgtaaggagctccttgccactagagcccaaacaacttg 15280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 298
Target Start/End: Original strand, 94980 - 95136
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaata-tggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaac 240  Q
    |||||||||| ||||||||||| |||||  |||  | |||||||||||| | |||| ||||||| ||||||||||||  || ||| ||| ||| ||||||    
T  94980 ttttgcaccgatttccgacccaccaaatggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgttt-cctagaaatcgaac 95078  T
Q  241 ccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaac 298  Q
    | |||||| |  |||||| | ||||  ||||||||||||| | |||||||||| ||||    
T  95079 ctggtattccccggatactttcttggaaggagctccttgccattggagcccaagcaac 95136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 304
Target Start/End: Complemental strand, 12646 - 12521
Alignment:
Q  178 ctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccctggaagtcgaacccggtatttcttggatacatccttgttaggagctcct 277  Q
    |||||||| ||| | |||||||||||| |||||||||||   || || ||  |||| ||||||||||||||||| |  ||| ||||||  || |||||||    
T  12646 ctaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttccctaggaa-tcgaacccggtatttctcgagtacgtccttggaagtagctcct 12548  T
Q  278 tgctagtggagcccaaacaacttggtt 304  Q
    ||| | | |||||||||||||||||||    
T  12547 tgccactagagcccaaacaacttggtt 12521  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 8823 - 8875
Alignment:
Q  254 gatacatccttgttaggagctccttgctagtggagcccaaacaacttggttgt 306  Q
    ||||| ||||||  ||||||||||||| | |||||||||||||||||||||||    
T  8823 gatacgtccttggaaggagctccttgccactggagcccaaacaacttggttgt 8875  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 219478 - 219403
Alignment:
Q  142 ttttgcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaa 217  Q
    |||||||||||||| ||| ||||||||  |||| | ||||||| | |||| |||||||||||| ||||||| ||||    
T  219478 ttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaaa 219403  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 17491 - 17413
Alignment:
Q  150 cggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcactggtcaaatattttttccc 228  Q
    ||||||||||||||||||   |||  | ||||||||||||||  ||||| ||||| |||||||||||  ||||||||||    
T  17491 cggtttccgacccatcaatggtgggcgactaatccggctcgtgtgtagaagcatgcgcactggtcaagcattttttccc 17413  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 26288 - 26230
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatg 204  Q
    |||| |||||||||| |||||| | |||| | |||||||||||||| ||||||||||||    
T  26288 gcactggtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatg 26230  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 304
Target Start/End: Complemental strand, 68541 - 68463
Alignment:
Q  226 ccctggaagtcgaacccggtatttcttggatacatccttgttaggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||| | ||||||||| ||||||  || ||| ||||||  ||||||||||||| | | |||||||||||||||||||    
T  68541 ccctgggaatcgaacccgatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 68463  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 304
Target Start/End: Original strand, 25911 - 25947
Alignment:
Q  268 aggagctccttgctagtggagcccaaacaacttggtt 304  Q
    |||||||| |||||| |||||||||||||||||||||    
T  25911 aggagctctttgctactggagcccaaacaacttggtt 25947  T

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Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 155715 - 155779
Alignment:
Q  146 gcaccggtttccgacccatcaaatatggatgtctaatccggctcgtacgtagaggcatgtgcact 210  Q
    ||||||| |||||||||| ||||  |||  | |||||||||||||| |||||||||||| |||||    
T  155715 gcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcact 155779  T

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